Pregenerated sensors for FRG1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000031590

Ensembl transcript IDs: ENSMUST00000033999.8

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS-3UTR TCA 90 bp	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGGGAGGAGACAAAGAAAGAAAATGGCAATAGTTCCTaGAATCTCCCCAAAGTTGGA	+
Preference number: 4 (lower is better) Translates to: ERERERERERGREETKKENGNSS*NLPKVG Trigger: TCCAACTTTGGGGAGATTTCAGGAACTATTGCCATT...TTCTTTCTTTGTCTCCTCCCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033999.8
CDS-3UTR CCA 90 bp	AAATATTTTTATTCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGGGTCAGCTTTCAATTTaGCTCTCCTGTCCAGAAGTG	+
Preference number: 4 (lower is better) Translates to: KYFYSEREREREREREREGQLSI*LSCPEV Trigger: CACTTCTGGACAGGAGAGCCAAATTGAAAGCTGACC...CTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGAATAAAAATATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033999.8
CDS-3UTR TCA 90 bp	AAATATTTTTATTCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGTTTCCGCACAGGATCTaGTCTTTATCATTTCTTCTT	+
Preference number: 4 (lower is better) Translates to: KYFYSEREREREREREREFPHRI*SLSFLL Trigger: AAGAAGAAATGATAAAGATCAGATCCTGTGCGGAAA...CTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGAATAAAAATATTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033999.8
CDS-3UTR CAA 90 bp	CAAATATTTTTATTCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGACGGTCAGCTTTCAATTaGGCTCTCCTGTCCAGAAGT	+
Preference number: 5 (lower is better) Translates to: QIFLFREREREREREREGRSAFN*ALLSRS Trigger: ACTTCTGGACAGGAGAGCCAAATTGAAAGCTGACCG...TCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGAATAAAAATATTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033999.8
CDS-3UTR CAA 90 bp	ATCAAATATTTTTATTCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGTCCCACAATATCAAGTaGGGTCTCCTCGTCTTCTTC	+
Preference number: 5 (lower is better) Translates to: IKYFYSERERERERERERSHNIK*GLLVFF Trigger: GAAGAAGACGAGGAGACCCAACTTGATATTGTGGGA...CCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGAATAAAAATATTTGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033999.8
CDS-3UTR CAA 90 bp	ATCAAATATTTTTATTCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGCTGCCGTCTTATTCTTaGCTTCTATATCGCCTGCTT	+
Preference number: 5 (lower is better) Translates to: IKYFYSERERERERERERLPSYS*LLYRLL Trigger: AAGCAGGCGATATAGAAGCAAAGAATAAGACGGCAG...CCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGAATAAAAATATTTGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033999.8
CDS-3UTR CAA 90 bp	CAAATATTTTTATTCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGATTTTTCTTTTTACTCTaGGCTTTAGTGCCCTTGAGC	+
Preference number: 5 (lower is better) Translates to: QIFLFREREREREREREGFFFLL*ALVPLS Trigger: GCTCAAGGGCACTAAAGCCAAGAGTAAAAAGAAAAA...TCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGAATAAAAATATTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000033999.8
CDS CAA 72 bp	GTTGGATACAGTCCACCAGATTCCCACAATATCAAGTaGGGTCTCCTCGTCTTCTTCCCGTTTTCTCTTCTT	+
Preference number: 6 (lower is better) Translates to: VGYSPPDSHNIK*GLLVFFPFSLL Trigger: AAGAAGAGAAAACGGGAAGAAGACGAGGAGACCCAACTTGATATTGTGGGAATCTGGTGGACTGTATCCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033999.8

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