Pregenerated sensors for FRG2F1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000087385Ensembl transcript IDs: ENSMUST00000079611.13
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTTCTCATCGATGTGCCTGTTACATGTTCACACAGAGAGGGTGAGTaGCACAGGCAGTGTAGACAGGGAGATGGAACGGTTCTTTGGTGT | + |
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Preference number: 1 (lower is better) Translates to: LLIDVPVTCSHREGE*HRQCRQGDGTVLWC Trigger: ACACCAAAGAACCGTTCCATCTCCCTGTCTACACTGCCTGTGGCACTCACCCTCTCTGTGTGAACATGTAACAGGCACATCGATGAGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079611.13 |
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| 3UTR TCA 90 bp | GCAAAATATCCAAAGGAAGCACGGATCGACTGTGCATTTAGCACTTaGATCTTAGGTCCCAGAGAAACACAGTTCATAATCCAGATAAGC | + |
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Preference number: 1 (lower is better) Translates to: AKYPKEARIDCAFST*ILGPRETQFIIQIS Trigger: GCTTATCTGGATTATGAACTGTGTTTCTCTGGGACCTAAGATTCAAGTGCTAAATGCACAGTCGATCCGTGCTTCCTTTGGATATTTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079611.13 |
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| 3UTR-3UTR GCA 90 bp | GTATACAAATCTAACACACACTTAGCAAAATATCCAAAGGAAGCACGGATCGACCACAGAGAGGGTGAGTaGCACAGGCAGTGTAGACAG | + |
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Preference number: 2 (lower is better) Translates to: VYKSNTHLAKYPKEARIDHREGE*HRQCRQ Trigger: CTGTCTACACTGCCTGTGGCACTCACCCTCTCTGTG...GTCGATCCGTGCTTCCTTTGGATATTTTGCTAAGTGTGTGTTAGATTTGTATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079611.13 |
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| 3UTR GCA 72 bp | CCAGATAAGCATTTCAAACTCTTCTTCTCATCGATGTaGCTGTTACATGTTCACACAGAGAGGGTGAGTGCC | + |
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Preference number: 3 (lower is better) Translates to: PDKHFKLFFSSM*LLHVHTERVSA Trigger: GGCACTCACCCTCTCTGTGTGAACATGTAACAGGCACATCGATGAGAAGAAGAGTTTGAAATGCTTATCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079611.13 |
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| 3UTR TCA 72 bp | CCAAAGGAAGCACGGATCGACTGTGCATTTAGCACTTaGATCTTAGGTCCCAGAGAAACACAGTTCATAATC | + |
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Preference number: 3 (lower is better) Translates to: PKEARIDCAFST*ILGPRETQFII Trigger: GATTATGAACTGTGTTTCTCTGGGACCTAAGATTCAAGTGCTAAATGCACAGTCGATCCGTGCTTCCTTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079611.13 |
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| CDS-3UTR CCA 90 bp | CTGTTACATGTTCACACAGAGAGGGTGAGTGCCACAGGCAGTGTAGACAGGGAGCCTGAGGGGCAGCCATaGGGGCTGGGACAAGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: LLHVHTERVSATGSVDREPEGQP*GLGQAS Trigger: GCTGGCTTGTCCCAGCCCCCATGGCTGCCCCTCAGG...CTCCCTGTCTACACTGCCTGTGGCACTCACCCTCTCTGTGTGAACATGTAACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079611.13 |
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| CDS-3UTR CCA 90 bp | CACAGAGAGGGTGAGTGCCACAGGCAGTGTAGACAGGGAGATGGAACGGTTCTTGACAGAGGTGGTCTGTaGTCCAGTGGGGAGGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: HREGECHRQCRQGDGTVLDRGGL*SSGEVQ Trigger: CTGGACCTCCCCACTGGACCACAGACCACCTCTGTC...AAGAACCGTTCCATCTCCCTGTCTACACTGCCTGTGGCACTCACCCTCTCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079611.13 |
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| CDS-3UTR TCA 90 bp | ACAGAGAGGGTGAGTGCCACAGGCAGTGTAGACAGGGAGATGGAACGGTTCTTTGAGAGCTGTCTGAGCTaGGAGAGCTGCTCAGGGGTG | + |
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Preference number: 4 (lower is better) Translates to: TERVSATGSVDREMERFFESCLS*ESCSGV Trigger: CACCCCTGAGCAGCTCTCTCAGCTCAGACAGCTCTC...AAAGAACCGTTCCATCTCCCTGTCTACACTGCCTGTGGCACTCACCCTCTCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079611.13 |
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| CDS-3UTR TCA 90 bp | GTTCACACAGAGAGGGTGAGTGCCACAGGCAGTGTAGACAGGGAGATGGAACGGACTCTGAGAGCTGTCTaGGCTGAGAGAGCTGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: VHTERVSATGSVDREMERTLRAV*AERAAQ Trigger: CTGAGCAGCTCTCTCAGCTCAGACAGCTCTCAGAGT...CCGTTCCATCTCCCTGTCTACACTGCCTGTGGCACTCACCCTCTCTGTGTGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079611.13 |
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| CDS-3UTR CCA 90 bp | TTCTTCTCATCGATGTGCCTGTTACATGTTCACACAGAGAGGGTGAGTGCCACAGGCAGCCATGGGGGCTaGGACAAGCCAGCCCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: FFSSMCLLHVHTERVSATGSHGG*DKPALS Trigger: GCTGAGGGCTGGCTTGTCCCAGCCCCCATGGCTGCC...TGTGGCACTCACCCTCTCTGTGTGAACATGTAACAGGCACATCGATGAGAAGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079611.13 |
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| CDS-3UTR TCA 90 bp | TCGATGTGCCTGTTACATGTTCACACAGAGAGGGTGAGTGCCACAGGCAGTGTAAGAGCTGCTCAGGGGTaGGCAGGGAGCCAAGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: SMCLLHVHTERVSATGSVRAAQG*AGSQAS Trigger: AGAAGCTTGGCTCCCTGCTCACCCCTGAGCAGCTCT...TACACTGCCTGTGGCACTCACCCTCTCTGTGTGAACATGTAACAGGCACATCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079611.13 |
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| CDS-3UTR GCA 90 bp | CACACAGAGAGGGTGAGTGCCACAGGCAGTGTAGACAGGGAGATGGAACGGTTCCCAAGCTTCTGGGCCTaGATCTGGACTGTGTCTCTA | + |
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Preference number: 4 (lower is better) Translates to: HTERVSATGSVDREMERFPSFWA*IWTVSL Trigger: TAGAGACACAGTCCAGATGCAGGCCCAGAAGCTTGG...GAACCGTTCCATCTCCCTGTCTACACTGCCTGTGGCACTCACCCTCTCTGTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079611.13 |
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| CDS-3UTR CCA 90 bp | CTGTTACATGTTCACACAGAGAGGGTGAGTGCCACAGGCAGTGTAGACAGGGAGTGGTCTGTGGTCCAGTaGGGAGGTCCAGCAGTTGAC | + |
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Preference number: 4 (lower is better) Translates to: LLHVHTERVSATGSVDREWSVVQ*GGPAVD Trigger: GTCAACTGCTGGACCTCCCCACTGGACCACAGACCA...CTCCCTGTCTACACTGCCTGTGGCACTCACCCTCTCTGTGTGAACATGTAACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079611.13 |
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| CDS-3UTR CCA 90 bp | CACACAGAGAGGGTGAGTGCCACAGGCAGTGTAGACAGGGAGATGGAACGGTTCCCAGGCTGGAGTCCTTaGAAGAGCGTCTTCTTTTCC | + |
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Preference number: 4 (lower is better) Translates to: HTERVSATGSVDREMERFPGWSP*KSVFFS Trigger: GGAAAAGAAGACGCTCTTCCAAGGACTCCAGCCTGG...GAACCGTTCCATCTCCCTGTCTACACTGCCTGTGGCACTCACCCTCTCTGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079611.13 |
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| CDS-3UTR TCA 90 bp | CACAGAGAGGGTGAGTGCCACAGGCAGTGTAGACAGGGAGATGGAACGGTTCTTGGTGTTTCCACCATCTaGGCTGATTCTTCAGTGTGC | + |
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Preference number: 4 (lower is better) Translates to: HREGECHRQCRQGDGTVLGVSTI*ADSSVC Trigger: GCACACTGAAGAATCAGCTCAGATGGTGGAAACACC...AAGAACCGTTCCATCTCCCTGTCTACACTGCCTGTGGCACTCACCCTCTCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079611.13 |
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| CDS-3UTR TCA 90 bp | CACACAGAGAGGGTGAGTGCCACAGGCAGTGTAGACAGGGAGATGGAACGGTTCTTCCACCATCTGAGCTaGTTCTTCAGTGTGCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: HTERVSATGSVDREMERFFHHLS*FFSVLS Trigger: AGAAAGCACACTGAAGAATCAGCTCAGATGGTGGAA...GAACCGTTCCATCTCCCTGTCTACACTGCCTGTGGCACTCACCCTCTCTGTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079611.13 |
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| CDS-3UTR CCA 90 bp | GTTCACACAGAGAGGGTGAGTGCCACAGGCAGTGTAGACAGGGAGATGGAACGGCTTCAGTGTGCTTTCTaGAATTGCTGTCTGATTGGC | + |
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Preference number: 4 (lower is better) Translates to: VHTERVSATGSVDREMERLQCAF*NCCLIG Trigger: GCCAATCAGACAGCAATTCCAGAAAGCACACTGAAG...CCGTTCCATCTCCCTGTCTACACTGCCTGTGGCACTCACCCTCTCTGTGTGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079611.13 |
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| CDS-3UTR CCA 90 bp | ACAGAGAGGGTGAGTGCCACAGGCAGTGTAGACAGGGAGATGGAACGGTTCTTTGAAGGCTGTATACCATaGCAGTCAGAGACTCTGAGA | + |
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Preference number: 4 (lower is better) Translates to: TERVSATGSVDREMERFFEGCIP*QSETLR Trigger: TCTCAGAGTCTCTGACTGCCATGGTATACAGCCTTC...AAAGAACCGTTCCATCTCCCTGTCTACACTGCCTGTGGCACTCACCCTCTCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079611.13 |
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| CDS-3UTR TCA 90 bp | TTCTTCTCATCGATGTGCCTGTTACATGTTCACACAGAGAGGGTGAGTGCCACACCTCATTTCCTATTCTaGCCAGGCTGGAGTCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: FFSSMCLLHVHTERVSATPHFLF*PGWSPW Trigger: CCAAGGACTCCAGCCTGGTCAGAATAGGAAATGAGG...TGTGGCACTCACCCTCTCTGTGTGAACATGTAACAGGCACATCGATGAGAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079611.13 |
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| CDS-3UTR CCA 90 bp | GGGAGATGGAACGGTTCTTTGGTGTCTCGAGATGTGACTCTGCTTAGGATGGTCAGCGTCTTCTTTTCCTaGGTGTTTCCACCATCTGAG | + |
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Preference number: 4 (lower is better) Translates to: GRWNGSLVSRDVTLLRMVSVFFS*VFPPSE Trigger: CTCAGATGGTGGAAACACCCAGGAAAAGAAGACGCT...GACCATCCTAAGCAGAGTCACATCTCGAGACACCAAAGAACCGTTCCATCTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079611.13 |
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| CDS-3UTR TCA 90 bp | CACACAGAGAGGGTGAGTGCCACAGGCAGTGTAGACAGGGAGATGGAACGGTTCCTCAGTCTTCTTTACTaGAGTCTTGTGTCTCTTTTT | + |
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Preference number: 4 (lower is better) Translates to: HTERVSATGSVDREMERFLSLLY*SLVSLF Trigger: AAAAAGAGACACAAGACTTCAGTAAAGAAGACTGAG...GAACCGTTCCATCTCCCTGTCTACACTGCCTGTGGCACTCACCCTCTCTGTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079611.13 |
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| CDS-3UTR TCA 90 bp | ATTTCAAACTCTTCTTCTCATCGATGTGCCTGTTACATGTTCACACAGAGAGGGGGTGGGTCTGTATCCTaGGGTTCTGGGCAATGGGCT | + |
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Preference number: 4 (lower is better) Translates to: ISNSSSHRCACYMFTQRGGGSVS*GSGQWA Trigger: AGCCCATTGCCCAGAACCTCAGGATACAGACCCACC...CCCTCTCTGTGTGAACATGTAACAGGCACATCGATGAGAAGAAGAGTTTGAAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079611.13 |
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| CDS-3UTR CCA 90 bp | GGGAGATGGAACGGTTCTTTGGTGTCTCGAGATGTGACTCTGCTTAGGATGGTCGAATTGCTGTCTGATTaGCTGGACCTCTGCTCATTT | + |
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Preference number: 4 (lower is better) Translates to: GRWNGSLVSRDVTLLRMVELLSD*LDLCSF Trigger: AAATGAGCAGAGGTCCAGCCAATCAGACAGCAATTC...GACCATCCTAAGCAGAGTCACATCTCGAGACACCAAAGAACCGTTCCATCTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079611.13 |
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| CDS-3UTR CCA 90 bp | ATTTCAAACTCTTCTTCTCATCGATGTGCCTGTTACATGTTCACACAGAGAGGGAGGGAGCCAAGCTTCTaGGCCTGCATCTGGACTGTG | + |
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Preference number: 4 (lower is better) Translates to: ISNSSSHRCACYMFTQRGREPSF*ACIWTV Trigger: CACAGTCCAGATGCAGGCCCAGAAGCTTGGCTCCCT...CCCTCTCTGTGTGAACATGTAACAGGCACATCGATGAGAAGAAGAGTTTGAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079611.13 |
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| CDS-3UTR TCA 90 bp | ATTTCAAACTCTTCTTCTCATCGATGTGCCTGTTACATGTTCACACAGAGAGGGGGCAGTCAGAGACTCTaGGAGCTGTCTGAGCTGAGA | + |
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Preference number: 4 (lower is better) Translates to: ISNSSSHRCACYMFTQRGGSQRL*ELSELR Trigger: TCTCAGCTCAGACAGCTCTCAGAGTCTCTGACTGCC...CCCTCTCTGTGTGAACATGTAACAGGCACATCGATGAGAAGAAGAGTTTGAAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079611.13 |
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| CDS-3UTR TCA 90 bp | AGAGAAACACAGTTCATAATCCAGATAAGCATTTCAAACTCTTCTTCTCATCGATTGCCAGACAGCTCCTaGGGGGCAGCCATGGGGGCT | + |
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Preference number: 4 (lower is better) Translates to: RETQFIIQISISNSSSHRLPDSS*GAAMGA Trigger: AGCCCCCATGGCTGCCCCTCAGGAGCTGTCTGGCAA...TCGATGAGAAGAAGAGTTTGAAATGCTTATCTGGATTATGAACTGTGTTTCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000079611.13 |
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| CDS-3UTR CCA 90 bp | TTCTTCTCATCGATGTGCCTGTTACATGTTCACACAGAGAGGGTGAGTGCCACACATCCTGGTGACCATTaGCTTTTGGCTCAGTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: FFSSMCLLHVHTERVSATHPGDH*LLAQSS Trigger: AGAAGACTGAGCCAAAAGCCAATGGTCACCAGGATG...TGTGGCACTCACCCTCTCTGTGTGAACATGTAACAGGCACATCGATGAGAAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079611.13 |
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| CDS-3UTR TCA 90 bp | AGAGAAACACAGTTCATAATCCAGATAAGCATTTCAAACTCTTCTTCTCATCGAGGGAGGTCCAGCAGTTaGCAGGAAGGGCCTGGATGG | + |
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Preference number: 4 (lower is better) Translates to: RETQFIIQISISNSSSHRGRSSS*QEGPGW Trigger: CCATCCAGGCCCTTCCTGTCAACTGCTGGACCTCCC...TCGATGAGAAGAAGAGTTTGAAATGCTTATCTGGATTATGAACTGTGTTTCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079611.13 |
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| CDS-3UTR TCA 90 bp | GTATACAAATCTAACACACACTTAGCAAAATATCCAAAGGAAGCACGGATCGACTCCATCAAAGGACTCTaGGATTCCTTGCCAGACAGC | + |
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Preference number: 4 (lower is better) Translates to: VYKSNTHLAKYPKEARIDSIKGL*DSLPDS Trigger: GCTGTCTGGCAAGGAATCTCAGAGTCCTTTGATGGA...GTCGATCCGTGCTTCCTTTGGATATTTTGCTAAGTGTGTGTTAGATTTGTATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079611.13 |
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| CDS-3UTR TCA 90 bp | AGAGAAACACAGTTCATAATCCAGATAAGCATTTCAAACTCTTCTTCTCATCGATCTGGAATTGCTGTCTaGTTGGCTGGACCTCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: RETQFIIQISISNSSSHRSGIAV*LAGPLL Trigger: GAGCAGAGGTCCAGCCAATCAGACAGCAATTCCAGA...TCGATGAGAAGAAGAGTTTGAAATGCTTATCTGGATTATGAACTGTGTTTCTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079611.13 |
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| CDS-3UTR GCA 90 bp | ATAATCCAGATAAGCATTTCAAACTCTTCTTCTCATCGATGTGCCTGTTACATGTGTGCTTTCTGGAATTaGTGTCTGATTGGCTGGACC | + |
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Preference number: 4 (lower is better) Translates to: IIQISISNSSSHRCACYMCAFWN*CLIGWT Trigger: GGTCCAGCCAATCAGACAGCAATTCCAGAAAGCACA...CATGTAACAGGCACATCGATGAGAAGAAGAGTTTGAAATGCTTATCTGGATTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079611.13 |
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| CDS-3UTR CCA 90 bp | GTATACAAATCTAACACACACTTAGCAAAATATCCAAAGGAAGCACGGATCGACTGCTGTCTGATTGGCTaGACCTCTGCTCATTTTTAC | + |
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Preference number: 4 (lower is better) Translates to: VYKSNTHLAKYPKEARIDCCLIG*TSAHFY Trigger: GTAAAAATGAGCAGAGGTCCAGCCAATCAGACAGCA...GTCGATCCGTGCTTCCTTTGGATATTTTGCTAAGTGTGTGTTAGATTTGTATAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079611.13 |
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| CDS-3UTR GCA 90 bp | ATAATCCAGATAAGCATTTCAAACTCTTCTTCTCATCGATGTGCCTGTTACATGGATTGGCTGGACCTCTaGTCATTTTTACTTGGTTCT | + |
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Preference number: 4 (lower is better) Translates to: IIQISISNSSSHRCACYMDWLDL*SFLLGS Trigger: AGAACCAAGTAAAAATGAGCAGAGGTCCAGCCAATC...CATGTAACAGGCACATCGATGAGAAGAAGAGTTTGAAATGCTTATCTGGATTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079611.13 |
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| CDS-3UTR GCA 90 bp | AGAGAAACACAGTTCATAATCCAGATAAGCATTTCAAACTCTTCTTCTCATCGATGTCTCTTTTTCCCATaGAAGCTGCCCTCATTTCCT | + |
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Preference number: 4 (lower is better) Translates to: RETQFIIQISISNSSSHRCLFFP*KLPSFP Trigger: AGGAAATGAGGGCAGCTTGCATGGGAAAAAGAGACA...TCGATGAGAAGAAGAGTTTGAAATGCTTATCTGGATTATGAACTGTGTTTCTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079611.13 |
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| CDS TCA 90 bp | AGGCTGTATACCATGGCAGTCAGAGACTCTGAGAGCTGTCTGAGCTaGGAGAGCTGCTCAGGGGTGAGCAGGGAGCCAAGCTTCTGGGCC | + |
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Preference number: 5 (lower is better) Translates to: RLYTMAVRDSESCLS*ESCSGVSREPSFWA Trigger: GGCCCAGAAGCTTGGCTCCCTGCTCACCCCTGAGCAGCTCTCTCAGCTCAGACAGCTCTCAGAGTCTCTGACTGCCATGGTATACAGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079611.13 |
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| CDS-3UTR CAA 90 bp | CACAGAGAGGGTGAGTGCCACAGGCAGTGTAGACAGGGAGATGGAACGGTTCTTGGGGAGGTCCAGCAGTaGACAGGAAGGGCCTGGATG | + |
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Preference number: 5 (lower is better) Translates to: HREGECHRQCRQGDGTVLGEVQQ*TGRAWM Trigger: CATCCAGGCCCTTCCTGTCAACTGCTGGACCTCCCC...AAGAACCGTTCCATCTCCCTGTCTACACTGCCTGTGGCACTCACCCTCTCTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079611.13 |
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| CDS CCA 90 bp | TCTCCTCAGACTTCCCCCGCAGAAAGCTCACCAGGCTCTTCCGAATaGGTGGTGGGTCTGTATCCTGAGGTTCTGGGCAATGGGCTAATC | + |
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Preference number: 5 (lower is better) Translates to: SPQTSPAESSPGSSE*VVGLYPEVLGNGLI Trigger: GATTAGCCCATTGCCCAGAACCTCAGGATACAGACCCACCACCCATTCGGAAGAGCCTGGTGAGCTTTCTGCGGGGGAAGTCTGAGGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079611.13 |
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| CDS-3UTR CAA 90 bp | TGTTCACACAGAGAGGGTGAGTGCCACAGGCAGTGTAGACAGGGAGATGGAACGGTGTGCTTTCTGGAATaGCTGTCTGATTGGCTGGAC | + |
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Preference number: 5 (lower is better) Translates to: CSHREGECHRQCRQGDGTVCFLE*LSDWLD Trigger: GTCCAGCCAATCAGACAGCAATTCCAGAAAGCACAC...CGTTCCATCTCCCTGTCTACACTGCCTGTGGCACTCACCCTCTCTGTGTGAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079611.13 |
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| CDS TCA 90 bp | GAGTCCTTGGAAGAGCGTCTTCTTTTCCTGGGTGTTTCCACCATCTaGGCTGATTCTTCAGTGTGCTTTCTGGAATTGCTGTCTGATTGG | + |
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Preference number: 5 (lower is better) Translates to: ESLEERLLFLGVSTI*ADSSVCFLELLSDW Trigger: CCAATCAGACAGCAATTCCAGAAAGCACACTGAAGAATCAGCTCAGATGGTGGAAACACCCAGGAAAAGAAGACGCTCTTCCAAGGACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079611.13 |
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| CDS CCA 90 bp | TCCTGGGTGTTTCCACCATCTGAGCTGATTCTTCAGTGTGCTTTCTaGAATTGCTGTCTGATTGGCTGGACCTCTGCTCATTTTTACTTG | + |
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Preference number: 5 (lower is better) Translates to: SWVFPPSELILQCAF*NCCLIGWTSAHFYL Trigger: CAAGTAAAAATGAGCAGAGGTCCAGCCAATCAGACAGCAATTCCAGAAAGCACACTGAAGAATCAGCTCAGATGGTGGAAACACCCAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079611.13 |
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| CDS GCA 90 bp | TCTTCAGTGTGCTTTCTGGAATTGCTGTCTGATTGGCTGGACCTCTaGTCATTTTTACTTGGTTCTGATCCTAATGTCCTGACAGAGGTG | + |
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Preference number: 5 (lower is better) Translates to: SSVCFLELLSDWLDL*SFLLGSDPNVLTEV Trigger: CACCTCTGTCAGGACATTAGGATCAGAACCAAGTAAAAATGAGCAGAGGTCCAGCCAATCAGACAGCAATTCCAGAAAGCACACTGAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079611.13 |
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| CDS GCA 90 bp | GTGTTTCCACCATCTGAGCTGATTCTTCAGTGTGCTTTCTGGAATTaGTGTCTGATTGGCTGGACCTCTGCTCATTTTTACTTGGTTCTG | + |
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Preference number: 5 (lower is better) Translates to: VFPPSELILQCAFWN*CLIGWTSAHFYLVL Trigger: CAGAACCAAGTAAAAATGAGCAGAGGTCCAGCCAATCAGACAGCAATTCCAGAAAGCACACTGAAGAATCAGCTCAGATGGTGGAAACAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079611.13 |
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| CDS-3UTR CAA 90 bp | AGAGAAACACAGTTCATAATCCAGATAAGCATTTCAAACTCTTCTTCTCATCGAGGTGACCATTGGCTTTaGGCTCAGTCTTCTTTACTG | + |
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Preference number: 5 (lower is better) Translates to: RETQFIIQISISNSSSHRGDHWL*AQSSLL Trigger: CAGTAAAGAAGACTGAGCCAAAAGCCAATGGTCACC...TCGATGAGAAGAAGAGTTTGAAATGCTTATCTGGATTATGAACTGTGTTTCTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079611.13 |
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| CDS-3UTR CAA 90 bp | GATAAGCATTTCAAACTCTTCTTCTCATCGATGTGCCTGTTACATGTTCACACATTCTTTACTGAAGTCTaGTGTCTCTTTTTCCCATGC | + |
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Preference number: 5 (lower is better) Translates to: DKHFKLFFSSMCLLHVHTFFTEV*CLFFPC Trigger: GCATGGGAAAAAGAGACACAAGACTTCAGTAAAGAA...TGTGTGAACATGTAACAGGCACATCGATGAGAAGAAGAGTTTGAAATGCTTATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079611.13 |
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| CDS TCA 72 bp | ACCATGGCAGTCAGAGACTCTGAGAGCTGTCTGAGCTaGGAGAGCTGCTCAGGGGTGAGCAGGGAGCCAAGC | + |
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Preference number: 6 (lower is better) Translates to: TMAVRDSESCLS*ESCSGVSREPS Trigger: GCTTGGCTCCCTGCTCACCCCTGAGCAGCTCTCTCAGCTCAGACAGCTCTCAGAGTCTCTGACTGCCATGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079611.13 |
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| CDS CCA 72 bp | ACTTCCCCCGCAGAAAGCTCACCAGGCTCTTCCGAATaGGTGGTGGGTCTGTATCCTGAGGTTCTGGGCAAT | + |
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Preference number: 6 (lower is better) Translates to: TSPAESSPGSSE*VVGLYPEVLGN Trigger: ATTGCCCAGAACCTCAGGATACAGACCCACCACCCATTCGGAAGAGCCTGGTGAGCTTTCTGCGGGGGAAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079611.13 |
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| CDS CAA 72 bp | CTGCCCTCATTTCCTATTCTGACCAGGCTGGAGTCCTaGGAAGAGCGTCTTCTTTTCCTGGGTGTTTCCACC | + |
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Preference number: 6 (lower is better) Translates to: LPSFPILTRLES*EERLLFLGVST Trigger: GGTGGAAACACCCAGGAAAAGAAGACGCTCTTCCAAGGACTCCAGCCTGGTCAGAATAGGAAATGAGGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079611.13 |
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| CDS CCA 72 bp | CCAGGCTGGAGTCCTTGGAAGAGCGTCTTCTTTTCCTaGGTGTTTCCACCATCTGAGCTGATTCTTCAGTGT | + |
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Preference number: 6 (lower is better) Translates to: PGWSPWKSVFFS*VFPPSELILQC Trigger: ACACTGAAGAATCAGCTCAGATGGTGGAAACACCCAGGAAAAGAAGACGCTCTTCCAAGGACTCCAGCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079611.13 |
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| CDS TCA 72 bp | TCTGCTCATTTTTACTTGGTTCTGATCCTAATGTCCTaGCAGAGGTGGTCTGTGGTCCAGTGGGGAGGTCCA | + |
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Preference number: 6 (lower is better) Translates to: SAHFYLVLILMS*QRWSVVQWGGP Trigger: TGGACCTCCCCACTGGACCACAGACCACCTCTGTCAGGACATTAGGATCAGAACCAAGTAAAAATGAGCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079611.13 |
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| CDS TCA 72 bp | TCTTTTTCCCATGCAAGCTGCCCTCATTTCCTATTCTaGCCAGGCTGGAGTCCTTGGAAGAGCGTCTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: SFSHASCPHFLF*PGWSPWKSVFF Trigger: AAAGAAGACGCTCTTCCAAGGACTCCAGCCTGGTCAGAATAGGAAATGAGGGCAGCTTGCATGGGAAAAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079611.13 |
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| CDS TCA 72 bp | GAAGAGCGTCTTCTTTTCCTGGGTGTTTCCACCATCTaGGCTGATTCTTCAGTGTGCTTTCTGGAATTGCTG | + |
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Preference number: 6 (lower is better) Translates to: EERLLFLGVSTI*ADSSVCFLELL Trigger: CAGCAATTCCAGAAAGCACACTGAAGAATCAGCTCAGATGGTGGAAACACCCAGGAAAAGAAGACGCTCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079611.13 |
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| CDS CCA 72 bp | TTTCCACCATCTGAGCTGATTCTTCAGTGTGCTTTCTaGAATTGCTGTCTGATTGGCTGGACCTCTGCTCAT | + |
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Preference number: 6 (lower is better) Translates to: FPPSELILQCAF*NCCLIGWTSAH Trigger: ATGAGCAGAGGTCCAGCCAATCAGACAGCAATTCCAGAAAGCACACTGAAGAATCAGCTCAGATGGTGGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079611.13 |
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| CDS GCA 72 bp | CCATCTGAGCTGATTCTTCAGTGTGCTTTCTGGAATTaGTGTCTGATTGGCTGGACCTCTGCTCATTTTTAC | + |
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Preference number: 6 (lower is better) Translates to: PSELILQCAFWN*CLIGWTSAHFY Trigger: GTAAAAATGAGCAGAGGTCCAGCCAATCAGACAGCAATTCCAGAAAGCACACTGAAGAATCAGCTCAGATGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079611.13 |
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| CDS GCA 72 bp | GTCTTCTTTACTGAAGTCTTGTGTCTCTTTTTCCCATaGAAGCTGCCCTCATTTCCTATTCTGACCAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: VFFTEVLCLFFP*KLPSFPILTRL Trigger: CAGCCTGGTCAGAATAGGAAATGAGGGCAGCTTGCATGGGAAAAAGAGACACAAGACTTCAGTAAAGAAGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079611.13 |
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| CDS GCA 72 bp | TGCTTTCTGGAATTGCTGTCTGATTGGCTGGACCTCTaGTCATTTTTACTTGGTTCTGATCCTAATGTCCTG | + |
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Preference number: 6 (lower is better) Translates to: CFLELLSDWLDL*SFLLGSDPNVL Trigger: CAGGACATTAGGATCAGAACCAAGTAAAAATGAGCAGAGGTCCAGCCAATCAGACAGCAATTCCAGAAAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079611.13 |
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| CDS CCA 72 bp | CTTCAGTGTGCTTTCTGGAATTGCTGTCTGATTGGCTaGACCTCTGCTCATTTTTACTTGGTTCTGATCCTA | + |
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Preference number: 6 (lower is better) Translates to: LQCAFWNCCLIG*TSAHFYLVLIL Trigger: TAGGATCAGAACCAAGTAAAAATGAGCAGAGGTCCAGCCAATCAGACAGCAATTCCAGAAAGCACACTGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079611.13 |
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| CDS CCA 72 bp | GATTCTTCAGTGTGCTTTCTGGAATTGCTGTCTGATTaGCTGGACCTCTGCTCATTTTTACTTGGTTCTGAT | + |
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Preference number: 6 (lower is better) Translates to: DSSVCFLELLSD*LDLCSFLLGSD Trigger: ATCAGAACCAAGTAAAAATGAGCAGAGGTCCAGCCAATCAGACAGCAATTCCAGAAAGCACACTGAAGAATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079611.13 |
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