Pregenerated sensors for FPGS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000009566Ensembl transcript IDs: ENSMUST00000028148.11, ENSMUST00000127812.3, ENSMUST00000143743.2, ENSMUST00000146498.8
Found 170 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGGAGATGGGCCAGGCTGAAAGCCTGCTACGATGGTGGGGACTCTaGGAAGCACCCTGCTGTCTCTGCCAGAGGAAGGAGAGGCCGAGG | + |
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Preference number: 1 (lower is better) Translates to: REMGQAESLLRWWGL*EAPCCLCQRKERPR Trigger: CCTCGGCCTCTCCTTCCTCTGGCAGAGACAGCAGGGTGCTTCCCAGAGTCCCCACCATCGTAGCAGGCTTTCAGCCTGGCCCATCTCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| 3UTR CCA 90 bp | GGAGGCAGCAGGGAGATGGGCCAGGCTGAAAGCCTGCTACGATGGTaGGGACTCTGGGAAGCACCCTGCTGTCTCTGCCAGAGGAAGGAG | + |
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Preference number: 1 (lower is better) Translates to: GGSREMGQAESLLRW*GLWEAPCCLCQRKE Trigger: CTCCTTCCTCTGGCAGAGACAGCAGGGTGCTTCCCAGAGTCCCCACCATCGTAGCAGGCTTTCAGCCTGGCCCATCTCCCTGCTGCCTCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| 3UTR CCA 90 bp | CCTGGAGGCAGCAGGGAGATGGGCCAGGCTGAAAGCCTGCTACGATaGTGGGGACTCTGGGAAGCACCCTGCTGTCTCTGCCAGAGGAAG | + |
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Preference number: 1 (lower is better) Translates to: PGGSREMGQAESLLR*WGLWEAPCCLCQRK Trigger: CTTCCTCTGGCAGAGACAGCAGGGTGCTTCCCAGAGTCCCCACCATCGTAGCAGGCTTTCAGCCTGGCCCATCTCCCTGCTGCCTCCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| 3UTR CCA 90 bp | AGGGCTTCCAATGGCGGACACAGGTACAACGGGCATCCAATCTGCTaGGCTCGATCCCTCAGCACAGCCAGGGGACCTTCTGGCTGCACC | + |
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Preference number: 1 (lower is better) Translates to: RASNGGHRYNGHPIC*ARSLSTARGPSGCT Trigger: GGTGCAGCCAGAAGGTCCCCTGGCTGTGCTGAGGGATCGAGCCCAGCAGATTGGATGCCCGTTGTACCTGTGTCCGCCATTGGAAGCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146498.8 |
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| 3UTR GCA 90 bp | CAGGCTGAAAGCCTGCTACGATGGTGGGGACTCTGGGAAGCACCCTaGTGTCTCTGCCAGAGGAAGGAGAGGCCGAGGTACAGAGAGCCT | + |
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Preference number: 1 (lower is better) Translates to: QAESLLRWWGLWEAP*CLCQRKERPRYREP Trigger: AGGCTCTCTGTACCTCGGCCTCTCCTTCCTCTGGCAGAGACAGCAGGGTGCTTCCCAGAGTCCCCACCATCGTAGCAGGCTTTCAGCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| 3UTR GCA 90 bp | ATCTGCTGGGCTCGATCCCTCAGCACAGCCAGGGGACCTTCTGGCTaGACCACAGTGAAGGCAGGGACACCAGGCTTAAAGATGCCCCCT | + |
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Preference number: 1 (lower is better) Translates to: ICWARSLSTARGPSG*TTVKAGTPGLKMPP Trigger: AGGGGGCATCTTTAAGCCTGGTGTCCCTGCCTTCACTGTGGTGCAGCCAGAAGGTCCCCTGGCTGTGCTGAGGGATCGAGCCCAGCAGAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146498.8 |
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| 3UTR CCA 90 bp | TCCAATCTGCTGGGCTCGATCCCTCAGCACAGCCAGGGGACCTTCTaGCTGCACCACAGTGAAGGCAGGGACACCAGGCTTAAAGATGCC | + |
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Preference number: 1 (lower is better) Translates to: SNLLGSIPQHSQGTF*LHHSEGRDTRLKDA Trigger: GGCATCTTTAAGCCTGGTGTCCCTGCCTTCACTGTGGTGCAGCCAGAAGGTCCCCTGGCTGTGCTGAGGGATCGAGCCCAGCAGATTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146498.8 |
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| 3UTR CCA 90 bp | GTCCCCAAATGCCAGGCAAGGGCCCTCTCTTTTGCCAGAAAGCATTaGGAGGGAGGAGGAGGTCTCTGGTCTAACCTCAGGCAGGATCCA | + |
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Preference number: 1 (lower is better) Translates to: VPKCQARALSFARKH*EGGGGLWSNLRQDP Trigger: TGGATCCTGCCTGAGGTTAGACCAGAGACCTCCTCCTCCCTCCCAATGCTTTCTGGCAAAAGAGAGGGCCCTTGCCTGGCATTTGGGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| 3UTR-3UTR TCA 90 bp | CAGGGCTTCCAATGGCGGACACAGGTACAACGGGCATCCAATCTGCTGGGCTCGCTGGCTGCACCACAGTaGAGGCAGGGACACCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: QGFQWRTQVQRASNLLGSLAAPQ*RQGHQA Trigger: AGCCTGGTGTCCCTGCCTTCACTGTGGTGCAGCCAG...CGAGCCCAGCAGATTGGATGCCCGTTGTACCTGTGTCCGCCATTGGAAGCCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146498.8 |
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| 3UTR-3UTR TCA 90 bp | CTCAGGCAGGATCCAGGCTGCTCAGGCAGCTGCAACAGTAAGCTGGACCTGAGCGGAGATGGGCCAGGCTaGAAGCCTGCTACGATGGTG | + |
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Preference number: 2 (lower is better) Translates to: LRQDPGCSGSCNSKLDLSGDGPG*KPATMV Trigger: CACCATCGTAGCAGGCTTTCAGCCTGGCCCATCTCC...GCTCAGGTCCAGCTTACTGTTGCAGCTGCCTGAGCAGCCTGGATCCTGCCTGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| 3UTR-3UTR TCA 90 bp | AATGCCAGGCAAGGGCCCTCTCTTTTGCCAGAAAGCATTGGGAGGGAGGAGGAGACAGTAAGCTGGACCTaGGCCTGGAGGCAGCAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: NARQGPSLLPESIGREEETVSWT*AWRQQG Trigger: TCCCTGCTGCCTCCAGGCTCAGGTCCAGCTTACTGT...CTCCTCCTCCCTCCCAATGCTTTCTGGCAAAAGAGAGGGCCCTTGCCTGGCATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| 3UTR-3UTR GCA 90 bp | ACAGCCAGGGGACCTTCTGGCTGCACCACAGTGAAGGCAGGGACACCAGGCTTAAAGATGCCCCCTTTCTaGCATGCTATTTTCTCCACT | + |
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Preference number: 2 (lower is better) Translates to: TARGPSGCTTVKAGTPGLKMPPF*HAIFST Trigger: AGTGGAGAAAATAGCATGGCAGAAAGGGGGCATCTT...TAAGCCTGGTGTCCCTGCCTTCACTGTGGTGCAGCCAGAAGGTCCCCTGGCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000146498.8 |
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| 3UTR-3UTR CCA 90 bp | CTTCAATTAGTTCCAGCAACACAGTCCCCAAATGCCAGGCAAGGGCCCTCTCTTGAAAGCCTGCTACGATaGTGGGGACTCTGGGAAGCA | + |
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Preference number: 2 (lower is better) Translates to: LQLVPATQSPNARQGPSLESLLR*WGLWEA Trigger: TGCTTCCCAGAGTCCCCACCATCGTAGCAGGCTTTC...AAGAGAGGGCCCTTGCCTGGCATTTGGGGACTGTGTTGCTGGAACTAATTGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| 3UTR GCA 72 bp | AGCCTGCTACGATGGTGGGGACTCTGGGAAGCACCCTaGTGTCTCTGCCAGAGGAAGGAGAGGCCGAGGTAC | + |
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Preference number: 3 (lower is better) Translates to: SLLRWWGLWEAP*CLCQRKERPRY Trigger: GTACCTCGGCCTCTCCTTCCTCTGGCAGAGACAGCAGGGTGCTTCCCAGAGTCCCCACCATCGTAGCAGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| 3UTR CCA 72 bp | AGGGAGATGGGCCAGGCTGAAAGCCTGCTACGATGGTaGGGACTCTGGGAAGCACCCTGCTGTCTCTGCCAG | + |
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Preference number: 3 (lower is better) Translates to: REMGQAESLLRW*GLWEAPCCLCQ Trigger: CTGGCAGAGACAGCAGGGTGCTTCCCAGAGTCCCCACCATCGTAGCAGGCTTTCAGCCTGGCCCATCTCCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| 3UTR GCA 72 bp | GCTCGATCCCTCAGCACAGCCAGGGGACCTTCTGGCTaGACCACAGTGAAGGCAGGGACACCAGGCTTAAAG | + |
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Preference number: 3 (lower is better) Translates to: ARSLSTARGPSG*TTVKAGTPGLK Trigger: CTTTAAGCCTGGTGTCCCTGCCTTCACTGTGGTGCAGCCAGAAGGTCCCCTGGCTGTGCTGAGGGATCGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146498.8 |
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| 3UTR GCA 72 bp | TCCAATGGCGGACACAGGTACAACGGGCATCCAATCTaGTGGGCTCGATCCCTCAGCACAGCCAGGGGACCT | + |
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Preference number: 3 (lower is better) Translates to: SNGGHRYNGHPI*WARSLSTARGP Trigger: AGGTCCCCTGGCTGTGCTGAGGGATCGAGCCCAGCAGATTGGATGCCCGTTGTACCTGTGTCCGCCATTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146498.8 |
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| 3UTR GCA 72 bp | GGAGGTCTCTGGTCTAACCTCAGGCAGGATCCAGGCTaGTCAGGCAGCTGCAACAGTAAGCTGGACCTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: GGLWSNLRQDPG*SGSCNSKLDLS Trigger: GCTCAGGTCCAGCTTACTGTTGCAGCTGCCTGAGCAGCCTGGATCCTGCCTGAGGTTAGACCAGAGACCTCC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| 3UTR CCA 72 bp | AATGGCGGACACAGGTACAACGGGCATCCAATCTGCTaGGCTCGATCCCTCAGCACAGCCAGGGGACCTTCT | + |
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Preference number: 3 (lower is better) Translates to: NGGHRYNGHPIC*ARSLSTARGPS Trigger: AGAAGGTCCCCTGGCTGTGCTGAGGGATCGAGCCCAGCAGATTGGATGCCCGTTGTACCTGTGTCCGCCATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146498.8 |
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| 3UTR CCA 72 bp | TGCCAGGCAAGGGCCCTCTCTTTTGCCAGAAAGCATTaGGAGGGAGGAGGAGGTCTCTGGTCTAACCTCAGG | + |
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Preference number: 3 (lower is better) Translates to: CQARALSFARKH*EGGGGLWSNLR Trigger: CCTGAGGTTAGACCAGAGACCTCCTCCTCCCTCCCAATGCTTTCTGGCAAAAGAGAGGGCCCTTGCCTGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| 3UTR GCA 72 bp | AAAGCTTCAATTAGTTCCAGCAACACAGTCCCCAAATaGCAGGCAAGGGCCCTCTCTTTTGCCAGAAAGCAT | + |
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Preference number: 3 (lower is better) Translates to: KASISSSNTVPK*QARALSFARKH Trigger: ATGCTTTCTGGCAAAAGAGAGGGCCCTTGCCTGGCATTTGGGGACTGTGTTGCTGGAACTAATTGAAGCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS-3UTR GCA 90 bp | GAGCCTGGAGGCAGCAGGGAGATGGGCCAGGCTGAAAGCCTGCTACGATGGTGGAGGGCGGAACACAGGTaGCAGGGGCAGCTGCCACCG | + |
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Preference number: 4 (lower is better) Translates to: EPGGSREMGQAESLLRWWRAEHR*QGQLPP Trigger: CGGTGGCAGCTGCCCCTGGCACCTGTGTTCCGCCCT...CCACCATCGTAGCAGGCTTTCAGCCTGGCCCATCTCCCTGCTGCCTCCAGGCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS-3UTR CCA 90 bp | CCTGGAGGCAGCAGGGAGATGGGCCAGGCTGAAAGCCTGCTACGATGGTGGGGACATGCCCGGCTCCTGTaGCGCTGGCCACGCGCTCAT | + |
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Preference number: 4 (lower is better) Translates to: PGGSREMGQAESLLRWWGHARLL*RWPRAH Trigger: ATGAGCGCGTGGCCAGCGCCACAGGAGCCGGGCATG...TCCCCACCATCGTAGCAGGCTTTCAGCCTGGCCCATCTCCCTGCTGCCTCCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS-3UTR CCA 90 bp | GAGCCTGGAGGCAGCAGGGAGATGGGCCAGGCTGAAAGCCTGCTACGATGGTGGCCTAGTAGGCTGAGGTaGGTGCGGGGCCAGCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: EPGGSREMGQAESLLRWWPSRLR*VRGQQQ Trigger: CTGCTGCTGGCCCCGCACCCACCTCAGCCTACTAGG...CCACCATCGTAGCAGGCTTTCAGCCTGGCCCATCTCCCTGCTGCCTCCAGGCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS-3UTR TCA 90 bp | GTACAGAGAGCCTCTCCCATCCCTACACTCTACCAAGAGCCCAGGACCCTGGGCCTCGTCCTAGTAGGCTaGGGTGGGTGCGGGGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: VQRASPIPTLYQEPRTLGLVLVG*GGCGAS Trigger: GCTGGCCCCGCACCCACCTCAGCCTACTAGGACGAG...GCCCAGGGTCCTGGGCTCTTGGTAGAGTGTAGGGATGGGAGAGGCTCTCTGTAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS-3UTR GCA 90 bp | CCTGGAGGCAGCAGGGAGATGGGCCAGGCTGAAAGCCTGCTACGATGGTGGGGATCCATAGCCTCCAGCTaGGCCTGGGGGTCACTCCGT | + |
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Preference number: 4 (lower is better) Translates to: PGGSREMGQAESLLRWWGSIASS*AWGSLR Trigger: ACGGAGTGACCCCCAGGCGCAGCTGGAGGCTATGGA...TCCCCACCATCGTAGCAGGCTTTCAGCCTGGCCCATCTCCCTGCTGCCTCCAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS-3UTR GCA 90 bp | CTGGAGGCAGCAGGGAGATGGGCCAGGCTGAAAGCCTGCTACGATGGTGGGGACCAGCCTCACGGAGAATaGTGGCCCCGCTGTTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: LEAAGRWARLKACYDGGDQPHGE*WPRCWL Trigger: CAGCCAACAGCGGGGCCAGCATTCTCCGTGAGGCTG...GTCCCCACCATCGTAGCAGGCTTTCAGCCTGGCCCATCTCCCTGCTGCCTCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS-3UTR CCA 90 bp | AGGCAAGGGCCCTCTCTTTTGCCAGAAAGCATTGGGAGGGAGGAGGAGGTCTCTCGGCTCCTGTGGCGCTaGCCACGCGCTCATCCCCCG | + |
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Preference number: 4 (lower is better) Translates to: RQGPSLLPESIGREEEVSRLLWR*PRAHPP Trigger: CGGGGGATGAGCGCGTGGCCAGCGCCACAGGAGCCG...AGAGACCTCCTCCTCCCTCCCAATGCTTTCTGGCAAAAGAGAGGGCCCTTGCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS-3UTR CCA 90 bp | CCTGGAGGCAGCAGGGAGATGGGCCAGGCTGAAAGCCTGCTACGATGGTGGGGACCTCACGGAGAATGCTaGCCCCGCTGTTGGCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: PGGSREMGQAESLLRWWGPHGEC*PRCWLW Trigger: CCACAGCCAACAGCGGGGCCAGCATTCTCCGTGAGG...TCCCCACCATCGTAGCAGGCTTTCAGCCTGGCCCATCTCCCTGCTGCCTCCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS-3UTR GCA 90 bp | CCTGGAGGCAGCAGGGAGATGGGCCAGGCTGAAAGCCTGCTACGATGGTGGGGAGACTGGCGGTACCAGTaGACACAGGCCTGCACACTG | + |
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Preference number: 4 (lower is better) Translates to: PGGSREMGQAESLLRWWGDWRYQ*TQACTL Trigger: CAGTGTGCAGGCCTGTGTGCACTGGTACCGCCAGTC...TCCCCACCATCGTAGCAGGCTTTCAGCCTGGCCCATCTCCCTGCTGCCTCCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS-3UTR CCA 90 bp | CTGGAGGCAGCAGGGAGATGGGCCAGGCTGAAAGCCTGCTACGATGGTGGGGACAGCCAGGGGACCTTCTaGCTGCACCACAGTGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: LEAAGRWARLKACYDGGDSQGTF*LHHSEG Trigger: GCCTTCACTGTGGTGCAGCCAGAAGGTCCCCTGGCT...GTCCCCACCATCGTAGCAGGCTTTCAGCCTGGCCCATCTCCCTGCTGCCTCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS-3UTR TCA 90 bp | ACAGCCAGGGGACCTTCTGGCTGCACCACAGTGAAGGCAGGGACACCAGGCTTAGCAGGATCCGTTCGGTaGAGGCACAGGTGGAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: TARGPSGCTTVKAGTPGLAGSVR*RHRWSP Trigger: AGGGCTCCACCTGTGCCTTCACCGAACGGATCCTGC...TAAGCCTGGTGTCCCTGCCTTCACTGTGGTGCAGCCAGAAGGTCCCCTGGCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146498.8 |
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| CDS-3UTR TCA 90 bp | ATGCCAGGCAAGGGCCCTCTCTTTTGCCAGAAAGCATTGGGAGGGAGGAGGAGGGATCCCGGCCTTGGCTaGTCCACAGCAAGGCGTGGG | + |
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Preference number: 4 (lower is better) Translates to: MPGKGPLFCQKALGGRRRDPGLG*STARRG Trigger: CCCACGCCTTGCTGTGGATCAGCCAAGGCCGGGATC...CCTCCTCCTCCCTCCCAATGCTTTCTGGCAAAAGAGAGGGCCCTTGCCTGGCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS-3UTR GCA 90 bp | ACAGCCAGGGGACCTTCTGGCTGCACCACAGTGAAGGCAGGGACACCAGGCTTATCCATAGCCTCCAGCTaGGCCTGGGGGTCACTCCGT | + |
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Preference number: 4 (lower is better) Translates to: TARGPSGCTTVKAGTPGLSIASS*AWGSLR Trigger: ACGGAGTGACCCCCAGGCGCAGCTGGAGGCTATGGA...TAAGCCTGGTGTCCCTGCCTTCACTGTGGTGCAGCCAGAAGGTCCCCTGGCTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146498.8 |
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| CDS-3UTR CCA 90 bp | GTTCCAGCAACACAGTCCCCAAATGCCAGGCAAGGGCCCTCTCTTTTGCCAGAAGCCTCCAGCTGCGCCTaGGGGTCACTCCGTTGGCGC | + |
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Preference number: 4 (lower is better) Translates to: VPATQSPNARQGPSLLPEASSCA*GSLRWR Trigger: GCGCCAACGGAGTGACCCCCAGGCGCAGCTGGAGGC...TTCTGGCAAAAGAGAGGGCCCTTGCCTGGCATTTGGGGACTGTGTTGCTGGAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS-3UTR CCA 90 bp | AGCCTGGAGGCAGCAGGGAGATGGGCCAGGCTGAAAGCCTGCTACGATGGTGGGCAGACCCAGGCTCAATaGCAGTCCAACCTCCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: SLEAAGRWARLKACYDGGQTQAQ*QSNLLQ Trigger: CTGGAGGAGGTTGGACTGCCATTGAGCCTGGGTCTG...CCCACCATCGTAGCAGGCTTTCAGCCTGGCCCATCTCCCTGCTGCCTCCAGGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS-3UTR CCA 90 bp | AGCCTGGAGGCAGCAGGGAGATGGGCCAGGCTGAAAGCCTGCTACGATGGTGGGTCCTGGATGTCTTGGTaGTCCTGCCGCTCCAGCCAA | + |
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Preference number: 4 (lower is better) Translates to: SLEAAGRWARLKACYDGGSWMSW*SCRSSQ Trigger: TTGGCTGGAGCGGCAGGACCACCAAGACATCCAGGA...CCCACCATCGTAGCAGGCTTTCAGCCTGGCCCATCTCCCTGCTGCCTCCAGGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS-3UTR GCA 90 bp | GCTGAAAGCCTGCTACGATGGTGGGGACTCTGGGAAGCACCCTGCTGTCTCTGCCATCCTGATACTCCATaGCCGGCTCCTGTGGCGCTG | + |
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Preference number: 4 (lower is better) Translates to: AESLLRWWGLWEAPCCLCHPDTP*PAPVAL Trigger: CAGCGCCACAGGAGCCGGGCATGGAGTATCAGGATG...GCAGAGACAGCAGGGTGCTTCCCAGAGTCCCCACCATCGTAGCAGGCTTTCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS-3UTR GCA 90 bp | TGGGCCAGGCTGAAAGCCTGCTACGATGGTGGGGACTCTGGGAAGCACCCTGCTTTCAAGTCCTCCACCTaGAGTCCACTCCGTGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: WARLKACYDGGDSGKHPAFKSST*SPLRAR Trigger: CCTGGCACGGAGTGGACTGCAGGTGGAGGACTTGAA...AGCAGGGTGCTTCCCAGAGTCCCCACCATCGTAGCAGGCTTTCAGCCTGGCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS-3UTR GCA 90 bp | CTGAAAGCCTGCTACGATGGTGGGGACTCTGGGAAGCACCCTGCTGTCTCTGCCAGGCCGTTCCAATGCTaGTGGTGTTGGAGGCAGCGG | + |
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Preference number: 4 (lower is better) Translates to: LKACYDGGDSGKHPAVSARPFQC*WCWRQR Trigger: CCGCTGCCTCCAACACCAGCAGCATTGGAACGGCCT...GGCAGAGACAGCAGGGTGCTTCCCAGAGTCCCCACCATCGTAGCAGGCTTTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS-3UTR CCA 90 bp | CTGAAAGCCTGCTACGATGGTGGGGACTCTGGGAAGCACCCTGCTGTCTCTGCCTGGGGGTCACTCCGTTaGCGCTTTACCTGCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LKACYDGGDSGKHPAVSAWGSLR*RFTCSR Trigger: CCTGGAGCAGGTAAAGCGCCAACGGAGTGACCCCCA...GGCAGAGACAGCAGGGTGCTTCCCAGAGTCCCCACCATCGTAGCAGGCTTTCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS-3UTR CCA 90 bp | CAGGATCCAGGCTGCTCAGGCAGCTGCAACAGTAAGCTGGACCTGAGCCTGGAGGCAGCATTAGACCGCTaGTGTGCTCCCTCCAGACCC | + |
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Preference number: 4 (lower is better) Translates to: QDPGCSGSCNSKLDLSLEAALDR*CAPSRP Trigger: GGGTCTGGAGGGAGCACACCAGCGGTCTAATGCTGC...CTCCAGGCTCAGGTCCAGCTTACTGTTGCAGCTGCCTGAGCAGCCTGGATCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS-3UTR CCA 90 bp | TCCAGCAACACAGTCCCCAAATGCCAGGCAAGGGCCCTCTCTTTTGCCAGAAAGTGGCCCAGCAGGGTCTaGGCCGCAGCTGCTCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: SSNTVPKCQARALSFARKWPSRV*AAAAPE Trigger: CTCTGGAGCAGCTGCGGCCCAGACCCTGCTGGGCCA...CTTTCTGGCAAAAGAGAGGGCCCTTGCCTGGCATTTGGGGACTGTGTTGCTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS-3UTR CCA 90 bp | GCCAGGCAAGGGCCCTCTCTTTTGCCAGAAAGCATTGGGAGGGAGGAGGAGGTCATGGGATCCCGGCCTTaGCTGATCCACAGCAAGGCG | + |
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Preference number: 4 (lower is better) Translates to: ARQGPSLLPESIGREEEVMGSRP*LIHSKA Trigger: CGCCTTGCTGTGGATCAGCCAAGGCCGGGATCCCAT...GACCTCCTCCTCCCTCCCAATGCTTTCTGGCAAAAGAGAGGGCCCTTGCCTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS-3UTR TCA 90 bp | TCCCCAAATGCCAGGCAAGGGCCCTCTCTTTTGCCAGAAAGCATTGGGAGGGAGGCAGGATCCGTTCGGTaGAGGCACAGGTGGAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: SPNARQGPSLLPESIGREAGSVR*RHRWSP Trigger: AGGGCTCCACCTGTGCCTTCACCGAACGGATCCTGC...CTCCCTCCCAATGCTTTCTGGCAAAAGAGAGGGCCCTTGCCTGGCATTTGGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS-3UTR GCA 90 bp | CTCAGGCAGGATCCAGGCTGCTCAGGCAGCTGCAACAGTAAGCTGGACCTGAGCATTAGACCGCTGGTGTaGTCCCTCCAGACCCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: LRQDPGCSGSCNSKLDLSIRPLV*SLQTQA Trigger: AGCCTGGGTCTGGAGGGAGCACACCAGCGGTCTAAT...GCTCAGGTCCAGCTTACTGTTGCAGCTGCCTGAGCAGCCTGGATCCTGCCTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS-3UTR GCA 90 bp | TCCAGCAACACAGTCCCCAAATGCCAGGCAAGGGCCCTCTCTTTTGCCAGAAAGGGTGCCAGGGGCAGCTaGCACCGTATGCTTGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: SSNTVPKCQARALSFARKGARGS*HRMLGL Trigger: CAGGCCAAGCATACGGTGGCAGCTGCCCCTGGCACC...CTTTCTGGCAAAAGAGAGGGCCCTTGCCTGGCATTTGGGGACTGTGTTGCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS-3UTR CCA 90 bp | GCTCGATCCCTCAGCACAGCCAGGGGACCTTCTGGCTGCACCACAGTGAAGGCACCTGCTCCAGGTAGCTaGCATTGGTTTGCAGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: ARSLSTARGPSGCTTVKAPAPGS*HWFAGC Trigger: ACACCCTGCAAACCAATGCCAGCTACCTGGAGCAGG...TGCCTTCACTGTGGTGCAGCCAGAAGGTCCCCTGGCTGTGCTGAGGGATCGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146498.8 |
||
| CDS-3UTR CCA 90 bp | AGGCAAGGGCCCTCTCTTTTGCCAGAAAGCATTGGGAGGGAGGAGGAGGTCTCTCGCTCCAGCCAACAGTaGGCCAGCTGCAAGGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: RQGPSLLPESIGREEEVSRSSQQ*ASCKAK Trigger: CTTGGCCTTGCAGCTGGCCCACTGTTGGCTGGAGCG...AGAGACCTCCTCCTCCCTCCCAATGCTTTCTGGCAAAAGAGAGGGCCCTTGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
||
| CDS-3UTR TCA 90 bp | GTTCCAGCAACACAGTCCCCAAATGCCAGGCAAGGGCCCTCTCTTTTGCCAGAACTGGCTGCACCACAGTaGAGGCAGGGACACCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VPATQSPNARQGPSLLPELAAPQ*RQGHQA Trigger: AGCCTGGTGTCCCTGCCTTCACTGTGGTGCAGCCAG...TTCTGGCAAAAGAGAGGGCCCTTGCCTGGCATTTGGGGACTGTGTTGCTGGAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
||
| CDS-3UTR TCA 90 bp | GCTGAAAGCCTGCTACGATGGTGGGGACTCTGGGAAGCACCCTGCTGTCTCTGCTGGCTGTGGGGTGGTTaGGAAGATTCCTTGGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: AESLLRWWGLWEAPCCLCWLWGG*EDSLEG Trigger: GCCTTCCAAGGAATCTTCTCAACCACCCCACAGCCA...GCAGAGACAGCAGGGTGCTTCCCAGAGTCCCCACCATCGTAGCAGGCTTTCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
||
| CDS-3UTR GCA 90 bp | CGAGGTACAGAGAGCCTCTCCCATCCCTACACTCTACCAAGAGCCCAGGACCCTCAGTGCACACAGGCCTaGACACTGCTGGTGGTATGG | + |
|
Preference number: 4 (lower is better) Translates to: RGTESLSHPYTLPRAQDPQCTQA*TLLVVW Trigger: CCATACCACCAGCAGTGTGCAGGCCTGTGTGCACTG...AGGGTCCTGGGCTCTTGGTAGAGTGTAGGGATGGGAGAGGCTCTCTGTACCTCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
||
| CDS-3UTR GCA 90 bp | CGAGGTACAGAGAGCCTCTCCCATCCCTACACTCTACCAAGAGCCCAGGACCCTTCAAACTGGCAGGGCTaGAGCAGCTTCAGCAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RGTESLSHPYTLPRAQDPSNWQG*SSFSRA Trigger: TGCCCTGCTGAAGCTGCTGCAGCCCTGCCAGTTTGA...AGGGTCCTGGGCTCTTGGTAGAGTGTAGGGATGGGAGAGGCTCTCTGTACCTCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
||
| CDS-3UTR GCA 90 bp | AGGCAAGGGCCCTCTCTTTTGCCAGAAAGCATTGGGAGGGAGGAGGAGGTCTCTGCCAGGCCGTTCCAATaGTGCTGGTGTTGGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RQGPSLLPESIGREEEVSARPFQ*CWCWRQ Trigger: CTGCCTCCAACACCAGCAGCATTGGAACGGCCTGGC...AGAGACCTCCTCCTCCCTCCCAATGCTTTCTGGCAAAAGAGAGGGCCCTTGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
||
| CDS-3UTR CCA 90 bp | AGTGAAGGCAGGGACACCAGGCTTAAAGATGCCCCCTTTCTGCCATGCTATTTTGCCTCCAGCTGCGCCTaGGGGTCACTCCGTTGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: SEGRDTRLKDAPFLPCYFASSCA*GSLRWR Trigger: GCGCCAACGGAGTGACCCCCAGGCGCAGCTGGAGGC...AAAATAGCATGGCAGAAAGGGGGCATCTTTAAGCCTGGTGTCCCTGCCTTCACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000146498.8 |
||
| CDS-3UTR CCA 90 bp | AGGCAAGGGCCCTCTCTTTTGCCAGAAAGCATTGGGAGGGAGGAGGAGGTCTCTGTAAGGGGTCCCCGCTaGAGTATCTGTGTCCGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RQGPSLLPESIGREEEVSVRGPR*SICVRP Trigger: TGGCCGGACACAGATACTCCAGCGGGGACCCCTTAC...AGAGACCTCCTCCTCCCTCCCAATGCTTTCTGGCAAAAGAGAGGGCCCTTGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
||
| CDS-3UTR CCA 90 bp | GCTGAAAGCCTGCTACGATGGTGGGGACTCTGGGAAGCACCCTGCTGTCTCTGCCCTGTAACCAGTACATaGATGGCAGCAGCCTCACGG | + |
|
Preference number: 4 (lower is better) Translates to: AESLLRWWGLWEAPCCLCPVTST*MAAASR Trigger: CCGTGAGGCTGCTGCCATCCATGTACTGGTTACAGG...GCAGAGACAGCAGGGTGCTTCCCAGAGTCCCCACCATCGTAGCAGGCTTTCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
||
| CDS-3UTR CCA 90 bp | CAGGGCTTCCAATGGCGGACACAGGTACAACGGGCATCCAATCTGCTGGGCTCGGGTCCTTCCACTCCATaGCTGCTTCCCACCAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: QGFQWRTQVQRASNLLGSGPSTP*LLPTRT Trigger: AGTTCTGGTGGGAAGCAGCCATGGAGTGGAAGGACC...CGAGCCCAGCAGATTGGATGCCCGTTGTACCTGTGTCCGCCATTGGAAGCCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146498.8 |
||
| CDS-3UTR TCA 90 bp | CCCAAATGCCAGGCAAGGGCCCTCTCTTTTGCCAGAAAGCATTGGGAGGGAGGACGCACCTGCACCATGTaGGGAGAGCTAAAGAAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: PKCQARALSFARKHWEGGRTCTM*GELKKP Trigger: CGGCTTCTTTAGCTCTCCTCACATGGTGCAGGTGCG...TCCTCCCTCCCAATGCTTTCTGGCAAAAGAGAGGGCCCTTGCCTGGCATTTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
||
| CDS-3UTR TCA 90 bp | GTACAGAGAGCCTCTCCCATCCCTACACTCTACCAAGAGCCCAGGACCCTGGGCGGTCCAGAGTCACAGTaGAGTTCTGCTGGTCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VQRASPIPTLYQEPRTLGGPESQ*SSAGLH Trigger: ATGCAGACCAGCAGAACTTCACTGTGACTCTGGACC...GCCCAGGGTCCTGGGCTCTTGGTAGAGTGTAGGGATGGGAGAGGCTCTCTGTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
||
| CDS-3UTR GCA 90 bp | CTCAGGCAGGATCCAGGCTGCTCAGGCAGCTGCAACAGTAAGCTGGACCTGAGCGACTGGTGTGGTCAATaGCAAGAGAGGAGACTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LRQDPGCSGSCNSKLDLSDWCGQ*QERRLH Trigger: GTGGAGTCTCCTCTCTTGGCATTGACCACACCAGTC...GCTCAGGTCCAGCTTACTGTTGCAGCTGCCTGAGCAGCCTGGATCCTGCCTGAG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
||
| CDS-3UTR GCA 90 bp | CTTCAATTAGTTCCAGCAACACAGTCCCCAAATGCCAGGCAAGGGCCCTCTCTTGGTCTGGGCCGCAGCTaGTCCAGAGGTTGGAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LQLVPATQSPNARQGPSLGLGRS*SRGWSW Trigger: CCAGCTCCAACCTCTGGAGCAGCTGCGGCCCAGACC...AAGAGAGGGCCCTTGCCTGGCATTTGGGGACTGTGTTGCTGGAACTAATTGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
||
| CDS-3UTR GCA 90 bp | CAGGGCTTCCAATGGCGGACACAGGTACAACGGGCATCCAATCTGCTGGGCTCGCTTCCACTCCATGGCTaGTTCCCACCAGAACTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QGFQWRTQVQRASNLLGSLPLHG*FPPELL Trigger: GAGAAGTTCTGGTGGGAAGCAGCCATGGAGTGGAAG...CGAGCCCAGCAGATTGGATGCCCGTTGTACCTGTGTCCGCCATTGGAAGCCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146498.8 |
||
| CDS-3UTR CCA 90 bp | CCTGGAGGCAGCAGGGAGATGGGCCAGGCTGAAAGCCTGCTACGATGGTGGGGAGACTCCACACACCACTaGCTTTCTGATGATGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PGGSREMGQAESLLRWWGDSTHH*LSDDVG Trigger: ACCAACATCATCAGAAAGCCAGTGGTGTGTGGAGTC...TCCCCACCATCGTAGCAGGCTTTCAGCCTGGCCCATCTCCCTGCTGCCTCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
||
| CDS-3UTR TCA 90 bp | CAGCACAGCCAGGGGACCTTCTGGCTGCACCACAGTGAAGGCAGGGACACCAGGTTGGTCCCAGTGACATaGATAATGTTTAGCCGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: QHSQGTFWLHHSEGRDTRLVPVT*IMFSRF Trigger: GAACCGGCTAAACATTATTCATGTCACTGGGACCAA...CCTGGTGTCCCTGCCTTCACTGTGGTGCAGCCAGAAGGTCCCCTGGCTGTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146498.8 |
||
| CDS-3UTR CCA 90 bp | GAGGAAGGAGAGGCCGAGGTACAGAGAGCCTCTCCCATCCCTACACTCTACCAACCTGCTCCAGGTAGCTaGCATTGGTTTGCAGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: EEGEAEVQRASPIPTLYQPAPGS*HWFAGC Trigger: ACACCCTGCAAACCAATGCCAGCTACCTGGAGCAGG...TTGGTAGAGTGTAGGGATGGGAGAGGCTCTCTGTACCTCGGCCTCTCCTTCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
||
| CDS-3UTR CCA 90 bp | TCCAGCAACACAGTCCCCAAATGCCAGGCAAGGGCCCTCTCTTTTGCCAGAAAGGGGCATCCAATCTGCTaGGCTCGATCCCTCAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: SSNTVPKCQARALSFARKGHPIC*ARSLST Trigger: TGTGCTGAGGGATCGAGCCCAGCAGATTGGATGCCC...CTTTCTGGCAAAAGAGAGGGCCCTTGCCTGGCATTTGGGGACTGTGTTGCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
||
| CDS-3UTR CCA 90 bp | CAGGATCCAGGCTGCTCAGGCAGCTGCAACAGTAAGCTGGACCTGAGCCTGGAGAAACCTCTGTCACGTTaGGGCAGAAGACAGCGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: QDPGCSGSCNSKLDLSLEKPLSR*GRRQRS Trigger: ACTACGCTGTCTTCTGCCCCAACGTGACAGAGGTTT...CTCCAGGCTCAGGTCCAGCTTACTGTTGCAGCTGCCTGAGCAGCCTGGATCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
||
| CDS-3UTR CCA 90 bp | CCCAAATGCCAGGCAAGGGCCCTCTCTTTTGCCAGAAAGCATTGGGAGGGAGGAAGCTGCTCCAGAGGTTaGAGCTGGCCTGTTTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PKCQARALSFARKHWEGGSCSRG*SWPVSQ Trigger: CTGAGAAACAGGCCAGCTCCAACCTCTGGAGCAGCT...TCCTCCCTCCCAATGCTTTCTGGCAAAAGAGAGGGCCCTTGCCTGGCATTTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
||
| CDS-3UTR GCA 90 bp | AAAGCTTCAATTAGTTCCAGCAACACAGTCCCCAAATGCCAGGCAAGGGCCCTCAGGGGACCTTCTGGCTaGACCACAGTGAAGGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KASISSSNTVPKCQARALRGPSG*TTVKAG Trigger: CCCTGCCTTCACTGTGGTGCAGCCAGAAGGTCCCCT...GAGGGCCCTTGCCTGGCATTTGGGGACTGTGTTGCTGGAACTAATTGAAGCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
||
| CDS-3UTR CCA 90 bp | GAGGAAGGAGAGGCCGAGGTACAGAGAGCCTCTCCCATCCCTACACTCTACCAAAGGTCCACCTTCTCTTaGAGGAAGACATGGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: EEGEAEVQRASPIPTLYQRSTFS*RKTWKA Trigger: GGCCTTCCATGTCTTCCTCCAAGAGAAGGTGGACCT...TTGGTAGAGTGTAGGGATGGGAGAGGCTCTCTGTACCTCGGCCTCTCCTTCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
||
| CDS-3UTR CCA 90 bp | ATGCCAGGCAAGGGCCCTCTCTTTTGCCAGAAAGCATTGGGAGGGAGGAGGAGGCCTAGTAGACTGGTGTaGTCAATGCCAAGAGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: MPGKGPLFCQKALGGRRRPSRLV*SMPREE Trigger: CTCCTCTCTTGGCATTGACCACACCAGTCTACTAGG...CCTCCTCCTCCCTCCCAATGCTTTCTGGCAAAAGAGAGGGCCCTTGCCTGGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
||
| CDS-3UTR TCA 90 bp | CAGGATCCAGGCTGCTCAGGCAGCTGCAACAGTAAGCTGGACCTGAGCCTGGAGTTGGTCCCAGTGACATaGATAATGTTTAGCCGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: QDPGCSGSCNSKLDLSLELVPVT*IMFSRF Trigger: GAACCGGCTAAACATTATTCATGTCACTGGGACCAA...CTCCAGGCTCAGGTCCAGCTTACTGTTGCAGCTGCCTGAGCAGCCTGGATCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
||
| CDS-3UTR GCA 90 bp | AAAGCTTCAATTAGTTCCAGCAACACAGTCCCCAAATGCCAGGCAAGGGCCCTCATGTCTTGGTGGTCCTaGCGCTCCAGCCAACAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KASISSSNTVPKCQARALMSWWS*RSSQQW Trigger: CCACTGTTGGCTGGAGCGGCAGGACCACCAAGACAT...GAGGGCCCTTGCCTGGCATTTGGGGACTGTGTTGCTGGAACTAATTGAAGCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
||
| CDS-3UTR CCA 90 bp | GTTCCAGCAACACAGTCCCCAAATGCCAGGCAAGGGCCCTCTCTTTTGCCAGAAGATACCTTCAGCTCCTaGATGTCTTGGTGGTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VPATQSPNARQGPSLLPEDTFSS*MSWWSC Trigger: GCAGGACCACCAAGACATCCAGGAGCTGAAGGTATC...TTCTGGCAAAAGAGAGGGCCCTTGCCTGGCATTTGGGGACTGTGTTGCTGGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
||
| CDS-3UTR CCA 90 bp | AAAGCTTCAATTAGTTCCAGCAACACAGTCCCCAAATGCCAGGCAAGGGCCCTCCAGCGGAGCAGCACCTaGTCCAGAGTCACAGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KASISSSNTVPKCQARALQRSST*SRVTVK Trigger: CTTCACTGTGACTCTGGACCAGGTGCTGCTCCGCTG...GAGGGCCCTTGCCTGGCATTTGGGGACTGTGTTGCTGGAACTAATTGAAGCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
||
| CDS-3UTR CCA 90 bp | CTTCAATTAGTTCCAGCAACACAGTCCCCAAATGCCAGGCAAGGGCCCTCTCTTTCCAGAGGTTGGAGCTaGCCTGTTTCTCAGCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LQLVPATQSPNARQGPSLSRGWS*PVSQPG Trigger: GCCTGGCTGAGAAACAGGCCAGCTCCAACCTCTGGA...AAGAGAGGGCCCTTGCCTGGCATTTGGGGACTGTGTTGCTGGAACTAATTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
||
| CDS-3UTR CCA 90 bp | CGAGGTACAGAGAGCCTCTCCCATCCCTACACTCTACCAAGAGCCCAGGACCCTGTTGAGAAGATTCCTTaGAAGGCTCTGGGGCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: RGTESLSHPYTLPRAQDPVEKIP*KALGLK Trigger: TTTCAGCCCCAGAGCCTTCCAAGGAATCTTCTCAAC...AGGGTCCTGGGCTCTTGGTAGAGTGTAGGGATGGGAGAGGCTCTCTGTACCTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
||
| CDS-3UTR GCA 90 bp | CACAGTGAAGGCAGGGACACCAGGCTTAAAGATGCCCCCTTTCTGCCATGCTATGACTGGTGTGGTCAATaGCAAGAGAGGAGACTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: HSEGRDTRLKDAPFLPCYDWCGQ*QERRLH Trigger: GTGGAGTCTCCTCTCTTGGCATTGACCACACCAGTC...ATAGCATGGCAGAAAGGGGGCATCTTTAAGCCTGGTGTCCCTGCCTTCACTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146498.8 |
||
| CDS-3UTR GCA 90 bp | GAGGAAGGAGAGGCCGAGGTACAGAGAGCCTCTCCCATCCCTACACTCTACCAAGCCCCCTTTCTGCCATaGTATTTTCTCCACTGTATC | + |
|
Preference number: 4 (lower is better) Translates to: EEGEAEVQRASPIPTLYQAPFLP*YFLHCI Trigger: GATACAGTGGAGAAAATAGCATGGCAGAAAGGGGGC...TTGGTAGAGTGTAGGGATGGGAGAGGCTCTCTGTACCTCGGCCTCTCCTTCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
||
| CDS-3UTR CCA 90 bp | AGGGGACCTTCTGGCTGCACCACAGTGAAGGCAGGGACACCAGGCTTAAAGATGGACTCCACACACCACTaGCTTTCTGATGATGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RGPSGCTTVKAGTPGLKMDSTHH*LSDDVG Trigger: ACCAACATCATCAGAAAGCCAGTGGTGTGTGGAGTC...CATCTTTAAGCCTGGTGTCCCTGCCTTCACTGTGGTGCAGCCAGAAGGTCCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146498.8 |
||
| CDS-3UTR CCA 90 bp | GTTCCAGCAACACAGTCCCCAAATGCCAGGCAAGGGCCCTCTCTTTTGCCAGAACTGTTGGCTGTGGGGTaGTTGAGAAGATTCCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VPATQSPNARQGPSLLPELLAVG*LRRFLG Trigger: TCCAAGGAATCTTCTCAACCACCCCACAGCCAACAG...TTCTGGCAAAAGAGAGGGCCCTTGCCTGGCATTTGGGGACTGTGTTGCTGGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
||
| CDS-3UTR GCA 90 bp | AATGCCAGGCAAGGGCCCTCTCTTTTGCCAGAAAGCATTGGGAGGGAGGAGGAGAAGATGCCCCCTTTCTaGCATGCTATTTTCTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: NARQGPSLLPESIGREEEKMPPF*HAIFST Trigger: AGTGGAGAAAATAGCATGGCAGAAAGGGGGCATCTT...CTCCTCCTCCCTCCCAATGCTTTCTGGCAAAAGAGAGGGCCCTTGCCTGGCATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
||
| CDS-3UTR GCA 90 bp | TCCCCAAATGCCAGGCAAGGGCCCTCTCTTTTGCCAGAAAGCATTGGGAGGGAGGTCACAGTGAAGTTCTaGTGGTCTGCATTTCCTATG | + |
|
Preference number: 4 (lower is better) Translates to: SPNARQGPSLLPESIGREVTVKF*WSAFPM Trigger: CATAGGAAATGCAGACCAGCAGAACTTCACTGTGAC...CTCCCTCCCAATGCTTTCTGGCAAAAGAGAGGGCCCTTGCCTGGCATTTGGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
||
| CDS-3UTR CCA 90 bp | AAAGCTTCAATTAGTTCCAGCAACACAGTCCCCAAATGCCAGGCAAGGGCCCTCATCCACAGCAAGGCGTaGGAGATGCAGCTGAAAACG | + |
|
Preference number: 4 (lower is better) Translates to: KASISSSNTVPKCQARALIHSKA*EMQLKT Trigger: CGTTTTCAGCTGCATCTCCCACGCCTTGCTGTGGAT...GAGGGCCCTTGCCTGGCATTTGGGGACTGTGTTGCTGGAACTAATTGAAGCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
||
| CDS-3UTR GCA 90 bp | TCTGAGAGCAGAAATCACAAGGCACTGAGTATAAGAGTCTGTGGAAAGGCAGACACGCGCAGAAACAGCTaGCAGGGACAGAGTCGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SESRNHKALSIRVCGKADTRRNS*QGQSRA Trigger: TGCTCGACTCTGTCCCTGGCAGCTGTTTCTGCGCGT...GTCTGCCTTTCCACAGACTCTTATACTCAGTGCCTTGTGATTTCTGCTCTCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
||
| CDS-3UTR CCA 90 bp | GGGACACCAGGCTTAAAGATGCCCCCTTTCTGCCATGCTATTTTCTCCACTGTAAGGTCCACCTTCTCTTaGAGGAAGACATGGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GTPGLKMPPFCHAIFSTVRSTFS*RKTWKA Trigger: GGCCTTCCATGTCTTCCTCCAAGAGAAGGTGGACCT...TACAGTGGAGAAAATAGCATGGCAGAAAGGGGGCATCTTTAAGCCTGGTGTCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146498.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGAAGGAGAGGCCGAGGTACAGAGAGCCTCTCCCATCCCTACACTCTACCAACAGTGAAGTTCTGCTaGTCTGCATTTCCTATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RGRRGRGTESLSHPYTLPTVKFC*SAFPMD Trigger: ATCCATAGGAAATGCAGACCAGCAGAACTTCACTGT...TGGTAGAGTGTAGGGATGGGAGAGGCTCTCTGTACCTCGGCCTCTCCTTCCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
||
| CDS CCA 90 bp | CGTGCGCACAGCATCCTGATACTCCATGCCCGGCTCCTGTGGCGCTaGCCACGCGCTCATCCCCCGCCGCGCCGCGCCCTCCGTCGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: RAHSILILHARLLWR*PRAHPPPRRALRRC Trigger: GCAACGACGGAGGGCGCGGCGCGGCGGGGGATGAGCGCGTGGCCAGCGCCACAGGAGCCGGGCATGGAGTATCAGGATGCTGTGCGCACG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
||
| CDS CCA 90 bp | GTTGAGCGTGCGCACAGCATCCTGATACTCCATGCCCGGCTCCTGTaGCGCTGGCCACGCGCTCATCCCCCGCCGCGCCGCGCCCTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: VERAHSILILHARLL*RWPRAHPPPRRALR Trigger: ACGGAGGGCGCGGCGCGGCGGGGGATGAGCGCGTGGCCAGCGCCACAGGAGCCGGGCATGGAGTATCAGGATGCTGTGCGCACGCTCAAC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
||
| CDS TCA 90 bp | TGTGTCCGGCCAGGCCACACTGTGTCCCGAAGCCCACGCCTCATGTaGGGGGTAGGGCGGAACACAGGTGCCAGGGGCAGCTGCCACCGT | + |
|
Preference number: 5 (lower is better) Translates to: CVRPGHTVSRSPRLM*GVGRNTGARGSCHR Trigger: ACGGTGGCAGCTGCCCCTGGCACCTGTGTTCCGCCCTACCCCTCACATGAGGCGTGGGCTTCGGGACACAGTGTGGCCTGGCCGGACACA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
||
| CDS GCA 90 bp | GTCCCGAAGCCCACGCCTCATGTGAGGGGTAGGGCGGAACACAGGTaGCAGGGGCAGCTGCCACCGTATGCTTGGCCTGGATACCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: VPKPTPHVRGRAEHR*QGQLPPYAWPGYLQ Trigger: CTGAAGGTATCCAGGCCAAGCATACGGTGGCAGCTGCCCCTGGCACCTGTGTTCCGCCCTACCCCTCACATGAGGCGTGGGCTTCGGGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
||
| CDS CCA 90 bp | CTGGTGGTATGGGCGCCATCCAGGTACCAGGTAAGGGGTCCCCGCTaGAGTATCTGTGTCCGGCCAGGCCACACTGTGTCCCGAAGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LVVWAPSRYQVRGPR*SICVRPGHTVSRSP Trigger: TGGGCTTCGGGACACAGTGTGGCCTGGCCGGACACAGATACTCCAGCGGGGACCCCTTACCTGGTACCTGGATGGCGCCCATACCACCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS CCA 90 bp | GGTAGGGCGGAACACAGGTGCCAGGGGCAGCTGCCACCGTATGCTTaGCCTGGATACCTTCAGCTCCTGGATGTCTTGGTGGTCCTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: GRAEHRCQGQLPPYA*PGYLQLLDVLVVLP Trigger: CGGCAGGACCACCAAGACATCCAGGAGCTGAAGGTATCCAGGCCAAGCATACGGTGGCAGCTGCCCCTGGCACCTGTGTTCCGCCCTACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS GCA 90 bp | TCCAGGGCTTCCAATGGCGGACACAGGTACAACGGGCATCCAATCTaGTGGGCTCGATCCCTCAGCACAGCCAGGGGACCTTCTGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SRASNGGHRYNGHPI*WARSLSTARGPSGC Trigger: GCAGCCAGAAGGTCCCCTGGCTGTGCTGAGGGATCGAGCCCAGCAGATTGGATGCCCGTTGTACCTGTGTCCGCCATTGGAAGCCCTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS GCA 90 bp | ACAGTGGGCCAGCTGCAAGGCCAAGGCAGCATTAGACCGCTGGTGTaGTCCCTCCAGACCCAGGCTCAATGGCAGTCCAACCTCCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: TVGQLQGQGSIRPLV*SLQTQAQWQSNLLQ Trigger: CTGGAGGAGGTTGGACTGCCATTGAGCCTGGGTCTGGAGGGAGCACACCAGCGGTCTAATGCTGCCTTGGCCTTGCAGCTGGCCCACTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS GCA 90 bp | TGGATGTCTTGGTGGTCCTGCCGCTCCAGCCAACAGTGGGCCAGCTaGAAGGCCAAGGCAGCATTAGACCGCTGGTGTGCTCCCTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: WMSWWSCRSSQQWAS*KAKAALDRWCAPSR Trigger: TCTGGAGGGAGCACACCAGCGGTCTAATGCTGCCTTGGCCTTGCAGCTGGCCCACTGTTGGCTGGAGCGGCAGGACCACCAAGACATCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS GCA 90 bp | CTCCAGAGGTTGGAGCTGGCCTGTTTCTCAGCCAGGCCGTTCCAATaGTGCTGGTGTTGGAGGCAGCGGAGCAGCACCTGGTCCAGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LQRLELACFSARPFQ*CWCWRQRSSTWSRV Trigger: GACTCTGGACCAGGTGCTGCTCCGCTGCCTCCAACACCAGCAGCATTGGAACGGCCTGGCTGAGAAACAGGCCAGCTCCAACCTCTGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS CCA 90 bp | AGCCAACAGTGGGCCAGCTGCAAGGCCAAGGCAGCATTAGACCGCTaGTGTGCTCCCTCCAGACCCAGGCTCAATGGCAGTCCAACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SQQWASCKAKAALDR*CAPSRPRLNGSPTS Trigger: GGAGGTTGGACTGCCATTGAGCCTGGGTCTGGAGGGAGCACACCAGCGGTCTAATGCTGCCTTGGCCTTGCAGCTGGCCCACTGTTGGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS CCA 90 bp | TGCCACCGTATGCTTGGCCTGGATACCTTCAGCTCCTGGATGTCTTaGTGGTCCTGCCGCTCCAGCCAACAGTGGGCCAGCTGCAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: CHRMLGLDTFSSWMS*WSCRSSQQWASCKA Trigger: GGCCTTGCAGCTGGCCCACTGTTGGCTGGAGCGGCAGGACCACCAAGACATCCAGGAGCTGAAGGTATCCAGGCCAAGCATACGGTGGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS CCA 90 bp | GGCAGCATTAGACCGCTGGTGTGCTCCCTCCAGACCCAGGCTCAATaGCAGTCCAACCTCCTCCAGGGCTTCCAATGGCGGACACAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: GSIRPLVCSLQTQAQ*QSNLLQGFQWRTQV Trigger: TACCTGTGTCCGCCATTGGAAGCCCTGGAGGAGGTTGGACTGCCATTGAGCCTGGGTCTGGAGGGAGCACACCAGCGGTCTAATGCTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS CCA 90 bp | TTCAGCTCCTGGATGTCTTGGTGGTCCTGCCGCTCCAGCCAACAGTaGGCCAGCTGCAAGGCCAAGGCAGCATTAGACCGCTGGTGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: FSSWMSWWSCRSSQQ*ASCKAKAALDRWCA Trigger: AGCACACCAGCGGTCTAATGCTGCCTTGGCCTTGCAGCTGGCCCACTGTTGGCTGGAGCGGCAGGACCACCAAGACATCCAGGAGCTGAA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS CCA 90 bp | CACCGTATGCTTGGCCTGGATACCTTCAGCTCCTGGATGTCTTGGTaGTCCTGCCGCTCCAGCCAACAGTGGGCCAGCTGCAAGGCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: HRMLGLDTFSSWMSW*SCRSSQQWASCKAK Trigger: CTTGGCCTTGCAGCTGGCCCACTGTTGGCTGGAGCGGCAGGACCACCAAGACATCCAGGAGCTGAAGGTATCCAGGCCAAGCATACGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS TCA 90 bp | GGCGCTTTACCTGCTCCAGGTAGCTGGCATTGGTTTGCAGGGTGTTaGGCGTGCGCACAGCATCCTGATACTCCATGCCCGGCTCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: GALPAPGSWHWFAGC*ACAQHPDTPCPAPV Trigger: CACAGGAGCCGGGCATGGAGTATCAGGATGCTGTGCGCACGCTCAACACCCTGCAAACCAATGCCAGCTACCTGGAGCAGGTAAAGCGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS TCA 90 bp | GATGTGTACTTCGGACCCTCCATCGGTGCGTTTGCTGCGCTCCAATaGCTGGCGGTACCAGTGCACACAGGCCTGCACACTGCTGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: DVYFGPSIGAFAALQ*LAVPVHTGLHTAGG Trigger: ACCACCAGCAGTGTGCAGGCCTGTGTGCACTGGTACCGCCAGTCATTGGAGCGCAGCAAACGCACCGATGGAGGGTCCGAAGTACACATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS CCA 90 bp | CAGACCCAGGCTCAATGGCAGTCCAACCTCCTCCAGGGCTTCCAATaGCGGACACAGGTACAACGGGCATCCAATCTGCTGGGCTCGATC | + |
|
Preference number: 5 (lower is better) Translates to: QTQAQWQSNLLQGFQ*RTQVQRASNLLGSI Trigger: GATCGAGCCCAGCAGATTGGATGCCCGTTGTACCTGTGTCCGCCATTGGAAGCCCTGGAGGAGGTTGGACTGCCATTGAGCCTGGGTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS CCA 90 bp | TGTACTTCGGACCCTCCATCGGTGCGTTTGCTGCGCTCCAATGACTaGCGGTACCAGTGCACACAGGCCTGCACACTGCTGGTGGTATGG | + |
|
Preference number: 5 (lower is better) Translates to: CTSDPPSVRLLRSND*RYQCTQACTLLVVW Trigger: CCATACCACCAGCAGTGTGCAGGCCTGTGTGCACTGGTACCGCCAGTCATTGGAGCGCAGCAAACGCACCGATGGAGGGTCCGAAGTACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS-3UTR CAA 90 bp | GAAGGAGAGGCCGAGGTACAGAGAGCCTCTCCCATCCCTACACTCTACCAAGAGCTGGGGGTCACTCCGTaGGCGCTTTACCTGCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: EGEAEVQRASPIPTLYQELGVTP*ALYLLQ Trigger: CTGGAGCAGGTAAAGCGCCAACGGAGTGACCCCCAG...CTCTTGGTAGAGTGTAGGGATGGGAGAGGCTCTCTGTACCTCGGCCTCTCCTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS-3UTR CAA 90 bp | TCCCCAAATGCCAGGCAAGGGCCCTCTCTTTTGCCAGAAAGCATTGGGAGGGAGGATGGGATCCCGGCCTaGGCTGATCCACAGCAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SPNARQGPSLLPESIGREDGIPA*ADPQQG Trigger: GCCTTGCTGTGGATCAGCCAAGGCCGGGATCCCATC...CTCCCTCCCAATGCTTTCTGGCAAAAGAGAGGGCCCTTGCCTGGCATTTGGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS TCA 90 bp | TTGGCTGTGGGGTGGTTGAGAAGATTCCTTGGAAGGCTCTGGGGCTaGAAGATGGGATCCCGGCCTTGGCTGATCCACAGCAAGGCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LAVGWLRRFLGRLWG*KMGSRPWLIHSKAW Trigger: CCACGCCTTGCTGTGGATCAGCCAAGGCCGGGATCCCATCTTTCAGCCCCAGAGCCTTCCAAGGAATCTTCTCAACCACCCCACAGCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS GCA 90 bp | TGGGACATAGAGGGATCCAGCAGTTTCAGAACCCCGCCCACCAGGTaGAGGCTTCCTGTAACCAGTACATGGATGGCAGCAGCCTCACGG | + |
|
Preference number: 5 (lower is better) Translates to: WDIEGSSSFRTPPTR*RLPVTSTWMAAASR Trigger: CCGTGAGGCTGCTGCCATCCATGTACTGGTTACAGGAAGCCTGCACCTGGTGGGCGGGGTTCTGAAACTGCTGGATCCCTCTATGTCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS-3UTR CAA 90 bp | GTGAAGGCAGGGACACCAGGCTTAAAGATGCCCCCTTTCTGCCATGCTATTTTCCTGGGGGTCACTCCGTaGGCGCTTTACCTGCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VKAGTPGLKMPPFCHAIFLGVTP*ALYLLQ Trigger: CTGGAGCAGGTAAAGCGCCAACGGAGTGACCCCCAG...GAAAATAGCATGGCAGAAAGGGGGCATCTTTAAGCCTGGTGTCCCTGCCTTCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000146498.8 |
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| CDS CCA 90 bp | GTTATAGAGGCACCAGAAGTGCTTGGTGAAGAGCTCGGGGCTGATTaGTTTCCCGTTGATTCGAATCCGCTCCCGCACCTGCACCATGTG | + |
|
Preference number: 5 (lower is better) Translates to: VIEAPEVLGEELGAD*FPVDSNPLPHLHHV Trigger: CACATGGTGCAGGTGCGGGAGCGGATTCGAATCAACGGGAAACCAATCAGCCCCGAGCTCTTCACCAAGCACTTCTGGTGCCTCTATAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028148.11 ENSMUST00000127812.3 |
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| CDS CCA 90 bp | AGGCAGCGGAGCAGCACCTGGTCCAGAGTCACAGTGAAGTTCTGCTaGTCTGCATTTCCTATGGATGAAACCTCTGTCACGTTGGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RQRSSTWSRVTVKFC*SAFPMDETSVTLGQ Trigger: CTGCCCCAACGTGACAGAGGTTTCATCCATAGGAAATGCAGACCAGCAGAACTTCACTGTGACTCTGGACCAGGTGCTGCTCCGCTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS-3UTR CAA 90 bp | GAAGGAGAGGCCGAGGTACAGAGAGCCTCTCCCATCCCTACACTCTACCAAGAGGGCTTTCTGATGATGTaGGTGCAGTCAAAAGCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: EGEAEVQRASPIPTLYQEGFLMM*VQSKAP Trigger: CGGGGCTTTTGACTGCACCAACATCATCAGAAAGCC...CTCTTGGTAGAGTGTAGGGATGGGAGAGGCTCTCTGTACCTCGGCCTCTCCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS TCA 90 bp | GCTGGTGTTGGAGGCAGCGGAGCAGCACCTGGTCCAGAGTCACAGTaGAGTTCTGCTGGTCTGCATTTCCTATGGATGAAACCTCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: AGVGGSGAAPGPESQ*SSAGLHFLWMKPLS Trigger: TGACAGAGGTTTCATCCATAGGAAATGCAGACCAGCAGAACTTCACTGTGACTCTGGACCAGGTGCTGCTCCGCTGCCTCCAACACCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS TCA 90 bp | CACAGCATCCTGAAAGGAGGCAGTCTTAGCTTCGTAAGCACTCCCTaGTGGGTCCTTCCACTCCATGGCTGCTTCCCACCAGAACTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: HSILKGGSLSFVSTP*WVLPLHGCFPPELL Trigger: GAGAAGTTCTGGTGGGAAGCAGCCATGGAGTGGAAGGACCCATCAGGGAGTGCTTACGAAGCTAAGACTGCCTCCTTTCAGGATGCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000127812.3 ENSMUST00000143743.2 ENSMUST00000146498.8 |
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| CDS-3UTR CAA 90 bp | ACAGTCCCCAAATGCCAGGCAAGGGCCCTCTCTTTTGCCAGAAAGCATTGGGAGTTGGCTGTGGGGTGGTaGAGAAGATTCCTTGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: TVPKCQARALSFARKHWELAVGW*RRFLGR Trigger: CCTTCCAAGGAATCTTCTCAACCACCCCACAGCCAA...CTCCCAATGCTTTCTGGCAAAAGAGAGGGCCCTTGCCTGGCATTTGGGGACTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS CCA 90 bp | AGTTCTGCTGGTCTGCATTTCCTATGGATGAAACCTCTGTCACGTTaGGGCAGAAGACAGCGTAGTCAAACTGGCAGGGCTGCAGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SSAGLHFLWMKPLSR*GRRQRSQTGRAAAA Trigger: AGCTGCTGCAGCCCTGCCAGTTTGACTACGCTGTCTTCTGCCCCAACGTGACAGAGGTTTCATCCATAGGAAATGCAGACCAGCAGAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS-3UTR CAA 90 bp | TCTGAGAGCAGAAATCACAAGGCACTGAGTATAAGAGTCTGTGGAAAGGCAGACAGGCACCAGAAGTGCTaGGTGAAGAGCTCGGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SESRNHKALSIRVCGKADRHQKC*VKSSGL Trigger: CAGCCCCGAGCTCTTCACCAAGCACTTCTGGTGCCT...GTCTGCCTTTCCACAGACTCTTATACTCAGTGCCTTGTGATTTCTGCTCTCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS GCA 90 bp | ACCACAGTGAAGGCAGGGACACCAGGCTTAAAGATGCCCCCTTTCTaGCATGCTATTTTCTCCACTGTATCTCCTAGTAGACTGGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: TTVKAGTPGLKMPPF*HAIFSTVSPSRLVW Trigger: CCACACCAGTCTACTAGGAGATACAGTGGAGAAAATAGCATGGCAGAAAGGGGGCATCTTTAAGCCTGGTGTCCCTGCCTTCACTGTGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS-3UTR CAA 90 bp | ACACCAGGCTTAAAGATGCCCCCTTTCTGCCATGCTATTTTCTCCACTGTATCTGGCTTTCTGATGATGTaGGTGCAGTCAAAAGCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: TPGLKMPPFCHAIFSTVSGFLMM*VQSKAP Trigger: CGGGGCTTTTGACTGCACCAACATCATCAGAAAGCC...AGATACAGTGGAGAAAATAGCATGGCAGAAAGGGGGCATCTTTAAGCCTGGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000146498.8 |
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| CDS CCA 72 bp | AGCATCCTGATACTCCATGCCCGGCTCCTGTGGCGCTaGCCACGCGCTCATCCCCCGCCGCGCCGCGCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: SILILHARLLWR*PRAHPPPRRAL Trigger: GAGGGCGCGGCGCGGCGGGGGATGAGCGCGTGGCCAGCGCCACAGGAGCCGGGCATGGAGTATCAGGATGCT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS CCA 72 bp | GCGCACAGCATCCTGATACTCCATGCCCGGCTCCTGTaGCGCTGGCCACGCGCTCATCCCCCGCCGCGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: AHSILILHARLL*RWPRAHPPPRR Trigger: GCGGCGCGGCGGGGGATGAGCGCGTGGCCAGCGCCACAGGAGCCGGGCATGGAGTATCAGGATGCTGTGCGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS GCA 72 bp | CGCGCTCATCCCCCGCCGCGCCGCGCCCTCCGTCGTTaGACCACGCGCAGAAACAGCTGCCAGGGACAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: RAHPPPRRALRR*TTRRNSCQGQS Trigger: ACTCTGTCCCTGGCAGCTGTTTCTGCGCGTGGTGCAACGACGGAGGGCGCGGCGCGGCGGGGGATGAGCGCG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS CAA 72 bp | ACGCGCTCATCCCCCGCCGCGCCGCGCCCTCCGTCGTaGCACCACGCGCAGAAACAGCTGCCAGGGACAGAG | + |
|
Preference number: 6 (lower is better) Translates to: TRSSPAAPRPPS*HHAQKQLPGTE Trigger: CTCTGTCCCTGGCAGCTGTTTCTGCGCGTGGTGCAACGACGGAGGGCGCGGCGCGGCGGGGGATGAGCGCGT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS GCA 72 bp | CGCGCCCTCCGTCGTTGCACCACGCGCAGAAACAGCTaGCAGGGACAGAGTCGAGCACAGTCGGCTCCGCGC | + |
|
Preference number: 6 (lower is better) Translates to: RALRRCTTRRNS*QGQSRAQSAPR Trigger: GCGCGGAGCCGACTGTGCTCGACTCTGTCCCTGGCAGCTGTTTCTGCGCGTGGTGCAACGACGGAGGGCGCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS TCA 72 bp | CCAGGCCACACTGTGTCCCGAAGCCCACGCCTCATGTaGGGGGTAGGGCGGAACACAGGTGCCAGGGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: PGHTVSRSPRLM*GVGRNTGARGS Trigger: GCTGCCCCTGGCACCTGTGTTCCGCCCTACCCCTCACATGAGGCGTGGGCTTCGGGACACAGTGTGGCCTGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS GCA 72 bp | GCAGGGAGCCTGGCCCAGCAGGGTCTGGGCCGCAGCTaGTCCAGAGGTTGGAGCTGGCCTGTTTCTCAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: AGSLAQQGLGRS*SRGWSWPVSQP Trigger: TGGCTGAGAAACAGGCCAGCTCCAACCTCTGGAGCAGCTGCGGCCCAGACCCTGCTGGGCCAGGCTCCCTGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS CAA 90 bp | AGGGAGCCTGGCCCAGCAGGGTCTGGGCCGCAGCTGCTCCAGAGGTaGGAGCTGGCCTGTTTCTCAGCCAGGCCGTTCCAATGCTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: REPGPAGSGPQLLQR*ELACFSARPFQCCW Trigger: CCAGCAGCATTGGAACGGCCTGGCTGAGAAACAGGCCAGCTCCAACCTCTGGAGCAGCTGCGGCCCAGACCCTGCTGGGCCAGGCTCCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS GCA 72 bp | CCCACGCCTCATGTGAGGGGTAGGGCGGAACACAGGTaGCAGGGGCAGCTGCCACCGTATGCTTGGCCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: PTPHVRGRAEHR*QGQLPPYAWPG Trigger: TCCAGGCCAAGCATACGGTGGCAGCTGCCCCTGGCACCTGTGTTCCGCCCTACCCCTCACATGAGGCGTGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS CCA 72 bp | TGGGCGCCATCCAGGTACCAGGTAAGGGGTCCCCGCTaGAGTATCTGTGTCCGGCCAGGCCACACTGTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: WAPSRYQVRGPR*SICVRPGHTVS Trigger: GGACACAGTGTGGCCTGGCCGGACACAGATACTCCAGCGGGGACCCCTTACCTGGTACCTGGATGGCGCCCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS GCA 72 bp | CCACTCCGTGCCAGGTACATCTCCATAGCCTCCAGCTaGGCCTGGGGGTCACTCCGTTGGCGCTTTACCTGC | + |
|
Preference number: 6 (lower is better) Translates to: PLRARYISIASS*AWGSLRWRFTC Trigger: GCAGGTAAAGCGCCAACGGAGTGACCCCCAGGCGCAGCTGGAGGCTATGGAGATGTACCTGGCACGGAGTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028148.11 ENSMUST00000127812.3 ENSMUST00000146498.8 |
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| CDS GCA 72 bp | TGGTGGTCCTGCCGCTCCAGCCAACAGTGGGCCAGCTaGAAGGCCAAGGCAGCATTAGACCGCTGGTGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: WWSCRSSQQWAS*KAKAALDRWCA Trigger: AGCACACCAGCGGTCTAATGCTGCCTTGGCCTTGCAGCTGGCCCACTGTTGGCTGGAGCGGCAGGACCACCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS CCA 72 bp | CGTGCCAGGTACATCTCCATAGCCTCCAGCTGCGCCTaGGGGTCACTCCGTTGGCGCTTTACCTGCTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RARYISIASSCA*GSLRWRFTCSR Trigger: CCTGGAGCAGGTAAAGCGCCAACGGAGTGACCCCCAGGCGCAGCTGGAGGCTATGGAGATGTACCTGGCACG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028148.11 ENSMUST00000127812.3 ENSMUST00000146498.8 |
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| CDS CCA 72 bp | CAGGGTCTGGGCCGCAGCTGCTCCAGAGGTTGGAGCTaGCCTGTTTCTCAGCCAGGCCGTTCCAATGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: QGLGRSCSRGWS*PVSQPGRSNAA Trigger: AGCAGCATTGGAACGGCCTGGCTGAGAAACAGGCCAGCTCCAACCTCTGGAGCAGCTGCGGCCCAGACCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS CCA 72 bp | CCGCCCACCAGGTGCAGGCTTCCTGTAACCAGTACATaGATGGCAGCAGCCTCACGGAGAATGCTGGCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: PPTRCRLPVTST*MAAASRRMLAP Trigger: CGGGGCCAGCATTCTCCGTGAGGCTGCTGCCATCCATGTACTGGTTACAGGAAGCCTGCACCTGGTGGGCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS CAA 90 bp | CTGCCACCGTATGCTTGGCCTGGATACCTTCAGCTCCTGGATGTCTaGGTGGTCCTGCCGCTCCAGCCAACAGTGGGCCAGCTGCAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: LPPYAWPGYLQLLDV*VVLPLQPTVGQLQG Trigger: GCCTTGCAGCTGGCCCACTGTTGGCTGGAGCGGCAGGACCACCAAGACATCCAGGAGCTGAAGGTATCCAGGCCAAGCATACGGTGGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS TCA 72 bp | TTGGTTTGCAGGGTGTTGAGCGTGCGCACAGCATCCTaGTACTCCATGCCCGGCTCCTGTGGCGCTGGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: LVCRVLSVRTAS*YSMPGSCGAGH Trigger: GTGGCCAGCGCCACAGGAGCCGGGCATGGAGTATCAGGATGCTGTGCGCACGCTCAACACCCTGCAAACCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
||
| CDS GCA 72 bp | CGCTCCAATGACTGGCGGTACCAGTGCACACAGGCCTaGACACTGCTGGTGGTATGGGCGCCATCCAGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: RSNDWRYQCTQA*TLLVVWAPSRY Trigger: GTACCTGGATGGCGCCCATACCACCAGCAGTGTGCAGGCCTGTGTGCACTGGTACCGCCAGTCATTGGAGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS GCA 72 bp | TTGGAGCTGGCCTGTTTCTCAGCCAGGCCGTTCCAATaGTGCTGGTGTTGGAGGCAGCGGAGCAGCACCTGG | + |
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Preference number: 6 (lower is better) Translates to: LELACFSARPFQ*CWCWRQRSSTW Trigger: CCAGGTGCTGCTCCGCTGCCTCCAACACCAGCAGCATTGGAACGGCCTGGCTGAGAAACAGGCCAGCTCCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS CCA 72 bp | TGGATGTCTTGGTGGTCCTGCCGCTCCAGCCAACAGTaGGCCAGCTGCAAGGCCAAGGCAGCATTAGACCGC | + |
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Preference number: 6 (lower is better) Translates to: WMSWWSCRSSQQ*ASCKAKAALDR Trigger: GCGGTCTAATGCTGCCTTGGCCTTGCAGCTGGCCCACTGTTGGCTGGAGCGGCAGGACCACCAAGACATCCA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS CCA 72 bp | CTTGGCCTGGATACCTTCAGCTCCTGGATGTCTTGGTaGTCCTGCCGCTCCAGCCAACAGTGGGCCAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: LGLDTFSSWMSW*SCRSSQQWASC Trigger: GCAGCTGGCCCACTGTTGGCTGGAGCGGCAGGACCACCAAGACATCCAGGAGCTGAAGGTATCCAGGCCAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS CCA 72 bp | GACCCTCCATCGGTGCGTTTGCTGCGCTCCAATGACTaGCGGTACCAGTGCACACAGGCCTGCACACTGCTG | + |
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Preference number: 6 (lower is better) Translates to: DPPSVRLLRSND*RYQCTQACTLL Trigger: CAGCAGTGTGCAGGCCTGTGTGCACTGGTACCGCCAGTCATTGGAGCGCAGCAAACGCACCGATGGAGGGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS GCA 72 bp | CAGCTGCAAGGCCAAGGCAGCATTAGACCGCTGGTGTaGTCCCTCCAGACCCAGGCTCAATGGCAGTCCAAC | + |
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Preference number: 6 (lower is better) Translates to: QLQGQGSIRPLV*SLQTQAQWQSN Trigger: GTTGGACTGCCATTGAGCCTGGGTCTGGAGGGAGCACACCAGCGGTCTAATGCTGCCTTGGCCTTGCAGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS GCA 72 bp | GGCGGAACACAGGTGCCAGGGGCAGCTGCCACCGTATaGTTGGCCTGGATACCTTCAGCTCCTGGATGTCTT | + |
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Preference number: 6 (lower is better) Translates to: GGTQVPGAAATV*LAWIPSAPGCL Trigger: AAGACATCCAGGAGCTGAAGGTATCCAGGCCAAGCATACGGTGGCAGCTGCCCCTGGCACCTGTGTTCCGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS CCA 72 bp | ATGCTTGGCCTGGATACCTTCAGCTCCTGGATGTCTTaGTGGTCCTGCCGCTCCAGCCAACAGTGGGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: MLGLDTFSSWMS*WSCRSSQQWAS Trigger: GCTGGCCCACTGTTGGCTGGAGCGGCAGGACCACCAAGACATCCAGGAGCTGAAGGTATCCAGGCCAAGCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS CCA 72 bp | CCCGCTGTTGGCTGTGGGGTGGTTGAGAAGATTCCTTaGAAGGCTCTGGGGCTGAAAGATGGGATCCCGGCC | + |
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Preference number: 6 (lower is better) Translates to: PAVGCGVVEKIP*KALGLKDGIPA Trigger: GGCCGGGATCCCATCTTTCAGCCCCAGAGCCTTCCAAGGAATCTTCTCAACCACCCCACAGCCAACAGCGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS CAA 90 bp | CAGGTACATCTCCATAGCCTCCAGCTGCGCCTGGGGGTCACTCCGTaGGCGCTTTACCTGCTCCAGGTAGCTGGCATTGGTTTGCAGGGT | + |
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Preference number: 6 (lower is better) Translates to: QVHLHSLQLRLGVTP*ALYLLQVAGIGLQG Trigger: ACCCTGCAAACCAATGCCAGCTACCTGGAGCAGGTAAAGCGCCAACGGAGTGACCCCCAGGCGCAGCTGGAGGCTATGGAGATGTACCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028148.11 ENSMUST00000127812.3 ENSMUST00000146498.8 |
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| CDS TCA 72 bp | CCTGCTCCAGGTAGCTGGCATTGGTTTGCAGGGTGTTaGGCGTGCGCACAGCATCCTGATACTCCATGCCCG | + |
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Preference number: 6 (lower is better) Translates to: PAPGSWHWFAGC*ACAQHPDTPCP Trigger: CGGGCATGGAGTATCAGGATGCTGTGCGCACGCTCAACACCCTGCAAACCAATGCCAGCTACCTGGAGCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS CCA 72 bp | TGCCACCGTATGCTTGGCCTGGATACCTTCAGCTCCTaGATGTCTTGGTGGTCCTGCCGCTCCAGCCAACAG | + |
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Preference number: 6 (lower is better) Translates to: CHRMLGLDTFSS*MSWWSCRSSQQ Trigger: CTGTTGGCTGGAGCGGCAGGACCACCAAGACATCCAGGAGCTGAAGGTATCCAGGCCAAGCATACGGTGGCA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS CCA 72 bp | ATGGGATCCCGGCCTTGGCTGATCCACAGCAAGGCGTaGGAGATGCAGCTGAAAACGAGGGAGCTCGTCCTA | + |
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Preference number: 6 (lower is better) Translates to: MGSRPWLIHSKA*EMQLKTRELVL Trigger: TAGGACGAGCTCCCTCGTTTTCAGCTGCATCTCCCACGCCTTGCTGTGGATCAGCCAAGGCCGGGATCCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS CAA 90 bp | GTCACTCCGTTGGCGCTTTACCTGCTCCAGGTAGCTGGCATTGGTTaGCAGGGTGTTGAGCGTGCGCACAGCATCCTGATACTCCATGCC | + |
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Preference number: 6 (lower is better) Translates to: VTPLALYLLQVAGIG*QGVERAHSILILHA Trigger: GGCATGGAGTATCAGGATGCTGTGCGCACGCTCAACACCCTGCAAACCAATGCCAGCTACCTGGAGCAGGTAAAGCGCCAACGGAGTGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS CAA 90 bp | GTCACTCCGTTGGCGCTTTACCTGCTCCAGGTAGCTGGCATTGGTTaGCAGGGTGTTGAGCGTGCGCACAGCATCCTGAAAGGAGGCAGT | + |
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Preference number: 6 (lower is better) Translates to: VTPLALYLLQVAGIG*QGVERAHSILKGGS Trigger: ACTGCCTCCTTTCAGGATGCTGTGCGCACGCTCAACACCCTGCAAACCAATGCCAGCTACCTGGAGCAGGTAAAGCGCCAACGGAGTGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127812.3 ENSMUST00000146498.8 |
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| CDS TCA 72 bp | GGGTGGTTGAGAAGATTCCTTGGAAGGCTCTGGGGCTaGAAGATGGGATCCCGGCCTTGGCTGATCCACAGC | + |
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Preference number: 6 (lower is better) Translates to: GWLRRFLGRLWG*KMGSRPWLIHS Trigger: GCTGTGGATCAGCCAAGGCCGGGATCCCATCTTTCAGCCCCAGAGCCTTCCAAGGAATCTTCTCAACCACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS TCA 72 bp | CCTGCTCCAGGTAGCTGGCATTGGTTTGCAGGGTGTTaGGCGTGCGCACAGCATCCTGAAAGGAGGCAGTCT | + |
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Preference number: 6 (lower is better) Translates to: PAPGSWHWFAGC*ACAQHPERRQS Trigger: AGACTGCCTCCTTTCAGGATGCTGTGCGCACGCTCAACACCCTGCAAACCAATGCCAGCTACCTGGAGCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127812.3 ENSMUST00000146498.8 |
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| CDS CCA 72 bp | GCACCAGAAGTGCTTGGTGAAGAGCTCGGGGCTGATTaGTTTCCCGTTGATTCGAATCCGCTCCCGCACCTG | + |
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Preference number: 6 (lower is better) Translates to: APEVLGEELGAD*FPVDSNPLPHL Trigger: CAGGTGCGGGAGCGGATTCGAATCAACGGGAAACCAATCAGCCCCGAGCTCTTCACCAAGCACTTCTGGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028148.11 ENSMUST00000127812.3 |
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| CDS CAA 90 bp | TGCAGCAGCTTCAGCAGGGCAGCAGAGTCCCTGTCACCAGTAGAGTaGAAGAGCAAGATGTGTACTTCGGACCCTCCATCGGTGCGTTTG | + |
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Preference number: 6 (lower is better) Translates to: CSSFSRAAESLSPVE*KSKMCTSDPPSVRL Trigger: CAAACGCACCGATGGAGGGTCCGAAGTACACATCTTGCTCTTCAACTCTACTGGTGACAGGGACTCTGCTGCCCTGCTGAAGCTGCTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS TCA 72 bp | CTGAAAGGAGGCAGTCTTAGCTTCGTAAGCACTCCCTaGTGGGTCCTTCCACTCCATGGCTGCTTCCCACCA | + |
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Preference number: 6 (lower is better) Translates to: LKGGSLSFVSTP*WVLPLHGCFPP Trigger: TGGTGGGAAGCAGCCATGGAGTGGAAGGACCCATCAGGGAGTGCTTACGAAGCTAAGACTGCCTCCTTTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000127812.3 ENSMUST00000143743.2 ENSMUST00000146498.8 |
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| CDS CAA 72 bp | TTGGCGCTTTACCTGCTCCAGGTAGCTGGCATTGGTTaGCAGGGTGTTGAGCGTGCGCACAGCATCCTGATA | + |
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Preference number: 6 (lower is better) Translates to: LALYLLQVAGIG*QGVERAHSILI Trigger: TATCAGGATGCTGTGCGCACGCTCAACACCCTGCAAACCAATGCCAGCTACCTGGAGCAGGTAAAGCGCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS CAA 72 bp | TTGGCGCTTTACCTGCTCCAGGTAGCTGGCATTGGTTaGCAGGGTGTTGAGCGTGCGCACAGCATCCTGAAA | + |
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Preference number: 6 (lower is better) Translates to: LALYLLQVAGIG*QGVERAHSILK Trigger: TTTCAGGATGCTGTGCGCACGCTCAACACCCTGCAAACCAATGCCAGCTACCTGGAGCAGGTAAAGCGCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127812.3 ENSMUST00000146498.8 |
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| CDS TCA 72 bp | GCACAGGTGGAGCCCTTCCCTTTGGTCCCAGTGACATaGATAATGTTTAGCCGGTTCAAGTCCTCCACCTGC | + |
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Preference number: 6 (lower is better) Translates to: AQVEPFPLVPVT*IMFSRFKSSTC Trigger: GCAGGTGGAGGACTTGAACCGGCTAAACATTATTCATGTCACTGGGACCAAAGGGAAGGGCTCCACCTGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028148.11 ENSMUST00000127812.3 ENSMUST00000146498.8 |
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| CDS TCA 72 bp | GGAGGCAGCGGAGCAGCACCTGGTCCAGAGTCACAGTaGAGTTCTGCTGGTCTGCATTTCCTATGGATGAAA | + |
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Preference number: 6 (lower is better) Translates to: GGSGAAPGPESQ*SSAGLHFLWMK Trigger: TTTCATCCATAGGAAATGCAGACCAGCAGAACTTCACTGTGACTCTGGACCAGGTGCTGCTCCGCTGCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS TCA 72 bp | GGAAGTAAGAGGGCATGGAGACATGGCTGTCGTCCTTaGACTCCTCCAGCTGGTTATAGAGGCACCAGAAGT | + |
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Preference number: 6 (lower is better) Translates to: GSKRAWRHGCRP*TPPAGYRGTRS Trigger: ACTTCTGGTGCCTCTATAACCAGCTGGAGGAGTTCAAGGACGACAGCCATGTCTCCATGCCCTCTTACTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028148.11 ENSMUST00000127812.3 |
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| CDS CCA 72 bp | GGTCTGCATTTCCTATGGATGAAACCTCTGTCACGTTaGGGCAGAAGACAGCGTAGTCAAACTGGCAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: GLHFLWMKPLSR*GRRQRSQTGRA Trigger: AGCCCTGCCAGTTTGACTACGCTGTCTTCTGCCCCAACGTGACAGAGGTTTCATCCATAGGAAATGCAGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS GCA 72 bp | TCTCCACTGTATCTCCTAGTAGACTGGTGTGGTCAATaGCAAGAGAGGAGACTCCACACACCACTGGCTTTC | + |
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Preference number: 6 (lower is better) Translates to: SPLYLLVDWCGQ*QERRLHTPLAF Trigger: GAAAGCCAGTGGTGTGTGGAGTCTCCTCTCTTGGCATTGACCACACCAGTCTACTAGGAGATACAGTGGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028148.11 ENSMUST00000127812.3 |
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| CDS CCA 72 bp | AGCAGCACCTGGTCCAGAGTCACAGTGAAGTTCTGCTaGTCTGCATTTCCTATGGATGAAACCTCTGTCACG | + |
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Preference number: 6 (lower is better) Translates to: SSTWSRVTVKFC*SAFPMDETSVT Trigger: CGTGACAGAGGTTTCATCCATAGGAAATGCAGACCAGCAGAACTTCACTGTGACTCTGGACCAGGTGCTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS TCA 72 bp | CACAGTGAAGTTCTGCTGGTCTGCATTTCCTATGGATaGAACCTCTGTCACGTTGGGGCAGAAGACAGCGTA | + |
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Preference number: 6 (lower is better) Translates to: HSEVLLVCISYG*NLCHVGAEDSV Trigger: TACGCTGTCTTCTGCCCCAACGTGACAGAGGTTTCATCCATAGGAAATGCAGACCAGCAGAACTTCACTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS GCA 72 bp | AAGGCAGGGACACCAGGCTTAAAGATGCCCCCTTTCTaGCATGCTATTTTCTCCACTGTATCTCCTAGTAGA | + |
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Preference number: 6 (lower is better) Translates to: KAGTPGLKMPPF*HAIFSTVSPSR Trigger: TCTACTAGGAGATACAGTGGAGAAAATAGCATGGCAGAAAGGGGGCATCTTTAAGCCTGGTGTCCCTGCCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028148.11 |
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| CDS CCA 72 bp | GCCATGCTATTTTCTCCACTGTATCTCCTAGTAGACTaGTGTGGTCAATGCCAAGAGAGGAGACTCCACACA | + |
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Preference number: 6 (lower is better) Translates to: AMLFSPLYLLVD*CGQCQERRLHT Trigger: TGTGTGGAGTCTCCTCTCTTGGCATTGACCACACCAGTCTACTAGGAGATACAGTGGAGAAAATAGCATGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028148.11 ENSMUST00000127812.3 |
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