Pregenerated sensors for FOXR2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000071665Ensembl transcript IDs: ENSMUST00000096265.10, ENSMUST00000163801.2
Found 131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTTCCAGAAAGTGAGCAGTTGTCTTTCAAAAATGAAAGAGGAGGCTaGGGAGATGGCTCAGCAGTTAAAGTGCCTGCCATGCAAGCAAGA | + |
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Preference number: 1 (lower is better) Translates to: VPESEQLSFKNERGG*GDGSAVKVPAMQAR Trigger: TCTTGCTTGCATGGCAGGCACTTTAACTGCTGAGCCATCTCCCCAGCCTCCTCTTTCATTTTTGAAAGACAACTGCTCACTTTCTGGAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
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| 3UTR GCA 90 bp | TGCTATTCACACTGTCCCCCGTATAATGTTTCTTCTCAGCTTATGTaGTCAGCAAATTCCTATTTGTTCTTCAAATCTAGCTCAAAAGGC | + |
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Preference number: 1 (lower is better) Translates to: CYSHCPPYNVSSQLM*SANSYLFFKSSSKG Trigger: GCCTTTTGAGCTAGATTTGAAGAACAAATAGGAATTTGCTGAGCACATAAGCTGAGAAGAAACATTATACGGGGGACAGTGTGAATAGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
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| 3UTR-3UTR TCA 90 bp | CCTACAATCTCAGCCTTGGAATGCATGCACAGACAGGGGATCCTGAGAGCAAGCCCCTGCCTCGAAGAATaGGGTGGAAGAGCAATGGAG | + |
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Preference number: 2 (lower is better) Translates to: PTISALECMHRQGILRASPCLEE*GGRAME Trigger: CTCCATTGCTCTTCCACCTCATTCTTCGAGGCAGGG...GCTTGCTCTCAGGATCCCCTGTCTGTGCATGCATTCCAAGGCTGAGATTGTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
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| 3UTR-3UTR TCA 90 bp | TCCTGTTTCCAGGAAGGATGTCTCACCATTTCCATGGCAACTTCGCACCTCTGTCCCTGCCTCGAAGAATaGGGTGGAAGAGCAATGGAG | + |
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Preference number: 2 (lower is better) Translates to: SCFQEGCLTISMATSHLCPCLEE*GGRAME Trigger: CTCCATTGCTCTTCCACCTCATTCTTCGAGGCAGGG...ACAGAGGTGCGAAGTTGCCATGGAAATGGTGAGACATCCTTCCTGGAAACAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
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| 3UTR-3UTR CCA 90 bp | TCCTGTTTCCAGGAAGGATGTCTCACCATTTCCATGGCAACTTCGCACCTCTGTCCTCGAAGAATGAGGTaGAAGAGCAATGGAGGGAAA | + |
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Preference number: 2 (lower is better) Translates to: SCFQEGCLTISMATSHLCPRRMR*KSNGGK Trigger: TTTCCCTCCATTGCTCTTCCACCTCATTCTTCGAGG...ACAGAGGTGCGAAGTTGCCATGGAAATGGTGAGACATCCTTCCTGGAAACAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
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| 3UTR-3UTR TCA 90 bp | GATTTAATCTCTGCCTCCCCTGTAGTCACCTCTGACTACTTAACGGTAGCTAAAAGCTCTGGGTTTCACTaGAAGACCCTGCCTCGAAGA | + |
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Preference number: 2 (lower is better) Translates to: DLISASPVVTSDYLTVAKSSGFH*KTLPRR Trigger: TCTTCGAGGCAGGGTCTTTCAGTGAAACCCAGAGCT...TTTAGCTACCGTTAAGTAGTCAGAGGTGACTACAGGGGAGGCAGAGATTAAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
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| 3UTR-3UTR TCA 90 bp | CTAGAATGCATCAAACACCTGGTTAATGCTATTCACACTGTCCCCCGTATAATGCAAACTGGGTGGGCATaGGGACCTGCCTACAATCTC | + |
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Preference number: 2 (lower is better) Translates to: LECIKHLVNAIHTVPRIMQTGWA*GPAYNL Trigger: GAGATTGTAGGCAGGTCCTCATGCCCACCCAGTTTG...CATTATACGGGGGACAGTGTGAATAGCATTAACCAGGTGTTTGATGCATTCTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
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| 3UTR-3UTR CCA 90 bp | AGGCACTTCATTTTTAATGCTTTCCTGTTTCCAGGAAGGATGTCTCACCATTTCTCCCCAAAACCAAACTaGGTGGGCATGAGGACCTGC | + |
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Preference number: 2 (lower is better) Translates to: RHFIFNAFLFPGRMSHHFSPKPN*VGMRTC Trigger: GCAGGTCCTCATGCCCACCCAGTTTGGTTTTGGGGA...GAAATGGTGAGACATCCTTCCTGGAAACAGGAAAGCATTAAAAATGAAGTGCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
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| 3UTR-3UTR TCA 90 bp | CAAACAAATAACAGCTGCCTGCATTTGTCATTGCTGGAATTGGATAGCAATAGACAAACTGGGTGGGCATaGGGACCTGCCTACAATCTC | + |
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Preference number: 2 (lower is better) Translates to: QTNNSCLHLSLLELDSNRQTGWA*GPAYNL Trigger: GAGATTGTAGGCAGGTCCTCATGCCCACCCAGTTTG...TCTATTGCTATCCAATTCCAGCAATGACAAATGCAGGCAGCTGTTATTTGTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
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| 3UTR-3UTR GCA 90 bp | TCACCATTTCCATGGCAACTTCGCACCTCTGTTTTATCACAGATAAATATCGATGTGGGCATGAGGACCTaGCTACAATCTCAGCCTTGG | + |
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Preference number: 2 (lower is better) Translates to: SPFPWQLRTSVLSQINIDVGMRT*LQSQPW Trigger: CCAAGGCTGAGATTGTAGGCAGGTCCTCATGCCCAC...ATCGATATTTATCTGTGATAAAACAGAGGTGCGAAGTTGCCATGGAAATGGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
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| 3UTR-3UTR GCA 90 bp | GGTAGAGGGGCGTATTTGAGTCTCCATACTTTAAACATCAAACTTAGTTCACTTGTGGGCATGAGGACCTaGCTACAATCTCAGCCTTGG | + |
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Preference number: 2 (lower is better) Translates to: GRGAYLSLHTLNIKLSSLVGMRT*LQSQPW Trigger: CCAAGGCTGAGATTGTAGGCAGGTCCTCATGCCCAC...AAGTGAACTAAGTTTGATGTTTAAAGTATGGAGACTCAAATACGCCCCTCTACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
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| 3UTR-3UTR CCA 90 bp | TCACCATTTCCATGGCAACTTCGCACCTCTGTTTTATCACAGATAAATATCGATTCCCCAAAACCAAACTaGGTGGGCATGAGGACCTGC | + |
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Preference number: 2 (lower is better) Translates to: SPFPWQLRTSVLSQINIDSPKPN*VGMRTC Trigger: GCAGGTCCTCATGCCCACCCAGTTTGGTTTTGGGGA...ATCGATATTTATCTGTGATAAAACAGAGGTGCGAAGTTGCCATGGAAATGGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
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| 3UTR-3UTR TCA 90 bp | GATTTAATCTCTGCCTCCCCTGTAGTCACCTCTGACTACTTAACGGTAGCTAAAAGGATTACGGATGAGTaGAAGTTAATTCAGCACGGT | + |
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Preference number: 2 (lower is better) Translates to: DLISASPVVTSDYLTVAKRITDE*KLIQHG Trigger: ACCGTGCTGAATTAACTTTCACTCATCCGTAATCCT...TTTAGCTACCGTTAAGTAGTCAGAGGTGACTACAGGGGAGGCAGAGATTAAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
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| 3UTR-3UTR TCA 90 bp | TCACCATTTCCATGGCAACTTCGCACCTCTGTTTTATCACAGATAAATATCGATCCTTCACATGGCATATaGAGGTTGCCCATATCCTGG | + |
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Preference number: 2 (lower is better) Translates to: SPFPWQLRTSVLSQINIDPSHGI*RLPISW Trigger: CCAGGATATGGGCAACCTTCATATGCCATGTGAAGG...ATCGATATTTATCTGTGATAAAACAGAGGTGCGAAGTTGCCATGGAAATGGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
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| 3UTR-3UTR GCA 90 bp | CAGGAAGGATGTCTCACCATTTCCATGGCAACTTCGCACCTCTGTTTTATCACAGCCTGCATTTGTCATTaGTGGAATTGGATAGCAATA | + |
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Preference number: 2 (lower is better) Translates to: QEGCLTISMATSHLCFITACICH*WNWIAI Trigger: TATTGCTATCCAATTCCAGCAATGACAAATGCAGGC...TGTGATAAAACAGAGGTGCGAAGTTGCCATGGAAATGGTGAGACATCCTTCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
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| 3UTR-3UTR CCA 90 bp | AGGCACTTCATTTTTAATGCTTTCCTGTTTCCAGGAAGGATGTCTCACCATTTCCTACAATCTCAGCCTTaGAATGCATGCACAGACAGG | + |
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Preference number: 2 (lower is better) Translates to: RHFIFNAFLFPGRMSHHFLQSQP*NACTDR Trigger: CCTGTCTGTGCATGCATTCCAAGGCTGAGATTGTAG...GAAATGGTGAGACATCCTTCCTGGAAACAGGAAAGCATTAAAAATGAAGTGCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
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| 3UTR-3UTR CCA 90 bp | CACTTCATTTTTAATGCTTTCCTGTTTCCAGGAAGGATGTCTCACCATTTCCATAATGAAAGAGGAGGCTaGGGAGATGGCTCAGCAGTT | + |
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Preference number: 2 (lower is better) Translates to: HFIFNAFLFPGRMSHHFHNERGG*GDGSAV Trigger: AACTGCTGAGCCATCTCCCCAGCCTCCTCTTTCATT...ATGGAAATGGTGAGACATCCTTCCTGGAAACAGGAAAGCATTAAAAATGAAGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
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| 3UTR-3UTR CCA 90 bp | AAGATGCAAAAGATGAATGGTAGAGGGGCGTATTTGAGTCTCCATACTTTAAACAATGAAAGAGGAGGCTaGGGAGATGGCTCAGCAGTT | + |
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Preference number: 2 (lower is better) Translates to: KMQKMNGRGAYLSLHTLNNERGG*GDGSAV Trigger: AACTGCTGAGCCATCTCCCCAGCCTCCTCTTTCATT...GTTTAAAGTATGGAGACTCAAATACGCCCCTCTACCATTCATCTTTTGCATCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
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| 3UTR-3UTR TCA 90 bp | TTGGTGAAAAACACAAATGAGCACCAATGCATTGTCATCAAAAAGCTTAGTGTTAGCTCTGGGTTTCACTaGAAGACCCTGCCTCGAAGA | + |
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Preference number: 2 (lower is better) Translates to: LVKNTNEHQCIVIKKLSVSSGFH*KTLPRR Trigger: TCTTCGAGGCAGGGTCTTTCAGTGAAACCCAGAGCT...AACACTAAGCTTTTTGATGACAATGCATTGGTGCTCATTTGTGTTTTTCACCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
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| 3UTR-3UTR GCA 90 bp | CACTTCATTTTTAATGCTTTCCTGTTTCCAGGAAGGATGTCTCACCATTTCCATTTAAAGTGCCTGCCATaGAAGCAAGAGGACCTGCAT | + |
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Preference number: 2 (lower is better) Translates to: HFIFNAFLFPGRMSHHFHLKCLP*KQEDLH Trigger: ATGCAGGTCCTCTTGCTTGCATGGCAGGCACTTTAA...ATGGAAATGGTGAGACATCCTTCCTGGAAACAGGAAAGCATTAAAAATGAAGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
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| 3UTR-3UTR GCA 90 bp | CAAACAAATAACAGCTGCCTGCATTTGTCATTGCTGGAATTGGATAGCAATAGATCTGGATTTAATCTCTaGCTCCCCTGTAGTCACCTC | + |
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Preference number: 2 (lower is better) Translates to: QTNNSCLHLSLLELDSNRSGFNL*LPCSHL Trigger: GAGGTGACTACAGGGGAGGCAGAGATTAAATCCAGA...TCTATTGCTATCCAATTCCAGCAATGACAAATGCAGGCAGCTGTTATTTGTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
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| 3UTR-3UTR CCA 90 bp | CTAGAATGCATCAAACACCTGGTTAATGCTATTCACACTGTCCCCCGTATAATGAGTATCTATGAGCTCTaGGTTTCACTGAAAGACCCT | + |
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Preference number: 2 (lower is better) Translates to: LECIKHLVNAIHTVPRIMSIYEL*VSLKDP Trigger: AGGGTCTTTCAGTGAAACCCAGAGCTCATAGATACT...CATTATACGGGGGACAGTGTGAATAGCATTAACCAGGTGTTTGATGCATTCTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
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| 3UTR-3UTR TCA 90 bp | AAGATGCAAAAGATGAATGGTAGAGGGGCGTATTTGAGTCTCCATACTTTAAACGACTCACAGTATCTATaGGCTCTGGGTTTCACTGAA | + |
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Preference number: 2 (lower is better) Translates to: KMQKMNGRGAYLSLHTLNDSQYL*ALGFTE Trigger: TTCAGTGAAACCCAGAGCTCATAGATACTGTGAGTC...GTTTAAAGTATGGAGACTCAAATACGCCCCTCTACCATTCATCTTTTGCATCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
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| 3UTR-3UTR TCA 90 bp | CTAGAATGCATCAAACACCTGGTTAATGCTATTCACACTGTCCCCCGTATAATGTCAAATAACGTTTGGTaGAAAACACAAATGAGCACC | + |
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Preference number: 2 (lower is better) Translates to: LECIKHLVNAIHTVPRIMSNNVW*KTQMST Trigger: GGTGCTCATTTGTGTTTTTCACCAAACGTTATTTGA...CATTATACGGGGGACAGTGTGAATAGCATTAACCAGGTGTTTGATGCATTCTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
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| 3UTR-3UTR GCA 90 bp | TTAGTTCACTTTATACACATATACCTTCACATGGCATATGAAGGTTGCCCATATTTAAAGTGCCTGCCATaGAAGCAAGAGGACCTGCAT | + |
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Preference number: 2 (lower is better) Translates to: LVHFIHIYLHMAYEGCPYLKCLP*KQEDLH Trigger: ATGCAGGTCCTCTTGCTTGCATGGCAGGCACTTTAA...ATATGGGCAACCTTCATATGCCATGTGAAGGTATATGTGTATAAAGTGAACTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
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| 3UTR-3UTR GCA 90 bp | CTAGAATGCATCAAACACCTGGTTAATGCTATTCACACTGTCCCCCGTATAATGTCTTCTCAGCTTATGTaGTCAGCAAATTCCTATTTG | + |
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Preference number: 2 (lower is better) Translates to: LECIKHLVNAIHTVPRIMSSQLM*SANSYL Trigger: CAAATAGGAATTTGCTGAGCACATAAGCTGAGAAGA...CATTATACGGGGGACAGTGTGAATAGCATTAACCAGGTGTTTGATGCATTCTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
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| 3UTR-3UTR CCA 90 bp | TTGGTGAAAAACACAAATGAGCACCAATGCATTGTCATCAAAAAGCTTAGTGTTCCTCGAAGAATGAGGTaGAAGAGCAATGGAGGGAAA | + |
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Preference number: 2 (lower is better) Translates to: LVKNTNEHQCIVIKKLSVPRRMR*KSNGGK Trigger: TTTCCCTCCATTGCTCTTCCACCTCATTCTTCGAGG...AACACTAAGCTTTTTGATGACAATGCATTGGTGCTCATTTGTGTTTTTCACCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
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| 3UTR-3UTR CCA 90 bp | TCACCATTTCCATGGCAACTTCGCACCTCTGTTTTATCACAGATAAATATCGATAGTATCTATGAGCTCTaGGTTTCACTGAAAGACCCT | + |
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Preference number: 2 (lower is better) Translates to: SPFPWQLRTSVLSQINIDSIYEL*VSLKDP Trigger: AGGGTCTTTCAGTGAAACCCAGAGCTCATAGATACT...ATCGATATTTATCTGTGATAAAACAGAGGTGCGAAGTTGCCATGGAAATGGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
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| 3UTR-3UTR CCA 90 bp | AGGCACTTCATTTTTAATGCTTTCCTGTTTCCAGGAAGGATGTCTCACCATTTCTTAGATTGCTTGCCATaGTTCCTAAGACTTTCTGTC | + |
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Preference number: 2 (lower is better) Translates to: RHFIFNAFLFPGRMSHHFLDCLP*FLRLSV Trigger: GACAGAAAGTCTTAGGAACCATGGCAAGCAATCTAA...GAAATGGTGAGACATCCTTCCTGGAAACAGGAAAGCATTAAAAATGAAGTGCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
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| 3UTR-3UTR TCA 90 bp | TTGGTGAAAAACACAAATGAGCACCAATGCATTGTCATCAAAAAGCTTAGTGTTGTTGTCTTTCAAAAATaGAAGAGGAGGCTGGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: LVKNTNEHQCIVIKKLSVVVFQK*KRRLGR Trigger: TCTCCCCAGCCTCCTCTTTCATTTTTGAAAGACAAC...AACACTAAGCTTTTTGATGACAATGCATTGGTGCTCATTTGTGTTTTTCACCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
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| 3UTR-3UTR TCA 90 bp | TGCCTGCATTTGTCATTGCTGGAATTGGATAGCAATAGAACAAAGCTCTTAAGTCAGTGTTCCAGAAAGTaGGCAGTTGTCTTTCAAAAA | + |
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Preference number: 2 (lower is better) Translates to: CLHLSLLELDSNRTKLLSQCSRK*AVVFQK Trigger: TTTTTGAAAGACAACTGCTCACTTTCTGGAACACTG...ACTTAAGAGCTTTGTTCTATTGCTATCCAATTCCAGCAATGACAAATGCAGGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
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| 3UTR-3UTR TCA 90 bp | CAAACAAATAACAGCTGCCTGCATTTGTCATTGCTGGAATTGGATAGCAATAGACAGTGTTCCAGAAAGTaGGCAGTTGTCTTTCAAAAA | + |
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Preference number: 2 (lower is better) Translates to: QTNNSCLHLSLLELDSNRQCSRK*AVVFQK Trigger: TTTTTGAAAGACAACTGCTCACTTTCTGGAACACTG...TCTATTGCTATCCAATTCCAGCAATGACAAATGCAGGCAGCTGTTATTTGTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
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| 3UTR-3UTR GCA 90 bp | TCACCATTTCCATGGCAACTTCGCACCTCTGTTTTATCACAGATAAATATCGATCAAACAAATAACAGCTaGCTGCATTTGTCATTGCTG | + |
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Preference number: 2 (lower is better) Translates to: SPFPWQLRTSVLSQINIDQTNNS*LHLSLL Trigger: CAGCAATGACAAATGCAGGCAGCTGTTATTTGTTTG...ATCGATATTTATCTGTGATAAAACAGAGGTGCGAAGTTGCCATGGAAATGGTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
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| 3UTR-3UTR CCA 90 bp | CAAACAAATAACAGCTGCCTGCATTTGTCATTGCTGGAATTGGATAGCAATAGATTAGATTGCTTGCCATaGTTCCTAAGACTTTCTGTC | + |
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Preference number: 2 (lower is better) Translates to: QTNNSCLHLSLLELDSNRLDCLP*FLRLSV Trigger: GACAGAAAGTCTTAGGAACCATGGCAAGCAATCTAA...TCTATTGCTATCCAATTCCAGCAATGACAAATGCAGGCAGCTGTTATTTGTTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
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| 3UTR-3UTR CCA 90 bp | CTAGAATGCATCAAACACCTGGTTAATGCTATTCACACTGTCCCCCGTATAATGTGCATTTGTCATTGCTaGAATTGGATAGCAATAGAA | + |
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Preference number: 2 (lower is better) Translates to: LECIKHLVNAIHTVPRIMCICHC*NWIAIE Trigger: TTCTATTGCTATCCAATTCCAGCAATGACAAATGCA...CATTATACGGGGGACAGTGTGAATAGCATTAACCAGGTGTTTGATGCATTCTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
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| 3UTR CAA 90 bp | TTCAAGTTTGCTCCAATAGATGTAACATACTCTTCTATCCTTAGATaGCTTGCCATGGTTCCTAAGACTTTCTGTCTCTGTTCAAAGTGT | + |
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Preference number: 2 (lower is better) Translates to: FKFAPIDVTYSSILR*LAMVPKTFCLCSKC Trigger: ACACTTTGAACAGAGACAGAAAGTCTTAGGAACCATGGCAAGCAATCTAAGGATAGAAGAGTATGTTACATCTATTGGAGCAAACTTGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
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| 3UTR-3UTR TCA 90 bp | TCACCATTTCCATGGCAACTTCGCACCTCTGTTTTATCACAGATAAATATCGATTCAAATAACGTTTGGTaGAAAACACAAATGAGCACC | + |
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Preference number: 2 (lower is better) Translates to: SPFPWQLRTSVLSQINIDSNNVW*KTQMST Trigger: GGTGCTCATTTGTGTTTTTCACCAAACGTTATTTGA...ATCGATATTTATCTGTGATAAAACAGAGGTGCGAAGTTGCCATGGAAATGGTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
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| 3UTR GCA 72 bp | GGGCATGAGGACCTGCCTACAATCTCAGCCTTGGAATaGATGCACAGACAGGGGATCCTGAGAGCAAGCTGG | + |
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Preference number: 3 (lower is better) Translates to: GHEDLPTISALE*MHRQGILRASW Trigger: CCAGCTTGCTCTCAGGATCCCCTGTCTGTGCATGCATTCCAAGGCTGAGATTGTAGGCAGGTCCTCATGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
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| 3UTR CCA 72 bp | GCAAGAGGACCTGCATTCAGATCCCCAAAACCAAACTaGGTGGGCATGAGGACCTGCCTACAATCTCAGCCT | + |
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Preference number: 3 (lower is better) Translates to: ARGPAFRSPKPN*VGMRTCLQSQP Trigger: AGGCTGAGATTGTAGGCAGGTCCTCATGCCCACCCAGTTTGGTTTTGGGGATCTGAATGCAGGTCCTCTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
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| 3UTR GCA 72 bp | AGATCCCCAAAACCAAACTGGGTGGGCATGAGGACCTaGCTACAATCTCAGCCTTGGAATGCATGCACAGAC | + |
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Preference number: 3 (lower is better) Translates to: RSPKPNWVGMRT*LQSQPWNACTD Trigger: GTCTGTGCATGCATTCCAAGGCTGAGATTGTAGGCAGGTCCTCATGCCCACCCAGTTTGGTTTTGGGGATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
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| 3UTR GCA 72 bp | AAAGAGGAGGCTGGGGAGATGGCTCAGCAGTTAAAGTaGCTGCCATGCAAGCAAGAGGACCTGCATTCAGAT | + |
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Preference number: 3 (lower is better) Translates to: KEEAGEMAQQLK*LPCKQEDLHSD Trigger: ATCTGAATGCAGGTCCTCTTGCTTGCATGGCAGGCACTTTAACTGCTGAGCCATCTCCCCAGCCTCCTCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
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| 3UTR CCA 72 bp | GAATGCATGCACAGACAGGGGATCCTGAGAGCAAGCTaGCTAGTGAGACTCACAGTATCTATGAGCTCTGGG | + |
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Preference number: 3 (lower is better) Translates to: ECMHRQGILRAS*LVRLTVSMSSG Trigger: CCCAGAGCTCATAGATACTGTGAGTCTCACTAGCCAGCTTGCTCTCAGGATCCCCTGTCTGTGCATGCATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
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| 3UTR-3UTR CAA 90 bp | AATGAAAGAGGAGGCTGGGGAGATGGCTCAGCAGTTAAAGTGCCTGCCATGCAACCTACAATCTCAGCCTaGGAATGCATGCACAGACAG | + |
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Preference number: 3 (lower is better) Translates to: NERGGWGDGSAVKVPAMQPTISA*ECMHRQ Trigger: CTGTCTGTGCATGCATTCCAAGGCTGAGATTGTAGG...TTGCATGGCAGGCACTTTAACTGCTGAGCCATCTCCCCAGCCTCCTCTTTCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
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| 3UTR TCA 72 bp | CTGCATTCAGATCCCCAAAACCAAACTGGGTGGGCATaGGGACCTGCCTACAATCTCAGCCTTGGAATGCAT | + |
|
Preference number: 3 (lower is better) Translates to: LHSDPQNQTGWA*GPAYNLSLGMH Trigger: ATGCATTCCAAGGCTGAGATTGTAGGCAGGTCCTCATGCCCACCCAGTTTGGTTTTGGGGATCTGAATGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| 3UTR-3UTR CAA 90 bp | AATGAAAGAGGAGGCTGGGGAGATGGCTCAGCAGTTAAAGTGCCTGCCATGCAAAATCTTAATGTCAACTaGAGCCTCCACACACATGTG | + |
|
Preference number: 3 (lower is better) Translates to: NERGGWGDGSAVKVPAMQNLNVN*SLHTHV Trigger: CACATGTGTGTGGAGGCTCAAGTTGACATTAAGATT...TTGCATGGCAGGCACTTTAACTGCTGAGCCATCTCCCCAGCCTCCTCTTTCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCTGTTTCCAGGAAGGATGTCTCACCATTTCCATGGCAACTTCGCACCTCTGTATGAGCACCAATGCATaGTCATCAAAAAGCTTAGTG | + |
|
Preference number: 3 (lower is better) Translates to: SCFQEGCLTISMATSHLCMSTNA*SSKSLV Trigger: CACTAAGCTTTTTGATGACAATGCATTGGTGCTCAT...ACAGAGGTGCGAAGTTGCCATGGAAATGGTGAGACATCCTTCCTGGAAACAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGGAAGGATGTCTCACCATTTCCATGGCAACTTCGCACCTCTGTTTTATCACATTGTCATTGCTGGAATaGGATAGCAATAGAACAAAG | + |
|
Preference number: 3 (lower is better) Translates to: QEGCLTISMATSHLCFITLSLLE*DSNRTK Trigger: CTTTGTTCTATTGCTATCCAATTCCAGCAATGACAA...TGTGATAAAACAGAGGTGCGAAGTTGCCATGGAAATGGTGAGACATCCTTCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| 3UTR CCA 72 bp | TTTCCTGTTTCCAGGAAGGATGTCTCACCATTTCCATaGCAACTTCGCACCTCTGTTTTATCACAGATAAAT | + |
|
Preference number: 3 (lower is better) Translates to: FPVSRKDVSPFP*QLRTSVLSQIN Trigger: ATTTATCTGTGATAAAACAGAGGTGCGAAGTTGCCATGGAAATGGTGAGACATCCTTCCTGGAAACAGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGGTGAAAAACACAAATGAGCACCAATGCATTGTCATCAAAAAGCTTAGTGTTCCTACAATCTCAGCCTaGGAATGCATGCACAGACAG | + |
|
Preference number: 3 (lower is better) Translates to: LVKNTNEHQCIVIKKLSVPTISA*ECMHRQ Trigger: CTGTCTGTGCATGCATTCCAAGGCTGAGATTGTAGG...AACACTAAGCTTTTTGATGACAATGCATTGGTGCTCATTTGTGTTTTTCACCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGATGCAAAAGATGAATGGTAGAGGGGCGTATTTGAGTCTCCATACTTTAAACAATCTTAATGTCAACTaGAGCCTCCACACACATGTG | + |
|
Preference number: 3 (lower is better) Translates to: KMQKMNGRGAYLSLHTLNNLNVN*SLHTHV Trigger: CACATGTGTGTGGAGGCTCAAGTTGACATTAAGATT...GTTTAAAGTATGGAGACTCAAATACGCCCCTCTACCATTCATCTTTTGCATCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| 3UTR-3UTR CAA 90 bp | TCACCATTTCCATGGCAACTTCGCACCTCTGTTTTATCACAGATAAATATCGATTCTTCTATCCTTAGATaGCTTGCCATGGTTCCTAAG | + |
|
Preference number: 3 (lower is better) Translates to: SPFPWQLRTSVLSQINIDSSILR*LAMVPK Trigger: CTTAGGAACCATGGCAAGCAATCTAAGGATAGAAGA...ATCGATATTTATCTGTGATAAAACAGAGGTGCGAAGTTGCCATGGAAATGGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| 3UTR GCA 72 bp | CACTGTCCCCCGTATAATGTTTCTTCTCAGCTTATGTaGTCAGCAAATTCCTATTTGTTCTTCAAATCTAGC | + |
|
Preference number: 3 (lower is better) Translates to: HCPPYNVSSQLM*SANSYLFFKSS Trigger: GCTAGATTTGAAGAACAAATAGGAATTTGCTGAGCACATAAGCTGAGAAGAAACATTATACGGGGGACAGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGGTGAAAAACACAAATGAGCACCAATGCATTGTCATCAAAAAGCTTAGTGTTGAAGAATTGCAGCTGTaGTATAACTTTCCATCATTC | + |
|
Preference number: 3 (lower is better) Translates to: LVKNTNEHQCIVIKKLSVEELQL*YNFPSF Trigger: GAATGATGGAAAGTTATACAACAGCTGCAATTCTTC...AACACTAAGCTTTTTGATGACAATGCATTGGTGCTCATTTGTGTTTTTCACCAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| 3UTR TCA 72 bp | AGTTCACTTTATACACATATACCTTCACATGGCATATaGAGGTTGCCCATATCCTGGGTTTATTTCATATTC | + |
|
Preference number: 3 (lower is better) Translates to: SSLYTHIPSHGI*RLPISWVYFIF Trigger: GAATATGAAATAAACCCAGGATATGGGCAACCTTCATATGCCATGTGAAGGTATATGTGTATAAAGTGAACT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| 3UTR GCA 72 bp | AATGTAAGGACTTTCAATATTCAAACAAATAACAGCTaGCTGCATTTGTCATTGCTGGAATTGGATAGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: NVRTFNIQTNNS*LHLSLLELDSN Trigger: ATTGCTATCCAATTCCAGCAATGACAAATGCAGGCAGCTGTTATTTGTTTGAATATTGAAAGTCCTTACATT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| 3UTR GCA 72 bp | GCAGCCTTTGCAATTAAACATAAACAGTTTTGTATCTaGTGTAATAAGCCATTAAAAAGTAAGGTCTCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: AAFAIKHKQFCI*CNKPLKSKVSL Trigger: AAGGGAGACCTTACTTTTTAATGGCTTATTACAGCAGATACAAAACTGTTTATGTTTAATTGCAAAGGCTGC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS-3UTR TCA 90 bp | CCTACAATCTCAGCCTTGGAATGCATGCACAGACAGGGGATCCTGAGAGCAAGCCTAGATGGCTGTAGTTaGGTGGAGGGCGTGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PTISALECMHRQGILRASLDGCS*VEGVAR Trigger: CCTGGCCACGCCCTCCACTCAACTACAGCCATCTAG...GCTTGCTCTCAGGATCCCCTGTCTGTGCATGCATTCCAAGGCTGAGATTGTAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| 3UTR CAA 72 bp | CTGGGTGGGCATGAGGACCTGCCTACAATCTCAGCCTaGGAATGCATGCACAGACAGGGGATCCTGAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LGGHEDLPTISA*ECMHRQGILRA Trigger: TGCTCTCAGGATCCCCTGTCTGTGCATGCATTCCAAGGCTGAGATTGTAGGCAGGTCCTCATGCCCACCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS-3UTR TCA 90 bp | AATGAAAGAGGAGGCTGGGGAGATGGCTCAGCAGTTAAAGTGCCTGCCATGCAAGAGCCTCCTTGCTGTTaGTGGGGCACACAATGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: NERGGWGDGSAVKVPAMQEPPCC*WGTQCW Trigger: CCAACATTGTGTGCCCCATCAACAGCAAGGAGGCTC...TTGCATGGCAGGCACTTTAACTGCTGAGCCATCTCCCCAGCCTCCTCTTTCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS-3UTR TCA 90 bp | AATGAAAGAGGAGGCTGGGGAGATGGCTCAGCAGTTAAAGTGCCTGCCATGCAAAGATCTGTTGCACATTaGGGCCACAGGAAGGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NERGGWGDGSAVKVPAMQRSVAH*GHRKGC Trigger: GCAGCCCTTCCTGTGGCCTCAATGTGCAACAGATCT...TTGCATGGCAGGCACTTTAACTGCTGAGCCATCTCCCCAGCCTCCTCTTTCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS-3UTR TCA 90 bp | AATGAAAGAGGAGGCTGGGGAGATGGCTCAGCAGTTAAAGTGCCTGCCATGCAAGGCGCATGCTCTGTTTaGTGCTCTCCCTTCGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: NERGGWGDGSAVKVPAMQGACSV*CSPFEH Trigger: ATGCTCGAAGGGAGAGCATCAAACAGAGCATGCGCC...TTGCATGGCAGGCACTTTAACTGCTGAGCCATCTCCCCAGCCTCCTCTTTCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS-3UTR CCA 90 bp | CCTACAATCTCAGCCTTGGAATGCATGCACAGACAGGGGATCCTGAGAGCAAGCGCGAGGTTTTCCATCTaGCTCATCTTCAAGGTCGAC | + |
|
Preference number: 4 (lower is better) Translates to: PTISALECMHRQGILRASARFSI*LIFKVD Trigger: GTCGACCTTGAAGATGAGCCAGATGGAAAACCTCGC...GCTTGCTCTCAGGATCCCCTGTCTGTGCATGCATTCCAAGGCTGAGATTGTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS-3UTR TCA 90 bp | CCTACAATCTCAGCCTTGGAATGCATGCACAGACAGGGGATCCTGAGAGCAAGCTTGGATTTCTTCTTCTaGGGCAGTGCAGGTGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PTISALECMHRQGILRASLDFFF*GSAGGF Trigger: AAAACCACCTGCACTGCCTCAGAAGAAGAAATCCAA...GCTTGCTCTCAGGATCCCCTGTCTGTGCATGCATTCCAAGGCTGAGATTGTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS-3UTR TCA 90 bp | TCCTGTTTCCAGGAAGGATGTCTCACCATTTCCATGGCAACTTCGCACCTCTGTGGGCAGTGGAGTAAATaGGCAGCTTTTGTTGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SCFQEGCLTISMATSHLCGQWSK*AAFVAD Trigger: ATCAGCAACAAAAGCTGCTCATTTACTCCACTGCCC...ACAGAGGTGCGAAGTTGCCATGGAAATGGTGAGACATCCTTCCTGGAAACAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS-3UTR CCA 90 bp | AATGAAAGAGGAGGCTGGGGAGATGGCTCAGCAGTTAAAGTGCCTGCCATGCAACTGAGGCAGTGCAGGTaGTTTTGTCAGTTGGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: NERGGWGDGSAVKVPAMQLRQCR*FCQLDF Trigger: AAAATCCAACTGACAAAACCACCTGCACTGCCTCAG...TTGCATGGCAGGCACTTTAACTGCTGAGCCATCTCCCCAGCCTCCTCTTTCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS-3UTR TCA 90 bp | GATTTAATCTCTGCCTCCCCTGTAGTCACCTCTGACTACTTAACGGTAGCTAAATCAGCGAAAGAGCACTaGTCCATGGTACAAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: DLISASPVVTSDYLTVAKSAKEH*SMVQGR Trigger: CCTGCCTTGTACCATGGATCAGTGCTCTTTCGCTGA...TTTAGCTACCGTTAAGTAGTCAGAGGTGACTACAGGGGAGGCAGAGATTAAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS-3UTR TCA 90 bp | TGCCTGCATTTGTCATTGCTGGAATTGGATAGCAATAGAACAAAGCTCTTAAGTCTAGATGGCTGTAGTTaGGTGGAGGGCGTGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CLHLSLLELDSNRTKLLSLDGCS*VEGVAR Trigger: CCTGGCCACGCCCTCCACTCAACTACAGCCATCTAG...ACTTAAGAGCTTTGTTCTATTGCTATCCAATTCCAGCAATGACAAATGCAGGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS-3UTR TCA 90 bp | AGGCACTTCATTTTTAATGCTTTCCTGTTTCCAGGAAGGATGTCTCACCATTTCAGATCTGTTGCACATTaGGGCCACAGGAAGGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RHFIFNAFLFPGRMSHHFRSVAH*GHRKGC Trigger: GCAGCCCTTCCTGTGGCCTCAATGTGCAACAGATCT...GAAATGGTGAGACATCCTTCCTGGAAACAGGAAAGCATTAAAAATGAAGTGCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS-3UTR CCA 90 bp | AAGATGCAAAAGATGAATGGTAGAGGGGCGTATTTGAGTCTCCATACTTTAAACCCCACATCCACAAGCTaGGTTCAGCGGGAGGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: KMQKMNGRGAYLSLHTLNPTSTS*VQREDH Trigger: ATGGTCCTCCCGCTGAACCCAGCTTGTGGATGTGGG...GTTTAAAGTATGGAGACTCAAATACGCCCCTCTACCATTCATCTTTTGCATCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS-3UTR CCA 90 bp | TCACCATTTCCATGGCAACTTCGCACCTCTGTTTTATCACAGATAAATATCGATCCCACATCCACAAGCTaGGTTCAGCGGGAGGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: SPFPWQLRTSVLSQINIDPTSTS*VQREDH Trigger: ATGGTCCTCCCGCTGAACCCAGCTTGTGGATGTGGG...ATCGATATTTATCTGTGATAAAACAGAGGTGCGAAGTTGCCATGGAAATGGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS-3UTR TCA 90 bp | TGCCTGCATTTGTCATTGCTGGAATTGGATAGCAATAGAACAAAGCTCTTAAGTGGCGCATGCTCTGTTTaGTGCTCTCCCTTCGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: CLHLSLLELDSNRTKLLSGACSV*CSPFEH Trigger: ATGCTCGAAGGGAGAGCATCAAACAGAGCATGCGCC...ACTTAAGAGCTTTGTTCTATTGCTATCCAATTCCAGCAATGACAAATGCAGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS-3UTR CCA 90 bp | CCTACAATCTCAGCCTTGGAATGCATGCACAGACAGGGGATCCTGAGAGCAAGCCATCATCATCAAAATTaGATTTCTTCTTCTGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PTISALECMHRQGILRASHHHQN*ISSSEA Trigger: TGCCTCAGAAGAAGAAATCCAATTTTGATGATGATG...GCTTGCTCTCAGGATCCCCTGTCTGTGCATGCATTCCAAGGCTGAGATTGTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS-3UTR TCA 90 bp | CACTTCATTTTTAATGCTTTCCTGTTTCCAGGAAGGATGTCTCACCATTTCCATTCAGCGAAAGAGCACTaGTCCATGGTACAAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HFIFNAFLFPGRMSHHFHSAKEH*SMVQGR Trigger: CCTGCCTTGTACCATGGATCAGTGCTCTTTCGCTGA...ATGGAAATGGTGAGACATCCTTCCTGGAAACAGGAAAGCATTAAAAATGAAGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS-3UTR TCA 90 bp | AGGCACTTCATTTTTAATGCTTTCCTGTTTCCAGGAAGGATGTCTCACCATTTCGGTTTCCCTCATCAGTaGGCTTCCAAAGGAAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RHFIFNAFLFPGRMSHHFGFPHQ*ASKGKS Trigger: GCTCTTTCCTTTGGAAGCTCACTGATGAGGGAAACC...GAAATGGTGAGACATCCTTCCTGGAAACAGGAAAGCATTAAAAATGAAGTGCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS-3UTR CCA 90 bp | TCCTGTTTCCAGGAAGGATGTCTCACCATTTCCATGGCAACTTCGCACCTCTGTTCTTGGAGTATTTCTTaGAGGATGTACATTCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SCFQEGCLTISMATSHLCSWSIS*RMYIPV Trigger: AACAGGAATGTACATCCTCCAAGAAATACTCCAAGA...ACAGAGGTGCGAAGTTGCCATGGAAATGGTGAGACATCCTTCCTGGAAACAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS-3UTR TCA 90 bp | GATTTAATCTCTGCCTCCCCTGTAGTCACCTCTGACTACTTAACGGTAGCTAAACTTGGCAGAATTTTATaGATGGTATTTGGAGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DLISASPVVTSDYLTVAKLGRIL*MVFGAS Trigger: GGAGGCTCCAAATACCATTCATAAAATTCTGCCAAG...TTTAGCTACCGTTAAGTAGTCAGAGGTGACTACAGGGGAGGCAGAGATTAAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS-3UTR TCA 90 bp | TCACCATTTCCATGGCAACTTCGCACCTCTGTTTTATCACAGATAAATATCGATGGTTTCCCTCATCAGTaGGCTTCCAAAGGAAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SPFPWQLRTSVLSQINIDGFPHQ*ASKGKS Trigger: GCTCTTTCCTTTGGAAGCTCACTGATGAGGGAAACC...ATCGATATTTATCTGTGATAAAACAGAGGTGCGAAGTTGCCATGGAAATGGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS-3UTR CCA 90 bp | CAGGAAGGATGTCTCACCATTTCCATGGCAACTTCGCACCTCTGTTTTATCACAAAGAGCACTGATCCATaGTACAAGGCAGGAAAAATT | + |
|
Preference number: 4 (lower is better) Translates to: QEGCLTISMATSHLCFITKSTDP*YKAGKI Trigger: AATTTTTCCTGCCTTGTACCATGGATCAGTGCTCTT...TGTGATAAAACAGAGGTGCGAAGTTGCCATGGAAATGGTGAGACATCCTTCCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS-3UTR CCA 90 bp | CAGGAAGGATGTCTCACCATTTCCATGGCAACTTCGCACCTCTGTTTTATCACATGGGAATGGTGCACTTaGCAGAATTTTATGAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: QEGCLTISMATSHLCFITWEWCT*QNFMNG Trigger: ACCATTCATAAAATTCTGCCAAGTGCACCATTCCCA...TGTGATAAAACAGAGGTGCGAAGTTGCCATGGAAATGGTGAGACATCCTTCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS-3UTR CCA 90 bp | CAAACAAATAACAGCTGCCTGCATTTGTCATTGCTGGAATTGGATAGCAATAGAGCGAGGTTTTCCATCTaGCTCATCTTCAAGGTCGAC | + |
|
Preference number: 4 (lower is better) Translates to: QTNNSCLHLSLLELDSNRARFSI*LIFKVD Trigger: GTCGACCTTGAAGATGAGCCAGATGGAAAACCTCGC...TCTATTGCTATCCAATTCCAGCAATGACAAATGCAGGCAGCTGTTATTTGTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS-3UTR TCA 90 bp | CACTTCATTTTTAATGCTTTCCTGTTTCCAGGAAGGATGTCTCACCATTTCCATGGGCAGTGGAGTAAATaGGCAGCTTTTGTTGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: HFIFNAFLFPGRMSHHFHGQWSK*AAFVAD Trigger: ATCAGCAACAAAAGCTGCTCATTTACTCCACTGCCC...ATGGAAATGGTGAGACATCCTTCCTGGAAACAGGAAAGCATTAAAAATGAAGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS-3UTR GCA 90 bp | TCACCATTTCCATGGCAACTTCGCACCTCTGTTTTATCACAGATAAATATCGATGGCCACAGGAAGGGCTaGTTTTTAATGCTAGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SPFPWQLRTSVLSQINIDGHRKG*FLMLEQ Trigger: TTGCTCTAGCATTAAAAAGCAGCCCTTCCTGTGGCC...ATCGATATTTATCTGTGATAAAACAGAGGTGCGAAGTTGCCATGGAAATGGTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS-3UTR GCA 90 bp | AAGATGCAAAAGATGAATGGTAGAGGGGCGTATTTGAGTCTCCATACTTTAAACGGCCACAGGAAGGGCTaGTTTTTAATGCTAGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: KMQKMNGRGAYLSLHTLNGHRKG*FLMLEQ Trigger: TTGCTCTAGCATTAAAAAGCAGCCCTTCCTGTGGCC...GTTTAAAGTATGGAGACTCAAATACGCCCCTCTACCATTCATCTTTTGCATCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS-3UTR CCA 90 bp | GATTTAATCTCTGCCTCCCCTGTAGTCACCTCTGACTACTTAACGGTAGCTAAAACACTGTGTGTTTCTTaGAGTATTTCTTGGAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: DLISASPVVTSDYLTVAKTLCVS*SISWRM Trigger: CATCCTCCAAGAAATACTCCAAGAAACACACAGTGT...TTTAGCTACCGTTAAGTAGTCAGAGGTGACTACAGGGGAGGCAGAGATTAAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS-3UTR TCA 90 bp | CAAACAAATAACAGCTGCCTGCATTTGTCATTGCTGGAATTGGATAGCAATAGATTGGATTTCTTCTTCTaGGGCAGTGCAGGTGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QTNNSCLHLSLLELDSNRLDFFF*GSAGGF Trigger: AAAACCACCTGCACTGCCTCAGAAGAAGAAATCCAA...TCTATTGCTATCCAATTCCAGCAATGACAAATGCAGGCAGCTGTTATTTGTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS-3UTR CCA 90 bp | CAGGAAGGATGTCTCACCATTTCCATGGCAACTTCGCACCTCTGTTTTATCACACATCATCATCAAAATTaGATTTCTTCTTCTGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QEGCLTISMATSHLCFITHHHQN*ISSSEA Trigger: TGCCTCAGAAGAAGAAATCCAATTTTGATGATGATG...TGTGATAAAACAGAGGTGCGAAGTTGCCATGGAAATGGTGAGACATCCTTCCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS-3UTR CCA 90 bp | CAAACAAATAACAGCTGCCTGCATTTGTCATTGCTGGAATTGGATAGCAATAGAATCTTCAAGGTCGACTaGCACCTTTTCAAAGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: QTNNSCLHLSLLELDSNRIFKVD*HLFKAG Trigger: ACCTGCTTTGAAAAGGTGCCAGTCGACCTTGAAGAT...TCTATTGCTATCCAATTCCAGCAATGACAAATGCAGGCAGCTGTTATTTGTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS-3UTR TCA 90 bp | TCACCATTTCCATGGCAACTTCGCACCTCTGTTTTATCACAGATAAATATCGATCTTGGCAGAATTTTATaGATGGTATTTGGAGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SPFPWQLRTSVLSQINIDLGRIL*MVFGAS Trigger: GGAGGCTCCAAATACCATTCATAAAATTCTGCCAAG...ATCGATATTTATCTGTGATAAAACAGAGGTGCGAAGTTGCCATGGAAATGGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
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| 3UTR CAA 72 bp | GCTCCAATAGATGTAACATACTCTTCTATCCTTAGATaGCTTGCCATGGTTCCTAAGACTTTCTGTCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: APIDVTYSSILR*LAMVPKTFCLC Trigger: ACAGAGACAGAAAGTCTTAGGAACCATGGCAAGCAATCTAAGGATAGAAGAGTATGTTACATCTATTGGAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
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| CDS-3UTR CCA 90 bp | AAGATGCAAAAGATGAATGGTAGAGGGGCGTATTTGAGTCTCCATACTTTAAACGCAGAATTTTATGAATaGTATTTGGAGCCTCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: KMQKMNGRGAYLSLHTLNAEFYE*YLEPPC Trigger: GCAAGGAGGCTCCAAATACCATTCATAAAATTCTGC...GTTTAAAGTATGGAGACTCAAATACGCCCCTCTACCATTCATCTTTTGCATCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
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| CDS-3UTR CCA 90 bp | TCACCATTTCCATGGCAACTTCGCACCTCTGTTTTATCACAGATAAATATCGATACACTGTGTGTTTCTTaGAGTATTTCTTGGAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: SPFPWQLRTSVLSQINIDTLCVS*SISWRM Trigger: CATCCTCCAAGAAATACTCCAAGAAACACACAGTGT...ATCGATATTTATCTGTGATAAAACAGAGGTGCGAAGTTGCCATGGAAATGGTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS-3UTR CCA 90 bp | TTAGTTCACTTTATACACATATACCTTCACATGGCATATGAAGGTTGCCCATATATCTTCAAGGTCGACTaGCACCTTTTCAAAGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LVHFIHIYLHMAYEGCPYIFKVD*HLFKAG Trigger: ACCTGCTTTGAAAAGGTGCCAGTCGACCTTGAAGAT...ATATGGGCAACCTTCATATGCCATGTGAAGGTATATGTGTATAAAGTGAACTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| 3UTR CAA 72 bp | ACAAATAACAGCTGCCTGCATTTGTCATTGCTGGAATaGGATAGCAATAGAACAAAGCTCTTAAGTCTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TNNSCLHLSLLE*DSNRTKLLSLG Trigger: TCCTAGACTTAAGAGCTTTGTTCTATTGCTATCCAATTCCAGCAATGACAAATGCAGGCAGCTGTTATTTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
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| CDS-3UTR CCA 90 bp | CAAACAAATAACAGCTGCCTGCATTTGTCATTGCTGGAATTGGATAGCAATAGAGGTGGTTTTGTCAGTTaGATTTTATATTTGGCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: QTNNSCLHLSLLELDSNRGGFVS*ILYLAR Trigger: TCTCGCCAAATATAAAATCCAACTGACAAAACCACC...TCTATTGCTATCCAATTCCAGCAATGACAAATGCAGGCAGCTGTTATTTGTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
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| CDS-3UTR CCA 90 bp | GGTAGAGGGGCGTATTTGAGTCTCCATACTTTAAACATCAAACTTAGTTCACTTTCTTGGAGTATTTCTTaGAGGATGTACATTCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GRGAYLSLHTLNIKLSSLSWSIS*RMYIPV Trigger: AACAGGAATGTACATCCTCCAAGAAATACTCCAAGA...AAGTGAACTAAGTTTGATGTTTAAAGTATGGAGACTCAAATACGCCCCTCTACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS-3UTR CCA 90 bp | TTAGTTCACTTTATACACATATACCTTCACATGGCATATGAAGGTTGCCCATATAAGAGCACTGATCCATaGTACAAGGCAGGAAAAATT | + |
|
Preference number: 4 (lower is better) Translates to: LVHFIHIYLHMAYEGCPYKSTDP*YKAGKI Trigger: AATTTTTCCTGCCTTGTACCATGGATCAGTGCTCTT...ATATGGGCAACCTTCATATGCCATGTGAAGGTATATGTGTATAAAGTGAACTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS-3UTR CCA 90 bp | TTAGTTCACTTTATACACATATACCTTCACATGGCATATGAAGGTTGCCCATATTGGGAATGGTGCACTTaGCAGAATTTTATGAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: LVHFIHIYLHMAYEGCPYWEWCT*QNFMNG Trigger: ACCATTCATAAAATTCTGCCAAGTGCACCATTCCCA...ATATGGGCAACCTTCATATGCCATGTGAAGGTATATGTGTATAAAGTGAACTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS-3UTR CCA 90 bp | TTGGTGAAAAACACAAATGAGCACCAATGCATTGTCATCAAAAAGCTTAGTGTTGGTGGTTTTGTCAGTTaGATTTTATATTTGGCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LVKNTNEHQCIVIKKLSVGGFVS*ILYLAR Trigger: TCTCGCCAAATATAAAATCCAACTGACAAAACCACC...AACACTAAGCTTTTTGATGACAATGCATTGGTGCTCATTTGTGTTTTTCACCAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
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| 3UTR CAA 72 bp | AAGAAGATGCAAAAGATGAATGGTAGAGGGGCGTATTaGAGTCTCCATACTTTAAACATCAAACTTAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KKMQKMNGRGAY*SLHTLNIKLSS Trigger: TGAACTAAGTTTGATGTTTAAAGTATGGAGACTCAAATACGCCCCTCTACCATTCATCTTTTGCATCTTCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| 3UTR CAA 72 bp | ACTTTCAATATTCAAACAAATAACAGCTGCCTGCATTaGTCATTGCTGGAATTGGATAGCAATAGAACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TFNIQTNNSCLH*SLLELDSNRTK Trigger: CTTTGTTCTATTGCTATCCAATTCCAGCAATGACAAATGCAGGCAGCTGTTATTTGTTTGAATATTGAAAGT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS TCA 90 bp | CCAAGACACGGGTGTCCTCCTGAAAGAATCGGTTTCCCTCATCAGTaGGCTTCCAAAGGAAAGAGCGAGGTTTTCCATCTGGCTCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: PRHGCPPERIGFPHQ*ASKGKSEVFHLAHL Trigger: AAGATGAGCCAGATGGAAAACCTCGCTCTTTCCTTTGGAAGCTCACTGATGAGGGAAACCGATTCTTTCAGGAGGACACCCGTGTCTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
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| CDS CCA 90 bp | TCCCTCATCAGTGAGCTTCCAAAGGAAAGAGCGAGGTTTTCCATCTaGCTCATCTTCAAGGTCGACTGGCACCTTTTCAAAGCAGGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: SLISELPKERARFSI*LIFKVDWHLFKAGQ Trigger: CTGACCTGCTTTGAAAAGGTGCCAGTCGACCTTGAAGATGAGCCAGATGGAAAACCTCGCTCTTTCCTTTGGAAGCTCACTGATGAGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS TCA 90 bp | TCAGACTCGCCAGTCTGTGGGAATGGTGCACTTGGCAGAATTTTATaGATGGTATTTGGAGCCTCCTTGCTGTTGATGGGGCACACAATG | + |
|
Preference number: 5 (lower is better) Translates to: SDSPVCGNGALGRIL*MVFGASLLLMGHTM Trigger: CATTGTGTGCCCCATCAACAGCAAGGAGGCTCCAAATACCATTCATAAAATTCTGCCAAGTGCACCATTCCCACAGACTGGCGAGTCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS-3UTR CAA 90 bp | TCACCATTTCCATGGCAACTTCGCACCTCTGTTTTATCACAGATAAATATCGATTGGCGCATGCTCTGTTaGATGCTCTCCCTTCGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SPFPWQLRTSVLSQINIDWRMLC*MLSLRA Trigger: TGCTCGAAGGGAGAGCATCAAACAGAGCATGCGCCA...ATCGATATTTATCTGTGATAAAACAGAGGTGCGAAGTTGCCATGGAAATGGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS-3UTR CAA 90 bp | GGTAGAGGGGCGTATTTGAGTCTCCATACTTTAAACATCAAACTTAGTTCACTTTGGCGCATGCTCTGTTaGATGCTCTCCCTTCGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GRGAYLSLHTLNIKLSSLWRMLC*MLSLRA Trigger: TGCTCGAAGGGAGAGCATCAAACAGAGCATGCGCCA...AAGTGAACTAAGTTTGATGTTTAAAGTATGGAGACTCAAATACGCCCCTCTACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS-3UTR CAA 90 bp | CTAGAATGCATCAAACACCTGGTTAATGCTATTCACACTGTCCCCCGTATAATGGTGGGAATGGTGCACTaGGCAGAATTTTATGAATGG | + |
|
Preference number: 5 (lower is better) Translates to: LECIKHLVNAIHTVPRIMVGMVH*AEFYEW Trigger: CCATTCATAAAATTCTGCCAAGTGCACCATTCCCAC...CATTATACGGGGGACAGTGTGAATAGCATTAACCAGGTGTTTGATGCATTCTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS-3UTR CAA 90 bp | AGGCACTTCATTTTTAATGCTTTCCTGTTTCCAGGAAGGATGTCTCACCATTTCAGTTGGATTTTATATTaGGCGAGACTCTGCTCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: RHFIFNAFLFPGRMSHHFSWILY*ARLCSA Trigger: CGCTGAGCAGAGTCTCGCCAAATATAAAATCCAACT...GAAATGGTGAGACATCCTTCCTGGAAACAGGAAAGCATTAAAAATGAAGTGCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS-3UTR CAA 90 bp | AAGATGCAAAAGATGAATGGTAGAGGGGCGTATTTGAGTCTCCATACTTTAAACAGTTGGATTTTATATTaGGCGAGACTCTGCTCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: KMQKMNGRGAYLSLHTLNSWILY*ARLCSA Trigger: CGCTGAGCAGAGTCTCGCCAAATATAAAATCCAACT...GTTTAAAGTATGGAGACTCAAATACGCCCCTCTACCATTCATCTTTTGCATCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS-3UTR CAA 90 bp | TGCCTGCATTTGTCATTGCTGGAATTGGATAGCAATAGAACAAAGCTCTTAAGTAATGAGCAGCTTTTGTaGCTGATGATGCTCAGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: CLHLSLLELDSNRTKLLSNEQLL*LMMLSV Trigger: CACACTGAGCATCATCAGCAACAAAAGCTGCTCATT...ACTTAAGAGCTTTGTTCTATTGCTATCCAATTCCAGCAATGACAAATGCAGGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS-3UTR CAA 90 bp | GGTAGAGGGGCGTATTTGAGTCTCCATACTTTAAACATCAAACTTAGTTCACTTAATGAGCAGCTTTTGTaGCTGATGATGCTCAGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: GRGAYLSLHTLNIKLSSLNEQLL*LMMLSV Trigger: CACACTGAGCATCATCAGCAACAAAAGCTGCTCATT...AAGTGAACTAAGTTTGATGTTTAAAGTATGGAGACTCAAATACGCCCCTCTACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS-3UTR CAA 90 bp | TGCCTGCATTTGTCATTGCTGGAATTGGATAGCAATAGAACAAAGCTCTTAAGTCACACTGTGTGTTTCTaGGAGTATTTCTTGGAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: CLHLSLLELDSNRTKLLSHTVCF*EYFLED Trigger: ATCCTCCAAGAAATACTCCAAGAAACACACAGTGTG...ACTTAAGAGCTTTGTTCTATTGCTATCCAATTCCAGCAATGACAAATGCAGGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS-3UTR CAA 90 bp | TCACCATTTCCATGGCAACTTCGCACCTCTGTTTTATCACAGATAAATATCGATCACACTGTGTGTTTCTaGGAGTATTTCTTGGAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: SPFPWQLRTSVLSQINIDHTVCF*EYFLED Trigger: ATCCTCCAAGAAATACTCCAAGAAACACACAGTGTG...ATCGATATTTATCTGTGATAAAACAGAGGTGCGAAGTTGCCATGGAAATGGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS-3UTR CAA 90 bp | TGCCTGCATTTGTCATTGCTGGAATTGGATAGCAATAGAACAAAGCTCTTAAGTAGGTGGTTTTGTCAGTaGGATTTTATATTTGGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: CLHLSLLELDSNRTKLLSRWFCQ*DFIFGE Trigger: CTCGCCAAATATAAAATCCAACTGACAAAACCACCT...ACTTAAGAGCTTTGTTCTATTGCTATCCAATTCCAGCAATGACAAATGCAGGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS-3UTR CAA 90 bp | TTAGTTCACTTTATACACATATACCTTCACATGGCATATGAAGGTTGCCCATATAGGTGGTTTTGTCAGTaGGATTTTATATTTGGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: LVHFIHIYLHMAYEGCPYRWFCQ*DFIFGE Trigger: CTCGCCAAATATAAAATCCAACTGACAAAACCACCT...ATATGGGCAACCTTCATATGCCATGTGAAGGTATATGTGTATAAAGTGAACTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS CCA 72 bp | GGGCGTGGCCAGGACTCCTTCTCCCGGTGGGGGCCATaGCACACTGTGTGTTTCTTGGAGTATTTCTTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: GRGQDSFSRWGP*HTVCFLEYFLE Trigger: CTCCAAGAAATACTCCAAGAAACACACAGTGTGCCATGGCCCCCACCGGGAGAAGGAGTCCTGGCCACGCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS CAA 72 bp | ACTGGCACCTTTTCAAAGCAGGTCAGGGAGCAGAGGTaGTGGCGAATGGTGTTTTTCCAGCCCTCTGGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: TGTFSKQVREQR*WRMVFFQPSGA Trigger: AGCACCAGAGGGCTGGAAAAACACCATTCGCCACAACCTCTGCTCCCTGACCTGCTTTGAAAAGGTGCCAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
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| CDS CAA 90 bp | TCAAGGTCGACTGGCACCTTTTCAAAGCAGGTCAGGGAGCAGAGGTaGTGGCGAATGGTGTTTTTCCAGCCCTCTGGTGCTGTCCGAAAA | + |
|
Preference number: 6 (lower is better) Translates to: SRSTGTFSKQVREQR*WRMVFFQPSGAVRK Trigger: TTTTCGGACAGCACCAGAGGGCTGGAAAAACACCATTCGCCACAACCTCTGCTCCCTGACCTGCTTTGAAAAGGTGCCAGTCGACCTTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS TCA 72 bp | TGCTTTTTAATGCTAGAGCAACTAGATGGCTGTAGTTaGGTGGAGGGCGTGGCCAGGACTCCTTCTCCCGGT | + |
|
Preference number: 6 (lower is better) Translates to: CFLMLEQLDGCS*VEGVARTPSPG Trigger: ACCGGGAGAAGGAGTCCTGGCCACGCCCTCCACTCAACTACAGCCATCTAGTTGCTCTAGCATTAAAAAGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS CCA 72 bp | GCGAGGTTTTCCATCTGGCTCATCTTCAAGGTCGACTaGCACCTTTTCAAAGCAGGTCAGGGAGCAGAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: ARFSIWLIFKVD*HLFKAGQGAEV Trigger: AACCTCTGCTCCCTGACCTGCTTTGAAAAGGTGCCAGTCGACCTTGAAGATGAGCCAGATGGAAAACCTCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS CCA 72 bp | TGGCGAGACTCTGCTCAGCGAAAGAGCACTGATCCATaGTACAAGGCAGGAAAAATTCATTCCCCATGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: WRDSAQRKSTDP*YKAGKIHSPCP Trigger: GGGACATGGGGAATGAATTTTTCCTGCCTTGTACCATGGATCAGTGCTCTTTCGCTGAGCAGAGTCTCGCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS TCA 72 bp | CCAGTCTGTGGGAATGGTGCACTTGGCAGAATTTTATaGATGGTATTTGGAGCCTCCTTGCTGTTGATGGGG | + |
|
Preference number: 6 (lower is better) Translates to: PVCGNGALGRIL*MVFGASLLLMG Trigger: CCCCATCAACAGCAAGGAGGCTCCAAATACCATTCATAAAATTCTGCCAAGTGCACCATTCCCACAGACTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS CCA 72 bp | AGCTGGGTTCAGCGGGAGGACCATCATCATCAAAATTaGATTTCTTCTTCTGAGGCAGTGCAGGTGGTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: SWVQREDHHHQN*ISSSEAVQVVL Trigger: CAAAACCACCTGCACTGCCTCAGAAGAAGAAATCCAATTTTGATGATGATGGTCCTCCCGCTGAACCCAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS CAA 72 bp | GAAATCAGGGGCAGTGGAGTAAATGAGCAGCTTTTGTaGCTGATGATGCTCAGTGTGGAGAACAGACAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: EIRGSGVNEQLL*LMMLSVENRQG Trigger: TCCCTGTCTGTTCTCCACACTGAGCATCATCAGCAACAAAAGCTGCTCATTTACTCCACTGCCCCTGATTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS CCA 72 bp | GTAGTCAGACTCGCCAGTCTGTGGGAATGGTGCACTTaGCAGAATTTTATGAATGGTATTTGGAGCCTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: VVRLASLWEWCT*QNFMNGIWSLL Trigger: AAGGAGGCTCCAAATACCATTCATAAAATTCTGCCAAGTGCACCATTCCCACAGACTGGCGAGTCTGACTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS CCA 72 bp | AGTGAGCTTCCAAAGGAAAGAGCGAGGTTTTCCATCTaGCTCATCTTCAAGGTCGACTGGCACCTTTTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: SELPKERARFSI*LIFKVDWHLFK Trigger: TTTGAAAAGGTGCCAGTCGACCTTGAAGATGAGCCAGATGGAAAACCTCGCTCTTTCCTTTGGAAGCTCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS CAA 72 bp | AGTAGTCAGACTCGCCAGTCTGTGGGAATGGTGCACTaGGCAGAATTTTATGAATGGTATTTGGAGCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SSQTRQSVGMVH*AEFYEWYLEPP Trigger: AGGAGGCTCCAAATACCATTCATAAAATTCTGCCAAGTGCACCATTCCCACAGACTGGCGAGTCTGACTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS CAA 72 bp | GGGCCATGGCACACTGTGTGTTTCTTGGAGTATTTCTaGGAGGATGTACATTCCTGTTCCTTAGTCTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: GPWHTVCFLEYF*EDVHSCSLVSS Trigger: AGAGGAGACTAAGGAACAGGAATGTACATCCTCCAAGAAATACTCCAAGAAACACACAGTGTGCCATGGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS TCA 72 bp | TTATATTTGGCGAGACTCTGCTCAGCGAAAGAGCACTaGTCCATGGTACAAGGCAGGAAAAATTCATTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: LYLARLCSAKEH*SMVQGRKNSFP Trigger: GGGGAATGAATTTTTCCTGCCTTGTACCATGGATCAGTGCTCTTTCGCTGAGCAGAGTCTCGCCAAATATAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS CAA 72 bp | TATGAAATCAGGGGCAGTGGAGTAAATGAGCAGCTTTaGTTGCTGATGATGCTCAGTGTGGAGAACAGACAG | + |
|
Preference number: 6 (lower is better) Translates to: YEIRGSGVNEQL*LLMMLSVENRQ Trigger: CTGTCTGTTCTCCACACTGAGCATCATCAGCAACAAAAGCTGCTCATTTACTCCACTGCCCCTGATTTCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS CCA 72 bp | GAATGGTGCACTTGGCAGAATTTTATGAATGGTATTTaGAGCCTCCTTGCTGTTGATGGGGCACACAATGTT | + |
|
Preference number: 6 (lower is better) Translates to: EWCTWQNFMNGI*SLLAVDGAHNV Trigger: AACATTGTGTGCCCCATCAACAGCAAGGAGGCTCCAAATACCATTCATAAAATTCTGCCAAGTGCACCATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
||
| CDS CAA 90 bp | CATCATCAAAATTGGATTTCTTCTTCTGAGGCAGTGCAGGTGGTTTaGTCAGTTGGATTTTATATTTGGCGAGACTCTGCTCAGCGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: HHQNWISSSEAVQVV*SVGFYIWRDSAQRK Trigger: CTTTCGCTGAGCAGAGTCTCGCCAAATATAAAATCCAACTGACAAAACCACCTGCACTGCCTCAGAAGAAGAAATCCAATTTTGATGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096265.10 ENSMUST00000163801.2 |
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