Pregenerated sensors for FRK (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019779Ensembl transcript IDs: ENSMUST00000019913.15, ENSMUST00000170771.3
Found 152 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGTCTTCTTAAATATAAGAGAACAAGGAGCCTCACTTACCACTGGTaGCCACCTGTGACTAGTGGAACACAGAAAATGCTTGTGGTAGAT | + |
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Preference number: 1 (lower is better) Translates to: CLLKYKRTRSLTYHW*PPVTSGTQKMLVVD Trigger: ATCTACCACAAGCATTTTCTGTGTTCCACTAGTCACAGGTGGCCACCAGTGGTAAGTGAGGCTCCTTGTTCTCTTATATTTAAGAAGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019913.15 |
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| 3UTR CCA 90 bp | TTTTGTCTTCTTAAATATAAGAGAACAAGGAGCCTCACTTACCACTaGTGGCCACCTGTGACTAGTGGAACACAGAAAATGCTTGTGGTA | + |
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Preference number: 1 (lower is better) Translates to: FCLLKYKRTRSLTYH*WPPVTSGTQKMLVV Trigger: TACCACAAGCATTTTCTGTGTTCCACTAGTCACAGGTGGCCACCAGTGGTAAGTGAGGCTCCTTGTTCTCTTATATTTAAGAAGACAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019913.15 |
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| 3UTR GCA 90 bp | ATAGGCCTGCATGCCAAAGAAACTTTTTATTATTACTTAGAAAGCTaGAGCAATCCTCTAGCTCTCTCTGTTAGCTTCTCTAAGCCACTT | + |
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Preference number: 1 (lower is better) Translates to: IGLHAKETFYYYLES*SNPLALSVSFSKPL Trigger: AAGTGGCTTAGAGAAGCTAACAGAGAGAGCTAGAGGATTGCTGCAGCTTTCTAAGTAATAATAAAAAGTTTCTTTGGCATGCAGGCCTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
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| 3UTR GCA 90 bp | TGTGGTAGTTCCCCTATATTCCCATACATAACAATTCATCGGCTTTaGAACCTGATTCCTGACATTAAGAGATTAAAACTAATGCAGATG | + |
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Preference number: 1 (lower is better) Translates to: CGSSPIFPYITIHRL*NLIPDIKRLKLMQM Trigger: CATCTGCATTAGTTTTAATCTCTTAATGTCAGGAATCAGGTTGCAAAGCCGATGAATTGTTATGTATGGGAATATAGGGGAACTACCACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
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| 3UTR TCA 90 bp | ATTCCTGACATTAAGAGATTAAAACTAATGCAGATGATTCTCCAATaGCACATACTGAGGTATAGAGCAAACTCCATCATTTCCTTCTAC | + |
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Preference number: 1 (lower is better) Translates to: IPDIKRLKLMQMILQ*HILRYRANSIISFY Trigger: GTAGAAGGAAATGATGGAGTTTGCTCTATACCTCAGTATGTGTCATTGGAGAATCATCTGCATTAGTTTTAATCTCTTAATGTCAGGAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
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| 3UTR CAA 90 bp | AACATCCACTGTGCTGATTGTTGTCCATTAGCCACAGGACTGTGTTaGCAATCTGCTTCCTCCCCCTCAAATGGGAATGGGATGTTGGTT | + |
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Preference number: 2 (lower is better) Translates to: NIHCADCCPLATGLC*QSASSPSNGNGMLV Trigger: AACCAACATCCCATTCCCATTTGAGGGGGAGGAAGCAGATTGCAAACACAGTCCTGTGGCTAATGGACAACAATCAGCACAGTGGATGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019913.15 |
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| 3UTR CAA 90 bp | CTGTGTTTGCAATCTGCTTCCTCCCCCTCAAATGGGAATGGGATGTaGGTTTGTGTGTGTGTGTTTAACAAGCTTGGGATAATGCCTAAG | + |
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Preference number: 2 (lower is better) Translates to: LCLQSASSPSNGNGM*VCVCVFNKLGIMPK Trigger: CTTAGGCATTATCCCAAGCTTGTTAAACACACACACACAAACCAACATCCCATTCCCATTTGAGGGGGAGGAAGCAGATTGCAAACACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019913.15 |
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| 3UTR-3UTR GCA 90 bp | CTGTTAGCTTCTCTAAGCCACTTTAATATCTATTTCTCAGACCTGGTAGGCAATTCAAAGCACAGGTCCTaGTGTGCAGCAGAGCAATCA | + |
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Preference number: 2 (lower is better) Translates to: LLASLSHFNIYFSDLVGNSKHRS*CAAEQS Trigger: TGATTGCTCTGCTGCACAGCAGGACCTGTGCTTTGA...ATTGCCTACCAGGTCTGAGAAATAGATATTAAAGTGGCTTAGAGAAGCTAACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
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| 3UTR-3UTR TCA 90 bp | AAGTTAATTGATCCTGGAAAACTCAGCCCATTGTGTGCCATGCTATTTCCTAGGTCCAATGACACATACTaGGGTATAGAGCAAACTCCA | + |
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Preference number: 2 (lower is better) Translates to: KLIDPGKLSPLCAMLFPRSNDTY*GIEQTP Trigger: TGGAGTTTGCTCTATACCTCAGTATGTGTCATTGGA...CCTAGGAAATAGCATGGCACACAATGGGCTGAGTTTTCCAGGATCAATTAACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019913.15 |
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| 3UTR-3UTR GCA 90 bp | GATGCAGAACATTTGATACACACATTACCTAAGAAAACAGGGAAGTTCTTCAAGGCACAGGTCCTGCTGTaGAGCAGAGCAATCAAATTC | + |
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Preference number: 2 (lower is better) Translates to: DAEHLIHTLPKKTGKFFKAQVLL*SRAIKF Trigger: GAATTTGATTGCTCTGCTGCACAGCAGGACCTGTGC...CTTGAAGAACTTCCCTGTTTTCTTAGGTAATGTGTGTATCAAATGTTCTGCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
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| 3UTR-3UTR TCA 90 bp | AAGTTAATTGATCCTGGAAAACTCAGCCCATTGTGTGCCATGCTATTTCCTAGGCTGATTGGCCTGTTTTaGAGCCAATTTAAAATAGGC | + |
|
Preference number: 2 (lower is better) Translates to: KLIDPGKLSPLCAMLFPRLIGLF*SQFKIG Trigger: GCCTATTTTAAATTGGCTTCAAAACAGGCCAATCAG...CCTAGGAAATAGCATGGCACACAATGGGCTGAGTTTTCCAGGATCAATTAACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019913.15 |
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| 3UTR-3UTR TCA 90 bp | AAATTTCATTTTAGCCGACTAGCTGTTGAATGTCTTCTCCTTGGTTACATTAGAACTGGTGGCCACCTGTaGCTAGTGGAACACAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: KFHFSRLAVECLLLGYIRTGGHL*LVEHRK Trigger: TTTTCTGTGTTCCACTAGTCACAGGTGGCCACCAGT...TCTAATGTAACCAAGGAGAAGACATTCAACAGCTAGTCGGCTAAAATGAAATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019913.15 |
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| 3UTR-3UTR GCA 90 bp | AAATTTCATTTTAGCCGACTAGCTGTTGAATGTCTTCTCCTTGGTTACATTAGAGCACAGGTCCTGCTGTaGAGCAGAGCAATCAAATTC | + |
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Preference number: 2 (lower is better) Translates to: KFHFSRLAVECLLLGYIRAQVLL*SRAIKF Trigger: GAATTTGATTGCTCTGCTGCACAGCAGGACCTGTGC...TCTAATGTAACCAAGGAGAAGACATTCAACAGCTAGTCGGCTAAAATGAAATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019913.15 |
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| 3UTR-3UTR GCA 90 bp | ACAATAGAAGATTCCAGAATCTATGGAGCTGATTTTAGAAAAGTCTTGCTAACCTCAAAGCACAGGTCCTaGTGTGCAGCAGAGCAATCA | + |
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Preference number: 2 (lower is better) Translates to: TIEDSRIYGADFRKVLLTSKHRS*CAAEQS Trigger: TGATTGCTCTGCTGCACAGCAGGACCTGTGCTTTGA...GGTTAGCAAGACTTTTCTAAAATCAGCTCCATAGATTCTGGAATCTTCTATTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
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| 3UTR-3UTR TCA 90 bp | CATCGGCTTTGCAACCTGATTCCTGACATTAAGAGATTAAAACTAATGCAGATGTGCCACAACAGTAACTaGGTAAACACTGTCATCTGT | + |
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Preference number: 2 (lower is better) Translates to: HRLCNLIPDIKRLKLMQMCHNSN*VNTVIC Trigger: ACAGATGACAGTGTTTACTCAGTTACTGTTGTGGCA...CATCTGCATTAGTTTTAATCTCTTAATGTCAGGAATCAGGTTGCAAAGCCGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
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| 3UTR-3UTR TCA 90 bp | AAGTTAATTGATCCTGGAAAACTCAGCCCATTGTGTGCCATGCTATTTCCTAGGCTCCTAGTTCCTAGTTaGAAGAATTGGCATGTTTTT | + |
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Preference number: 2 (lower is better) Translates to: KLIDPGKLSPLCAMLFPRLLVPS*KNWHVF Trigger: AAAAACATGCCAATTCTTTCAACTAGGAACTAGGAG...CCTAGGAAATAGCATGGCACACAATGGGCTGAGTTTTCCAGGATCAATTAACTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019913.15 |
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| 3UTR-3UTR GCA 90 bp | AAATTTCATTTTAGCCGACTAGCTGTTGAATGTCTTCTCCTTGGTTACATTAGAGCCCATTGTGTGCCATaGTATTTCCTAGGCAAAGGT | + |
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Preference number: 2 (lower is better) Translates to: KFHFSRLAVECLLLGYIRAHCVP*YFLGKG Trigger: ACCTTTGCCTAGGAAATAGCATGGCACACAATGGGC...TCTAATGTAACCAAGGAGAAGACATTCAACAGCTAGTCGGCTAAAATGAAATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019913.15 |
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| 3UTR-3UTR TCA 90 bp | GGTAGTTCCCCTATATTCCCATACATAACAATTCATCGGCTTTGCAACCTGATTGGCAGTGAGGAAAAATaGCACATTATCTTATACTGT | + |
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Preference number: 2 (lower is better) Translates to: GSSPIFPYITIHRLCNLIGSEEK*HIILYC Trigger: ACAGTATAAGATAATGTGTCATTTTTCCTCACTGCC...AATCAGGTTGCAAAGCCGATGAATTGTTATGTATGGGAATATAGGGGAACTACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
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| 3UTR-3UTR TCA 90 bp | CTGTTAGCTTCTCTAAGCCACTTTAATATCTATTTCTCAGACCTGGTAGGCAATCAGATGATTCTCCAATaGCACATACTGAGGTATAGA | + |
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Preference number: 2 (lower is better) Translates to: LLASLSHFNIYFSDLVGNQMILQ*HILRYR Trigger: TCTATACCTCAGTATGTGTCATTGGAGAATCATCTG...ATTGCCTACCAGGTCTGAGAAATAGATATTAAAGTGGCTTAGAGAAGCTAACAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
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| 3UTR-3UTR TCA 90 bp | CATCGGCTTTGCAACCTGATTCCTGACATTAAGAGATTAAAACTAATGCAGATGGTTCATCCTACCACTTaGATATGTCAAAATAAGCTG | + |
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Preference number: 2 (lower is better) Translates to: HRLCNLIPDIKRLKLMQMVHPTT*ICQNKL Trigger: CAGCTTATTTTGACATATTCAAGTGGTAGGATGAAC...CATCTGCATTAGTTTTAATCTCTTAATGTCAGGAATCAGGTTGCAAAGCCGATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
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| 3UTR-3UTR TCA 90 bp | AAATTTCATTTTAGCCGACTAGCTGTTGAATGTCTTCTCCTTGGTTACATTAGATGCCACAACAGTAACTaGGTAAACACTGTCATCTGT | + |
|
Preference number: 2 (lower is better) Translates to: KFHFSRLAVECLLLGYIRCHNSN*VNTVIC Trigger: ACAGATGACAGTGTTTACTCAGTTACTGTTGTGGCA...TCTAATGTAACCAAGGAGAAGACATTCAACAGCTAGTCGGCTAAAATGAAATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019913.15 |
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| 3UTR-3UTR TCA 90 bp | ATCCATTTTGTCTTCTTAAATATAAGAGAACAAGGAGCCTCACTTACCACTGGTCAGATGATTCTCCAATaGCACATACTGAGGTATAGA | + |
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Preference number: 2 (lower is better) Translates to: IHFVFLNIREQGASLTTGQMILQ*HILRYR Trigger: TCTATACCTCAGTATGTGTCATTGGAGAATCATCTG...ACCAGTGGTAAGTGAGGCTCCTTGTTCTCTTATATTTAAGAAGACAAAATGGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019913.15 |
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| 3UTR-3UTR TCA 90 bp | GATGCAGAACATTTGATACACACATTACCTAAGAAAACAGGGAAGTTCTTCAAGGTTCATCCTACCACTTaGATATGTCAAAATAAGCTG | + |
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Preference number: 2 (lower is better) Translates to: DAEHLIHTLPKKTGKFFKVHPTT*ICQNKL Trigger: CAGCTTATTTTGACATATTCAAGTGGTAGGATGAAC...CTTGAAGAACTTCCCTGTTTTCTTAGGTAATGTGTGTATCAAATGTTCTGCATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
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| 3UTR-3UTR TCA 90 bp | ATCCATTTTGTCTTCTTAAATATAAGAGAACAAGGAGCCTCACTTACCACTGGTGGCAGTGAGGAAAAATaGCACATTATCTTATACTGT | + |
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Preference number: 2 (lower is better) Translates to: IHFVFLNIREQGASLTTGGSEEK*HIILYC Trigger: ACAGTATAAGATAATGTGTCATTTTTCCTCACTGCC...ACCAGTGGTAAGTGAGGCTCCTTGTTCTCTTATATTTAAGAAGACAAAATGGAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019913.15 |
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| 3UTR-3UTR TCA 90 bp | TGCCAAAGAAACTTTTTATTATTACTTAGAAAGCTGCAGCAATCCTCTAGCTCTGATTTTACCAGGCAGTaGGGAAAAATGACACATTAT | + |
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Preference number: 2 (lower is better) Translates to: CQRNFLLLLRKLQQSSSSDFTRQ*GKMTHY Trigger: ATAATGTGTCATTTTTCCTCACTGCCTGGTAAAATC...AGAGCTAGAGGATTGCTGCAGCTTTCTAAGTAATAATAAAAAGTTTCTTTGGCA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
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| 3UTR CCA 72 bp | CTTAAATATAAGAGAACAAGGAGCCTCACTTACCACTaGTGGCCACCTGTGACTAGTGGAACACAGAAAATG | + |
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Preference number: 3 (lower is better) Translates to: LKYKRTRSLTYH*WPPVTSGTQKM Trigger: CATTTTCTGTGTTCCACTAGTCACAGGTGGCCACCAGTGGTAAGTGAGGCTCCTTGTTCTCTTATATTTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019913.15 |
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| 3UTR GCA 72 bp | ATTGACCTGAGCACAAGTAAGCAAACAAGCAAGTCATaGATGCGTGCATGTAGTTATGTCTCTTTCTCCTCT | + |
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Preference number: 3 (lower is better) Translates to: IDLSTSKQTSKS*MRACSYVSFSS Trigger: AGAGGAGAAAGAGACATAACTACATGCACGCATGCATGACTTGCTTGTTTGCTTACTTGTGCTCAGGTCAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019913.15 |
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| 3UTR-3UTR CAA 90 bp | GGTAGTTCCCCTATATTCCCATACATAACAATTCATCGGCTTTGCAACCTGATTCATCTGTTGATTCTCTaGATGGGCATTCAAACAATA | + |
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Preference number: 3 (lower is better) Translates to: GSSPIFPYITIHRLCNLIHLLIL*MGIQTI Trigger: TATTGTTTGAATGCCCATCAAGAGAATCAACAGATG...AATCAGGTTGCAAAGCCGATGAATTGTTATGTATGGGAATATAGGGGAACTACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
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| 3UTR-3UTR CAA 90 bp | GATGCAGAACATTTGATACACACATTACCTAAGAAAACAGGGAAGTTCTTCAAGAAACACTGTCATCTGTaGATTCTCTTGATGGGCATT | + |
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Preference number: 3 (lower is better) Translates to: DAEHLIHTLPKKTGKFFKKHCHL*ILLMGI Trigger: AATGCCCATCAAGAGAATCAACAGATGACAGTGTTT...CTTGAAGAACTTCCCTGTTTTCTTAGGTAATGTGTGTATCAAATGTTCTGCATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
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| 3UTR-3UTR CAA 90 bp | ATCCATTTTGTCTTCTTAAATATAAGAGAACAAGGAGCCTCACTTACCACTGGTTTCTTTATATTAGACTaGCCTGTGGGCATGTCTGTA | + |
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Preference number: 3 (lower is better) Translates to: IHFVFLNIREQGASLTTGFFILD*PVGMSV Trigger: TACAGACATGCCCACAGGCAAGTCTAATATAAAGAA...ACCAGTGGTAAGTGAGGCTCCTTGTTCTCTTATATTTAAGAAGACAAAATGGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019913.15 |
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| 3UTR GCA 72 bp | TATTTGAATAAACAACTTATCTTGGAGAAGTTCATATaGCCAGCTTCAGTGCAGACTTTCTTCCAAGCCAAT | + |
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Preference number: 3 (lower is better) Translates to: YLNKQLILEKFI*PASVQTFFQAN Trigger: ATTGGCTTGGAAGAAAGTCTGCACTGAAGCTGGGCATATGAACTTCTCCAAGATAAGTTGTTTATTCAAATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019913.15 |
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| 3UTR-3UTR CAA 90 bp | AAATTTCATTTTAGCCGACTAGCTGTTGAATGTCTTCTCCTTGGTTACATTAGAACACAGATTATCTTTTaGATATGGAATGCATGGCTG | + |
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Preference number: 3 (lower is better) Translates to: KFHFSRLAVECLLLGYIRTQIIF*IWNAWL Trigger: CAGCCATGCATTCCATATCAAAAAGATAATCTGTGT...TCTAATGTAACCAAGGAGAAGACATTCAACAGCTAGTCGGCTAAAATGAAATTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019913.15 |
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| 3UTR-3UTR CAA 90 bp | TGTCATCTGTTGATTCTCTTGATGGGCATTCAAACAATAAATAGAAATGTGAGGACACAGATTATCTTTTaGATATGGAATGCATGGCTG | + |
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Preference number: 3 (lower is better) Translates to: CHLLILLMGIQTINRNVRTQIIF*IWNAWL Trigger: CAGCCATGCATTCCATATCAAAAAGATAATCTGTGT...CCTCACATTTCTATTTATTGTTTGAATGCCCATCAAGAGAATCAACAGATGACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
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| 3UTR-3UTR CAA 90 bp | ACAATAGAAGATTCCAGAATCTATGGAGCTGATTTTAGAAAAGTCTTGCTAACCCATCTGTTGATTCTCTaGATGGGCATTCAAACAATA | + |
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Preference number: 3 (lower is better) Translates to: TIEDSRIYGADFRKVLLTHLLIL*MGIQTI Trigger: TATTGTTTGAATGCCCATCAAGAGAATCAACAGATG...GGTTAGCAAGACTTTTCTAAAATCAGCTCCATAGATTCTGGAATCTTCTATTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
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| 3UTR TCA 72 bp | AATGTCTTCTCCTTGGTTACATTAGACCAGATAATCTaGAACAAACAATTGAAGCTACTACTTGCTCTGTCA | + |
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Preference number: 3 (lower is better) Translates to: NVFSLVTLDQII*NKQLKLLLALS Trigger: TGACAGAGCAAGTAGTAGCTTCAATTGTTTGTTTCAGATTATCTGGTCTAATGTAACCAAGGAGAAGACATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019913.15 |
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| 3UTR GCA 72 bp | TCCCCTATATTCCCATACATAACAATTCATCGGCTTTaGAACCTGATTCCTGACATTAAGAGATTAAAACTA | + |
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Preference number: 3 (lower is better) Translates to: SPIFPYITIHRL*NLIPDIKRLKL Trigger: TAGTTTTAATCTCTTAATGTCAGGAATCAGGTTGCAAAGCCGATGAATTGTTATGTATGGGAATATAGGGGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
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| CDS-3UTR TCA 90 bp | GGTAGTTCCCCTATATTCCCATACATAACAATTCATCGGCTTTGCAACCTGATTTCTCTCGGGCTCTTGTaGCCTGGGAGCCTCTGGGGG | + |
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Preference number: 4 (lower is better) Translates to: GSSPIFPYITIHRLCNLISLGLL*PGSLWG Trigger: CCCCCAGAGGCTCCCAGGTCACAAGAGCCCGAGAGA...AATCAGGTTGCAAAGCCGATGAATTGTTATGTATGGGAATATAGGGGAACTACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
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| CDS-3UTR TCA 90 bp | CATCGGCTTTGCAACCTGATTCCTGACATTAAGAGATTAAAACTAATGCAGATGTCTCTCGGGCTCTTGTaGCCTGGGAGCCTCTGGGGG | + |
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Preference number: 4 (lower is better) Translates to: HRLCNLIPDIKRLKLMQMSLGLL*PGSLWG Trigger: CCCCCAGAGGCTCCCAGGTCACAAGAGCCCGAGAGA...CATCTGCATTAGTTTTAATCTCTTAATGTCAGGAATCAGGTTGCAAAGCCGATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
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| 3UTR CAA 72 bp | TGTGCTGATTGTTGTCCATTAGCCACAGGACTGTGTTaGCAATCTGCTTCCTCCCCCTCAAATGGGAATGGG | + |
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Preference number: 4 (lower is better) Translates to: CADCCPLATGLC*QSASSPSNGNG Trigger: CCCATTCCCATTTGAGGGGGAGGAAGCAGATTGCAAACACAGTCCTGTGGCTAATGGACAACAATCAGCACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019913.15 |
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| CDS-3UTR CCA 90 bp | TGTCATCTGTTGATTCTCTTGATGGGCATTCAAACAATAAATAGAAATGTGAGGCGGGCTCTTGTGACCTaGGAGCCTCTGGGGGACAGA | + |
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Preference number: 4 (lower is better) Translates to: CHLLILLMGIQTINRNVRRALVT*EPLGDR Trigger: TCTGTCCCCCAGAGGCTCCCAGGTCACAAGAGCCCG...CCTCACATTTCTATTTATTGTTTGAATGCCCATCAAGAGAATCAACAGATGACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
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| CDS-3UTR CCA 90 bp | TGCCAAAGAAACTTTTTATTATTACTTAGAAAGCTGCAGCAATCCTCTAGCTCTCGGGCTCTTGTGACCTaGGAGCCTCTGGGGGACAGA | + |
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Preference number: 4 (lower is better) Translates to: CQRNFLLLLRKLQQSSSSRALVT*EPLGDR Trigger: TCTGTCCCCCAGAGGCTCCCAGGTCACAAGAGCCCG...AGAGCTAGAGGATTGCTGCAGCTTTCTAAGTAATAATAAAAAGTTTCTTTGGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
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| CDS-3UTR GCA 90 bp | CTGTTAGCTTCTCTAAGCCACTTTAATATCTATTTCTCAGACCTGGTAGGCAATACGAATGGCTTCGGGTaGAGTCCACTTCACTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: LLASLSHFNIYFSDLVGNTNGFG*SPLHWQ Trigger: CTGCCAGTGAAGTGGACTGCACCCGAAGCCATTCGT...ATTGCCTACCAGGTCTGAGAAATAGATATTAAAGTGGCTTAGAGAAGCTAACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
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| 3UTR CAA 72 bp | CAATCTGCTTCCTCCCCCTCAAATGGGAATGGGATGTaGGTTTGTGTGTGTGTGTTTAACAAGCTTGGGATA | + |
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Preference number: 4 (lower is better) Translates to: QSASSPSNGNGM*VCVCVFNKLGI Trigger: TATCCCAAGCTTGTTAAACACACACACACAAACCAACATCCCATTCCCATTTGAGGGGGAGGAAGCAGATTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019913.15 |
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| CDS-3UTR TCA 90 bp | GGTAGTTCCCCTATATTCCCATACATAACAATTCATCGGCTTTGCAACCTGATTCAAACTTCTCCAAACTaGCCAGATCCCAGTCGCTTC | + |
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Preference number: 4 (lower is better) Translates to: GSSPIFPYITIHRLCNLIQTSPN*PDPSRF Trigger: GAAGCGACTGGGATCTGGTCAGTTTGGAGAAGTTTG...AATCAGGTTGCAAAGCCGATGAATTGTTATGTATGGGAATATAGGGGAACTACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
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| CDS-3UTR GCA 90 bp | GGTAGTTCCCCTATATTCCCATACATAACAATTCATCGGCTTTGCAACCTGATTAAAAGGCTGCAGGTATaGCCAGAGTCTCACACAGAC | + |
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Preference number: 4 (lower is better) Translates to: GSSPIFPYITIHRLCNLIKRLQV*PESHTD Trigger: GTCTGTGTGAGACTCTGGGCATACCTGCAGCCTTTT...AATCAGGTTGCAAAGCCGATGAATTGTTATGTATGGGAATATAGGGGAACTACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
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| CDS-3UTR GCA 90 bp | AAGTTAATTGATCCTGGAAAACTCAGCCCATTGTGTGCCATGCTATTTCCTAGGGTCCTCTGCAGTACGTaGTTGGTAATCAAACAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KLIDPGKLSPLCAMLFPRVLCST*LVIKQS Trigger: GCTCTGTTTGATTACCAAGCACGTACTGCAGAGGAC...CCTAGGAAATAGCATGGCACACAATGGGCTGAGTTTTCCAGGATCAATTAACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019913.15 |
||
| CDS-3UTR GCA 90 bp | ATCCATTTTGTCTTCTTAAATATAAGAGAACAAGGAGCCTCACTTACCACTGGTTCCAGAAGCCACCTGTaGCGCCATGTCTACCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: IHFVFLNIREQGASLTTGSRSHL*RHVYLL Trigger: CAACAGGTAGACATGGCGGCACAGGTGGCTTCTGGA...ACCAGTGGTAAGTGAGGCTCCTTGTTCTCTTATATTTAAGAAGACAAAATGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019913.15 |
||
| CDS-3UTR CCA 90 bp | GGTAGTTCCCCTATATTCCCATACATAACAATTCATCGGCTTTGCAACCTGATTCCTCCGCCACGTAATTaGAAGGAATGTAGCCCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: GSSPIFPYITIHRLCNLIPPPRN*KECSPV Trigger: TACAGGGCTACATTCCTTCCAATTACGTGGCGGAGG...AATCAGGTTGCAAAGCCGATGAATTGTTATGTATGGGAATATAGGGGAACTACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| 3UTR CAA 72 bp | GCTTCAGTGCAGACTTTCTTCCAAGCCAATCAACACTaGGCATTAACATCCACTGTGCTGATTGTTGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: ASVQTFFQANQH*ALTSTVLIVVH Trigger: ATGGACAACAATCAGCACAGTGGATGTTAATGCCAAGTGTTGATTGGCTTGGAAGAAAGTCTGCACTGAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019913.15 |
||
| CDS-3UTR GCA 90 bp | AAATTTCATTTTAGCCGACTAGCTGTTGAATGTCTTCTCCTTGGTTACATTAGACACGGGAGAAAAGGCTaGAGGTATGCCCAGAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KFHFSRLAVECLLLGYIRHGRKG*RYAQSL Trigger: GAGACTCTGGGCATACCTGCAGCCTTTTCTCCCGTG...TCTAATGTAACCAAGGAGAAGACATTCAACAGCTAGTCGGCTAAAATGAAATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019913.15 |
||
| CDS-3UTR GCA 90 bp | TGCCAAAGAAACTTTTTATTATTACTTAGAAAGCTGCAGCAATCCTCTAGCTCTCACGGGAGAAAAGGCTaGAGGTATGCCCAGAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CQRNFLLLLRKLQQSSSSHGRKG*RYAQSL Trigger: GAGACTCTGGGCATACCTGCAGCCTTTTCTCCCGTG...AGAGCTAGAGGATTGCTGCAGCTTTCTAAGTAATAATAAAAAGTTTCTTTGGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS-3UTR GCA 90 bp | TGTCATCTGTTGATTCTCTTGATGGGCATTCAAACAATAAATAGAAATGTGAGGTCCAGAAGCCACCTGTaGCGCCATGTCTACCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: CHLLILLMGIQTINRNVRSRSHL*RHVYLL Trigger: CAACAGGTAGACATGGCGGCACAGGTGGCTTCTGGA...CCTCACATTTCTATTTATTGTTTGAATGCCCATCAAGAGAATCAACAGATGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS-3UTR GCA 90 bp | TGTCATCTGTTGATTCTCTTGATGGGCATTCAAACAATAAATAGAAATGTGAGGACGAATGGCTTCGGGTaGAGTCCACTTCACTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CHLLILLMGIQTINRNVRTNGFG*SPLHWQ Trigger: CTGCCAGTGAAGTGGACTGCACCCGAAGCCATTCGT...CCTCACATTTCTATTTATTGTTTGAATGCCCATCAAGAGAATCAACAGATGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS-3UTR CCA 90 bp | TGTCATCTGTTGATTCTCTTGATGGGCATTCAAACAATAAATAGAAATGTGAGGGAAGTGTCCAAGACTTaGAGTTTGTCGCCGGCACGG | + |
|
Preference number: 4 (lower is better) Translates to: CHLLILLMGIQTINRNVREVSKT*SLSPAR Trigger: CCGTGCCGGCGACAAACTCCAAGTCTTGGACACTTC...CCTCACATTTCTATTTATTGTTTGAATGCCCATCAAGAGAATCAACAGATGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS-3UTR CCA 90 bp | CATCGGCTTTGCAACCTGATTCCTGACATTAAGAGATTAAAACTAATGCAGATGTCTTCTCCAAATGTCTaGCCAACCACCAGCCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: HRLCNLIPDIKRLKLMQMSSPNV*PTTSPH Trigger: ATGAGGGCTGGTGGTTGGCCAGACATTTGGAGAAGA...CATCTGCATTAGTTTTAATCTCTTAATGTCAGGAATCAGGTTGCAAAGCCGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS-3UTR CCA 90 bp | CATCGGCTTTGCAACCTGATTCCTGACATTAAGAGATTAAAACTAATGCAGATGCCTCCGCCACGTAATTaGAAGGAATGTAGCCCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: HRLCNLIPDIKRLKLMQMPPPRN*KECSPV Trigger: TACAGGGCTACATTCCTTCCAATTACGTGGCGGAGG...CATCTGCATTAGTTTTAATCTCTTAATGTCAGGAATCAGGTTGCAAAGCCGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS-3UTR CCA 90 bp | GGTAGTTCCCCTATATTCCCATACATAACAATTCATCGGCTTTGCAACCTGATTCTGTGGGCAGTTAGATaGCTGTGGAAGTCTGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: GSSPIFPYITIHRLCNLILWAVR*LWKSVV Trigger: AACTACAGACTTCCACAGCCATCTAACTGCCCACAG...AATCAGGTTGCAAAGCCGATGAATTGTTATGTATGGGAATATAGGGGAACTACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS-3UTR CCA 90 bp | CATCGGCTTTGCAACCTGATTCCTGACATTAAGAGATTAAAACTAATGCAGATGCAGGGTCTCAAATGTTaGCCGTTGCTTAGGCTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: HRLCNLIPDIKRLKLMQMQGLKC*PLLRLN Trigger: GTTGAGCCTAAGCAACGGCCAACATTTGAGACCCTG...CATCTGCATTAGTTTTAATCTCTTAATGTCAGGAATCAGGTTGCAAAGCCGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS-3UTR TCA 90 bp | GATGCAGAACATTTGATACACACATTACCTAAGAAAACAGGGAAGTTCTTCAAGAGACTTTCCTCCTGGTaGGGAAGAAGCCACCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: DAEHLIHTLPKKTGKFFKRLSSW*GRSHLH Trigger: ATGAAGGTGGCTTCTTCCTCACCAGGAGGAAAGTCT...CTTGAAGAACTTCCCTGTTTTCTTAGGTAATGTGTGTATCAAATGTTCTGCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS-3UTR GCA 90 bp | TGCCAAAGAAACTTTTTATTATTACTTAGAAAGCTGCAGCAATCCTCTAGCTCTAACCACCAGCCCTCATaGGAAGTGTCCAAGACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: CQRNFLLLLRKLQQSSSSNHQPS*EVSKTW Trigger: CCAAGTCTTGGACACTTCGCATGAGGGCTGGTGGTT...AGAGCTAGAGGATTGCTGCAGCTTTCTAAGTAATAATAAAAAGTTTCTTTGGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS-3UTR GCA 90 bp | TGTCATCTGTTGATTCTCTTGATGGGCATTCAAACAATAAATAGAAATGTGAGGAACCACCAGCCCTCATaGGAAGTGTCCAAGACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: CHLLILLMGIQTINRNVRNHQPS*EVSKTW Trigger: CCAAGTCTTGGACACTTCGCATGAGGGCTGGTGGTT...CCTCACATTTCTATTTATTGTTTGAATGCCCATCAAGAGAATCAACAGATGACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS-3UTR GCA 90 bp | TGTCTCTTTCTCCTCTTAGACTGTGGATGTGATGAAATCATTTTCAAGCTCTCTAAAGCTGTATGGAGTTaGGGTCTATCTCCCACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: CLFLLLDCGCDEIIFKLSKAVWS*GLSPTG Trigger: ACCAGTGGGAGATAGACCGCAACTCCATACAGCTTT...AGAGAGCTTGAAAATGATTTCATCACATCCACAGTCTAAGAGGAGAAAGAGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019913.15 |
||
| CDS-3UTR CCA 90 bp | TGCCAAAGAAACTTTTTATTATTACTTAGAAAGCTGCAGCAATCCTCTAGCTCTAGAGCCACAAAATACTaGCCATGGCTTCTCTCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CQRNFLLLLRKLQQSSSSRATKY*PWLLSG Trigger: GCCCGAGAGAAGCCATGGCCAGTATTTTGTGGCTCT...AGAGCTAGAGGATTGCTGCAGCTTTCTAAGTAATAATAAAAAGTTTCTTTGGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS-3UTR CCA 90 bp | ACAATAGAAGATTCCAGAATCTATGGAGCTGATTTTAGAAAAGTCTTGCTAACCAGAGCCACAAAATACTaGCCATGGCTTCTCTCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TIEDSRIYGADFRKVLLTRATKY*PWLLSG Trigger: GCCCGAGAGAAGCCATGGCCAGTATTTTGTGGCTCT...GGTTAGCAAGACTTTTCTAAAATCAGCTCCATAGATTCTGGAATCTTCTATTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS-3UTR CCA 90 bp | TGTCTCTTTCTCCTCTTAGACTGTGGATGTGATGAAATCATTTTCAAGCTCTCTGCTTCAAAAGCTGTATaGAGTTGCGGTCTATCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: CLFLLLDCGCDEIIFKLSASKAV*SCGLSP Trigger: GGGAGATAGACCGCAACTCCATACAGCTTTTGAAGC...AGAGAGCTTGAAAATGATTTCATCACATCCACAGTCTAAGAGGAGAAAGAGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019913.15 |
||
| CDS-3UTR CCA 90 bp | CATCGGCTTTGCAACCTGATTCCTGACATTAAGAGATTAAAACTAATGCAGATGCTGTGGGCAGTTAGATaGCTGTGGAAGTCTGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: HRLCNLIPDIKRLKLMQMLWAVR*LWKSVV Trigger: AACTACAGACTTCCACAGCCATCTAACTGCCCACAG...CATCTGCATTAGTTTTAATCTCTTAATGTCAGGAATCAGGTTGCAAAGCCGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS-3UTR CCA 90 bp | GATGCAGAACATTTGATACACACATTACCTAAGAAAACAGGGAAGTTCTTCAAGGCTGTAGAATTGCTGTaGGCAGTTAGATGGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: DAEHLIHTLPKKTGKFFKAVELL*AVRWLW Trigger: CCACAGCCATCTAACTGCCCACAGCAATTCTACAGC...CTTGAAGAACTTCCCTGTTTTCTTAGGTAATGTGTGTATCAAATGTTCTGCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS-3UTR TCA 90 bp | TGTCATCTGTTGATTCTCTTGATGGGCATTCAAACAATAAATAGAAATGTGAGGAGACTTTCCTCCTGGTaGGGAAGAAGCCACCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: CHLLILLMGIQTINRNVRRLSSW*GRSHLH Trigger: ATGAAGGTGGCTTCTTCCTCACCAGGAGGAAAGTCT...CCTCACATTTCTATTTATTGTTTGAATGCCCATCAAGAGAATCAACAGATGACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS-3UTR TCA 90 bp | TGTCATCTGTTGATTCTCTTGATGGGCATTCAAACAATAAATAGAAATGTGAGGCAAACTTCTCCAAACTaGCCAGATCCCAGTCGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CHLLILLMGIQTINRNVRQTSPN*PDPSRF Trigger: GAAGCGACTGGGATCTGGTCAGTTTGGAGAAGTTTG...CCTCACATTTCTATTTATTGTTTGAATGCCCATCAAGAGAATCAACAGATGACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS-3UTR GCA 90 bp | TGCCAAAGAAACTTTTTATTATTACTTAGAAAGCTGCAGCAATCCTCTAGCTCTAAAAGGCTGCAGGTATaGCCAGAGTCTCACACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: CQRNFLLLLRKLQQSSSSKRLQV*PESHTD Trigger: GTCTGTGTGAGACTCTGGGCATACCTGCAGCCTTTT...AGAGCTAGAGGATTGCTGCAGCTTTCTAAGTAATAATAAAAAGTTTCTTTGGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS-3UTR CCA 90 bp | AAATTTCATTTTAGCCGACTAGCTGTTGAATGTCTTCTCCTTGGTTACATTAGATCTTCTCCAAATGTCTaGCCAACCACCAGCCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KFHFSRLAVECLLLGYIRSSPNV*PTTSPH Trigger: ATGAGGGCTGGTGGTTGGCCAGACATTTGGAGAAGA...TCTAATGTAACCAAGGAGAAGACATTCAACAGCTAGTCGGCTAAAATGAAATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019913.15 |
||
| CDS-3UTR CCA 90 bp | CATCGGCTTTGCAACCTGATTCCTGACATTAAGAGATTAAAACTAATGCAGATGAGAAAGGCGCCCGTCTaGTTTTCTGAATACAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: HRLCNLIPDIKRLKLMQMRKAPV*FSEYRS Trigger: ACTTCTGTATTCAGAAAACCAGACGGGCGCCTTTCT...CATCTGCATTAGTTTTAATCTCTTAATGTCAGGAATCAGGTTGCAAAGCCGATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS-3UTR CCA 90 bp | CATCGGCTTTGCAACCTGATTCCTGACATTAAGAGATTAAAACTAATGCAGATGGCCCGTCACTTGTTGTaGTGTAGTAGTTCACGAATT | + |
|
Preference number: 4 (lower is better) Translates to: HRLCNLIPDIKRLKLMQMARHLL*CSSSRI Trigger: AATTCGTGAACTACTACACCACAACAAGTGACGGGC...CATCTGCATTAGTTTTAATCTCTTAATGTCAGGAATCAGGTTGCAAAGCCGATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS-3UTR CCA 90 bp | TGTCTCTTTCTCCTCTTAGACTGTGGATGTGATGAAATCATTTTCAAGCTCTCTTTACGGCCACTGGAGTaGTATTATTCCACAGACCTT | + |
|
Preference number: 4 (lower is better) Translates to: CLFLLLDCGCDEIIFKLSLRPLE*YYSTDL Trigger: AAGGTCTGTGGAATAATACCACTCCAGTGGCCGTAA...AGAGAGCTTGAAAATGATTTCATCACATCCACAGTCTAAGAGGAGAAAGAGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019913.15 |
||
| CDS-3UTR CCA 90 bp | CTGTTAGCTTCTCTAAGCCACTTTAATATCTATTTCTCAGACCTGGTAGGCAATTTACGGCCACTGGAGTaGTATTATTCCACAGACCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLASLSHFNIYFSDLVGNLRPLE*YYSTDL Trigger: AAGGTCTGTGGAATAATACCACTCCAGTGGCCGTAA...ATTGCCTACCAGGTCTGAGAAATAGATATTAAAGTGGCTTAGAGAAGCTAACAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS-3UTR CCA 90 bp | GGTAGTTCCCCTATATTCCCATACATAACAATTCATCGGCTTTGCAACCTGATTGCAGTTAGATGGCTGTaGAAGTCTGTAGTTTTGACT | + |
|
Preference number: 4 (lower is better) Translates to: GSSPIFPYITIHRLCNLIAVRWL*KSVVLT Trigger: AGTCAAAACTACAGACTTCCACAGCCATCTAACTGC...AATCAGGTTGCAAAGCCGATGAATTGTTATGTATGGGAATATAGGGGAACTACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS-3UTR CCA 90 bp | ACAATAGAAGATTCCAGAATCTATGGAGCTGATTTTAGAAAAGTCTTGCTAACCGCTGTAGAATTGCTGTaGGCAGTTAGATGGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TIEDSRIYGADFRKVLLTAVELL*AVRWLW Trigger: CCACAGCCATCTAACTGCCCACAGCAATTCTACAGC...GGTTAGCAAGACTTTTCTAAAATCAGCTCCATAGATTCTGGAATCTTCTATTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS-3UTR TCA 90 bp | CTGTTAGCTTCTCTAAGCCACTTTAATATCTATTTCTCAGACCTGGTAGGCAATGAATTCATTCAGGGTTaGAAAGACTTTCCTCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LLASLSHFNIYFSDLVGNEFIQG*KDFPPG Trigger: ACCAGGAGGAAAGTCTTTTCAACCCTGAATGAATTC...ATTGCCTACCAGGTCTGAGAAATAGATATTAAAGTGGCTTAGAGAAGCTAACAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS-3UTR TCA 90 bp | AAGTTAATTGATCCTGGAAAACTCAGCCCATTGTGTGCCATGCTATTTCCTAGGAATCAAATGGATTTTTaGCCCACCATCATTTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KLIDPGKLSPLCAMLFPRNQMDF*PTIILE Trigger: CTCCAAAATGATGGTGGGTCAAAAATCCATTTGATT...CCTAGGAAATAGCATGGCACACAATGGGCTGAGTTTTCCAGGATCAATTAACTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000019913.15 |
||
| CDS-3UTR GCA 90 bp | ACAATAGAAGATTCCAGAATCTATGGAGCTGATTTTAGAAAAGTCTTGCTAACCAAAGCTGTATGGAGTTaGGGTCTATCTCCCACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TIEDSRIYGADFRKVLLTKAVWS*GLSPTG Trigger: ACCAGTGGGAGATAGACCGCAACTCCATACAGCTTT...GGTTAGCAAGACTTTTCTAAAATCAGCTCCATAGATTCTGGAATCTTCTATTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS-3UTR GCA 90 bp | GGTAGTTCCCCTATATTCCCATACATAACAATTCATCGGCTTTGCAACCTGATTAACAAGGACATTTCTTaGAGCCAGATCTCTGTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: GSSPIFPYITIHRLCNLINKDIS*SQISVN Trigger: ATTCACAGAGATCTGGCTGCAAGAAATGTCCTTGTT...AATCAGGTTGCAAAGCCGATGAATTGTTATGTATGGGAATATAGGGGAACTACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS-3UTR GCA 90 bp | CTGTTAGCTTCTCTAAGCCACTTTAATATCTATTTCTCAGACCTGGTAGGCAATTCTTCAAGTTTCCAATaGAGGGTCTCAAATGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LLASLSHFNIYFSDLVGNSSSFQ*RVSNVG Trigger: GCCAACATTTGAGACCCTGCATTGGAAACTTGAAGA...ATTGCCTACCAGGTCTGAGAAATAGATATTAAAGTGGCTTAGAGAAGCTAACAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS-3UTR CCA 90 bp | GATGCAGAACATTTGATACACACATTACCTAAGAAAACAGGGAAGTTCTTCAAGGCCCGTCACTTGTTGTaGTGTAGTAGTTCACGAATT | + |
|
Preference number: 4 (lower is better) Translates to: DAEHLIHTLPKKTGKFFKARHLL*CSSSRI Trigger: AATTCGTGAACTACTACACCACAACAAGTGACGGGC...CTTGAAGAACTTCCCTGTTTTCTTAGGTAATGTGTGTATCAAATGTTCTGCATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS-3UTR CCA 90 bp | TGTCATCTGTTGATTCTCTTGATGGGCATTCAAACAATAAATAGAAATGTGAGGGCTTCAAAAGCTGTATaGAGTTGCGGTCTATCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: CHLLILLMGIQTINRNVRASKAV*SCGLSP Trigger: GGGAGATAGACCGCAACTCCATACAGCTTTTGAAGC...CCTCACATTTCTATTTATTGTTTGAATGCCCATCAAGAGAATCAACAGATGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS-3UTR CCA 90 bp | CATCGGCTTTGCAACCTGATTCCTGACATTAAGAGATTAAAACTAATGCAGATGGACCCACCATCATTTTaGAGATATTCTTGCAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: HRLCNLIPDIKRLKLMQMDPPSF*RYSCRL Trigger: AAGCCTGCAAGAATATCTCCAAAATGATGGTGGGTC...CATCTGCATTAGTTTTAATCTCTTAATGTCAGGAATCAGGTTGCAAAGCCGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS-3UTR CCA 90 bp | CTGTTAGCTTCTCTAAGCCACTTTAATATCTATTTCTCAGACCTGGTAGGCAATTGCAGTCCACTTCACTaGCAGCTTTATTTCGTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LLASLSHFNIYFSDLVGNCSPLH*QLYFVF Trigger: AAACACGAAATAAAGCTGCCAGTGAAGTGGACTGCA...ATTGCCTACCAGGTCTGAGAAATAGATATTAAAGTGGCTTAGAGAAGCTAACAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS-3UTR TCA 90 bp | GATGCAGAACATTTGATACACACATTACCTAAGAAAACAGGGAAGTTCTTCAAGGCCCGTCTGGTTTTCTaGATACAGAAGTTGTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: DAEHLIHTLPKKTGKFFKARLVF*IQKLFF Trigger: GAAAAACAACTTCTGTATTCAGAAAACCAGACGGGC...CTTGAAGAACTTCCCTGTTTTCTTAGGTAATGTGTGTATCAAATGTTCTGCATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS-3UTR GCA 90 bp | TGTCTCTTTCTCCTCTTAGACTGTGGATGTGATGAAATCATTTTCAAGCTCTCTAACAAGGACATTTCTTaGAGCCAGATCTCTGTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: CLFLLLDCGCDEIIFKLSNKDIS*SQISVN Trigger: ATTCACAGAGATCTGGCTGCAAGAAATGTCCTTGTT...AGAGAGCTTGAAAATGATTTCATCACATCCACAGTCTAAGAGGAGAAAGAGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019913.15 |
||
| CDS-3UTR GCA 90 bp | GATGCAGAACATTTGATACACACATTACCTAAGAAAACAGGGAAGTTCTTCAAGTCTTCAAGTTTCCAATaGAGGGTCTCAAATGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: DAEHLIHTLPKKTGKFFKSSSFQ*RVSNVG Trigger: GCCAACATTTGAGACCCTGCATTGGAAACTTGAAGA...CTTGAAGAACTTCCCTGTTTTCTTAGGTAATGTGTGTATCAAATGTTCTGCATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS-3UTR CCA 90 bp | AAATTTCATTTTAGCCGACTAGCTGTTGAATGTCTTCTCCTTGGTTACATTAGAAAAGGGGTTGGTACCTaGATCTTTAAGCATGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KFHFSRLAVECLLLGYIRKGVGT*IFKHGF Trigger: GAAGCCATGCTTAAAGATCCAGGTACCAACCCCTTT...TCTAATGTAACCAAGGAGAAGACATTCAACAGCTAGTCGGCTAAAATGAAATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019913.15 |
||
| CDS-3UTR CCA 90 bp | TGTCATCTGTTGATTCTCTTGATGGGCATTCAAACAATAAATAGAAATGTGAGGAAAGGGGTTGGTACCTaGATCTTTAAGCATGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CHLLILLMGIQTINRNVRKGVGT*IFKHGF Trigger: GAAGCCATGCTTAAAGATCCAGGTACCAACCCCTTT...CCTCACATTTCTATTTATTGTTTGAATGCCCATCAAGAGAATCAACAGATGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS-3UTR CCA 90 bp | ATCCATTTTGTCTTCTTAAATATAAGAGAACAAGGAGCCTCACTTACCACTGGTGACCCACCATCATTTTaGAGATATTCTTGCAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: IHFVFLNIREQGASLTTGDPPSF*RYSCRL Trigger: AAGCCTGCAAGAATATCTCCAAAATGATGGTGGGTC...ACCAGTGGTAAGTGAGGCTCCTTGTTCTCTTATATTTAAGAAGACAAAATGGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019913.15 |
||
| CDS-3UTR CCA 90 bp | ATCCATTTTGTCTTCTTAAATATAAGAGAACAAGGAGCCTCACTTACCACTGGTTGCAGTCCACTTCACTaGCAGCTTTATTTCGTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: IHFVFLNIREQGASLTTGCSPLH*QLYFVF Trigger: AAACACGAAATAAAGCTGCCAGTGAAGTGGACTGCA...ACCAGTGGTAAGTGAGGCTCCTTGTTCTCTTATATTTAAGAAGACAAAATGGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019913.15 |
||
| CDS-3UTR TCA 90 bp | TGTCATCTGTTGATTCTCTTGATGGGCATTCAAACAATAAATAGAAATGTGAGGGAATTCATTCAGGGTTaGAAAGACTTTCCTCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: CHLLILLMGIQTINRNVREFIQG*KDFPPG Trigger: ACCAGGAGGAAAGTCTTTTCAACCCTGAATGAATTC...CCTCACATTTCTATTTATTGTTTGAATGCCCATCAAGAGAATCAACAGATGACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS-3UTR GCA 90 bp | TGTCTCTTTCTCCTCTTAGACTGTGGATGTGATGAAATCATTTTCAAGCTCTCTCAGAAGTTGTTTTTCTaGATCTGCTCTTTTGATTGC | + |
|
Preference number: 4 (lower is better) Translates to: CLFLLLDCGCDEIIFKLSQKLFF*ICSFDC Trigger: GCAATCAAAAGAGCAGATGCAGAAAAACAACTTCTG...AGAGAGCTTGAAAATGATTTCATCACATCCACAGTCTAAGAGGAGAAAGAGACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000019913.15 |
||
| CDS-3UTR GCA 90 bp | CATCGGCTTTGCAACCTGATTCCTGACATTAAGAGATTAAAACTAATGCAGATGCAGAAGTTGTTTTTCTaGATCTGCTCTTTTGATTGC | + |
|
Preference number: 4 (lower is better) Translates to: HRLCNLIPDIKRLKLMQMQKLFF*ICSFDC Trigger: GCAATCAAAAGAGCAGATGCAGAAAAACAACTTCTG...CATCTGCATTAGTTTTAATCTCTTAATGTCAGGAATCAGGTTGCAAAGCCGATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS-3UTR GCA 90 bp | ATCCATTTTGTCTTCTTAAATATAAGAGAACAAGGAGCCTCACTTACCACTGGTTTTTGGAGATATTCTTaGAGGCTTCCATGTCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: IHFVFLNIREQGASLTTGFWRYS*RLPCLI Trigger: GATGAGACATGGAAGCCTGCAAGAATATCTCCAAAA...ACCAGTGGTAAGTGAGGCTCCTTGTTCTCTTATATTTAAGAAGACAAAATGGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019913.15 |
||
| CDS-3UTR GCA 90 bp | GATGCAGAACATTTGATACACACATTACCTAAGAAAACAGGGAAGTTCTTCAAGTTTTGGAGATATTCTTaGAGGCTTCCATGTCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: DAEHLIHTLPKKTGKFFKFWRYS*RLPCLI Trigger: GATGAGACATGGAAGCCTGCAAGAATATCTCCAAAA...CTTGAAGAACTTCCCTGTTTTCTTAGGTAATGTGTGTATCAAATGTTCTGCATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS-3UTR CCA 90 bp | ACAATAGAAGATTCCAGAATCTATGGAGCTGATTTTAGAAAAGTCTTGCTAACCGCAGTTAGATGGCTGTaGAAGTCTGTAGTTTTGACT | + |
|
Preference number: 4 (lower is better) Translates to: TIEDSRIYGADFRKVLLTAVRWL*KSVVLT Trigger: AGTCAAAACTACAGACTTCCACAGCCATCTAACTGC...GGTTAGCAAGACTTTTCTAAAATCAGCTCCATAGATTCTGGAATCTTCTATTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS-3UTR TCA 90 bp | TGTCATCTGTTGATTCTCTTGATGGGCATTCAAACAATAAATAGAAATGTGAGGAATCAAATGGATTTTTaGCCCACCATCATTTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: CHLLILLMGIQTINRNVRNQMDF*PTIILE Trigger: CTCCAAAATGATGGTGGGTCAAAAATCCATTTGATT...CCTCACATTTCTATTTATTGTTTGAATGCCCATCAAGAGAATCAACAGATGACA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS-3UTR GCA 90 bp | GATGCAGAACATTTGATACACACATTACCTAAGAAAACAGGGAAGTTCTTCAAGTACCTTAAAAACTCTTaGAAGTCCAAAATCTGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: DAEHLIHTLPKKTGKFFKYLKNS*KSKICY Trigger: GTAGCAGATTTTGGACTTGCAAGAGTTTTTAAGGTA...CTTGAAGAACTTCCCTGTTTTCTTAGGTAATGTGTGTATCAAATGTTCTGCATC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS-3UTR GCA 90 bp | TGTCATCTGTTGATTCTCTTGATGGGCATTCAAACAATAAATAGAAATGTGAGGTACCTTAAAAACTCTTaGAAGTCCAAAATCTGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: CHLLILLMGIQTINRNVRYLKNS*KSKICY Trigger: GTAGCAGATTTTGGACTTGCAAGAGTTTTTAAGGTA...CCTCACATTTCTATTTATTGTTTGAATGCCCATCAAGAGAATCAACAGATGACA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS CCA 90 bp | AAAACCACGGCTCTGCCTGGAGACTCCGGTCCTCCGCCACGTAATTaGAAGGAATGTAGCCCTGTAGCTGCTGACCTAAGCCGGTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: KTTALPGDSGPPPRN*KECSPVAADLSRFP Trigger: AGGGAACCGGCTTAGGTCAGCAGCTACAGGGCTACATTCCTTCCAATTACGTGGCGGAGGACCGGAGTCTCCAGGCAGAGCCGTGGTTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS CCA 90 bp | AAATGTCTGGCCAACCACCAGCCCTCATGCGAAGTGTCCAAGACTTaGAGTTTGTCGCCGGCACGGAAGCTCAGGTCCTCTGCAGTACGT | + |
|
Preference number: 5 (lower is better) Translates to: KCLANHQPSCEVSKT*SLSPARKLRSSAVR Trigger: ACGTACTGCAGAGGACCTGAGCTTCCGTGCCGGCGACAAACTCCAAGTCTTGGACACTTCGCATGAGGGCTGGTGGTTGGCCAGACATTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS CCA 90 bp | CCTGTAGCTGCTGACCTAAGCCGGTTCCCTTCTTCTCCAAATGTCTaGCCAACCACCAGCCCTCATGCGAAGTGTCCAAGACTTGGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: PVAADLSRFPSSPNV*PTTSPHAKCPRLGV Trigger: AACTCCAAGTCTTGGACACTTCGCATGAGGGCTGGTGGTTGGCCAGACATTTGGAGAAGAAGGGAACCGGCTTAGGTCAGCAGCTACAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS TCA 90 bp | CAGAAGGCCCCTGGATTCTCAATTACTACTGACTTGTCTGCCTCTTaGGACCAGCACGGGAGAAAAGGCTGCAGGTATGCCCAGAGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: QKAPGFSITTDLSAS*DQHGRKGCRYAQSL Trigger: GAGACTCTGGGCATACCTGCAGCCTTTTCTCCCGTGCTGGTCTCAAGAGGCAGACAAGTCAGTAGTAATTGAGAATCCAGGGGCCTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS GCA 90 bp | GTCCAAGACTTGGAGTTTGTCGCCGGCACGGAAGCTCAGGTCCTCTaGAGTACGTGCTTGGTAATCAAACAGAGCCACAAAATACTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: VQDLEFVAGTEAQVL*STCLVIKQSHKILA Trigger: GGCCAGTATTTTGTGGCTCTGTTTGATTACCAAGCACGTACTGCAGAGGACCTGAGCTTCCGTGCCGGCGACAAACTCCAAGTCTTGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS GCA 90 bp | TTGGAGTTTGTCGCCGGCACGGAAGCTCAGGTCCTCTGCAGTACGTaGTTGGTAATCAAACAGAGCCACAAAATACTGGCCATGGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LEFVAGTEAQVLCST*LVIKQSHKILAMAS Trigger: AGAAGCCATGGCCAGTATTTTGTGGCTCTGTTTGATTACCAAGCACGTACTGCAGAGGACCTGAGCTTCCGTGCCGGCGACAAACTCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS TCA 90 bp | CAAAAGGGGTTGGTACCTGGATCTTTAAGCATGGCTTCTCCAGCTTaGCACACAGCCCGTCACTTGTTGTGGTGTAGTAGTTCACGAATT | + |
|
Preference number: 5 (lower is better) Translates to: QKGLVPGSLSMASPA*HTARHLLWCSSSRI Trigger: AATTCGTGAACTACTACACCACAACAAGTGACGGGCTGTGTGTCAAGCTGGAGAAGCCATGCTTAAAGATCCAGGTACCAACCCCTTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS-3UTR CAA 90 bp | GGTAGTTCCCCTATATTCCCATACATAACAATTCATCGGCTTTGCAACCTGATTCATGGCTTCTCCAGCTaGACACACAGCCCGTCACTT | + |
|
Preference number: 5 (lower is better) Translates to: GSSPIFPYITIHRLCNLIHGFSS*THSPSL Trigger: AAGTGACGGGCTGTGTGTCAAGCTGGAGAAGCCATG...AATCAGGTTGCAAAGCCGATGAATTGTTATGTATGGGAATATAGGGGAACTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
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| CDS-3UTR CAA 90 bp | GGTAGTTCCCCTATATTCCCATACATAACAATTCATCGGCTTTGCAACCTGATTCTCTGCAGTACGTGCTaGGTAATCAAACAGAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: GSSPIFPYITIHRLCNLILCSTC*VIKQSH Trigger: GTGGCTCTGTTTGATTACCAAGCACGTACTGCAGAG...AATCAGGTTGCAAAGCCGATGAATTGTTATGTATGGGAATATAGGGGAACTACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS-3UTR CAA 90 bp | TGTCTCTTTCTCCTCTTAGACTGTGGATGTGATGAAATCATTTTCAAGCTCTCTAAAAGCTGTATGGAGTaGCGGTCTATCTCCCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: CLFLLLDCGCDEIIFKLSKSCME*RSISHW Trigger: CCAGTGGGAGATAGACCGCAACTCCATACAGCTTTT...AGAGAGCTTGAAAATGATTTCATCACATCCACAGTCTAAGAGGAGAAAGAGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019913.15 |
||
| CDS-3UTR CAA 90 bp | GATGCAGAACATTTGATACACACATTACCTAAGAAAACAGGGAAGTTCTTCAAGAAAAGCTGTATGGAGTaGCGGTCTATCTCCCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: DAEHLIHTLPKKTGKFFKKSCME*RSISHW Trigger: CCAGTGGGAGATAGACCGCAACTCCATACAGCTTTT...CTTGAAGAACTTCCCTGTTTTCTTAGGTAATGTGTGTATCAAATGTTCTGCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS-3UTR CAA 90 bp | CTGTTAGCTTCTCTAAGCCACTTTAATATCTATTTCTCAGACCTGGTAGGCAATCCCTCAGGAAGTCATTaGGATCCATTGAACCTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: LLASLSHFNIYFSDLVGNPSGSH*DPLNLV Trigger: AACCAGGTTCAATGGATCCAAATGACTTCCTGAGGG...ATTGCCTACCAGGTCTGAGAAATAGATATTAAAGTGGCTTAGAGAAGCTAACAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS-3UTR CAA 90 bp | CATCGGCTTTGCAACCTGATTCCTGACATTAAGAGATTAAAACTAATGCAGATGCATGATGCTGTAGAATaGCTGTGGGCAGTTAGATGG | + |
|
Preference number: 5 (lower is better) Translates to: HRLCNLIPDIKRLKLMQMHDAVE*LWAVRW Trigger: CCATCTAACTGCCCACAGCAATTCTACAGCATCATG...CATCTGCATTAGTTTTAATCTCTTAATGTCAGGAATCAGGTTGCAAAGCCGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS-3UTR CAA 90 bp | ACAATAGAAGATTCCAGAATCTATGGAGCTGATTTTAGAAAAGTCTTGCTAACCCTCTGCAGTACGTGCTaGGTAATCAAACAGAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: TIEDSRIYGADFRKVLLTLCSTC*VIKQSH Trigger: GTGGCTCTGTTTGATTACCAAGCACGTACTGCAGAG...GGTTAGCAAGACTTTTCTAAAATCAGCTCCATAGATTCTGGAATCTTCTATTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS-3UTR CAA 90 bp | ATCCATTTTGTCTTCTTAAATATAAGAGAACAAGGAGCCTCACTTACCACTGGTCCCTCAGGAAGTCATTaGGATCCATTGAACCTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: IHFVFLNIREQGASLTTGPSGSH*DPLNLV Trigger: AACCAGGTTCAATGGATCCAAATGACTTCCTGAGGG...ACCAGTGGTAAGTGAGGCTCCTTGTTCTCTTATATTTAAGAAGACAAAATGGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019913.15 |
||
| CDS GCA 90 bp | CACATCAGACTTAATGCTGAATTTATTAGTACGAATGGCTTCGGGTaGAGTCCACTTCACTGGCAGCTTTATTTCGTGTTTAGATTCATA | + |
|
Preference number: 5 (lower is better) Translates to: HIRLNAEFISTNGFG*SPLHWQLYFVFRFI Trigger: TATGAATCTAAACACGAAATAAAGCTGCCAGTGAAGTGGACTGCACCCGAAGCCATTCGTACTAATAAATTCAGCATTAAGTCTGATGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS CCA 90 bp | GCTGAATTTATTAGTACGAATGGCTTCGGGTGCAGTCCACTTCACTaGCAGCTTTATTTCGTGTTTAGATTCATAGATGTCTTCATTATC | + |
|
Preference number: 5 (lower is better) Translates to: AEFISTNGFGCSPLH*QLYFVFRFIDVFII Trigger: GATAATGAAGACATCTATGAATCTAAACACGAAATAAAGCTGCCAGTGAAGTGGACTGCACCCGAAGCCATTCGTACTAATAAATTCAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS-3UTR CAA 90 bp | GATGCAGAACATTTGATACACACATTACCTAAGAAAACAGGGAAGTTCTTCAAGCGAATTCATTCAGGGTaGAAAAGACTTTCCTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: DAEHLIHTLPKKTGKFFKRIHSG*KRLSSW Trigger: CCAGGAGGAAAGTCTTTTCAACCCTGAATGAATTCG...CTTGAAGAACTTCCCTGTTTTCTTAGGTAATGTGTGTATCAAATGTTCTGCATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS-3UTR CAA 90 bp | TGTCATCTGTTGATTCTCTTGATGGGCATTCAAACAATAAATAGAAATGTGAGGCATGATGCTGTAGAATaGCTGTGGGCAGTTAGATGG | + |
|
Preference number: 5 (lower is better) Translates to: CHLLILLMGIQTINRNVRHDAVE*LWAVRW Trigger: CCATCTAACTGCCCACAGCAATTCTACAGCATCATG...CCTCACATTTCTATTTATTGTTTGAATGCCCATCAAGAGAATCAACAGATGACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS-3UTR CAA 90 bp | TGTCATCTGTTGATTCTCTTGATGGGCATTCAAACAATAAATAGAAATGTGAGGCGAATTCATTCAGGGTaGAAAAGACTTTCCTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: CHLLILLMGIQTINRNVRRIHSG*KRLSSW Trigger: CCAGGAGGAAAGTCTTTTCAACCCTGAATGAATTCG...CCTCACATTTCTATTTATTGTTTGAATGCCCATCAAGAGAATCAACAGATGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS-3UTR CAA 90 bp | CATCGGCTTTGCAACCTGATTCCTGACATTAAGAGATTAAAACTAATGCAGATGATTTTGGAGATATTCTaGCAGGCTTCCATGTCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: HRLCNLIPDIKRLKLMQMILEIF*QASMSH Trigger: ATGAGACATGGAAGCCTGCAAGAATATCTCCAAAAT...CATCTGCATTAGTTTTAATCTCTTAATGTCAGGAATCAGGTTGCAAAGCCGATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS-3UTR CAA 90 bp | CATCGGCTTTGCAACCTGATTCCTGACATTAAGAGATTAAAACTAATGCAGATGCAACATTTGAATTACTaGAGCACCTGTCATACCACT | + |
|
Preference number: 5 (lower is better) Translates to: HRLCNLIPDIKRLKLMQMQHLNY*STCHTT Trigger: AGTGGTATGACAGGTGCTCAAGTAATTCAAATGTTG...CATCTGCATTAGTTTTAATCTCTTAATGTCAGGAATCAGGTTGCAAAGCCGATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS-3UTR CAA 90 bp | GATGCAGAACATTTGATACACACATTACCTAAGAAAACAGGGAAGTTCTTCAAGCAACATTTGAATTACTaGAGCACCTGTCATACCACT | + |
|
Preference number: 5 (lower is better) Translates to: DAEHLIHTLPKKTGKFFKQHLNY*STCHTT Trigger: AGTGGTATGACAGGTGCTCAAGTAATTCAAATGTTG...CTTGAAGAACTTCCCTGTTTTCTTAGGTAATGTGTGTATCAAATGTTCTGCATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS-3UTR CAA 90 bp | CATCGGCTTTGCAACCTGATTCCTGACATTAAGAGATTAAAACTAATGCAGATGGTTTTGACTCAACATTaGAATTACTTGAGCACCTGT | + |
|
Preference number: 5 (lower is better) Translates to: HRLCNLIPDIKRLKLMQMVLTQH*NYLSTC Trigger: ACAGGTGCTCAAGTAATTCAAATGTTGAGTCAAAAC...CATCTGCATTAGTTTTAATCTCTTAATGTCAGGAATCAGGTTGCAAAGCCGATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS-3UTR CAA 90 bp | CTGTTAGCTTCTCTAAGCCACTTTAATATCTATTTCTCAGACCTGGTAGGCAATGTTTTGACTCAACATTaGAATTACTTGAGCACCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LLASLSHFNIYFSDLVGNVLTQH*NYLSTC Trigger: ACAGGTGCTCAAGTAATTCAAATGTTGAGTCAAAAC...ATTGCCTACCAGGTCTGAGAAATAGATATTAAAGTGGCTTAGAGAAGCTAACAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS-3UTR CAA 90 bp | TGCCAAAGAAACTTTTTATTATTACTTAGAAAGCTGCAGCAATCCTCTAGCTCTAGTCATTTGGATCCATaGAACCTGGTTTTAACGTTT | + |
|
Preference number: 5 (lower is better) Translates to: CQRNFLLLLRKLQQSSSSSHLDP*NLVLTF Trigger: AAACGTTAAAACCAGGTTCAATGGATCCAAATGACT...AGAGCTAGAGGATTGCTGCAGCTTTCTAAGTAATAATAAAAAGTTTCTTTGGCA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS-3UTR CAA 90 bp | TGTCATCTGTTGATTCTCTTGATGGGCATTCAAACAATAAATAGAAATGTGAGGAGTCATTTGGATCCATaGAACCTGGTTTTAACGTTT | + |
|
Preference number: 5 (lower is better) Translates to: CHLLILLMGIQTINRNVRSHLDP*NLVLTF Trigger: AAACGTTAAAACCAGGTTCAATGGATCCAAATGACT...CCTCACATTTCTATTTATTGTTTGAATGCCCATCAAGAGAATCAACAGATGACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS CAA 72 bp | GGCCAACCACCAGCCCTCATGCGAAGTGTCCAAGACTaGGAGTTTGTCGCCGGCACGGAAGCTCAGGTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: GQPPALMRSVQD*EFVAGTEAQVL Trigger: GAGGACCTGAGCTTCCGTGCCGGCGACAAACTCCAAGTCTTGGACACTTCGCATGAGGGCTGGTGGTTGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS CAA 90 bp | CTGGCCAACCACCAGCCCTCATGCGAAGTGTCCAAGACTTGGAGTTaGTCGCCGGCACGGAAGCTCAGGTCCTCTGCAGTACGTGCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: LANHQPSCEVSKTWS*SPARKLRSSAVRAW Trigger: CCAAGCACGTACTGCAGAGGACCTGAGCTTCCGTGCCGGCGACAAACTCCAAGTCTTGGACACTTCGCATGAGGGCTGGTGGTTGGCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS CCA 72 bp | AATACTGGCCATGGCTTCTCTCGGGCTCTTGTGACCTaGGAGCCTCTGGGGGACAGAAGGCCCCTGGATTCT | + |
|
Preference number: 6 (lower is better) Translates to: NTGHGFSRALVT*EPLGDRRPLDS Trigger: AGAATCCAGGGGCCTTCTGTCCCCCAGAGGCTCCCAGGTCACAAGAGCCCGAGAGAAGCCATGGCCAGTATT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
||
| CDS CCA 72 bp | GCCAACCACCAGCCCTCATGCGAAGTGTCCAAGACTTaGAGTTTGTCGCCGGCACGGAAGCTCAGGTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: ANHQPSCEVSKT*SLSPARKLRSS Trigger: AGAGGACCTGAGCTTCCGTGCCGGCGACAAACTCCAAGTCTTGGACACTTCGCATGAGGGCTGGTGGTTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
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| CDS CAA 90 bp | CAAATGTCTGGCCAACCACCAGCCCTCATGCGAAGTGTCCAAGACTaGGAGTTTGTCGCCGGCACGGAAGCTCAGGTCCTCTGCAGTACG | + |
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Preference number: 6 (lower is better) Translates to: QMSGQPPALMRSVQD*EFVAGTEAQVLCST Trigger: CGTACTGCAGAGGACCTGAGCTTCCGTGCCGGCGACAAACTCCAAGTCTTGGACACTTCGCATGAGGGCTGGTGGTTGGCCAGACATTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
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| CDS CAA 72 bp | CACCAGCCCTCATGCGAAGTGTCCAAGACTTGGAGTTaGTCGCCGGCACGGAAGCTCAGGTCCTCTGCAGTA | + |
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Preference number: 6 (lower is better) Translates to: HQPSCEVSKTWS*SPARKLRSSAV Trigger: TACTGCAGAGGACCTGAGCTTCCGTGCCGGCGACAAACTCCAAGTCTTGGACACTTCGCATGAGGGCTGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
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| CDS GCA 72 bp | GTCGCCGGCACGGAAGCTCAGGTCCTCTGCAGTACGTaGTTGGTAATCAAACAGAGCCACAAAATACTGGCC | + |
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Preference number: 6 (lower is better) Translates to: VAGTEAQVLCST*LVIKQSHKILA Trigger: GGCCAGTATTTTGTGGCTCTGTTTGATTACCAAGCACGTACTGCAGAGGACCTGAGCTTCCGTGCCGGCGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
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| CDS CCA 72 bp | GCTGACCTAAGCCGGTTCCCTTCTTCTCCAAATGTCTaGCCAACCACCAGCCCTCATGCGAAGTGTCCAAGA | + |
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Preference number: 6 (lower is better) Translates to: ADLSRFPSSPNV*PTTSPHAKCPR Trigger: TCTTGGACACTTCGCATGAGGGCTGGTGGTTGGCCAGACATTTGGAGAAGAAGGGAACCGGCTTAGGTCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
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| CDS TCA 72 bp | TGGGGGACAGAAGGCCCCTGGATTCTCAATTACTACTaGCTTGTCTGCCTCTTGAGACCAGCACGGGAGAAA | + |
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Preference number: 6 (lower is better) Translates to: WGTEGPWILNYY*LVCLLRPAREK Trigger: TTTCTCCCGTGCTGGTCTCAAGAGGCAGACAAGTCAGTAGTAATTGAGAATCCAGGGGCCTTCTGTCCCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
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| CDS GCA 72 bp | TTGGAGTTTGTCGCCGGCACGGAAGCTCAGGTCCTCTaGAGTACGTGCTTGGTAATCAAACAGAGCCACAAA | + |
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Preference number: 6 (lower is better) Translates to: LEFVAGTEAQVL*STCLVIKQSHK Trigger: TTTGTGGCTCTGTTTGATTACCAAGCACGTACTGCAGAGGACCTGAGCTTCCGTGCCGGCGACAAACTCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
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| CDS TCA 72 bp | CCTGGATTCTCAATTACTACTGACTTGTCTGCCTCTTaGGACCAGCACGGGAGAAAAGGCTGCAGGTATGCC | + |
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Preference number: 6 (lower is better) Translates to: PGFSITTDLSAS*DQHGRKGCRYA Trigger: GGCATACCTGCAGCCTTTTCTCCCGTGCTGGTCTCAAGAGGCAGACAAGTCAGTAGTAATTGAGAATCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
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| CDS CCA 72 bp | CAAACTGACCAGATCCCAGTCGCTTCAAAAGCTGTATaGAGTTGCGGTCTATCTCCCACTGGTCTGCAGTTT | + |
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Preference number: 6 (lower is better) Translates to: QTDQIPVASKAV*SCGLSPTGLQF Trigger: AAACTGCAGACCAGTGGGAGATAGACCGCAACTCCATACAGCTTTTGAAGCGACTGGGATCTGGTCAGTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
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| CDS TCA 72 bp | TTGGTACCTGGATCTTTAAGCATGGCTTCTCCAGCTTaGCACACAGCCCGTCACTTGTTGTGGTGTAGTAGT | + |
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Preference number: 6 (lower is better) Translates to: LVPGSLSMASPA*HTARHLLWCSS Trigger: ACTACTACACCACAACAAGTGACGGGCTGTGTGTCAAGCTGGAGAAGCCATGCTTAAAGATCCAGGTACCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
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| CDS GCA 72 bp | GACCAGATCCCAGTCGCTTCAAAAGCTGTATGGAGTTaGGGTCTATCTCCCACTGGTCTGCAGTTTTATATG | + |
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Preference number: 6 (lower is better) Translates to: DQIPVASKAVWS*GLSPTGLQFYM Trigger: CATATAAAACTGCAGACCAGTGGGAGATAGACCGCAACTCCATACAGCTTTTGAAGCGACTGGGATCTGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
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| CDS GCA 72 bp | TCAAGTTTCCAATGCAGGGTCTCAAATGTTGGCCGTTaGTTAGGCTCAACATTCCAGCACTCTAGCATGATG | + |
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Preference number: 6 (lower is better) Translates to: SSFQCRVSNVGR*LGSTFQHSSMM Trigger: CATCATGCTAGAGTGCTGGAATGTTGAGCCTAAGCAACGGCCAACATTTGAGACCCTGCATTGGAAACTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
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| CDS TCA 72 bp | TGTTGTGGTGTAGTAGTTCACGAATTCATTCAGGGTTaGAAAGACTTTCCTCCTGGTGAGGAAGAAGCCACC | + |
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Preference number: 6 (lower is better) Translates to: CCGVVVHEFIQG*KDFPPGEEEAT Trigger: GGTGGCTTCTTCCTCACCAGGAGGAAAGTCTTTTCAACCCTGAATGAATTCGTGAACTACTACACCACAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
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| CDS TCA 72 bp | ATTCCAGAAGCCACCTGTGCCGCCATGTCTACCTGTTaGATCAAATGGATTTTTGACCCACCATCATTTTGG | + |
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Preference number: 6 (lower is better) Translates to: IPEATCAAMSTC*IKWIFDPPSFW Trigger: CCAAAATGATGGTGGGTCAAAAATCCATTTGATTCAACAGGTAGACATGGCGGCACAGGTGGCTTCTGGAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
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| CDS CAA 90 bp | TGGGCAGTTAGATGGCTGTGGAAGTCTGTAGTTTTGACTCAACATTaGAATTACTTGAGCACCTGTCATACCACTGTAAGGCATTTTGCC | + |
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Preference number: 6 (lower is better) Translates to: WAVRWLWKSVVLTQH*NYLSTCHTTVRHFA Trigger: GGCAAAATGCCTTACAGTGGTATGACAGGTGCTCAAGTAATTCAAATGTTGAGTCAAAACTACAGACTTCCACAGCCATCTAACTGCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
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| CDS TCA 72 bp | TGGGATCTTCTAAAGTGCAAACAGCATAGAGCTGGATaGGTTTTGGGTGTCTTAGGCTCTTCATTATCTGTG | + |
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Preference number: 6 (lower is better) Translates to: WDLLKCKQHRAG*VLGVLGSSLSV Trigger: CACAGATAATGAAGAGCCTAAGACACCCAAAACTCATCCAGCTCTATGCTGTTTGCACTTTAGAAGATCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
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| CDS CCA 72 bp | TTGAACCTGGTTTTAACGTTTTTACGGCCACTGGAGTaGTATTATTCCACAGACCTTCCCAAACTTCTCCAA | + |
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Preference number: 6 (lower is better) Translates to: LNLVLTFLRPLE*YYSTDLPKLLQ Trigger: TTGGAGAAGTTTGGGAAGGTCTGTGGAATAATACCACTCCAGTGGCCGTAAAAACGTTAAAACCAGGTTCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
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| CDS CCA 72 bp | ATTAGTACGAATGGCTTCGGGTGCAGTCCACTTCACTaGCAGCTTTATTTCGTGTTTAGATTCATAGATGTC | + |
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Preference number: 6 (lower is better) Translates to: ISTNGFGCSPLH*QLYFVFRFIDV Trigger: GACATCTATGAATCTAAACACGAAATAAAGCTGCCAGTGAAGTGGACTGCACCCGAAGCCATTCGTACTAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
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| CDS GCA 72 bp | CTTAATGCTGAATTTATTAGTACGAATGGCTTCGGGTaGAGTCCACTTCACTGGCAGCTTTATTTCGTGTTT | + |
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Preference number: 6 (lower is better) Translates to: LNAEFISTNGFG*SPLHWQLYFVF Trigger: AAACACGAAATAAAGCTGCCAGTGAAGTGGACTGCACCCGAAGCCATTCGTACTAATAAATTCAGCATTAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
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| CDS CAA 72 bp | AGATGGCTGTGGAAGTCTGTAGTTTTGACTCAACATTaGAATTACTTGAGCACCTGTCATACCACTGTAAGG | + |
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Preference number: 6 (lower is better) Translates to: RWLWKSVVLTQH*NYLSTCHTTVR Trigger: CCTTACAGTGGTATGACAGGTGCTCAAGTAATTCAAATGTTGAGTCAAAACTACAGACTTCCACAGCCATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019913.15 ENSMUST00000170771.3 |
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