Pregenerated sensors for FOXO4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042903Ensembl transcript IDs: ENSMUST00000062000.6, ENSMUST00000138437.3
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCGTCAGGCTCTCCCTTCCCTGTTCCTCTCCACAGCCCTGCTTGCTaGTACACAGCCTTCCACATAACCCTGGCAGACCACAACAGGGAA | + |
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Preference number: 1 (lower is better) Translates to: SSGSPFPVPLHSPAC*YTAFHITLADHNRE Trigger: TTCCCTGTTGTGGTCTGCCAGGGTTATGTGGAAGGCTGTGTAGCAGCAAGCAGGGCTGTGGAGAGGAACAGGGAAGGGAGAGCCTGACGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
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| 3UTR GCA 90 bp | AACTCGTCAGGCTCTCCCTTCCCTGTTCCTCTCCACAGCCCTGCTTaGTGCTACACAGCCTTCCACATAACCCTGGCAGACCACAACAGG | + |
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Preference number: 1 (lower is better) Translates to: NSSGSPFPVPLHSPA*CYTAFHITLADHNR Trigger: CCTGTTGTGGTCTGCCAGGGTTATGTGGAAGGCTGTGTAGCAGCAAGCAGGGCTGTGGAGAGGAACAGGGAAGGGAGAGCCTGACGAGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
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| 3UTR CCA 90 bp | TCCTTCTTTCACGCCCCTCCCAGGCCCCAAGCCAATTTCAGGACTTaGATGCTCTCTCTGGGAGCACTAACCTGCACTGGTCAAATAAGA | + |
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Preference number: 1 (lower is better) Translates to: SFFHAPPRPQANFRT*MLSLGALTCTGQIR Trigger: TCTTATTTGACCAGTGCAGGTTAGTGCTCCCAGAGAGAGCATCCAAGTCCTGAAATTGGCTTGGGGCCTGGGAGGGGCGTGAAAGAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
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| 3UTR GCA 90 bp | CAAGCCAATTTCAGGACTTGGATGCTCTCTCTGGGAGCACTAACCTaGACTGGTCAAATAAGAGTGTGCTTGCCCCACAACAGCACTCTC | + |
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Preference number: 1 (lower is better) Translates to: QANFRTWMLSLGALT*TGQIRVCLPHNSTL Trigger: GAGAGTGCTGTTGTGGGGCAAGCACACTCTTATTTGACCAGTGCAGGTTAGTGCTCCCAGAGAGAGCATCCAAGTCCTGAAATTGGCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
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| 3UTR-3UTR GCA 90 bp | GCTGGGGTGGAGGAGCCCCAGATGGCCTCTCTGGCAGGTGCTAGTAAACCTGATTCCTCTCCACAGCCCTaGTTGCTGCTACACAGCCTT | + |
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Preference number: 2 (lower is better) Translates to: AGVEEPQMASLAGASKPDSSPQP*LLLHSL Trigger: AAGGCTGTGTAGCAGCAAGCAGGGCTGTGGAGAGGA...ATCAGGTTTACTAGCACCTGCCAGAGAGGCCATCTGGGGCTCCTCCACCCCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
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| 3UTR-3UTR TCA 90 bp | CCTGGCAGACCACAACAGGGAAGAAGGGCAGGGACAGCTGTCCCAGGCCTTGAAAGTGATTTGGCCTGGTaGGCCACTCCAGTGCTCAAA | + |
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Preference number: 2 (lower is better) Translates to: PGRPQQGRRAGTAVPGLESDLAW*ATPVLK Trigger: TTTGAGCACTGGAGTGGCTCACCAGGCCAAATCACT...TTCAAGGCCTGGGACAGCTGTCCCTGCCCTTCTTCCCTGTTGTGGTCTGCCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
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| 3UTR-3UTR TCA 90 bp | AGGCCCCAAGCCAATTTCAGGACTTGGATGCTCTCTCTGGGAGCACTAACCTGCCCTAGGAGGTGGGAATaGGGAAATCAATGGTGGCCC | + |
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Preference number: 2 (lower is better) Translates to: RPQANFRTWMLSLGALTCPRRWE*GNQWWP Trigger: GGGCCACCATTGATTTCCTCATTCCCACCTCCTAGG...GCAGGTTAGTGCTCCCAGAGAGAGCATCCAAGTCCTGAAATTGGCTTGGGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
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| 3UTR-3UTR TCA 90 bp | ACCCTGGCAGACCACAACAGGGAAGAAGGGCAGGGACAGCTGTCCCAGGCCTTGCAGAATGTGGGGACCTaGCTTAGGTTTCTTTGCTTA | + |
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Preference number: 2 (lower is better) Translates to: TLADHNREEGQGQLSQALQNVGT*LRFLCL Trigger: TAAGCAAAGAAACCTAAGTCAGGTCCCCACATTCTG...CAAGGCCTGGGACAGCTGTCCCTGCCCTTCTTCCCTGTTGTGGTCTGCCAGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
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| 3UTR-3UTR TCA 90 bp | CTTTCACGCCCCTCCCAGGCCCCAAGCCAATTTCAGGACTTGGATGCTCTCTCTTCTTCTAGGCACAAGTaGACAGAATGTGGGGACCTG | + |
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Preference number: 2 (lower is better) Translates to: LSRPSQAPSQFQDLDALSSSRHK*TECGDL Trigger: CAGGTCCCCACATTCTGTTCACTTGTGCCTAGAAGA...AGAGAGAGCATCCAAGTCCTGAAATTGGCTTGGGGCCTGGGAGGGGCGTGAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
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| 3UTR-3UTR GCA 90 bp | CTTTCACGCCCCTCCCAGGCCCCAAGCCAATTTCAGGACTTGGATGCTCTCTCTGGTGAGCCACTCCAGTaGTCAAAACTTGGCCCTTTT | + |
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Preference number: 2 (lower is better) Translates to: LSRPSQAPSQFQDLDALSGEPLQ*SKLGPF Trigger: AAAAGGGCCAAGTTTTGAGCACTGGAGTGGCTCACC...AGAGAGAGCATCCAAGTCCTGAAATTGGCTTGGGGCCTGGGAGGGGCGTGAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
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| 3UTR CAA 90 bp | GCAGACCACAACAGGGAAGAAGGGCAGGGACAGCTGTCCCAGGCCTaGAACAGCGAGGTCTCTGTACCTAACTTTACTACCCTAAATCCT | + |
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Preference number: 2 (lower is better) Translates to: ADHNREEGQGQLSQA*NSEVSVPNFTTLNP Trigger: AGGATTTAGGGTAGTAAAGTTAGGTACAGAGACCTCGCTGTTCAAGGCCTGGGACAGCTGTCCCTGCCCTTCTTCCCTGTTGTGGTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
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| 3UTR-3UTR TCA 90 bp | CCTAAATCCTTCCTTCTTTCACGCCCCTCCCAGGCCCCAAGCCAATTTCAGGACAATTTCCTCAACACTTaGGTGTGTTGCCACCAATCC | + |
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Preference number: 2 (lower is better) Translates to: PKSFLLSRPSQAPSQFQDNFLNT*VCCHQS Trigger: GGATTGGTGGCAACACACTCAAGTGTTGAGGAAATT...GTCCTGAAATTGGCTTGGGGCCTGGGAGGGGCGTGAAAGAAGGAAGGATTTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
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| 3UTR-3UTR TCA 90 bp | CCTTCTTTCACGCCCCTCCCAGGCCCCAAGCCAATTTCAGGACTTGGATGCTCTTGTATCATGTCACTATaGCAAAGCCTTCGGAAAGAA | + |
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Preference number: 2 (lower is better) Translates to: PSFTPLPGPKPISGLGCSCIMSL*QSLRKE Trigger: TTCTTTCCGAAGGCTTTGTCATAGTGACATGATACA...AGAGCATCCAAGTCCTGAAATTGGCTTGGGGCCTGGGAGGGGCGTGAAAGAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
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| 3UTR-3UTR CCA 90 bp | CAAAGGCAGGGTAATAAGGCCACTGGTGACTTCACATTTCAACAGCATTGCTGGCTCAAGGAGGAAAAGTaGATAAGGACAGGCCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: QRQGNKATGDFTFQQHCWLKEEK*IRTGLA Trigger: AGCCAGGCCTGTCCTTATCCACTTTTCCTCCTTGAG...CCAGCAATGCTGTTGAAATGTGAAGTCACCAGTGGCCTTATTACCCTGCCTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
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| 3UTR-3UTR CCA 90 bp | GAGGTCTCTGTACCTAACTTTACTACCCTAAATCCTTCCTTCTTTCACGCCCCTGCCAATTTCAGGACTTaGATGCTCTCTCTGGGAGCA | + |
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Preference number: 2 (lower is better) Translates to: EVSVPNFTTLNPSFFHAPANFRT*MLSLGA Trigger: TGCTCCCAGAGAGAGCATCCAAGTCCTGAAATTGGC...AGGGGCGTGAAAGAAGGAAGGATTTAGGGTAGTAAAGTTAGGTACAGAGACCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
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| 3UTR-3UTR CCA 90 bp | ATAGAGTCTGTAGTGTTTGTATCATGTCACTATGACAAAGCCTTCGGAAAGAAAAGGGTCCCAAACTCCTaGGGAGGGCTCAAGGAGGAA | + |
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Preference number: 2 (lower is better) Translates to: IESVVFVSCHYDKAFGKKRVPNS*GGLKEE Trigger: TTCCTCCTTGAGCCCTCCCCAGGAGTTTGGGACCCT...TTTCTTTCCGAAGGCTTTGTCATAGTGACATGATACAAACACTACAGACTCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
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| 3UTR GCA 72 bp | GTCAGGCTCTCCCTTCCCTGTTCCTCTCCACAGCCCTaGTTGCTGCTACACAGCCTTCCACATAACCCTGGC | + |
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Preference number: 3 (lower is better) Translates to: VRLSLPCSSPQP*LLLHSLPHNPG Trigger: GCCAGGGTTATGTGGAAGGCTGTGTAGCAGCAAGCAGGGCTGTGGAGAGGAACAGGGAAGGGAGAGCCTGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
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| 3UTR CCA 72 bp | CACGCCCCTCCCAGGCCCCAAGCCAATTTCAGGACTTaGATGCTCTCTCTGGGAGCACTAACCTGCACTGGT | + |
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Preference number: 3 (lower is better) Translates to: HAPPRPQANFRT*MLSLGALTCTG Trigger: ACCAGTGCAGGTTAGTGCTCCCAGAGAGAGCATCCAAGTCCTGAAATTGGCTTGGGGCCTGGGAGGGGCGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
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| 3UTR-3UTR CAA 90 bp | AGGCCAGGCGCTGACACAGGAAATGATGGGAACCCACAGCAGGAGTGGGGGAGGCAAATAAGAGTGTGCTaGCCCCACAACAGCACTCTC | + |
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Preference number: 3 (lower is better) Translates to: RPGADTGNDGNPQQEWGRQIRVC*PHNSTL Trigger: GAGAGTGCTGTTGTGGGGCAAGCACACTCTTATTTG...CCTCCCCCACTCCTGCTGTGGGTTCCCATCATTTCCTGTGTCAGCGCCTGGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
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| 3UTR CCA 72 bp | GACTTGGATGCTCTCTCTGGGAGCACTAACCTGCACTaGTCAAATAAGAGTGTGCTTGCCCCACAACAGCAC | + |
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Preference number: 3 (lower is better) Translates to: DLDALSGSTNLH*SNKSVLAPQQH Trigger: GTGCTGTTGTGGGGCAAGCACACTCTTATTTGACCAGTGCAGGTTAGTGCTCCCAGAGAGAGCATCCAAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
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| 3UTR CCA 72 bp | ACACTTCCCCACTCCAATCTAGCACATGATACAATCTaGGTAGGCCAGGCGCTGACACAGGAAATGATGGGA | + |
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Preference number: 3 (lower is better) Translates to: TLPHSNLAHDTI*VGQALTQEMMG Trigger: TCCCATCATTTCCTGTGTCAGCGCCTGGCCTACCCAGATTGTATCATGTGCTAGATTGGAGTGGGGAAGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
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| CDS-3UTR CCA 90 bp | AGGCCAGGCGCTGACACAGGAAATGATGGGAACCCACAGCAGGAGTGGGGGAGGCCCAGGATTCCCGGCTaGGGGCCCCCTGCCGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: RPGADTGNDGNPQQEWGRPRIPG*GPPAGS Trigger: AGAGCCGGCAGGGGGCCCCCAGCCGGGAATCCTGGG...CCTCCCCCACTCCTGCTGTGGGTTCCCATCATTTCCTGTGTCAGCGCCTGGCCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
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| CDS-3UTR CCA 90 bp | CCTGGCAGACCACAACAGGGAAGAAGGGCAGGGACAGCTGTCCCAGGCCTTGAAGCCCCCTGCCGGCTCTaGGAGCCGAGAGGGCAACAG | + |
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Preference number: 4 (lower is better) Translates to: PGRPQQGRRAGTAVPGLEAPCRL*EPRGQQ Trigger: CTGTTGCCCTCTCGGCTCCCAGAGCCGGCAGGGGGC...TTCAAGGCCTGGGACAGCTGTCCCTGCCCTTCTTCCCTGTTGTGGTCTGCCAGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
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| CDS-3UTR GCA 90 bp | ACCCTGGCAGACCACAACAGGGAAGAAGGGCAGGGACAGCTGTCCCAGGCCTTGTCTTGGGGCCTTTGCTaGGGCCCCGGAGCAGCTTGC | + |
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Preference number: 4 (lower is better) Translates to: TLADHNREEGQGQLSQALSWGLC*GPGAAC Trigger: GCAAGCTGCTCCGGGGCCGCAGCAAAGGCCCCAAGA...CAAGGCCTGGGACAGCTGTCCCTGCCCTTCTTCCCTGTTGTGGTCTGCCAGGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
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| CDS-3UTR CCA 90 bp | CCTGGCAGACCACAACAGGGAAGAAGGGCAGGGACAGCTGTCCCAGGCCTTGAATGCTGCTGCTATCCATaGAGGCAGCCCTGCGGCGGG | + |
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Preference number: 4 (lower is better) Translates to: PGRPQQGRRAGTAVPGLECCCYP*RQPCGG Trigger: CCCGCCGCAGGGCTGCCTCCATGGATAGCAGCAGCA...TTCAAGGCCTGGGACAGCTGTCCCTGCCCTTCTTCCCTGTTGTGGTCTGCCAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
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| CDS-3UTR GCA 90 bp | TACACAGCCTTCCACATAACCCTGGCAGACCACAACAGGGAAGAAGGGCAGGGACCATGGAGGCAGCCCTaGGGCGGGGTGCCTTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: YTAFHITLADHNREEGQGPWRQP*GGVPCH Trigger: GTGGCAAGGCACCCCGCCGCAGGGCTGCCTCCATGG...TCCCTGCCCTTCTTCCCTGTTGTGGTCTGCCAGGGTTATGTGGAAGGCTGTGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
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| CDS-3UTR CCA 90 bp | CTTTCACGCCCCTCCCAGGCCCCAAGCCAATTTCAGGACTTGGATGCTCTCTCTGCCCAGAGGGCTCCTTaGCGTGGCACCTTCCGGTGG | + |
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Preference number: 4 (lower is better) Translates to: LSRPSQAPSQFQDLDALSAQRAP*RGTFRW Trigger: CCACCGGAAGGTGCCACGCCAAGGAGCCCTCTGGGC...AGAGAGAGCATCCAAGTCCTGAAATTGGCTTGGGGCCTGGGAGGGGCGTGAAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
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| CDS-3UTR GCA 90 bp | CCTGGCAGACCACAACAGGGAAGAAGGGCAGGGACAGCTGTCCCAGGCCTTGAACCCGGAGCAGCTTGCTaGTGCTATCCATGGAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: PGRPQQGRRAGTAVPGLEPGAAC*CYPWRQ Trigger: CTGCCTCCATGGATAGCAGCAGCAAGCTGCTCCGGG...TTCAAGGCCTGGGACAGCTGTCCCTGCCCTTCTTCCCTGTTGTGGTCTGCCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
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| CDS-3UTR CCA 90 bp | GCTGGGGTGGAGGAGCCCCAGATGGCCTCTCTGGCAGGTGCTAGTAAACCTGATCCTTCTGTCCCAGACTaGGCTCCACCTCGGACGGTT | + |
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Preference number: 4 (lower is better) Translates to: AGVEEPQMASLAGASKPDPSVPD*APPRTV Trigger: AACCGTCCGAGGTGGAGCCCAGTCTGGGACAGAAGG...ATCAGGTTTACTAGCACCTGCCAGAGAGGCCATCTGGGGCTCCTCCACCCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
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| CDS-3UTR GCA 90 bp | CCTAAATCCTTCCTTCTTTCACGCCCCTCCCAGGCCCCAAGCCAATTTCAGGACGGCCCCGGAGCAGCTTaGTGCTGCTATCCATGGAGG | + |
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Preference number: 4 (lower is better) Translates to: PKSFLLSRPSQAPSQFQDGPGAA*CCYPWR Trigger: CCTCCATGGATAGCAGCAGCAAGCTGCTCCGGGGCC...GTCCTGAAATTGGCTTGGGGCCTGGGAGGGGCGTGAAAGAAGGAAGGATTTAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
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| CDS-3UTR CCA 90 bp | AGGCCCCAAGCCAATTTCAGGACTTGGATGCTCTCTCTGGGAGCACTAACCTGCCTCCGTAGCGAGGTCTaGTCGAGGAAGGGGCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: RPQANFRTWMLSLGALTCLRSEV*SRKGPG Trigger: ACCTGGCCCCTTCCTCGACCAGACCTCGCTACGGAG...GCAGGTTAGTGCTCCCAGAGAGAGCATCCAAGTCCTGAAATTGGCTTGGGGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
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| CDS-3UTR TCA 90 bp | GCTGGGGTGGAGGAGCCCCAGATGGCCTCTCTGGCAGGTGCTAGTAAACCTGATGTGGTGTATCAGAGGTaGGCAGAGCCTCTAGAGACT | + |
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Preference number: 4 (lower is better) Translates to: AGVEEPQMASLAGASKPDVVYQR*AEPLET Trigger: AGTCTCTAGAGGCTCTGCTCACCTCTGATACACCAC...ATCAGGTTTACTAGCACCTGCCAGAGAGGCCATCTGGGGCTCCTCCACCCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
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| CDS-3UTR GCA 90 bp | GCTGGGGTGGAGGAGCCCCAGATGGCCTCTCTGGCAGGTGCTAGTAAACCTGATATCTTCAGTAGGAGATaGGAGCACAGGGGTTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: AGVEEPQMASLAGASKPDIFSRR*EHRGSQ Trigger: CTGGGAACCCCTGTGCTCGCATCTCCTACTGAAGAT...ATCAGGTTTACTAGCACCTGCCAGAGAGGCCATCTGGGGCTCCTCCACCCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
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| CDS-3UTR CCA 90 bp | GCCAATTTCAGGACTTGGATGCTCTCTCTGGGAGCACTAACCTGCACTGGTCAACGTGGCACCTTCCGGTaGAGCTGGCAGGACAGACGG | + |
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Preference number: 4 (lower is better) Translates to: ANFRTWMLSLGALTCTGQRGTFR*SWQDRR Trigger: CCGTCTGTCCTGCCAGCTCCACCGGAAGGTGCCACG...TTGACCAGTGCAGGTTAGTGCTCCCAGAGAGAGCATCCAAGTCCTGAAATTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
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| CDS-3UTR TCA 90 bp | AGGCCCCAAGCCAATTTCAGGACTTGGATGCTCTCTCTGGGAGCACTAACCTGCAGGACAAGGGCTGCTTaGCCACTTGGCAAAGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: RPQANFRTWMLSLGALTCRTRAA*PLGKVA Trigger: GGCCACTTTGCCAAGTGGTCAAGCAGCCCTTGTCCT...GCAGGTTAGTGCTCCCAGAGAGAGCATCCAAGTCCTGAAATTGGCTTGGGGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
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| CDS-3UTR CCA 90 bp | ACCCTGGCAGACCACAACAGGGAAGAAGGGCAGGGACAGCTGTCCCAGGCCTTGTTCGTGGACGGAAAGTaGTCCACACATCAGCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: TLADHNREEGQGQLSQALFVDGK*STHQLL Trigger: AAGAAGCTGATGTGTGGACCACTTTCCGTCCACGAA...CAAGGCCTGGGACAGCTGTCCCTGCCCTTCTTCCCTGTTGTGGTCTGCCAGGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
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| CDS-3UTR CCA 90 bp | TTCCCAGACCCTCAGCCAAACTCGTCAGGCTCTCCCTTCCCTGTTCCTCTCCACTGCCATGACTGGGGGTaGTGCCATCACAGAAAGGTT | + |
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Preference number: 4 (lower is better) Translates to: FPDPQPNSSGSPFPVPLHCHDWG*CHHRKV Trigger: AACCTTTCTGTGATGGCACCACCCCCAGTCATGGCA...GTGGAGAGGAACAGGGAAGGGAGAGCCTGACGAGTTTGGCTGAGGGTCTGGGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
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| CDS-3UTR TCA 90 bp | TTCCCAGACCCTCAGCCAAACTCGTCAGGCTCTCCCTTCCCTGTTCCTCTCCACAGTTCTGCATATGACTaGTTTCCCCAGGCATTCCGG | + |
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Preference number: 4 (lower is better) Translates to: FPDPQPNSSGSPFPVPLHSSAYD*FPQAFR Trigger: CCGGAATGCCTGGGGAAATCAGTCATATGCAGAACT...GTGGAGAGGAACAGGGAAGGGAGAGCCTGACGAGTTTGGCTGAGGGTCTGGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
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| CDS-3UTR GCA 90 bp | CCTAAATCCTTCCTTCTTTCACGCCCCTCCCAGGCCCCAAGCCAATTTCAGGACCATGACTGGGGGTGGTaGCATCACAGAAAGGTTGGG | + |
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Preference number: 4 (lower is better) Translates to: PKSFLLSRPSQAPSQFQDHDWGW*HHRKVG Trigger: CCCAACCTTTCTGTGATGGCACCACCCCCAGTCATG...GTCCTGAAATTGGCTTGGGGCCTGGGAGGGGCGTGAAAGAAGGAAGGATTTAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
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| CDS-3UTR CCA 90 bp | CCTAAATCCTTCCTTCTTTCACGCCCCTCCCAGGCCCCAAGCCAATTTCAGGACTCGCGGCAGCCCCTGTaGCTGACTTCTTATTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: PKSFLLSRPSQAPSQFQDSRQPL*LTSYSL Trigger: CAGAGAATAAGAAGTCAGCCACAGGGGCTGCCGCGA...GTCCTGAAATTGGCTTGGGGCCTGGGAGGGGCGTGAAAGAAGGAAGGATTTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
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| CDS-3UTR CCA 90 bp | CCTGGCAGACCACAACAGGGAAGAAGGGCAGGGACAGCTGTCCCAGGCCTTGAAGCGCTTTCAATGGCCTaGCTGATGAGTTCTGCATAT | + |
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Preference number: 4 (lower is better) Translates to: PGRPQQGRRAGTAVPGLEALSMA*LMSSAY Trigger: ATATGCAGAACTCATCAGCCAGGCCATTGAAAGCGC...TTCAAGGCCTGGGACAGCTGTCCCTGCCCTTCTTCCCTGTTGTGGTCTGCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
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| CDS-3UTR CCA 90 bp | TCTGGGAGCACTAACCTGCACTGGTCAAATAAGAGTGTGCTTGCCCCACAACAGCCCCTGCATAGCTGCTaGCCGAGGCTGGCATTTCCT | + |
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Preference number: 4 (lower is better) Translates to: SGSTNLHWSNKSVLAPQQPLHSC*PRLAFP Trigger: AGGAAATGCCAGCCTCGGCCAGCAGCTATGCAGGGG...CTGTTGTGGGGCAAGCACACTCTTATTTGACCAGTGCAGGTTAGTGCTCCCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
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| CDS-3UTR TCA 90 bp | GCTGGGGTGGAGGAGCCCCAGATGGCCTCTCTGGCAGGTGCTAGTAAACCTGATGATGAGTTCTGCATATaGCTGATTTCCCCAGGCATT | + |
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Preference number: 4 (lower is better) Translates to: AGVEEPQMASLAGASKPDDEFCI*LISPGI Trigger: AATGCCTGGGGAAATCAGTCATATGCAGAACTCATC...ATCAGGTTTACTAGCACCTGCCAGAGAGGCCATCTGGGGCTCCTCCACCCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
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| CDS-3UTR TCA 90 bp | CCTAAATCCTTCCTTCTTTCACGCCCCTCCCAGGCCCCAAGCCAATTTCAGGACGACGGTGCTAGCATTTaGACTGCTTCGTGGACGGAA | + |
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Preference number: 4 (lower is better) Translates to: PKSFLLSRPSQAPSQFQDDGASI*TASWTE Trigger: TTCCGTCCACGAAGCAGTTCAAATGCTAGCACCGTC...GTCCTGAAATTGGCTTGGGGCCTGGGAGGGGCGTGAAAGAAGGAAGGATTTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
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| CDS-3UTR TCA 90 bp | AGGCCCCAAGCCAATTTCAGGACTTGGATGCTCTCTCTGGGAGCACTAACCTGCGCACCCTTCTCCTGCTaGCAAAGACCCATCTATTGG | + |
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Preference number: 4 (lower is better) Translates to: RPQANFRTWMLSLGALTCAPFSC*QRPIYW Trigger: CCAATAGATGGGTCTTTGTCAGCAGGAGAAGGGTGC...GCAGGTTAGTGCTCCCAGAGAGAGCATCCAAGTCCTGAAATTGGCTTGGGGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
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| CDS-3UTR TCA 90 bp | CAACACTTGAGTGTGTTGCCACCAATCCTTAGCTCTAAAGTAGGGTCCCAAACTTGGGAGCGCCTGCCATaGCTGGGGGTGGTGCCATCA | + |
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Preference number: 4 (lower is better) Translates to: QHLSVLPPILSSKVGSQTWERLP*LGVVPS Trigger: TGATGGCACCACCCCCAGTCATGGCAGGCGCTCCCA...AGTTTGGGACCCTACTTTAGAGCTAAGGATTGGTGGCAACACACTCAAGTGTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
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| CDS-3UTR CCA 90 bp | CTTTCACGCCCCTCCCAGGCCCCAAGCCAATTTCAGGACTTGGATGCTCTCTCTCTAGAGAGCAAGGAATaGGGAGATGCGAGATTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSRPSQAPSQFQDLDALSLESKE*GDARLS Trigger: GCTCAATCTCGCATCTCCCCATTCCTTGCTCTCTAG...AGAGAGAGCATCCAAGTCCTGAAATTGGCTTGGGGCCTGGGAGGGGCGTGAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
||
| CDS-3UTR TCA 90 bp | TCTGGGAGCACTAACCTGCACTGGTCAAATAAGAGTGTGCTTGCCCCACAACAGGGCAGCCCCTGTGGCTaGCTTCTTATTCTCTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: SGSTNLHWSNKSVLAPQQGSPCG*LLILWI Trigger: GATCCAGAGAATAAGAAGTCAGCCACAGGGGCTGCC...CTGTTGTGGGGCAAGCACACTCTTATTTGACCAGTGCAGGTTAGTGCTCCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
||
| CDS-3UTR TCA 90 bp | TACACAGCCTTCCACATAACCCTGGCAGACCACAACAGGGAAGAAGGGCAGGGATCAAGATCCAGATCCTaGGGCATTCTGTCATGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: YTAFHITLADHNREEGQGSRSRS*GILSWL Trigger: CAGCCATGACAGAATGCCTCAGGATCTGGATCTTGA...TCCCTGCCCTTCTTCCCTGTTGTGGTCTGCCAGGGTTATGTGGAAGGCTGTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
||
| CDS-3UTR GCA 90 bp | TTTCCCTCCCTCCTCCTATCACCCTCCTCTACAATCCCTACATGTCATAGATTTTCTTCTTGGGGCCTTTaGTGCGGCCCCGGAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FPSLLLSPSSTIPTCHRFSSWGL*CGPGAA Trigger: AGCTGCTCCGGGGCCGCAGCAAAGGCCCCAAGAAGA...AAATCTATGACATGTAGGGATTGTAGAGGAGGGTGATAGGAGGAGGGAGGGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
||
| CDS-3UTR CCA 90 bp | GAGGTCTCTGTACCTAACTTTACTACCCTAAATCCTTCCTTCTTTCACGCCCCTAGACTCCGGCCTCATTaGCGACAGCCGGGTGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: EVSVPNFTTLNPSFFHAPRLRPH*RQPGAD Trigger: GTCAGCACCCGGCTGTCGCCAATGAGGCCGGAGTCT...AGGGGCGTGAAAGAAGGAAGGATTTAGGGTAGTAAAGTTAGGTACAGAGACCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
||
| CDS-3UTR TCA 90 bp | CAAAGGCAGGGTAATAAGGCCACTGGTGACTTCACATTTCAACAGCATTGCTGGTGTCACCCTTGTCCTTaGAGTAGGGCACCGTGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: QRQGNKATGDFTFQQHCWCHPCP*SRAPCG Trigger: TCCGCACGGTGCCCTACTTCAAGGACAAGGGTGACA...CCAGCAATGCTGTTGAAATGTGAAGTCACCAGTGGCCTTATTACCCTGCCTTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
||
| CDS-3UTR CCA 90 bp | GCCAATTTCAGGACTTGGATGCTCTCTCTGGGAGCACTAACCTGCACTGGTCAACAAAGACCCATCTATTaGGCCAAAGAGGGAGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: ANFRTWMLSLGALTCTGQQRPIY*AKEGGT Trigger: GGTGCCTCCCTCTTTGGCCCAATAGATGGGTCTTTG...TTGACCAGTGCAGGTTAGTGCTCCCAGAGAGAGCATCCAAGTCCTGAAATTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
||
| CDS-3UTR CCA 90 bp | TCTGGGAGCACTAACCTGCACTGGTCAAATAAGAGTGTGCTTGCCCCACAACAGGACATCAGCAGGAGGTaGTGGTGTATCAGAGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SGSTNLHWSNKSVLAPQQDISRR*WCIRGE Trigger: CTCACCTCTGATACACCACCACCTCCTGCTGATGTC...CTGTTGTGGGGCAAGCACACTCTTATTTGACCAGTGCAGGTTAGTGCTCCCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
||
| CDS-3UTR GCA 90 bp | CTTAGCTCTAAAGTAGGGTCCCAAACTCCTGGGGAGGGCTCAAGGAGGAAAAGTTTCGAGGACAAGGGCTaGTTGACCACTTGGCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LSSKVGSQTPGEGSRRKSFEDKG*LTTWQS Trigger: ACTTTGCCAAGTGGTCAAGCAGCCCTTGTCCTCGAA...ACTTTTCCTCCTTGAGCCCTCCCCAGGAGTTTGGGACCCTACTTTAGAGCTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
||
| CDS-3UTR TCA 90 bp | CAAAGGCAGGGTAATAAGGCCACTGGTGACTTCACATTTCAACAGCATTGCTGGCCAGTGGCCTCGTTGTaGACCTTGATGAACTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QRQGNKATGDFTFQQHCWPVASL*TLMNLL Trigger: CAGCAAGTTCATCAAGGTTCACAACGAGGCCACTGG...CCAGCAATGCTGTTGAAATGTGAAGTCACCAGTGGCCTTATTACCCTGCCTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
||
| CDS-3UTR CCA 90 bp | CAAAGGCAGGGTAATAAGGCCACTGGTGACTTCACATTTCAACAGCATTGCTGGATCAGCAGGAGGTGGTaGTGTATCAGAGGTGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QRQGNKATGDFTFQQHCWISRRW*CIRGEQ Trigger: CTGCTCACCTCTGATACACCACCACCTCCTGCTGAT...CCAGCAATGCTGTTGAAATGTGAAGTCACCAGTGGCCTTATTACCCTGCCTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
||
| CDS-3UTR CCA 90 bp | CTTAGCTCTAAAGTAGGGTCCCAAACTCCTGGGGAGGGCTCAAGGAGGAAAAGTAGGATAGGATCTACCTaGGTCATGAGGACATCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSSKVGSQTPGEGSRRKSRIGST*VMRTSA Trigger: TGCTGATGTCCTCATGACCCAGGTAGATCCTATCCT...ACTTTTCCTCCTTGAGCCCTCCCCAGGAGTTTGGGACCCTACTTTAGAGCTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
||
| CDS-3UTR TCA 90 bp | TTTCCCTCCCTCCTCCTATCACCCTCCTCTACAATCCCTACATGTCATAGATTTGATCTGGCTCAAAGTTaGAGTCCAGTCCCTCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: FPSLLLSPSSTIPTCHRFDLAQS*SPVPHH Trigger: ATGGTGAGGGACTGGACTTCAACTTTGAGCCAGATC...AAATCTATGACATGTAGGGATTGTAGAGGAGGGTGATAGGAGGAGGGAGGGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
||
| CDS-3UTR GCA 90 bp | ATAGAGTCTGTAGTGTTTGTATCATGTCACTATGACAAAGCCTTCGGAAAGAAAGGAGCAGCTTGCTGCTaGTATCCATGGAGGCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: IESVVFVSCHYDKAFGKKGAACC*YPWRQP Trigger: GGGCTGCCTCCATGGATAGCAGCAGCAAGCTGCTCC...TTTCTTTCCGAAGGCTTTGTCATAGTGACATGATACAAACACTACAGACTCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
||
| CDS GCA 90 bp | CCGGTGGAGCTGGCAGGACAGACGGCTTCTTCTTGGGGCCTTTGCTaGGGCCCCGGAGCAGCTTGCTGCTGCTATCCATGGAGGCAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: PVELAGQTASSWGLC*GPGAACCCYPWRQP Trigger: GGGCTGCCTCCATGGATAGCAGCAGCAAGCTGCTCCGGGGCCGCAGCAAAGGCCCCAAGAAGAAGCCGTCTGTCCTGCCAGCTCCACCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062000.6 ENSMUST00000138437.3 |
||
| CDS CCA 90 bp | AAAGTGGCCCAGAGGGCTCCTTGGCGTGGCACCTTCCGGTGGAGCTaGCAGGACAGACGGCTTCTTCTTGGGGCCTTTGCTGCGGCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: KVAQRAPWRGTFRWS*QDRRLLLGAFAAAP Trigger: CGGGGCCGCAGCAAAGGCCCCAAGAAGAAGCCGTCTGTCCTGCCAGCTCCACCGGAAGGTGCCACGCCAAGGAGCCCTCTGGGCCACTTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062000.6 ENSMUST00000138437.3 |
||
| CDS CCA 90 bp | GGGTACCTTCTGTCCCAGACTGGGCTCCACCTCGGACGGTTCGTGTaGCTCCGTAGCGAGGTCTGGTCGAGGAAGGGGCCAGGTGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GYLLSQTGLHLGRFV*LRSEVWSRKGPGAG Trigger: TCCTGCACCTGGCCCCTTCCTCGACCAGACCTCGCTACGGAGCCACACGAACCGTCCGAGGTGGAGCCCAGTCTGGGACAGAAGGTACCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
||
| CDS GCA 90 bp | CTTCCGGTGGAGCTGGCAGGACAGACGGCTTCTTCTTGGGGCCTTTaGTGCGGCCCCGGAGCAGCTTGCTGCTGCTATCCATGGAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LPVELAGQTASSWGL*CGPGAACCCYPWRQ Trigger: CTGCCTCCATGGATAGCAGCAGCAAGCTGCTCCGGGGCCGCAGCAAAGGCCCCAAGAAGAAGCCGTCTGTCCTGCCAGCTCCACCGGAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062000.6 ENSMUST00000138437.3 |
||
| CDS CCA 90 bp | CTGGGAGCCGAGAGGGCAACAGGATCGGTTCGGAGTGTCCCTCCGTaGGTACCTTCTGTCCCAGACTGGGCTCCACCTCGGACGGTTCGT | + |
|
Preference number: 5 (lower is better) Translates to: LGAERATGSVRSVPP*VPSVPDWAPPRTVR Trigger: ACGAACCGTCCGAGGTGGAGCCCAGTCTGGGACAGAAGGTACCCACGGAGGGACACTCCGAACCGATCCTGTTGCCCTCTCGGCTCCCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
||
| CDS CCA 90 bp | CTTGGCAAAGTGGCCCAGAGGGCTCCTTGGCGTGGCACCTTCCGGTaGAGCTGGCAGGACAGACGGCTTCTTCTTGGGGCCTTTGCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: LGKVAQRAPWRGTFR*SWQDRRLLLGAFAA Trigger: CGCAGCAAAGGCCCCAAGAAGAAGCCGTCTGTCCTGCCAGCTCCACCGGAAGGTGCCACGCCAAGGAGCCCTCTGGGCCACTTTGCCAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062000.6 ENSMUST00000138437.3 |
||
| CDS CCA 90 bp | AATGGCCTTCTGTCCCAGACTGGGCTCCACCTCGGACGGTTCGTGTaGCTCCGTAGCGAGGTCTGGTCGAGGAAGGGGCCAGGTGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: NGLLSQTGLHLGRFV*LRSEVWSRKGPGAG Trigger: TCCTGCACCTGGCCCCTTCCTCGACCAGACCTCGCTACGGAGCCACACGAACCGTCCGAGGTGGAGCCCAGTCTGGGACAGAAGGCCATT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138437.3 |
||
| CDS GCA 90 bp | TCCCAGGACCTTAGGGATGGGAGCGCCTGCCATGACTGGGGGTGGTaGCATCACAGAAAGGTTGGGGACCAGGTTGCTGGGACCAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: SQDLRDGSACHDWGW*HHRKVGDQVAGTRT Trigger: GGTCCTGGTCCCAGCAACCTGGTCCCCAACCTTTCTGTGATGGCACCACCCCCAGTCATGGCAGGCGCTCCCATCCCTAAGGTCCTGGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062000.6 ENSMUST00000138437.3 |
||
| CDS CCA 90 bp | GGCTGCTTGACCACTTGGCAAAGTGGCCCAGAGGGCTCCTTGGCGTaGCACCTTCCGGTGGAGCTGGCAGGACAGACGGCTTCTTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: GCLTTWQSGPEGSLA*HLPVELAGQTASSW Trigger: CCAAGAAGAAGCCGTCTGTCCTGCCAGCTCCACCGGAAGGTGCCACGCCAAGGAGCCCTCTGGGCCACTTTGCCAAGTGGTCAAGCAGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062000.6 ENSMUST00000138437.3 |
||
| CDS CCA 90 bp | GGTTCCCAGGACCTTAGGGATGGGAGCGCCTGCCATGACTGGGGGTaGTGCCATCACAGAAAGGTTGGGGACCAGGTTGCTGGGACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GSQDLRDGSACHDWG*CHHRKVGDQVAGTR Trigger: CCTGGTCCCAGCAACCTGGTCCCCAACCTTTCTGTGATGGCACCACCCCCAGTCATGGCAGGCGCTCCCATCCCTAAGGTCCTGGGAACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062000.6 ENSMUST00000138437.3 |
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| CDS-3UTR CAA 90 bp | ACCCTGGCAGACCACAACAGGGAAGAAGGGCAGGGACAGCTGTCCCAGGCCTTGGGGCTGCTTGACCACTaGGCAAAGTGGCCCAGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: TLADHNREEGQGQLSQALGLLDH*AKWPRG Trigger: CCCTCTGGGCCACTTTGCCAAGTGGTCAAGCAGCCC...CAAGGCCTGGGACAGCTGTCCCTGCCCTTCTTCCCTGTTGTGGTCTGCCAGGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
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| CDS CCA 90 bp | TCTTCTCGATTTCGAGGACAAGGGCTGCTTGACCACTTGGCAAAGTaGCCCAGAGGGCTCCTTGGCGTGGCACCTTCCGGTGGAGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SSRFRGQGLLDHLAK*PRGLLGVAPSGGAG Trigger: GCCAGCTCCACCGGAAGGTGCCACGCCAAGGAGCCCTCTGGGCCACTTTGCCAAGTGGTCAAGCAGCCCTTGTCCTCGAAATCGAGAAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062000.6 ENSMUST00000138437.3 |
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| CDS-3UTR CAA 90 bp | CCTTCTTTCACGCCCCTCCCAGGCCCCAAGCCAATTTCAGGACTTGGATGCTCTCGGCCCCGGAGCAGCTaGCTGCTGCTATCCATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PSFTPLPGPKPISGLGCSRPRSS*LLLSME Trigger: CTCCATGGATAGCAGCAGCAAGCTGCTCCGGGGCCG...AGAGCATCCAAGTCCTGAAATTGGCTTGGGGCCTGGGAGGGGCGTGAAAGAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
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| CDS-3UTR CAA 90 bp | CTTAGCTCTAAAGTAGGGTCCCAAACTCCTGGGGAGGGCTCAAGGAGGAAAAGTGGCCCAGAGGGCTCCTaGGCGTGGCACCTTCCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LSSKVGSQTPGEGSRRKSGPEGS*AWHLPV Trigger: CACCGGAAGGTGCCACGCCAAGGAGCCCTCTGGGCC...ACTTTTCCTCCTTGAGCCCTCCCCAGGAGTTTGGGACCCTACTTTAGAGCTAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
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| CDS TCA 90 bp | GGTCCACACATCAGCTTCTTCTCGATTTCGAGGACAAGGGCTGCTTaGCCACTTGGCAAAGTGGCCCAGAGGGCTCCTTGGCGTGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: GPHISFFSISRTRAA*PLGKVAQRAPWRGT Trigger: GGTGCCACGCCAAGGAGCCCTCTGGGCCACTTTGCCAAGTGGTCAAGCAGCCCTTGTCCTCGAAATCGAGAAGAAGCTGATGTGTGGACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062000.6 ENSMUST00000138437.3 |
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| CDS CCA 90 bp | CATCAGCTTCTTCTCGATTTCGAGGACAAGGGCTGCTTGACCACTTaGCAAAGTGGCCCAGAGGGCTCCTTGGCGTGGCACCTTCCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: HQLLLDFEDKGCLTT*QSGPEGSLAWHLPV Trigger: CACCGGAAGGTGCCACGCCAAGGAGCCCTCTGGGCCACTTTGCCAAGTGGTCAAGCAGCCCTTGTCCTCGAAATCGAGAAGAAGCTGATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062000.6 ENSMUST00000138437.3 |
||
| CDS-3UTR CAA 90 bp | ACCCTGGCAGACCACAACAGGGAAGAAGGGCAGGGACAGCTGTCCCAGGCCTTGCTAGAGACTGGGAACTaGAGAAGCACCCTTCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: TLADHNREEGQGQLSQALLETGN*RSTLLL Trigger: CAGGAGAAGGGTGCTTCTCAAGTTCCCAGTCTCTAG...CAAGGCCTGGGACAGCTGTCCCTGCCCTTCTTCCCTGTTGTGGTCTGCCAGGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
||
| CDS TCA 90 bp | CTCCGGCCTCATTGGCGACAGCCGGGTGCTGACGGTGCTAGCATTTaGACTGCTTCGTGGACGGAAAGTGGTCCACACATCAGCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LRPHWRQPGADGASI*TASWTESGPHISFF Trigger: GAAGAAGCTGATGTGTGGACCACTTTCCGTCCACGAAGCAGTTCAAATGCTAGCACCGTCAGCACCCGGCTGTCGCCAATGAGGCCGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062000.6 ENSMUST00000138437.3 |
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| CDS GCA 90 bp | CAGATCCTGAGGCATTCTGTCATGGCTGGAATCTTCAGTAGGAGATaGGAGCACAGGGGTTCCCAGGACCTTAGGGATGGGAGCGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QILRHSVMAGIFSRR*EHRGSQDLRDGSAC Trigger: GCAGGCGCTCCCATCCCTAAGGTCCTGGGAACCCCTGTGCTCGCATCTCCTACTGAAGATTCCAGCCATGACAGAATGCCTCAGGATCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062000.6 ENSMUST00000138437.3 |
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| CDS-3UTR CAA 90 bp | CCTTCTTTCACGCCCCTCCCAGGCCCCAAGCCAATTTCAGGACTTGGATGCTCTGAGGACAAGGGCTGCTaGACCACTTGGCAAAGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PSFTPLPGPKPISGLGCSEDKGC*TTWQSG Trigger: GCCACTTTGCCAAGTGGTCAAGCAGCCCTTGTCCTC...AGAGCATCCAAGTCCTGAAATTGGCTTGGGGCCTGGGAGGGGCGTGAAAGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
||
| CDS GCA 90 bp | AAGTGGTCCACACATCAGCTTCTTCTCGATTTCGAGGACAAGGGCTaGTTGACCACTTGGCAAAGTGGCCCAGAGGGCTCCTTGGCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: KWSTHQLLLDFEDKG*LTTWQSGPEGSLAW Trigger: CCACGCCAAGGAGCCCTCTGGGCCACTTTGCCAAGTGGTCAAGCAGCCCTTGTCCTCGAAATCGAGAAGAAGCTGATGTGTGGACCACTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062000.6 ENSMUST00000138437.3 |
||
| CDS-3UTR CAA 90 bp | GAGGTCTCTGTACCTAACTTTACTACCCTAAATCCTTCCTTCTTTCACGCCCCTTTCTTCTTGGGGCCTTaGCTGCGGCCCCGGAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: EVSVPNFTTLNPSFFHAPFFLGP*LRPRSS Trigger: GCTGCTCCGGGGCCGCAGCAAAGGCCCCAAGAAGAA...AGGGGCGTGAAAGAAGGAAGGATTTAGGGTAGTAAAGTTAGGTACAGAGACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
||
| CDS-3UTR CAA 90 bp | CAAAGGCAGGGTAATAAGGCCACTGGTGACTTCACATTTCAACAGCATTGCTGGACAGACGGCTTCTTCTaGGGGCCTTTGCTGCGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: QRQGNKATGDFTFQQHCWTDGFF*GPLLRP Trigger: GGGCCGCAGCAAAGGCCCCAAGAAGAAGCCGTCTGT...CCAGCAATGCTGTTGAAATGTGAAGTCACCAGTGGCCTTATTACCCTGCCTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
||
| CDS-3UTR CAA 90 bp | CAAAGGCAGGGTAATAAGGCCACTGGTGACTTCACATTTCAACAGCATTGCTGGAGGTTGGGGACCAGGTaGCTGGGACCAGGACCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: QRQGNKATGDFTFQQHCWRLGTR*LGPGPS Trigger: AGAGGGTCCTGGTCCCAGCAACCTGGTCCCCAACCT...CCAGCAATGCTGTTGAAATGTGAAGTCACCAGTGGCCTTATTACCCTGCCTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
||
| CDS CCA 90 bp | TGCTGCAAAGAGAAGCCGGAGAGACCGCTCCTAGAGAGCAAGGAATaGGGAGATGCGAGATTGAGCCCATCCAGTAGCTCTAGATCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: CCKEKPERPLLESKE*GDARLSPSSSSRSS Trigger: TGAAGATCTAGAGCTACTGGATGGGCTCAATCTCGCATCTCCCCATTCCTTGCTCTCTAGGAGCGGTCTCTCCGGCTTCTCTTTGCAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062000.6 ENSMUST00000138437.3 |
||
| CDS-3UTR CAA 90 bp | CTTAGCTCTAAAGTAGGGTCCCAAACTCCTGGGGAGGGCTCAAGGAGGAAAAGTACAAAGACCCATCTATaGGGCCAAAGAGGGAGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LSSKVGSQTPGEGSRRKSTKTHL*GQRGRH Trigger: GTGCCTCCCTCTTTGGCCCAATAGATGGGTCTTTGT...ACTTTTCCTCCTTGAGCCCTCCCCAGGAGTTTGGGACCCTACTTTAGAGCTAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
||
| CDS TCA 90 bp | TTGCTAGAGGAAGGCATTCCTCCCAGTAACAGAAGTGTAGGAGCCTaGGACAGGATAGGATCTACCTGGGTCATGAGGACATCAGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LLEEGIPPSNRSVGA*DRIGSTWVMRTSAG Trigger: TCCTGCTGATGTCCTCATGACCCAGGTAGATCCTATCCTGTCTCAGGCTCCTACACTTCTGTTACTGGGAGGAATGCCTTCCTCTAGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062000.6 ENSMUST00000138437.3 |
||
| CDS TCA 90 bp | ATGTCGCACTCCAGGTTCTCCATATACATATCAAGATCCAGATCCTaGGGCATTCTGTCATGGCTGGAATCTTCAGTAGGAGATGCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: MSHSRFSIYISRSRS*GILSWLESSVGDAS Trigger: GCTCGCATCTCCTACTGAAGATTCCAGCCATGACAGAATGCCTCAGGATCTGGATCTTGATATGTATATGGAGAACCTGGAGTGCGACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062000.6 ENSMUST00000138437.3 |
||
| CDS CCA 72 bp | CACCTCGGACGGTTCGTGTGGCTCCGTAGCGAGGTCTaGTCGAGGAAGGGGCCAGGTGCAGGATCGCGGACG | + |
|
Preference number: 6 (lower is better) Translates to: HLGRFVWLRSEV*SRKGPGAGSRT Trigger: CGTCCGCGATCCTGCACCTGGCCCCTTCCTCGACCAGACCTCGCTACGGAGCCACACGAACCGTCCGAGGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062000.6 ENSMUST00000138437.3 |
||
| CDS CCA 72 bp | GTGGCCCAGAGGGCTCCTTGGCGTGGCACCTTCCGGTaGAGCTGGCAGGACAGACGGCTTCTTCTTGGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: VAQRAPWRGTFR*SWQDRRLLLGA Trigger: GGCCCCAAGAAGAAGCCGTCTGTCCTGCCAGCTCCACCGGAAGGTGCCACGCCAAGGAGCCCTCTGGGCCAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062000.6 ENSMUST00000138437.3 |
||
| CDS CCA 72 bp | CTGTCCCAGACTGGGCTCCACCTCGGACGGTTCGTGTaGCTCCGTAGCGAGGTCTGGTCGAGGAAGGGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: LSQTGLHLGRFV*LRSEVWSRKGP Trigger: TGGCCCCTTCCTCGACCAGACCTCGCTACGGAGCCACACGAACCGTCCGAGGTGGAGCCCAGTCTGGGACAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062000.6 ENSMUST00000138437.3 |
||
| CDS CAA 72 bp | CCTTCCGGTGGAGCTGGCAGGACAGACGGCTTCTTCTaGGGGCCTTTGCTGCGGCCCCGGAGCAGCTTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PSGGAGRTDGFF*GPLLRPRSSLL Trigger: CAGCAAGCTGCTCCGGGGCCGCAGCAAAGGCCCCAAGAAGAAGCCGTCTGTCCTGCCAGCTCCACCGGAAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062000.6 ENSMUST00000138437.3 |
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| CDS CAA 90 bp | CCTTCCGGTGGAGCTGGCAGGACAGACGGCTTCTTCTTGGGGCCTTaGCTGCGGCCCCGGAGCAGCTTGCTGCTGCTATCCATGGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: PSGGAGRTDGFFLGP*LRPRSSLLLLSMEA Trigger: TGCCTCCATGGATAGCAGCAGCAAGCTGCTCCGGGGCCGCAGCAAAGGCCCCAAGAAGAAGCCGTCTGTCCTGCCAGCTCCACCGGAAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062000.6 ENSMUST00000138437.3 |
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| CDS GCA 72 bp | CTGGCAGGACAGACGGCTTCTTCTTGGGGCCTTTGCTaGGGCCCCGGAGCAGCTTGCTGCTGCTATCCATGG | + |
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Preference number: 6 (lower is better) Translates to: LAGQTASSWGLC*GPGAACCCYPW Trigger: CCATGGATAGCAGCAGCAAGCTGCTCCGGGGCCGCAGCAAAGGCCCCAAGAAGAAGCCGTCTGTCCTGCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062000.6 ENSMUST00000138437.3 |
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| CDS GCA 72 bp | GAGCTGGCAGGACAGACGGCTTCTTCTTGGGGCCTTTaGTGCGGCCCCGGAGCAGCTTGCTGCTGCTATCCA | + |
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Preference number: 6 (lower is better) Translates to: ELAGQTASSWGL*CGPGAACCCYP Trigger: TGGATAGCAGCAGCAAGCTGCTCCGGGGCCGCAGCAAAGGCCCCAAGAAGAAGCCGTCTGTCCTGCCAGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062000.6 ENSMUST00000138437.3 |
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| CDS CCA 72 bp | GAGAGGGCAACAGGATCGGTTCGGAGTGTCCCTCCGTaGGTACCTTCTGTCCCAGACTGGGCTCCACCTCGG | + |
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Preference number: 6 (lower is better) Translates to: ERATGSVRSVPP*VPSVPDWAPPR Trigger: CCGAGGTGGAGCCCAGTCTGGGACAGAAGGTACCCACGGAGGGACACTCCGAACCGATCCTGTTGCCCTCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062000.6 |
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| CDS CCA 72 bp | CAGAGGGCTCCTTGGCGTGGCACCTTCCGGTGGAGCTaGCAGGACAGACGGCTTCTTCTTGGGGCCTTTGCT | + |
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Preference number: 6 (lower is better) Translates to: QRAPWRGTFRWS*QDRRLLLGAFA Trigger: AGCAAAGGCCCCAAGAAGAAGCCGTCTGTCCTGCCAGCTCCACCGGAAGGTGCCACGCCAAGGAGCCCTCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062000.6 ENSMUST00000138437.3 |
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| CDS CAA 90 bp | GACAAGGGCTGCTTGACCACTTGGCAAAGTGGCCCAGAGGGCTCCTaGGCGTGGCACCTTCCGGTGGAGCTGGCAGGACAGACGGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: DKGCLTTWQSGPEGS*AWHLPVELAGQTAS Trigger: AGAAGCCGTCTGTCCTGCCAGCTCCACCGGAAGGTGCCACGCCAAGGAGCCCTCTGGGCCACTTTGCCAAGTGGTCAAGCAGCCCTTGTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062000.6 ENSMUST00000138437.3 |
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| CDS CCA 72 bp | CTTCTCGATTTCGAGGACAAGGGCTGCTTGACCACTTaGCAAAGTGGCCCAGAGGGCTCCTTGGCGTGGCAC | + |
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Preference number: 6 (lower is better) Translates to: LLDFEDKGCLTT*QSGPEGSLAWH Trigger: GTGCCACGCCAAGGAGCCCTCTGGGCCACTTTGCCAAGTGGTCAAGCAGCCCTTGTCCTCGAAATCGAGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062000.6 ENSMUST00000138437.3 |
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| CDS CAA 90 bp | ACATCAGCTTCTTCTCGATTTCGAGGACAAGGGCTGCTTGACCACTaGGCAAAGTGGCCCAGAGGGCTCCTTGGCGTGGCACCTTCCGGT | + |
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Preference number: 6 (lower is better) Translates to: TSASSRFRGQGLLDH*AKWPRGLLGVAPSG Trigger: ACCGGAAGGTGCCACGCCAAGGAGCCCTCTGGGCCACTTTGCCAAGTGGTCAAGCAGCCCTTGTCCTCGAAATCGAGAAGAAGCTGATGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062000.6 ENSMUST00000138437.3 |
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| CDS CAA 90 bp | TGGTCCACACATCAGCTTCTTCTCGATTTCGAGGACAAGGGCTGCTaGACCACTTGGCAAAGTGGCCCAGAGGGCTCCTTGGCGTGGCAC | + |
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Preference number: 6 (lower is better) Translates to: WSTHQLLLDFEDKGC*TTWQSGPEGSLAWH Trigger: GTGCCACGCCAAGGAGCCCTCTGGGCCACTTTGCCAAGTGGTCAAGCAGCCCTTGTCCTCGAAATCGAGAAGAAGCTGATGTGTGGACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062000.6 ENSMUST00000138437.3 |
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| CDS CAA 72 bp | TCTTCTCGATTTCGAGGACAAGGGCTGCTTGACCACTaGGCAAAGTGGCCCAGAGGGCTCCTTGGCGTGGCA | + |
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Preference number: 6 (lower is better) Translates to: SSRFRGQGLLDH*AKWPRGLLGVA Trigger: TGCCACGCCAAGGAGCCCTCTGGGCCACTTTGCCAAGTGGTCAAGCAGCCCTTGTCCTCGAAATCGAGAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062000.6 ENSMUST00000138437.3 |
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| CDS TCA 72 bp | CATTGGCGACAGCCGGGTGCTGACGGTGCTAGCATTTaGACTGCTTCGTGGACGGAAAGTGGTCCACACATC | + |
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Preference number: 6 (lower is better) Translates to: HWRQPGADGASI*TASWTESGPHI Trigger: GATGTGTGGACCACTTTCCGTCCACGAAGCAGTTCAAATGCTAGCACCGTCAGCACCCGGCTGTCGCCAATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062000.6 ENSMUST00000138437.3 |
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| CDS CCA 72 bp | GAGAAGCCGGAGAGACCGCTCCTAGAGAGCAAGGAATaGGGAGATGCGAGATTGAGCCCATCCAGTAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: EKPERPLLESKE*GDARLSPSSSS Trigger: AGAGCTACTGGATGGGCTCAATCTCGCATCTCCCCATTCCTTGCTCTCTAGGAGCGGTCTCTCCGGCTTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062000.6 ENSMUST00000138437.3 |
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| CDS CAA 72 bp | AGCGGCGTAGGACACAGGCTGACTCCTGTGCCCAGCTaGCTAGAGGAAGGCATTCCTCCCAGTAACAGAAGT | + |
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Preference number: 6 (lower is better) Translates to: SGVGHRLTPVPS*LEEGIPPSNRS Trigger: ACTTCTGTTACTGGGAGGAATGCCTTCCTCTAGCAAGCTGGGCACAGGAGTCAGCCTGTGTCCTACGCCGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062000.6 ENSMUST00000138437.3 |
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| CDS TCA 72 bp | ATCAGCTTCTTCTCGATTTCGAGGACAAGGGCTGCTTaGCCACTTGGCAAAGTGGCCCAGAGGGCTCCTTGG | + |
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Preference number: 6 (lower is better) Translates to: ISFFSISRTRAA*PLGKVAQRAPW Trigger: CCAAGGAGCCCTCTGGGCCACTTTGCCAAGTGGTCAAGCAGCCCTTGTCCTCGAAATCGAGAAGAAGCTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062000.6 ENSMUST00000138437.3 |
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| CDS GCA 72 bp | ACACATCAGCTTCTTCTCGATTTCGAGGACAAGGGCTaGTTGACCACTTGGCAAAGTGGCCCAGAGGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: THQLLLDFEDKG*LTTWQSGPEGS Trigger: GGAGCCCTCTGGGCCACTTTGCCAAGTGGTCAAGCAGCCCTTGTCCTCGAAATCGAGAAGAAGCTGATGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062000.6 ENSMUST00000138437.3 |
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| CDS CAA 72 bp | CATCAGCTTCTTCTCGATTTCGAGGACAAGGGCTGCTaGACCACTTGGCAAAGTGGCCCAGAGGGCTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: HQLLLDFEDKGC*TTWQSGPEGSL Trigger: CAAGGAGCCCTCTGGGCCACTTTGCCAAGTGGTCAAGCAGCCCTTGTCCTCGAAATCGAGAAGAAGCTGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062000.6 ENSMUST00000138437.3 |
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| CDS CAA 90 bp | GGGAACTTGAGAAGCACCCTTCTCCTGCTGACAAAGACCCATCTATaGGGCCAAAGAGGGAGGCACCATAGCTATGTAAGGGGCCAGCAA | + |
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Preference number: 6 (lower is better) Translates to: GNLRSTLLLLTKTHL*GQRGRHHSYVRGQQ Trigger: TTGCTGGCCCCTTACATAGCTATGGTGCCTCCCTCTTTGGCCCAATAGATGGGTCTTTGTCAGCAGGAGAAGGGTGCTTCTCAAGTTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062000.6 ENSMUST00000138437.3 |
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| CDS TCA 72 bp | GAAGGCATTCCTCCCAGTAACAGAAGTGTAGGAGCCTaGGACAGGATAGGATCTACCTGGGTCATGAGGACA | + |
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Preference number: 6 (lower is better) Translates to: EGIPPSNRSVGA*DRIGSTWVMRT Trigger: TGTCCTCATGACCCAGGTAGATCCTATCCTGTCTCAGGCTCCTACACTTCTGTTACTGGGAGGAATGCCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062000.6 ENSMUST00000138437.3 |
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| CDS TCA 72 bp | TCCAGGTTCTCCATATACATATCAAGATCCAGATCCTaGGGCATTCTGTCATGGCTGGAATCTTCAGTAGGA | + |
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Preference number: 6 (lower is better) Translates to: SRFSIYISRSRS*GILSWLESSVG Trigger: TCCTACTGAAGATTCCAGCCATGACAGAATGCCTCAGGATCTGGATCTTGATATGTATATGGAGAACCTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062000.6 ENSMUST00000138437.3 |
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