Pregenerated sensors for FPR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045551Ensembl transcript IDs: ENSMUST00000061516.8
Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | ATGCCTATAGCACAGTGGAACTCAAAGCAGATGAAGCTGGAAGTTAGAGCCCGTATCACTGGTCTGAGCTaGGTCCTCAGTCAGGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: MPIAQWNSKQMKLEVRARITGLS*VLSQGP Trigger: AGGGCCCTGACTGAGGACTCAGCTCAGACCAGTGAT...ACGGGCTCTAACTTCCAGCTTCATCTGCTTTGAGTTCCACTGTGCTATAGGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061516.8 |
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| CDS-3UTR TCA 90 bp | CCTGAAGGTCAACAGGGAATGCCTATAGCACAGTGGAACTCAAAGCAGATGAAGATGAGGGCCACTACTTaGAATGGGCACCAGCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: PEGQQGMPIAQWNSKQMKMRATT*NGHQQR Trigger: CCTCTGCTGGTGCCCATTTCAAGTAGTGGCCCTCAT...CTTCATCTGCTTTGAGTTCCACTGTGCTATAGGCATTCCCTGTTGACCTTCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061516.8 |
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| CDS-3UTR GCA 90 bp | TCAACAGGGAATGCCTATAGCACAGTGGAACTCAAAGCAGATGAAGCTGGAAGTTGGCTAGGCTCACAGTaGGGTGGTTCTGAGCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: STGNAYSTVELKADEAGSWLGSQ*GGSEPR Trigger: TCTGGGCTCAGAACCACCGCACTGTGAGCCTAGCCA...ACTTCCAGCTTCATCTGCTTTGAGTTCCACTGTGCTATAGGCATTCCCTGTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061516.8 |
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| CDS-3UTR TCA 90 bp | TCAACAGGGAATGCCTATAGCACAGTGGAACTCAAAGCAGATGAAGCTGGAAGTAAGGACGGCTGGATTTaGTCAGGCCCTGCCTGTGAA | + |
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Preference number: 4 (lower is better) Translates to: STGNAYSTVELKADEAGSKDGWI*SGPACE Trigger: TTCACAGGCAGGGCCTGATCAAATCCAGCCGTCCTT...ACTTCCAGCTTCATCTGCTTTGAGTTCCACTGTGCTATAGGCATTCCCTGTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061516.8 |
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| CDS-3UTR TCA 90 bp | ATGCCTATAGCACAGTGGAACTCAAAGCAGATGAAGCTGGAAGTTAGAGCCCGTGCCAATGTCCTCCCATaGCCATGCTGGCAATGTAAA | + |
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Preference number: 4 (lower is better) Translates to: MPIAQWNSKQMKLEVRARANVLP*PCWQCK Trigger: TTTACATTGCCAGCATGGTCATGGGAGGACATTGGC...ACGGGCTCTAACTTCCAGCTTCATCTGCTTTGAGTTCCACTGTGCTATAGGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061516.8 |
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| CDS-3UTR GCA 90 bp | CCTGAAGGTCAACAGGGAATGCCTATAGCACAGTGGAACTCAAAGCAGATGAAGTGGTCCCCAAATTGGTaGCTGTATCACTGGTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: PEGQQGMPIAQWNSKQMKWSPNW*LYHWSE Trigger: CTCAGACCAGTGATACAGGCACCAATTTGGGGACCA...CTTCATCTGCTTTGAGTTCCACTGTGCTATAGGCATTCCCTGTTGACCTTCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061516.8 |
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| CDS-3UTR TCA 90 bp | CCTGAAGGTCAACAGGGAATGCCTATAGCACAGTGGAACTCAAAGCAGATGAAGGTAGCCAGCAGATACTaGTTGAGTACTCCCAGATAC | + |
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Preference number: 4 (lower is better) Translates to: PEGQQGMPIAQWNSKQMKVASRY*LSTPRY Trigger: GTATCTGGGAGTACTCAATCAGTATCTGCTGGCTAC...CTTCATCTGCTTTGAGTTCCACTGTGCTATAGGCATTCCCTGTTGACCTTCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061516.8 |
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| CDS-3UTR TCA 90 bp | CCTGAAGGTCAACAGGGAATGCCTATAGCACAGTGGAACTCAAAGCAGATGAAGAGTAAGAGATGGTGGTaGCAGTGTGTTTCATGCGGA | + |
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Preference number: 4 (lower is better) Translates to: PEGQQGMPIAQWNSKQMKSKRWW*QCVSCG Trigger: TCCGCATGAAACACACTGTCACCACCATCTCTTACT...CTTCATCTGCTTTGAGTTCCACTGTGCTATAGGCATTCCCTGTTGACCTTCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061516.8 |
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| CDS-3UTR CCA 90 bp | ATGCCTATAGCACAGTGGAACTCAAAGCAGATGAAGCTGGAAGTTAGAGCCCGTAGTTGGTCCCCAAATTaGTGCCTGTATCACTGGTCT | + |
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Preference number: 4 (lower is better) Translates to: MPIAQWNSKQMKLEVRARSWSPN*CLYHWS Trigger: AGACCAGTGATACAGGCACCAATTTGGGGACCAACT...ACGGGCTCTAACTTCCAGCTTCATCTGCTTTGAGTTCCACTGTGCTATAGGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061516.8 |
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| CDS-3UTR TCA 90 bp | ATGCCTATAGCACAGTGGAACTCAAAGCAGATGAAGCTGGAAGTTAGAGCCCGTCCCCAAGGACAAATGTaGCGGCAAAGATCAAATATG | + |
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Preference number: 4 (lower is better) Translates to: MPIAQWNSKQMKLEVRARPQGQM*RQRSNM Trigger: CATATTTGATCTTTGCCGTCACATTTGTCCTTGGGG...ACGGGCTCTAACTTCCAGCTTCATCTGCTTTGAGTTCCACTGTGCTATAGGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061516.8 |
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| CDS-3UTR TCA 90 bp | ATGCCTATAGCACAGTGGAACTCAAAGCAGATGAAGCTGGAAGTTAGAGCCCGTATGGCAAAGTGGAAGTaGAGCAAAAGTCAGCAATGG | + |
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Preference number: 4 (lower is better) Translates to: MPIAQWNSKQMKLEVRARMAKWK*SKSQQW Trigger: CCATTGCTGACTTTTGCTTCACTTCCACTTTGCCAT...ACGGGCTCTAACTTCCAGCTTCATCTGCTTTGAGTTCCACTGTGCTATAGGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061516.8 |
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| CDS-3UTR TCA 90 bp | ATGCCTATAGCACAGTGGAACTCAAAGCAGATGAAGCTGGAAGTTAGAGCCCGTCTTGGATTGTGGATATaGGGGCCACTACTTGAAATG | + |
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Preference number: 4 (lower is better) Translates to: MPIAQWNSKQMKLEVRARLGLWI*GPLLEM Trigger: CATTTCAAGTAGTGGCCCTCATATCCACAATCCAAG...ACGGGCTCTAACTTCCAGCTTCATCTGCTTTGAGTTCCACTGTGCTATAGGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061516.8 |
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| CDS-3UTR CCA 90 bp | TCAACAGGGAATGCCTATAGCACAGTGGAACTCAAAGCAGATGAAGCTGGAAGTCATGAACCAACCAAATaGCCAATGTCCTCCCATGAC | + |
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Preference number: 4 (lower is better) Translates to: STGNAYSTVELKADEAGSHEPTK*PMSSHD Trigger: GTCATGGGAGGACATTGGCCATTTGGTTGGTTCATG...ACTTCCAGCTTCATCTGCTTTGAGTTCCACTGTGCTATAGGCATTCCCTGTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061516.8 |
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| CDS-3UTR CCA 90 bp | ATGCCTATAGCACAGTGGAACTCAAAGCAGATGAAGCTGGAAGTTAGAGCCCGTGTTCTGAGCCCAGACTaGATGCAGAACACAAATACA | + |
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Preference number: 4 (lower is better) Translates to: MPIAQWNSKQMKLEVRARVLSPD*MQNTNT Trigger: TGTATTTGTGTTCTGCATCCAGTCTGGGCTCAGAAC...ACGGGCTCTAACTTCCAGCTTCATCTGCTTTGAGTTCCACTGTGCTATAGGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061516.8 |
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| CDS-3UTR CCA 90 bp | TCAACAGGGAATGCCTATAGCACAGTGGAACTCAAAGCAGATGAAGCTGGAAGTGGCCACTACTTGAAATaGGCACCAGCAGAGGAAAAA | + |
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Preference number: 4 (lower is better) Translates to: STGNAYSTVELKADEAGSGHYLK*APAEEK Trigger: TTTTTCCTCTGCTGGTGCCCATTTCAAGTAGTGGCC...ACTTCCAGCTTCATCTGCTTTGAGTTCCACTGTGCTATAGGCATTCCCTGTTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061516.8 |
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| CDS-3UTR CCA 90 bp | ATGCCTATAGCACAGTGGAACTCAAAGCAGATGAAGCTGGAAGTTAGAGCCCGTAGCAGTTACAATGCCTaGAGTCATGTTCTTCAACCG | + |
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Preference number: 4 (lower is better) Translates to: MPIAQWNSKQMKLEVRARSSYNA*SHVLQP Trigger: CGGTTGAAGAACATGACTCCAGGCATTGTAACTGCT...ACGGGCTCTAACTTCCAGCTTCATCTGCTTTGAGTTCCACTGTGCTATAGGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061516.8 |
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| CDS-3UTR TCA 90 bp | CCTGAAGGTCAACAGGGAATGCCTATAGCACAGTGGAACTCAAAGCAGATGAAGATCAGGCCCTGCCTGTaGATTTTAGTGGTTATTAAC | + |
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Preference number: 4 (lower is better) Translates to: PEGQQGMPIAQWNSKQMKIRPCL*ILVVIN Trigger: GTTAATAACCACTAAAATTCACAGGCAGGGCCTGAT...CTTCATCTGCTTTGAGTTCCACTGTGCTATAGGCATTCCCTGTTGACCTTCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061516.8 |
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| CDS-3UTR GCA 90 bp | ATGCCTATAGCACAGTGGAACTCAAAGCAGATGAAGCTGGAAGTTAGAGCCCGTATTCATGAGGTTCACTaGAGACTTGTTCATGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: MPIAQWNSKQMKLEVRARIHEVH*RLVHEE Trigger: CTCCTCATGAACAAGTCTGCAGTGAACCTCATGAAT...ACGGGCTCTAACTTCCAGCTTCATCTGCTTTGAGTTCCACTGTGCTATAGGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061516.8 |
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| CDS-3UTR CCA 90 bp | CCTGAAGGTCAACAGGGAATGCCTATAGCACAGTGGAACTCAAAGCAGATGAAGCTGGCAGGTAAAGAGTaGATTAGTCTTTCTCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: PEGQQGMPIAQWNSKQMKLAGKE*ISLSLK Trigger: CTTCAGAGAAAGACTAATCCACTCTTTACCTGCCAG...CTTCATCTGCTTTGAGTTCCACTGTGCTATAGGCATTCCCTGTTGACCTTCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061516.8 |
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| CDS-3UTR TCA 90 bp | TCAACAGGGAATGCCTATAGCACAGTGGAACTCAAAGCAGATGAAGCTGGAAGTAAGCCAAGGGGCTTGTaGTTTTCAAAGCAGTTACAA | + |
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Preference number: 4 (lower is better) Translates to: STGNAYSTVELKADEAGSKPRGL*FSKQLQ Trigger: TTGTAACTGCTTTGAAAATCACAAGCCCCTTGGCTT...ACTTCCAGCTTCATCTGCTTTGAGTTCCACTGTGCTATAGGCATTCCCTGTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061516.8 |
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| CDS-3UTR GCA 90 bp | ATGCCTATAGCACAGTGGAACTCAAAGCAGATGAAGCTGGAAGTTAGAGCCCGTTCAAAGCAGTTACAATaGCTGGAGTCATGTTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: MPIAQWNSKQMKLEVRARSKQLQ*LESCSS Trigger: TGAAGAACATGACTCCAGGCATTGTAACTGCTTTGA...ACGGGCTCTAACTTCCAGCTTCATCTGCTTTGAGTTCCACTGTGCTATAGGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061516.8 |
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| CDS-3UTR CCA 90 bp | ATGCCTATAGCACAGTGGAACTCAAAGCAGATGAAGCTGGAAGTTAGAGCCCGTAGCAAAAGTCAGCAATaGCCAAGTTCAAGTAAGAGA | + |
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Preference number: 4 (lower is better) Translates to: MPIAQWNSKQMKLEVRARSKSQQ*PSSSKR Trigger: TCTCTTACTTGAACTTGGCCATTGCTGACTTTTGCT...ACGGGCTCTAACTTCCAGCTTCATCTGCTTTGAGTTCCACTGTGCTATAGGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061516.8 |
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| CDS-3UTR CCA 90 bp | TCAACAGGGAATGCCTATAGCACAGTGGAACTCAAAGCAGATGAAGCTGGAAGTGCTGGCAATGTAAAATaGCAAAGTGGAAGTGAAGCA | + |
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Preference number: 4 (lower is better) Translates to: STGNAYSTVELKADEAGSAGNVK*QSGSEA Trigger: TGCTTCACTTCCACTTTGCCATTTTACATTGCCAGC...ACTTCCAGCTTCATCTGCTTTGAGTTCCACTGTGCTATAGGCATTCCCTGTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061516.8 |
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| CDS-3UTR CCA 90 bp | TCAACAGGGAATGCCTATAGCACAGTGGAACTCAAAGCAGATGAAGCTGGAAGTTTAACCCATAGCAAATaGCAACAATGGACATGGGAG | + |
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Preference number: 4 (lower is better) Translates to: STGNAYSTVELKADEAGSLTHSK*QQWTWE Trigger: CTCCCATGTCCATTGTTGCCATTTGCTATGGGTTAA...ACTTCCAGCTTCATCTGCTTTGAGTTCCACTGTGCTATAGGCATTCCCTGTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061516.8 |
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| CDS-3UTR GCA 90 bp | TCAACAGGGAATGCCTATAGCACAGTGGAACTCAAAGCAGATGAAGCTGGAAGTCAATGTAAGAAGAAATaGACAAATCCAGGGTACGAT | + |
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Preference number: 4 (lower is better) Translates to: STGNAYSTVELKADEAGSQCKKK*TNPGYD Trigger: ATCGTACCCTGGATTTGTGCATTTCTTCTTACATTG...ACTTCCAGCTTCATCTGCTTTGAGTTCCACTGTGCTATAGGCATTCCCTGTTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061516.8 |
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| CDS-3UTR CAA 90 bp | CCTGAAGGTCAACAGGGAATGCCTATAGCACAGTGGAACTCAAAGCAGATGAAGCAGATCACGAGCCCGTaGCCCAGAACCCCAAGGACA | + |
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Preference number: 5 (lower is better) Translates to: PEGQQGMPIAQWNSKQMKQITSP*PRTPRT Trigger: TGTCCTTGGGGTTCTGGGCAACGGGCTCGTGATCTG...CTTCATCTGCTTTGAGTTCCACTGTGCTATAGGCATTCCCTGTTGACCTTCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061516.8 |
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| CDS-3UTR CAA 90 bp | TCAACAGGGAATGCCTATAGCACAGTGGAACTCAAAGCAGATGAAGCTGGAAGTACGATGATTACCTTCTaGGCTAGGCTCACAGTGCGG | + |
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Preference number: 5 (lower is better) Translates to: STGNAYSTVELKADEAGSTMITF*ARLTVR Trigger: CCGCACTGTGAGCCTAGCCAAGAAGGTAATCATCGT...ACTTCCAGCTTCATCTGCTTTGAGTTCCACTGTGCTATAGGCATTCCCTGTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061516.8 |
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| CDS-3UTR CAA 90 bp | TCAACAGGGAATGCCTATAGCACAGTGGAACTCAAAGCAGATGAAGCTGGAAGTTTCTCTACAGGATCTTaGGTCCAGGGGGAGAAGTCG | + |
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Preference number: 5 (lower is better) Translates to: STGNAYSTVELKADEAGSFSTGS*VQGEKS Trigger: CGACTTCTCCCCCTGGACCAAAGATCCTGTAGAGAA...ACTTCCAGCTTCATCTGCTTTGAGTTCCACTGTGCTATAGGCATTCCCTGTTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061516.8 |
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| CDS CCA 90 bp | ATCTTTGGTCCAGGGGGAGAAGTCGAAAGTACAGGCTGTTTTCCCTaGTCCAAGTCTACTATTAGGGACTGTGGTCAAACGAATGATAAC | + |
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Preference number: 5 (lower is better) Translates to: IFGPGGEVESTGCFP*SKSTIRDCGQTNDN Trigger: GTTATCATTCGTTTGACCACAGTCCCTAATAGTAGACTTGGACCAGGGAAAACAGCCTGTACTTTCGACTTCTCCCCCTGGACCAAAGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061516.8 |
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| CDS-3UTR CAA 90 bp | TCAACAGGGAATGCCTATAGCACAGTGGAACTCAAAGCAGATGAAGCTGGAAGTAGGTTCACTGCAGACTaGTTCATGAGGAGAGACATG | + |
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Preference number: 5 (lower is better) Translates to: STGNAYSTVELKADEAGSRFTAD*FMRRDM Trigger: CATGTCTCTCCTCATGAACAAGTCTGCAGTGAACCT...ACTTCCAGCTTCATCTGCTTTGAGTTCCACTGTGCTATAGGCATTCCCTGTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061516.8 |
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| CDS CCA 90 bp | GAAGAAAGCCAAGGGGCTTGTGATTTTCAAAGCAGTTACAATGCCTaGAGTCATGTTCTTCAACCGTTCACGGACTTGGATTGTGGATAT | + |
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Preference number: 5 (lower is better) Translates to: EESQGACDFQSSYNA*SHVLQPFTDLDCGY Trigger: ATATCCACAATCCAAGTCCGTGAACGGTTGAAGAACATGACTCCAGGCATTGTAACTGCTTTGAAAATCACAAGCCCCTTGGCTTTCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061516.8 |
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| CDS CCA 90 bp | TATGTCTATTACAGTATATATGAATTTGCACATGAACCAACCAAATaGCCAATGTCCTCCCATGACCATGCTGGCAATGTAAAATGGCAA | + |
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Preference number: 5 (lower is better) Translates to: YVYYSIYEFAHEPTK*PMSSHDHAGNVKWQ Trigger: TTGCCATTTTACATTGCCAGCATGGTCATGGGAGGACATTGGCCATTTGGTTGGTTCATGTGCAAATTCATATATACTGTAATAGACATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061516.8 |
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| CDS CAA 72 bp | ATGGTGACGGCCACCTTCCTCTTCTCTACAGGATCTTaGGTCCAGGGGGAGAAGTCGAAAGTACAGGCTGTT | + |
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Preference number: 6 (lower is better) Translates to: MVTATFLFSTGS*VQGEKSKVQAV Trigger: AACAGCCTGTACTTTCGACTTCTCCCCCTGGACCAAAGATCCTGTAGAGAAGAGGAAGGTGGCCGTCACCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061516.8 |
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| CDS TCA 72 bp | TCACGGACTTGGATTGTGGATATGAGGGCCACTACTTaGAATGGGCACCAGCAGAGGAAAAAGGCAGCCACA | + |
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Preference number: 6 (lower is better) Translates to: SRTWIVDMRATT*NGHQQRKKAAT Trigger: TGTGGCTGCCTTTTTCCTCTGCTGGTGCCCATTTCAAGTAGTGGCCCTCATATCCACAATCCAAGTCCGTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061516.8 |
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| CDS CAA 72 bp | TTCACGGACTTGGATTGTGGATATGAGGGCCACTACTaGAAATGGGCACCAGCAGAGGAAAAAGGCAGCCAC | + |
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Preference number: 6 (lower is better) Translates to: FTDLDCGYEGHY*KWAPAEEKGSH Trigger: GTGGCTGCCTTTTTCCTCTGCTGGTGCCCATTTCAAGTAGTGGCCCTCATATCCACAATCCAAGTCCGTGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061516.8 |
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| CDS TCA 72 bp | TGTTCTTCAACCGTTCACGGACTTGGATTGTGGATATaGGGGCCACTACTTGAAATGGGCACCAGCAGAGGA | + |
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Preference number: 6 (lower is better) Translates to: CSSTVHGLGLWI*GPLLEMGTSRG Trigger: TCCTCTGCTGGTGCCCATTTCAAGTAGTGGCCCTCATATCCACAATCCAAGTCCGTGAACGGTTGAAGAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061516.8 |
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| CDS CCA 72 bp | GACTTGGATTGTGGATATGAGGGCCACTACTTGAAATaGGCACCAGCAGAGGAAAAAGGCAGCCACAACAAA | + |
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Preference number: 6 (lower is better) Translates to: DLDCGYEGHYLK*APAEEKGSHNK Trigger: TTTGTTGTGGCTGCCTTTTTCCTCTGCTGGTGCCCATTTCAAGTAGTGGCCCTCATATCCACAATCCAAGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061516.8 |
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| CDS CCA 72 bp | TACAGTATATATGAATTTGCACATGAACCAACCAAATaGCCAATGTCCTCCCATGACCATGCTGGCAATGTA | + |
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Preference number: 6 (lower is better) Translates to: YSIYEFAHEPTK*PMSSHDHAGNV Trigger: TACATTGCCAGCATGGTCATGGGAGGACATTGGCCATTTGGTTGGTTCATGTGCAAATTCATATATACTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061516.8 |
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