Pregenerated sensors for FOXO3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048756Ensembl transcript IDs: ENSMUST00000056974.4, ENSMUST00000105501.2, ENSMUST00000105502.8, ENSMUST00000175881.8
Found 143 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGTCATGTTTGGAGAGAGCTAGAGCCCTTCCAGATGCAACAGGGCTaGCGTGAGGACAGCAGACACGCCCGTGCTTGGCTGTTCCGTTCT | + |
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Preference number: 1 (lower is better) Translates to: SHVWRELEPFQMQQG*REDSRHARAWLFRS Trigger: AGAACGGAACAGCCAAGCACGGGCGTGTCTGCTGTCCTCACGGCAGCCCTGTTGCATCTGGAAGGGCTCTAGCTCTCTCCAAACATGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105501.2 |
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| 3UTR TCA 90 bp | CTCAGGGCCCTCATGTTGGAAGCACTTGGGGTTCTCCCTTGTACCTaGGCTTTCTCTGTTCCTTCAGCTGCCACCCTGAGACATTCCACC | + |
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Preference number: 1 (lower is better) Translates to: LRALMLEALGVLPCT*AFSVPSAATLRHST Trigger: GGTGGAATGTCTCAGGGTGGCAGCTGAAGGAACAGAGAAAGCTCAGGTACAAGGGAGAACCCCAAGTGCTTCCAACATGAGGGCCCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
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| 3UTR CCA 90 bp | CTGGCTCTACAAAACTTGGCTATAGACAATCCCACAGCACTGGGCTaGCAGCAGTCATGTTTGGAGAGAGCTAGAGCCCTTCCAGATGCA | + |
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Preference number: 1 (lower is better) Translates to: LALQNLAIDNPTALG*QQSCLERARALPDA Trigger: TGCATCTGGAAGGGCTCTAGCTCTCTCCAAACATGACTGCTGCCAGCCCAGTGCTGTGGGATTGTCTATAGCCAAGTTTTGTAGAGCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105501.2 |
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| 3UTR TCA 90 bp | TCAGATGTCTCAACAGACCGGTTCCTTGTTAGGGACCTAAGACACTaGGAATGCTACTTGGTGGCCAATGGCCAAGCTACCCTGAAAGCA | + |
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Preference number: 1 (lower is better) Translates to: SDVSTDRFLVRDLRH*ECYLVANGQATLKA Trigger: TGCTTTCAGGGTAGCTTGGCCATTGGCCACCAAGTAGCATTCTCAGTGTCTTAGGTCCCTAACAAGGAACCGGTCTGTTGAGACATCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
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| 3UTR TCA 90 bp | CAGTGGATGGAGCGCTTCAAGAAAAGGCAGAGTTGTCTGTCCCTATaGACCTGTACATGGGTTCAGAAGTTGGCTGAAGTCACACCTGAG | + |
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Preference number: 1 (lower is better) Translates to: QWMERFKKRQSCLSL*TCTWVQKLAEVTPE Trigger: CTCAGGTGTGACTTCAGCCAACTTCTGAACCCATGTACAGGTTCATAGGGACAGACAACTCTGCCTTTTCTTGAAGCGCTCCATCCACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
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| 3UTR CCA 90 bp | TTAAACTCAACAGAGAATGCTCAGGGCCCTCATGTTGGAAGCACTTaGGGTTCTCCCTTGTACCTGAGCTTTCTCTGTTCCTTCAGCTGC | + |
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Preference number: 1 (lower is better) Translates to: LNSTENAQGPHVGST*GSPLYLSFLCSFSC Trigger: GCAGCTGAAGGAACAGAGAAAGCTCAGGTACAAGGGAGAACCCCAAGTGCTTCCAACATGAGGGCCCTGAGCATTCTCTGTTGAGTTTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
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| 3UTR CCA 90 bp | GTTGAAAAGAATCAAAAGATATGCACGTTTCACAAACAGTGCCGTTaGACCAGCTGGTGCAGACGTGGTTTGTCGCTCTCACACGCATGC | + |
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Preference number: 1 (lower is better) Translates to: VEKNQKICTFHKQCR*TSWCRRGLSLSHAC Trigger: GCATGCGTGTGAGAGCGACAAACCACGTCTGCACCAGCTGGTCCAACGGCACTGTTTGTGAAACGTGCATATCTTTTGATTCTTTTCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
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| 3UTR TCA 90 bp | TCCACTCCCAGTGCCTGTAAACTGCAGAGCCAAGACATTATCTTGTaGGCTGGTCTGCGTTTCTTTAAACTCAACAGAGAATGCTCAGGG | + |
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Preference number: 1 (lower is better) Translates to: STPSACKLQSQDIIL*AGLRFFKLNRECSG Trigger: CCCTGAGCATTCTCTGTTGAGTTTAAAGAAACGCAGACCAGCTCACAAGATAATGTCTTGGCTCTGCAGTTTACAGGCACTGGGAGTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
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| 3UTR GCA 90 bp | AGCAAGGTTGAAAAGAATCAAAAGATATGCACGTTTCACAAACAGTaGCGTTGGACCAGCTGGTGCAGACGTGGTTTGTCGCTCTCACAC | + |
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Preference number: 1 (lower is better) Translates to: SKVEKNQKICTFHKQ*RWTSWCRRGLSLSH Trigger: GTGTGAGAGCGACAAACCACGTCTGCACCAGCTGGTCCAACGGCACTGTTTGTGAAACGTGCATATCTTTTGATTCTTTTCAACCTTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
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| 3UTR GCA 90 bp | GGAGACGTAGGAAAACAGTTCTATGTGCTTCAGCCGTCATTATGTTaGAGAGGATACAATGGAGAACACACCTCTAATGCAGTCACAGTT | + |
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Preference number: 1 (lower is better) Translates to: GDVGKQFYVLQPSLC*RGYNGEHTSNAVTV Trigger: AACTGTGACTGCATTAGAGGTGTGTTCTCCATTGTATCCTCTGCAACATAATGACGGCTGAAGCACATAGAACTGTTTTCCTACGTCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
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| 3UTR TCA 90 bp | AACAAGAGAAAATACTTCATCCATCTAATCTGTATGCTATACACTTaGGATTTAGTTCAAACACCACTTATTCCTGTCAGTTGCTTGGGC | + |
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Preference number: 1 (lower is better) Translates to: NKRKYFIHLICMLYT*DLVQTPLIPVSCLG Trigger: GCCCAAGCAACTGACAGGAATAAGTGGTGTTTGAACTAAATCTCAAGTGTATAGCATACAGATTAGATGGATGAAGTATTTTCTCTTGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
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| 3UTR-3UTR TCA 90 bp | AAGTCTGGAAGGTCCACAAGGTCACCTGCTCAGATGTCTCAACAGACCGGTTCCCGTCCAAGTCTCGCCTaGGCCTCTCCAGGGCCCGGC | + |
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Preference number: 2 (lower is better) Translates to: KSGRSTRSPAQMSQQTGSRPSLA*ASPGPG Trigger: GCCGGGCCCTGGAGAGGCTCAGGCGAGACTTGGACG...GGAACCGGTCTGTTGAGACATCTGAGCAGGTGACCTTGTGGACCTTCCAGACTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
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| 3UTR-3UTR CCA 90 bp | CTCTGCCTCTGCTCTCCCACTCTGCCGAGGCGACTCTTGTCTCACCCTGTTCCCGTGGCACGCCTGGGTTaGTGTTCACAGCTACAGTGC | + |
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Preference number: 2 (lower is better) Translates to: LCLCSPTLPRRLLSHPVPVARLG*CSQLQC Trigger: GCACTGTAGCTGTGAACACCAACCCAGGCGTGCCAC...GGGAACAGGGTGAGACAAGAGTCGCCTCGGCAGAGTGGGAGAGCAGAGGCAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
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| 3UTR CAA 90 bp | CCCGACTCAGAACTGGAAACTACTGGGTCAGATGCCTGGCTCTGTTaGCTTCGCCTACGCATAGTTCGGTCCTGGTCGGGCACGCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: PDSELETTGSDAWLC*LRLRIVRSWSGTQG Trigger: GCCCTGCGTGCCCGACCAGGACCGAACTATGCGTAGGCGAAGCAAACAGAGCCAGGCATCTGACCCAGTAGTTTCCAGTTCTGAGTCGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
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| 3UTR-3UTR TCA 90 bp | GAGTCTGAGGGTGGGAGTGCAAATACCCCAGTAGGCATTGCCGTCCAAGTCTCGCTTCAGCTGCCACCCTaGGACATTCCACCCAGGGTG | + |
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Preference number: 2 (lower is better) Translates to: ESEGGSANTPVGIAVQVSLQLPP*DIPPRV Trigger: CACCCTGGGTGGAATGTCTCAGGGTGGCAGCTGAAG...CGAGACTTGGACGGCAATGCCTACTGGGGTATTTGCACTCCCACCCTCAGACTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
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| 3UTR-3UTR GCA 90 bp | GAGTCTGAGGGTGGGAGTGCAAATACCCCAGTAGGCATTGCCGTCCAAGTCTCGTTGGGAAAGGCAACGTaGCACAGGCCTAGCAGGACC | + |
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Preference number: 2 (lower is better) Translates to: ESEGGSANTPVGIAVQVSLGKAT*HRPSRT Trigger: GGTCCTGCTAGGCCTGTGGCACGTTGCCTTTCCCAA...CGAGACTTGGACGGCAATGCCTACTGGGGTATTTGCACTCCCACCCTCAGACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
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| 3UTR-3UTR TCA 90 bp | TCTGGGAAGCCAGAAAGCCAGTTAGTCCTCCACCAAAATGACACAGTTGCGGGGGGGCAGAGGCTGAGCTaGTGCTTTCCTGAAGAGGCC | + |
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Preference number: 2 (lower is better) Translates to: SGKPESQLVLHQNDTVAGGQRLS*CFPEEA Trigger: GGCCTCTTCAGGAAAGCATCAGCTCAGCCTCTGCCC...CCCCGCAACTGTGTCATTTTGGTGGAGGACTAACTGGCTTTCTGGCTTCCCAGA 57% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
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| 3UTR-3UTR GCA 90 bp | CTCTGCCTCTGCTCTCCCACTCTGCCGAGGCGACTCTTGTCTCACCCTGTTCCCAAACTCAACAGAGAATaGTCAGGGCCCTCATGTTGG | + |
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Preference number: 2 (lower is better) Translates to: LCLCSPTLPRRLLSHPVPKLNRE*SGPSCW Trigger: CCAACATGAGGGCCCTGAGCATTCTCTGTTGAGTTT...GGGAACAGGGTGAGACAAGAGTCGCCTCGGCAGAGTGGGAGAGCAGAGGCAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
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| 3UTR-3UTR GCA 90 bp | ACTGTGCTAGGGGCTGTGATGGCCATCTTCACCACCCCCAGAGTGCTCAGGAAGAACTACTGGGTCAGATaGCTGGCTCTGTTTGCTTCG | + |
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Preference number: 2 (lower is better) Translates to: TVLGAVMAIFTTPRVLRKNYWVR*LALFAS Trigger: CGAAGCAAACAGAGCCAGGCATCTGACCCAGTAGTT...CTTCCTGAGCACTCTGGGGGTGGTGAAGATGGCCATCACAGCCCCTAGCACAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
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| 3UTR-3UTR GCA 90 bp | GGGAGGGAAGGCTTGTTTTCTCCCCGCCTTACTCTTAAAGCTCTTTCCCAAGAGAAAGCACTCTGCCTCTaGTCTCCCACTCTGCCGAGG | + |
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Preference number: 2 (lower is better) Translates to: GREGLFSPRLTLKALSQEKALCL*SPTLPR Trigger: CCTCGGCAGAGTGGGAGAGCAGAGGCAGAGTGCTTT...CTCTTGGGAAAGAGCTTTAAGAGTAAGGCGGGGAGAAAACAAGCCTTCCCTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
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| 3UTR-3UTR CCA 90 bp | CTCTGCCTCTGCTCTCCCACTCTGCCGAGGCGACTCTTGTCTCACCCTGTTCCCATCACCATCAAGGATTaGATAAGCAAGTATGGGCTC | + |
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Preference number: 2 (lower is better) Translates to: LCLCSPTLPRRLLSHPVPITIKD*ISKYGL Trigger: GAGCCCATACTTGCTTATCCAATCCTTGATGGTGAT...GGGAACAGGGTGAGACAAGAGTCGCCTCGGCAGAGTGGGAGAGCAGAGGCAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
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| 3UTR-3UTR TCA 90 bp | GAGTCTGAGGGTGGGAGTGCAAATACCCCAGTAGGCATTGCCGTCCAAGTCTCGGTTCTCCCTTGTACCTaGGCTTTCTCTGTTCCTTCA | + |
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Preference number: 2 (lower is better) Translates to: ESEGGSANTPVGIAVQVSVLPCT*AFSVPS Trigger: TGAAGGAACAGAGAAAGCTCAGGTACAAGGGAGAAC...CGAGACTTGGACGGCAATGCCTACTGGGGTATTTGCACTCCCACCCTCAGACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
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| 3UTR-3UTR CCA 90 bp | GGGAGGGAAGGCTTGTTTTCTCCCCGCCTTACTCTTAAAGCTCTTTCCCAAGAGCAGGGTGCAGCACTCTaGGAAGCCAGAAAGCCAGTT | + |
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Preference number: 2 (lower is better) Translates to: GREGLFSPRLTLKALSQEQGAAL*EARKPV Trigger: AACTGGCTTTCTGGCTTCCCAGAGTGCTGCACCCTG...CTCTTGGGAAAGAGCTTTAAGAGTAAGGCGGGGAGAAAACAAGCCTTCCCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
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| 3UTR-3UTR GCA 90 bp | CCCAGGGTGCAGCACTCTGGGAAGCCAGAAAGCCAGTTAGTCCTCCACCAAAATGTCAGTTTGAGGGTCTaGTTTGCCCATTTCCCCTTT | + |
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Preference number: 2 (lower is better) Translates to: PRVQHSGKPESQLVLHQNVSLRV*FAHFPF Trigger: AAAGGGGAAATGGGCAAAGCAGACCCTCAAACTGAC...ATTTTGGTGGAGGACTAACTGGCTTTCTGGCTTCCCAGAGTGCTGCACCCTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
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| 3UTR-3UTR GCA 90 bp | CAAAAGCTTGCGATGCTCAAGGCCAGACTGGGAACTGATATAACACCTTCCTTCGCTGCTAACAGTCTCTaGTGGGTTAGGGAAGCGGCG | + |
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Preference number: 2 (lower is better) Translates to: QKLAMLKARLGTDITPSFAANSL*WVREAA Trigger: CGCCGCTTCCCTAACCCAGCAGAGACTGTTAGCAGC...GAAGGAAGGTGTTATATCAGTTCCCAGTCTGGCCTTGAGCATCGCAAGCTTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056974.4 ENSMUST00000105502.8 |
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| 3UTR-3UTR GCA 90 bp | CTCTGCCTCTGCTCTCCCACTCTGCCGAGGCGACTCTTGTCTCACCCTGTTCCCAAGAATCAAAAGATATaGACGTTTCACAAACAGTGC | + |
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Preference number: 2 (lower is better) Translates to: LCLCSPTLPRRLLSHPVPKNQKI*TFHKQC Trigger: GCACTGTTTGTGAAACGTGCATATCTTTTGATTCTT...GGGAACAGGGTGAGACAAGAGTCGCCTCGGCAGAGTGGGAGAGCAGAGGCAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
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| 3UTR-3UTR CCA 90 bp | GGGAGGGAAGGCTTGTTTTCTCCCCGCCTTACTCTTAAAGCTCTTTCCCAAGAGTTGGATAAGCAAGTATaGGCTCTCTGGCCAGCAGGT | + |
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Preference number: 2 (lower is better) Translates to: GREGLFSPRLTLKALSQELDKQV*ALWPAG Trigger: ACCTGCTGGCCAGAGAGCCCATACTTGCTTATCCAA...CTCTTGGGAAAGAGCTTTAAGAGTAAGGCGGGGAGAAAACAAGCCTTCCCTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
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| 3UTR-3UTR TCA 90 bp | CAAAAGCTTGCGATGCTCAAGGCCAGACTGGGAACTGATATAACACCTTCCTTCGGTCTTCCGTCAGTTTaGGGGTCTGCTTTGCCCATT | + |
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Preference number: 2 (lower is better) Translates to: QKLAMLKARLGTDITPSFGLPSV*GSALPI Trigger: AATGGGCAAAGCAGACCCTCAAACTGACGGAAGACC...GAAGGAAGGTGTTATATCAGTTCCCAGTCTGGCCTTGAGCATCGCAAGCTTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056974.4 ENSMUST00000105502.8 |
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| 3UTR-3UTR GCA 90 bp | CCAGAACTGGCTTCTTTGTACCTCTGTATCAGTGATTGCTTTTCTACAAAAGGTACATTGTCACAGGCGTaGAGGGCTCCCCAGGAGGGC | + |
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Preference number: 2 (lower is better) Translates to: PELASLYLCISDCFSTKGTLSQA*RAPQEG Trigger: GCCCTCCTGGGGAGCCCTGCACGCCTGTGACAATGT...ACCTTTTGTAGAAAAGCAATCACTGATACAGAGGTACAAAGAAGCCAGTTCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
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| 3UTR-3UTR TCA 90 bp | CCAGAACTGGCTTCTTTGTACCTCTGTATCAGTGATTGCTTTTCTACAAAAGGTGGGACAGCTGATGGCTaGAGCATCAGGGCGTGGCTA | + |
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Preference number: 2 (lower is better) Translates to: PELASLYLCISDCFSTKGGTADG*SIRAWL Trigger: TAGCCACGCCCTGATGCTTCAGCCATCAGCTGTCCC...ACCTTTTGTAGAAAAGCAATCACTGATACAGAGGTACAAAGAAGCCAGTTCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
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| 3UTR-3UTR GCA 90 bp | CCAGAACTGGCTTCTTTGTACCTCTGTATCAGTGATTGCTTTTCTACAAAAGGTCTCAGGAAGCAAAGGTaGACAAGGGGGCCAGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: PELASLYLCISDCFSTKGLRKQR*TRGPVL Trigger: CAGCACTGGCCCCCTTGTGCACCTTTGCTTCCTGAG...ACCTTTTGTAGAAAAGCAATCACTGATACAGAGGTACAAAGAAGCCAGTTCTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
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| 3UTR-3UTR CCA 90 bp | AATCAAAAGATATGCACGTTTCACAAACAGTGCCGTTGGACCAGCTGGTGCAGAAGAACTGGAAACTACTaGGTCAGATGCCTGGCTCTG | + |
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Preference number: 2 (lower is better) Translates to: NQKICTFHKQCRWTSWCRRTGNY*VRCLAL Trigger: CAGAGCCAGGCATCTGACCCAGTAGTTTCCAGTTCT...TCTGCACCAGCTGGTCCAACGGCACTGTTTGTGAAACGTGCATATCTTTTGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
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| 3UTR-3UTR CCA 90 bp | AAGTATTCCTGGAGTGTGACCGAGGCCTTGCAATCATTCATTCATGAAAGAATACCCATTCGTGGCATTTaGCAACGGGCAGAGGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: KYSWSVTEALQSFIHERIPIRGI*QRAEAE Trigger: CTCAGCCTCTGCCCGTTGCCAAATGCCACGAATGGG...TATTCTTTCATGAATGAATGATTGCAAGGCCTCGGTCACACTCCAGGAATACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
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| 3UTR-3UTR TCA 90 bp | AAGTATTCCTGGAGTGTGACCGAGGCCTTGCAATCATTCATTCATGAAAGAATAGCCTTTGGCGTTCTGTaGCATTGTCACAGGCGTGCA | + |
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Preference number: 2 (lower is better) Translates to: KYSWSVTEALQSFIHERIAFGVL*HCHRRA Trigger: TGCACGCCTGTGACAATGTCACAGAACGCCAAAGGC...TATTCTTTCATGAATGAATGATTGCAAGGCCTCGGTCACACTCCAGGAATACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
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| 3UTR-3UTR CCA 90 bp | AAAAGAATCAAAAGATATGCACGTTTCACAAACAGTGCCGTTGGACCAGCTGGTCCCCCGACTCAGAACTaGAAACTACTGGGTCAGATG | + |
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Preference number: 2 (lower is better) Translates to: KRIKRYARFTNSAVGPAGPPTQN*KLLGQM Trigger: CATCTGACCCAGTAGTTTCCAGTTCTGAGTCGGGGG...ACCAGCTGGTCCAACGGCACTGTTTGTGAAACGTGCATATCTTTTGATTCTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
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| 3UTR-3UTR TCA 90 bp | AAGTATTCCTGGAGTGTGACCGAGGCCTTGCAATCATTCATTCATGAAAGAATAGGTCTTCCGTCAGTTTaGGGGTCTGCTTTGCCCATT | + |
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Preference number: 2 (lower is better) Translates to: KYSWSVTEALQSFIHERIGLPSV*GSALPI Trigger: AATGGGCAAAGCAGACCCTCAAACTGACGGAAGACC...TATTCTTTCATGAATGAATGATTGCAAGGCCTCGGTCACACTCCAGGAATACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGAACTGGCTTCTTTGTACCTCTGTATCAGTGATTGCTTTTCTACAAAAGGTCTACTTGGTGGCCAATaGCCAAGCTACCCTGAAAGC | + |
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Preference number: 2 (lower is better) Translates to: PELASLYLCISDCFSTKGLLGGQ*PSYPES Trigger: GCTTTCAGGGTAGCTTGGCCATTGGCCACCAAGTAG...ACCTTTTGTAGAAAAGCAATCACTGATACAGAGGTACAAAGAAGCCAGTTCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
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| 3UTR-3UTR GCA 90 bp | AAGTATTCCTGGAGTGTGACCGAGGCCTTGCAATCATTCATTCATGAAAGAATAGTCCACAAGGTCACCTaGTCAGATGTCTCAACAGAC | + |
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Preference number: 2 (lower is better) Translates to: KYSWSVTEALQSFIHERIVHKVT*SDVSTD Trigger: GTCTGTTGAGACATCTGAGCAGGTGACCTTGTGGAC...TATTCTTTCATGAATGAATGATTGCAAGGCCTCGGTCACACTCCAGGAATACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGAACTGGCTTCTTTGTACCTCTGTATCAGTGATTGCTTTTCTACAAAAGGTCACACGCATGCTAAATaGCTCACCTGTAACTCCACG | + |
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Preference number: 2 (lower is better) Translates to: PELASLYLCISDCFSTKGHTHAK*LTCNST Trigger: CGTGGAGTTACAGGTGAGCCATTTAGCATGCGTGTG...ACCTTTTGTAGAAAAGCAATCACTGATACAGAGGTACAAAGAAGCCAGTTCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
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| 3UTR-3UTR CCA 90 bp | AAGTATTCCTGGAGTGTGACCGAGGCCTTGCAATCATTCATTCATGAAAGAATACTCATCAGGACTCCATaGGCTGGTTCTAAGTCTGGA | + |
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Preference number: 2 (lower is better) Translates to: KYSWSVTEALQSFIHERILIRTP*AGSKSG Trigger: TCCAGACTTAGAACCAGCCCATGGAGTCCTGATGAG...TATTCTTTCATGAATGAATGATTGCAAGGCCTCGGTCACACTCCAGGAATACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGGCAGGTCACTTGCAGATGAGTTAGATTTTGCATATGTTATAGAGTTCTGTTTTGAGGGTCTGCTTTaGCCATTTCCCCTTTCCTCA | + |
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Preference number: 2 (lower is better) Translates to: AGRSLADELDFAYVIEFCFEGLL*PFPLSS Trigger: TGAGGAAAGGGGAAATGGGCAAAGCAGACCCTCAAA...ACAGAACTCTATAACATATGCAAAATCTAACTCATCTGCAAGTGACCTGCCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056974.4 ENSMUST00000105502.8 |
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| 3UTR-3UTR GCA 90 bp | AAGGTTGAAAAGAATCAAAAGATATGCACGTTTCACAAACAGTGCCGTTGGACCTTTGAGGGTCTGCTTTaGCCATTTCCCCTTTCCTCA | + |
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Preference number: 2 (lower is better) Translates to: KVEKNQKICTFHKQCRWTFEGLL*PFPLSS Trigger: TGAGGAAAGGGGAAATGGGCAAAGCAGACCCTCAAA...GGTCCAACGGCACTGTTTGTGAAACGTGCATATCTTTTGATTCTTTTCAACCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGGCAGGTCACTTGCAGATGAGTTAGATTTTGCATATGTTATAGAGTTCTGTGTCAGTTTGAGGGTCTaGTTTGCCCATTTCCCCTTT | + |
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Preference number: 2 (lower is better) Translates to: AGRSLADELDFAYVIEFCVSLRV*FAHFPF Trigger: AAAGGGGAAATGGGCAAAGCAGACCCTCAAACTGAC...ACAGAACTCTATAACATATGCAAAATCTAACTCATCTGCAAGTGACCTGCCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056974.4 ENSMUST00000105502.8 |
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| 3UTR-3UTR CCA 90 bp | AAGTATTCCTGGAGTGTGACCGAGGCCTTGCAATCATTCATTCATGAAAGAATAACTGAGAATGCTACTTaGTGGCCAATGGCCAAGCTA | + |
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Preference number: 2 (lower is better) Translates to: KYSWSVTEALQSFIHERITENAT*WPMAKL Trigger: TAGCTTGGCCATTGGCCACCAAGTAGCATTCTCAGT...TATTCTTTCATGAATGAATGATTGCAAGGCCTCGGTCACACTCCAGGAATACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
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| 3UTR-3UTR CCA 90 bp | AAGTATTCCTGGAGTGTGACCGAGGCCTTGCAATCATTCATTCATGAAAGAATACATGGGTTCAGAAGTTaGCTGAAGTCACACCTGAGA | + |
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Preference number: 2 (lower is better) Translates to: KYSWSVTEALQSFIHERIHGFRS*LKSHLR Trigger: TCTCAGGTGTGACTTCAGCCAACTTCTGAACCCATG...TATTCTTTCATGAATGAATGATTGCAAGGCCTCGGTCACACTCCAGGAATACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
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| 3UTR-3UTR GCA 90 bp | CAAAAGCTTGCGATGCTCAAGGCCAGACTGGGAACTGATATAACACCTTCCTTCTCAACAGAAAAATACTaGAGGTTACTGTGTGTAGAA | + |
|
Preference number: 2 (lower is better) Translates to: QKLAMLKARLGTDITPSFSTEKY*RLLCVE Trigger: TTCTACACACAGTAACCTGCAGTATTTTTCTGTTGA...GAAGGAAGGTGTTATATCAGTTCCCAGTCTGGCCTTGAGCATCGCAAGCTTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056974.4 ENSMUST00000105502.8 |
||
| 3UTR-3UTR GCA 90 bp | CCAGAACTGGCTTCTTTGTACCTCTGTATCAGTGATTGCTTTTCTACAAAAGGTGGAGACATATGCATATaGTGTGCTAGTCAGAGCATC | + |
|
Preference number: 2 (lower is better) Translates to: PELASLYLCISDCFSTKGGDICI*CASQSI Trigger: GATGCTCTGACTAGCACAGCATATGCATATGTCTCC...ACCTTTTGTAGAAAAGCAATCACTGATACAGAGGTACAAAGAAGCCAGTTCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
||
| 3UTR-3UTR GCA 90 bp | TTTTTGAATATTTGGGTGTTCTTTTTATTACTGACAGCTGTGAGCCCTGTCTTGCGCACTAACCTGCTTTaGCCATTTCCCCTTTCCTCA | + |
|
Preference number: 2 (lower is better) Translates to: FLNIWVFFLLLTAVSPVLRTNLL*PFPLSS Trigger: TGAGGAAAGGGGAAATGGGCAAAGCAGGTTAGTGCG...CAAGACAGGGCTCACAGCTGTCAGTAATAAAAAGAACACCCAAATATTCAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000175881.8 |
||
| 3UTR-3UTR GCA 90 bp | TTTTTGAATATTTGGGTGTTCTTTTTATTACTGACAGCTGTGAGCCCTGTCTTGTGTGGCGCACTAACCTaGTTTGCCCATTTCCCCTTT | + |
|
Preference number: 2 (lower is better) Translates to: FLNIWVFFLLLTAVSPVLCGALT*FAHFPF Trigger: AAAGGGGAAATGGGCAAAGCAGGTTAGTGCGCCACA...CAAGACAGGGCTCACAGCTGTCAGTAATAAAAAGAACACCCAAATATTCAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000175881.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGTATTCCTGGAGTGTGACCGAGGCCTTGCAATCATTCATTCATGAAAGAATAAATGTGTTAAGTTTGTaGGGTCCCACAGGCTCAAAA | + |
|
Preference number: 2 (lower is better) Translates to: KYSWSVTEALQSFIHERINVLSL*GPTGSK Trigger: TTTTGAGCCTGTGGGACCCCACAAACTTAACACATT...TATTCTTTCATGAATGAATGATTGCAAGGCCTCGGTCACACTCCAGGAATACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGTATTCCTGGAGTGTGACCGAGGCCTTGCAATCATTCATTCATGAAAGAATACTTCAGATATCACTTTaGAGACATATGCATATGCTG | + |
|
Preference number: 2 (lower is better) Translates to: KYSWSVTEALQSFIHERILQISL*RHMHML Trigger: CAGCATATGCATATGTCTCCAAAGTGATATCTGAAG...TATTCTTTCATGAATGAATGATTGCAAGGCCTCGGTCACACTCCAGGAATACTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
||
| 3UTR GCA 72 bp | GATGGCGGGAGACCACAGCCCCACCGAGCAGGCAACTaGGGAGTGGGCATCAAGGTCTCCACCCACAGACCA | + |
|
Preference number: 3 (lower is better) Translates to: DGGRPQPHRAGN*GVGIKVSTHRP Trigger: TGGTCTGTGGGTGGAGACCTTGATGCCCACTCCGCAGTTGCCTGCTCGGTGGGGCTGTGGTCTCCCGCCATC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
||
| 3UTR CCA 72 bp | TGCACAAGGGGGCCAGTGCTGAGGCAGGGGATTGGGTaGCACGCCTGGGTTGGTGTTCACAGCTACAGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: CTRGPVLRQGIG*HAWVGVHSYSA Trigger: TGCACTGTAGCTGTGAACACCAACCCAGGCGTGCCACCCAATCCCCTGCCTCAGCACTGGCCCCCTTGTGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
||
| 3UTR TCA 72 bp | GAACGCCAGTCTTCCACATGGGCCTTTGGCGTTCTGTaGCATTGTCACAGGCGTGCAGGGCTCCCCAGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: ERQSSTWAFGVL*HCHRRAGLPRR Trigger: CCTCCTGGGGAGCCCTGCACGCCTGTGACAATGTCACAGAACGCCAAAGGCCCATGTGGAAGACTGGCGTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
||
| 3UTR GCA 72 bp | TGTCACAGGCGTGCAGGGCTCCCCAGGAGGGCTCACTaGACACTTCTTTCTCATCAGGACTCCATGGGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: CHRRAGLPRRAH*TLLSHQDSMGW Trigger: CCAGCCCATGGAGTCCTGATGAGAAAGAAGTGTGCAGTGAGCCCTCCTGGGGAGCCCTGCACGCCTGTGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTGTGCTAGGGGCTGTGATGGCCATCTTCACCACCCCCAGAGTGCTCAGGAAGGGTGGCACGCCTGGGTaGGTGTTCACAGCTACAGTG | + |
|
Preference number: 3 (lower is better) Translates to: TVLGAVMAIFTTPRVLRKGGTPG*VFTATV Trigger: CACTGTAGCTGTGAACACCAACCCAGGCGTGCCACC...CTTCCTGAGCACTCTGGGGGTGGTGAAGATGGCCATCACAGCCCCTAGCACAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
||
| 3UTR TCA 72 bp | GAGAATGCTACTTGGTGGCCAATGGCCAAGCTACCCTaGAAGCAGGGTCCCAACAGAAGGTACAGAGGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: ENATWWPMAKLP*KQGPNRRYRGP Trigger: GGGCCCTCTGTACCTTCTGTTGGGACCCTGCTTTCAGGGTAGCTTGGCCATTGGCCACCAAGTAGCATTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
||
| 3UTR CCA 72 bp | GCCACCCTGAGACATTCCACCCAGGGTGCAGCACTCTaGGAAGCCAGAAAGCCAGTTAGTCCTCCACCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: ATLRHSTQGAAL*EARKPVSPPPK Trigger: TTTTGGTGGAGGACTAACTGGCTTTCTGGCTTCCCAGAGTGCTGCACCCTGGGTGGAATGTCTCAGGGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
||
| 3UTR TCA 72 bp | CACCAAAATGACACAGTTGCGGGGACAGCTGATGGCTaGAGCATCAGGGCGTGGCTAGCATCACCATCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: HQNDTVAGTADG*SIRAWLASPSR Trigger: CCTTGATGGTGATGCTAGCCACGCCCTGATGCTTCAGCCATCAGCTGTCCCCGCAACTGTGTCATTTTGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
||
| 3UTR GCA 72 bp | AGGATTGCGTCTGCCTCAAACCAGACGACCAACTGCTaGAGGTGTTTAAACATGGCCACGCGCCACACGAAA | + |
|
Preference number: 3 (lower is better) Translates to: RIASASNQTTNC*RCLNMATRHTK Trigger: TTTCGTGTGGCGCGTGGCCATGTTTAAACACCTGCAGCAGTTGGTCGTCTGGTTTGAGGCAGACGCAATCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
||
| 3UTR GCA 72 bp | CAGCGTATGGTTAGACAAGGTCCTCAGTACCCAGAATaGAGCAGGATTGCGTCTGCCTCAAACCAGACGACC | + |
|
Preference number: 3 (lower is better) Translates to: QRMVRQGPQYPE*SRIASASNQTT Trigger: GGTCGTCTGGTTTGAGGCAGACGCAATCCTGCTGCATTCTGGGTACTGAGGACCTTGTCTAACCATACGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCTGCCTCTGCTCTCCCACTCTGCCGAGGCGACTCTTGTCTCACCCTGTTCCCCCTTCAGATATCACTTaGGAGACATATGCATATGCT | + |
|
Preference number: 3 (lower is better) Translates to: LCLCSPTLPRRLLSHPVPPSDIT*ETYAYA Trigger: AGCATATGCATATGTCTCCAAAGTGATATCTGAAGG...GGGAACAGGGTGAGACAAGAGTCGCCTCGGCAGAGTGGGAGAGCAGAGGCAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
||
| 3UTR TCA 72 bp | CTCATGTTGGAAGCACTTGGGGTTCTCCCTTGTACCTaGGCTTTCTCTGTTCCTTCAGCTGCCACCCTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: LMLEALGVLPCT*AFSVPSAATLR Trigger: TCTCAGGGTGGCAGCTGAAGGAACAGAGAAAGCTCAGGTACAAGGGAGAACCCCAAGTGCTTCCAACATGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
||
| 3UTR GCA 72 bp | GGAGGGTTGTCCTTTCCACTCCCAGTGCCTGTAAACTaGAGAGCCAAGACATTATCTTGTGAGCTGGTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: GGLSFPLPVPVN*RAKTLSCELVC Trigger: GCAGACCAGCTCACAAGATAATGTCTTGGCTCTGCAGTTTACAGGCACTGGGAGTGGAAAGGACAACCCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
||
| 3UTR CCA 72 bp | GCAGACGTGGTTTGTCGCTCTCACACGCATGCTAAATaGCTCACCTGTAACTCCACGTCTTCTACGAAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: ADVVCRSHTHAK*LTCNSTSSTKQ Trigger: CTGCTTCGTAGAAGACGTGGAGTTACAGGTGAGCCATTTAGCATGCGTGTGAGAGCGACAAACCACGTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
||
| 3UTR CCA 72 bp | ACAGAGAATGCTCAGGGCCCTCATGTTGGAAGCACTTaGGGTTCTCCCTTGTACCTGAGCTTTCTCTGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: TENAQGPHVGST*GSPLYLSFLCS Trigger: GGAACAGAGAAAGCTCAGGTACAAGGGAGAACCCCAAGTGCTTCCAACATGAGGGCCCTGAGCATTCTCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
||
| 3UTR CCA 72 bp | GGGCTCACTGCACACTTCTTTCTCATCAGGACTCCATaGGCTGGTTCTAAGTCTGGAAGGTCCACAAGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: GLTAHFFLIRTP*AGSKSGRSTRS Trigger: TGACCTTGTGGACCTTCCAGACTTAGAACCAGCCCATGGAGTCCTGATGAGAAAGAAGTGTGCAGTGAGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
||
| 3UTR-3UTR CAA 90 bp | CCCAGGGTGCAGCACTCTGGGAAGCCAGAAAGCCAGTTAGTCCTCCACCAAAATCATCACCATCAAGGATaGGATAAGCAAGTATGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: PRVQHSGKPESQLVLHQNHHHQG*DKQVWA Trigger: AGCCCATACTTGCTTATCCAATCCTTGATGGTGATG...ATTTTGGTGGAGGACTAACTGGCTTTCTGGCTTCCCAGAGTGCTGCACCCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
||
| 3UTR CCA 72 bp | CAAAACTTGGCTATAGACAATCCCACAGCACTGGGCTaGCAGCAGTCATGTTTGGAGAGAGCTAGAGCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: QNLAIDNPTALG*QQSCLERARAL Trigger: AAGGGCTCTAGCTCTCTCCAAACATGACTGCTGCCAGCCCAGTGCTGTGGGATTGTCTATAGCCAAGTTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105501.2 |
||
| 3UTR CCA 72 bp | CATGGGTTCAGAAGTTGGCTGAAGTCACACCTGAGATaGGGTGTACCTCTCCTTAGGCTGACGCTAATCATC | + |
|
Preference number: 3 (lower is better) Translates to: HGFRSWLKSHLR*GVPLLRLTLII Trigger: GATGATTAGCGTCAGCCTAAGGAGAGGTACACCCCATCTCAGGTGTGACTTCAGCCAACTTCTGAACCCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
||
| 3UTR CCA 72 bp | GTCTGTCCCTATGAACCTGTACATGGGTTCAGAAGTTaGCTGAAGTCACACCTGAGATGGGGTGTACCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: VCPYEPVHGFRS*LKSHLRWGVPL Trigger: GAGAGGTACACCCCATCTCAGGTGTGACTTCAGCCAACTTCTGAACCCATGTACAGGTTCATAGGGACAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAAAGCTTGCGATGCTCAAGGCCAGACTGGGAACTGATATAACACCTTCCTTCAGGTCTTCCGTCAGTTaGAGGGTCTGCTTTGCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: QKLAMLKARLGTDITPSFRSSVS*RVCFAH Trigger: ATGGGCAAAGCAGACCCTCAAACTGACGGAAGACCT...GAAGGAAGGTGTTATATCAGTTCCCAGTCTGGCCTTGAGCATCGCAAGCTTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056974.4 ENSMUST00000105502.8 |
||
| 3UTR-3UTR CAA 90 bp | AATCAAAAGATATGCACGTTTCACAAACAGTGCCGTTGGACCAGCTGGTGCAGAAGGTCTTCCGTCAGTTaGAGGGTCTGCTTTGCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: NQKICTFHKQCRWTSWCRRSSVS*RVCFAH Trigger: ATGGGCAAAGCAGACCCTCAAACTGACGGAAGACCT...TCTGCACCAGCTGGTCCAACGGCACTGTTTGTGAAACGTGCATATCTTTTGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
||
| 3UTR TCA 72 bp | GAGCGCTTCAAGAAAAGGCAGAGTTGTCTGTCCCTATaGACCTGTACATGGGTTCAGAAGTTGGCTGAAGTC | + |
|
Preference number: 3 (lower is better) Translates to: ERFKKRQSCLSL*TCTWVQKLAEV Trigger: GACTTCAGCCAACTTCTGAACCCATGTACAGGTTCATAGGGACAGACAACTCTGCCTTTTCTTGAAGCGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
||
| 3UTR CCA 72 bp | AATCAAAAGATATGCACGTTTCACAAACAGTGCCGTTaGACCAGCTGGTGCAGACGTGGTTTGTCGCTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: NQKICTFHKQCR*TSWCRRGLSLS Trigger: TGAGAGCGACAAACCACGTCTGCACCAGCTGGTCCAACGGCACTGTTTGTGAAACGTGCATATCTTTTGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
||
| 3UTR CCA 72 bp | TTTCCCAAGAGATTCAAAGGCTGCTTGCTCGTTCAGTaGATGGAGCGCTTCAAGAAAAGGCAGAGTTGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: FPKRFKGCLLVQ*MERFKKRQSCL Trigger: CAGACAACTCTGCCTTTTCTTGAAGCGCTCCATCCACTGAACGAGCAAGCAGCCTTTGAATCTCTTGGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGAGGGAAGGCTTGTTTTCTCCCCGCCTTACTCTTAAAGCTCTTTCCCAAGAGAAGTCTGACACACAATaGGGCTTCTTAAGAGAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: GREGLFSPRLTLKALSQEKSDTQ*GFLREL Trigger: AAGCTCTCTTAAGAAGCCCAATTGTGTGTCAGACTT...CTCTTGGGAAAGAGCTTTAAGAGTAAGGCGGGGAGAAAACAAGCCTTCCCTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
||
| 3UTR GCA 72 bp | GAAAAGAATCAAAAGATATGCACGTTTCACAAACAGTaGCGTTGGACCAGCTGGTGCAGACGTGGTTTGTCG | + |
|
Preference number: 3 (lower is better) Translates to: EKNQKICTFHKQ*RWTSWCRRGLS Trigger: CGACAAACCACGTCTGCACCAGCTGGTCCAACGGCACTGTTTGTGAAACGTGCATATCTTTTGATTCTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
||
| 3UTR GCA 72 bp | AACTGCAGAGCCAAGACATTATCTTGTGAGCTGGTCTaGGTTTCTTTAAACTCAACAGAGAATGCTCAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: NCRAKTLSCELV*VSLNSTENAQG Trigger: GCCCTGAGCATTCTCTGTTGAGTTTAAAGAAACGCAGACCAGCTCACAAGATAATGTCTTGGCTCTGCAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGTATTCCTGGAGTGTGACCGAGGCCTTGCAATCATTCATTCATGAAAGAATATCATGTTGGAAGCACTaGGGGTTCTCCCTTGTACCT | + |
|
Preference number: 3 (lower is better) Translates to: KYSWSVTEALQSFIHERISCWKH*GFSLVP Trigger: AGGTACAAGGGAGAACCCCAAGTGCTTCCAACATGA...TATTCTTTCATGAATGAATGATTGCAAGGCCTCGGTCACACTCCAGGAATACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
||
| 3UTR CCA 72 bp | ATGCACAACACACTTTTCAGTATTCACCAATTCTTCTaGTCTCCTTCACACCTGTCCACATTTCCCACGTAC | + |
|
Preference number: 3 (lower is better) Translates to: MHNTLFSIHQFF*SPSHLSTFPTY Trigger: GTACGTGGGAAATGTGGACAGGTGTGAAGGAGACCAGAAGAATTGGTGAATACTGAAAAGTGTGTTGTGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
||
| 3UTR TCA 72 bp | AGTGCCTGTAAACTGCAGAGCCAAGACATTATCTTGTaGGCTGGTCTGCGTTTCTTTAAACTCAACAGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: SACKLQSQDIIL*AGLRFFKLNRE Trigger: TTCTCTGTTGAGTTTAAAGAAACGCAGACCAGCTCACAAGATAATGTCTTGGCTCTGCAGTTTACAGGCACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
||
| 3UTR GCA 72 bp | GGAAAACAGTTCTATGTGCTTCAGCCGTCATTATGTTaGAGAGGATACAATGGAGAACACACCTCTAATGCA | + |
|
Preference number: 3 (lower is better) Translates to: GKQFYVLQPSLC*RGYNGEHTSNA Trigger: TGCATTAGAGGTGTGTTCTCCATTGTATCCTCTGCAACATAATGACGGCTGAAGCACATAGAACTGTTTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
||
| CDS-3UTR GCA 90 bp | CTCTGCCTCTGCTCTCCCACTCTGCCGAGGCGACTCTTGTCTCACCCTGTTCCCCCCGACCCGAGGTCCTaGCCTCCTGGAGCCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LCLCSPTLPRRLLSHPVPPDPRS*PPGASS Trigger: GCTGCTGGCTCCAGGAGGGCAGGACCTCGGGTCGGG...GGGAACAGGGTGAGACAAGAGTCGCCTCGGCAGAGTGGGAGAGCAGAGGCAGAG 67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
||
| CDS-3UTR GCA 90 bp | CAGCAGTCATGTTTGGAGAGAGCTAGAGCCCTTCCAGATGCAACAGGGCTGCCGCCCGACCCGAGGTCCTaGCCTCCTGGAGCCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QQSCLERARALPDATGLPPDPRS*PPGASS Trigger: GCTGCTGGCTCCAGGAGGGCAGGACCTCGGGTCGGG...CGGCAGCCCTGTTGCATCTGGAAGGGCTCTAGCTCTCTCCAAACATGACTGCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105501.2 |
||
| CDS-3UTR TCA 90 bp | GCTGGCAGCAGTCATGTTTGGAGAGAGCTAGAGCCCTTCCAGATGCAACAGGGCTGTGGCAGTGGCTGCTaGGGCTGCAGCTGCGTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: AGSSHVWRELEPFQMQQGCGSGC*GCSCVG Trigger: GCCGACGCAGCTGCAGCCTCAGCAGCCACTGCCACA...GCCCTGTTGCATCTGGAAGGGCTCTAGCTCTCTCCAAACATGACTGCTGCCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105501.2 |
||
| CDS-3UTR GCA 90 bp | CGGCGATGCTTTCCCATTGCATTGTGGCGCACTAACCTGCTTTGCCCATTTCCCCCCGACCCGAGGTCCTaGCCTCCTGGAGCCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RRCFPIALWRTNLLCPFPPDPRS*PPGASS Trigger: GCTGCTGGCTCCAGGAGGGCAGGACCTCGGGTCGGG...GGGAAATGGGCAAAGCAGGTTAGTGCGCCACAATGCAATGGGAAAGCATCGCCG 62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000175881.8 |
||
| 3UTR CAA 72 bp | CCAGTCTTCCACATGGGCCTTTGGCGTTCTGTGACATaGTCACAGGCGTGCAGGGCTCCCCAGGAGGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PVFHMGLWRSVT*SQACRAPQEGS Trigger: TGAGCCCTCCTGGGGAGCCCTGCACGCCTGTGACAATGTCACAGAACGCCAAAGGCCCATGTGGAAGACTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
||
| CDS-3UTR TCA 90 bp | CACCGGCGATGCTTTCCCATTGCATTGTGGCGCACTAACCTGCTTTGCCCATTTTGTGGCAGTGGCTGCTaGGGCTGCAGCTGCGTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: HRRCFPIALWRTNLLCPFCGSGC*GCSCVG Trigger: GCCGACGCAGCTGCAGCCTCAGCAGCCACTGCCACA...AAATGGGCAAAGCAGGTTAGTGCGCCACAATGCAATGGGAAAGCATCGCCGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175881.8 |
||
| CDS-3UTR CCA 90 bp | AAGCCAGAAAGCCAGTTAGTCCTCCACCAAAATGACACAGTTGCGGGGACAGCTGTCGTCTGCCGACTCTaGGGCAGCCTGCAGGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: KPESQLVLHQNDTVAGTAVVCRL*GSLQGR Trigger: GCGGCCCTGCAGGCTGCCCCAGAGTCGGCAGACGAC...AGCTGTCCCCGCAACTGTGTCATTTTGGTGGAGGACTAACTGGCTTTCTGGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
||
| CDS-3UTR CCA 90 bp | CGGCGATGCTTTCCCATTGCATTGTGGCGCACTAACCTGCTTTGCCCATTTCCCGTTGAAGGAGCCGGTTaGGGAGCCCAGGCCGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RRCFPIALWRTNLLCPFPVEGAG*GAQAGA Trigger: AGCTCCGGCCTGGGCTCCCCAACCGGCTCCTTCAAC...GGGAAATGGGCAAAGCAGGTTAGTGCGCCACAATGCAATGGGAAAGCATCGCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175881.8 |
||
| CDS-3UTR CCA 90 bp | CTCTGCCTCTGCTCTCCCACTCTGCCGAGGCGACTCTTGTCTCACCCTGTTCCCCCAGGTCCAAGTCACTaGGGAACTTATCGTGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LCLCSPTLPRRLLSHPVPPGPSH*GTYRGP Trigger: TGGGCCACGATAAGTTCCCCAGTGACTTGGACCTGG...GGGAACAGGGTGAGACAAGAGTCGCCTCGGCAGAGTGGGAGAGCAGAGGCAGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
||
| CDS-3UTR GCA 90 bp | GAGTCTGAGGGTGGGAGTGCAAATACCCCAGTAGGCATTGCCGTCCAAGTCTCGACAGGCTGGCAGAGCTaGTGTACAGCATGGGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: ESEGGSANTPVGIAVQVSTGWQS*CTAWGT Trigger: TGTCCCCCATGCTGTACAGCAGCTCTGCCAGCCTGT...CGAGACTTGGACGGCAATGCCTACTGGGGTATTTGCACTCCCACCCTCAGACTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
||
| CDS-3UTR CCA 90 bp | CAAAAGCTTGCGATGCTCAAGGCCAGACTGGGAACTGATATAACACCTTCCTTCGTCGTCTGCCGACTCTaGGGCAGCCTGCAGGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: QKLAMLKARLGTDITPSFVVCRL*GSLQGR Trigger: GCGGCCCTGCAGGCTGCCCCAGAGTCGGCAGACGAC...GAAGGAAGGTGTTATATCAGTTCCCAGTCTGGCCTTGAGCATCGCAAGCTTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056974.4 ENSMUST00000105502.8 |
||
| CDS-3UTR GCA 90 bp | CGGCGATGCTTTCCCATTGCATTGTGGCGCACTAACCTGCTTTGCCCATTTCCCACAGGCTGGCAGAGCTaGTGTACAGCATGGGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: RRCFPIALWRTNLLCPFPTGWQS*CTAWGT Trigger: TGTCCCCCATGCTGTACAGCAGCTCTGCCAGCCTGT...GGGAAATGGGCAAAGCAGGTTAGTGCGCCACAATGCAATGGGAAAGCATCGCCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175881.8 |
||
| 3UTR CAA 72 bp | GAACTGGAAACTACTGGGTCAGATGCCTGGCTCTGTTaGCTTCGCCTACGCATAGTTCGGTCCTGGTCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ELETTGSDAWLC*LRLRIVRSWSG Trigger: GCCCGACCAGGACCGAACTATGCGTAGGCGAAGCAAACAGAGCCAGGCATCTGACCCAGTAGTTTCCAGTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
||
| 3UTR CAA 72 bp | CAGGGCCCTCATGTTGGAAGCACTTGGGGTTCTCCCTaGTACCTGAGCTTTCTCTGTTCCTTCAGCTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QGPHVGSTWGSP*YLSFLCSFSCH Trigger: GTGGCAGCTGAAGGAACAGAGAAAGCTCAGGTACAAGGGAGAACCCCAAGTGCTTCCAACATGAGGGCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
||
| CDS-3UTR TCA 90 bp | CAACAGGGCTGCCGTGAGGACAGCAGACACGCCCGTGCTTGGCTGTTCCGTTCTCAAATCTATGGCTTTTaGGTTCAGAAAGCTTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QQGCREDSRHARAWLFRSQIYGF*VQKASS Trigger: GCTGGAAGCTTTCTGAACTCAAAAGCCATAGATTTG...AGAACGGAACAGCCAAGCACGGGCGTGTCTGCTGTCCTCACGGCAGCCCTGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105501.2 |
||
| CDS-3UTR CCA 90 bp | CACCGGCGATGCTTTCCCATTGCATTGTGGCGCACTAACCTGCTTTGCCCATTTAGCTGCTGTACAGCATaGGGGACAGGGGTCCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: HRRCFPIALWRTNLLCPFSCCTA*GTGVHH Trigger: ATGATGGACCCCTGTCCCCCATGCTGTACAGCAGCT...AAATGGGCAAAGCAGGTTAGTGCGCCACAATGCAATGGGAAAGCATCGCCGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175881.8 |
||
| CDS-3UTR TCA 90 bp | CAGATGCCACTGGCTCTACAAAACTTGGCTATAGACAATCCCACAGCACTGGGCATGAGACTCTCGAGATaGAGACGACCAGGGCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: QMPLALQNLAIDNPTALGMRLSR*RRPGPP Trigger: TGGTGGCCCTGGTCGTCTTCATCTCGAGAGTCTCAT...GCCCAGTGCTGTGGGATTGTCTATAGCCAAGTTTTGTAGAGCCAGTGGCATCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105501.2 |
||
| CDS-3UTR GCA 90 bp | GCTGGCAGGTCACTTGCAGATGAGTTAGATTTTGCATATGTTATAGAGTTCTGTCCCGACCCGAGGTCCTaGCCTCCTGGAGCCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AGRSLADELDFAYVIEFCPDPRS*PPGASS Trigger: GCTGCTGGCTCCAGGAGGGCAGGACCTCGGGTCGGG...ACAGAACTCTATAACATATGCAAAATCTAACTCATCTGCAAGTGACCTGCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056974.4 ENSMUST00000105502.8 |
||
| CDS-3UTR CCA 90 bp | GCTGGCAGGTCACTTGCAGATGAGTTAGATTTTGCATATGTTATAGAGTTCTGTCGCTGCTGCGGGACGTaGGGCTGCCAGGCCACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: AGRSLADELDFAYVIEFCRCCGT*GCQATW Trigger: CCAAGTGGCCTGGCAGCCCCACGTCCCGCAGCAGCG...ACAGAACTCTATAACATATGCAAAATCTAACTCATCTGCAAGTGACCTGCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056974.4 ENSMUST00000105502.8 |
||
| CDS-3UTR CCA 90 bp | AAGCCAGAAAGCCAGTTAGTCCTCCACCAAAATGACACAGTTGCGGGGACAGCTAGCTGCTGTACAGCATaGGGGACAGGGGTCCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: KPESQLVLHQNDTVAGTASCCTA*GTGVHH Trigger: ATGATGGACCCCTGTCCCCCATGCTGTACAGCAGCT...AGCTGTCCCCGCAACTGTGTCATTTTGGTGGAGGACTAACTGGCTTTCTGGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
||
| CDS-3UTR CCA 90 bp | CAAAAGCTTGCGATGCTCAAGGCCAGACTGGGAACTGATATAACACCTTCCTTCCCAGGCCGGAGCTCTTaGCGGTATATGGGAAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QKLAMLKARLGTDITPSFPGRSS*RYMGSW Trigger: CCAGCTTCCCATATACCGCCAAGAGCTCCGGCCTGG...GAAGGAAGGTGTTATATCAGTTCCCAGTCTGGCCTTGAGCATCGCAAGCTTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056974.4 ENSMUST00000105502.8 |
||
| CDS-3UTR CCA 90 bp | CGGCGATGCTTTCCCATTGCATTGTGGCGCACTAACCTGCTTTGCCCATTTCCCATCATGACGTCGCTGTaGCTGAGTGAGTCTGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RRCFPIALWRTNLLCPFPIMTSL*LSESEA Trigger: TGCTTCAGACTCACTCAGCCACAGCGACGTCATGAT...GGGAAATGGGCAAAGCAGGTTAGTGCGCCACAATGCAATGGGAAAGCATCGCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175881.8 |
||
| 3UTR CAA 72 bp | GGCCCAGGCTATACCTCTGTCAAGTCTGACACACAATaGGGCTTCTTAAGAGAGCTTGGCCTCTCTGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GPGYTSVKSDTQ*GFLRELGLSVW Trigger: CCACACAGAGAGGCCAAGCTCTCTTAAGAAGCCCAATTGTGTGTCAGACTTGACAGAGGTATAGCCTGGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
||
| 3UTR CAA 72 bp | TTAGACAAGGTCCTCAGTACCCAGAATGCAGCAGGATaGCGTCTGCCTCAAACCAGACGACCAACTGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LDKVLSTQNAAG*RLPQTRRPTAA Trigger: TGCAGCAGTTGGTCGTCTGGTTTGAGGCAGACGCAATCCTGCTGCATTCTGGGTACTGAGGACCTTGTCTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
||
| CDS-3UTR TCA 90 bp | GCTGGCAGGTCACTTGCAGATGAGTTAGATTTTGCATATGTTATAGAGTTCTGTTGTGGCAGTGGCTGCTaGGGCTGCAGCTGCGTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: AGRSLADELDFAYVIEFCCGSGC*GCSCVG Trigger: GCCGACGCAGCTGCAGCCTCAGCAGCCACTGCCACA...ACAGAACTCTATAACATATGCAAAATCTAACTCATCTGCAAGTGACCTGCCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056974.4 ENSMUST00000105502.8 |
||
| CDS-3UTR TCA 90 bp | CCAGAACTGGCTTCTTTGTACCTCTGTATCAGTGATTGCTTTTCTACAAAAGGTTGTGGCAGTGGCTGCTaGGGCTGCAGCTGCGTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: PELASLYLCISDCFSTKGCGSGC*GCSCVG Trigger: GCCGACGCAGCTGCAGCCTCAGCAGCCACTGCCACA...ACCTTTTGTAGAAAAGCAATCACTGATACAGAGGTACAAAGAAGCCAGTTCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
||
| CDS-3UTR CCA 90 bp | TTTTTGAATATTTGGGTGTTCTTTTTATTACTGACAGCTGTGAGCCCTGTCTTGGTCGTCTGCCGACTCTaGGGCAGCCTGCAGGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: FLNIWVFFLLLTAVSPVLVVCRL*GSLQGR Trigger: GCGGCCCTGCAGGCTGCCCCAGAGTCGGCAGACGAC...CAAGACAGGGCTCACAGCTGTCAGTAATAAAAAGAACACCCAAATATTCAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000175881.8 |
||
| CDS-3UTR CCA 90 bp | TTTTTGAATATTTGGGTGTTCTTTTTATTACTGACAGCTGTGAGCCCTGTCTTGCGCTGCTGCGGGACGTaGGGCTGCCAGGCCACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: FLNIWVFFLLLTAVSPVLRCCGT*GCQATW Trigger: CCAAGTGGCCTGGCAGCCCCACGTCCCGCAGCAGCG...CAAGACAGGGCTCACAGCTGTCAGTAATAAAAAGAACACCCAAATATTCAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000175881.8 |
||
| CDS-3UTR CCA 90 bp | CAAAAGCTTGCGATGCTCAAGGCCAGACTGGGAACTGATATAACACCTTCCTTCAGCTGCTGTACAGCATaGGGGACAGGGGTCCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: QKLAMLKARLGTDITPSFSCCTA*GTGVHH Trigger: ATGATGGACCCCTGTCCCCCATGCTGTACAGCAGCT...GAAGGAAGGTGTTATATCAGTTCCCAGTCTGGCCTTGAGCATCGCAAGCTTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056974.4 ENSMUST00000105502.8 |
||
| CDS-3UTR CCA 90 bp | GCTGGCAGGTCACTTGCAGATGAGTTAGATTTTGCATATGTTATAGAGTTCTGTGTTGAAGGAGCCGGTTaGGGAGCCCAGGCCGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: AGRSLADELDFAYVIEFCVEGAG*GAQAGA Trigger: AGCTCCGGCCTGGGCTCCCCAACCGGCTCCTTCAAC...ACAGAACTCTATAACATATGCAAAATCTAACTCATCTGCAAGTGACCTGCCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056974.4 ENSMUST00000105502.8 |
||
| CDS-3UTR CCA 90 bp | CCAGAACTGGCTTCTTTGTACCTCTGTATCAGTGATTGCTTTTCTACAAAAGGTGTTGAAGGAGCCGGTTaGGGAGCCCAGGCCGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PELASLYLCISDCFSTKGVEGAG*GAQAGA Trigger: AGCTCCGGCCTGGGCTCCCCAACCGGCTCCTTCAAC...ACCTTTTGTAGAAAAGCAATCACTGATACAGAGGTACAAAGAAGCCAGTTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
||
| CDS-3UTR GCA 90 bp | GCTGGCAGGTCACTTGCAGATGAGTTAGATTTTGCATATGTTATAGAGTTCTGTGACTCTGGGGCAGCCTaGAGGGCCGCCTTCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: AGRSLADELDFAYVIEFCDSGAA*RAAFFL Trigger: CAAGAAGAAGGCGGCCCTGCAGGCTGCCCCAGAGTC...ACAGAACTCTATAACATATGCAAAATCTAACTCATCTGCAAGTGACCTGCCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056974.4 ENSMUST00000105502.8 |
||
| 3UTR CAA 72 bp | CAACAACAAAACCAGATGCCACTGGCTCTACAAAACTaGGCTATAGACAATCCCACAGCACTGGGCTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QQQNQMPLALQN*AIDNPTALGWQ Trigger: CTGCCAGCCCAGTGCTGTGGGATTGTCTATAGCCAAGTTTTGTAGAGCCAGTGGCATCTGGTTTTGTTGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105501.2 |
||
| 3UTR CAA 72 bp | GAATCAAAAGATATGCACGTTTCACAAACAGTGCCGTaGGACCAGCTGGTGCAGACGTGGTTTGTCGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ESKDMHVSQTVP*DQLVQTWFVAL Trigger: GAGAGCGACAAACCACGTCTGCACCAGCTGGTCCAACGGCACTGTTTGTGAAACGTGCATATCTTTTGATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
||
| 3UTR CAA 72 bp | ATCCAAGTTTTAAGACTAGGGGAATGCACCGGAGGGTaGTCCTTTCCACTCCCAGTGCCTGTAAACTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: IQVLRLGECTGG*SFPLPVPVNCR Trigger: TCTGCAGTTTACAGGCACTGGGAGTGGAAAGGACAACCCTCCGGTGCATTCCCCTAGTCTTAAAACTTGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
||
| CDS-3UTR CCA 90 bp | GCTGGCAGGTCACTTGCAGATGAGTTAGATTTTGCATATGTTATAGAGTTCTGTCCAGGCCGGAGCTCTTaGCGGTATATGGGAAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AGRSLADELDFAYVIEFCPGRSS*RYMGSW Trigger: CCAGCTTCCCATATACCGCCAAGAGCTCCGGCCTGG...ACAGAACTCTATAACATATGCAAAATCTAACTCATCTGCAAGTGACCTGCCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056974.4 ENSMUST00000105502.8 |
||
| CDS-3UTR GCA 90 bp | GCTGGCAGGTCACTTGCAGATGAGTTAGATTTTGCATATGTTATAGAGTTCTGTACAGGCTGGCAGAGCTaGTGTACAGCATGGGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: AGRSLADELDFAYVIEFCTGWQS*CTAWGT Trigger: TGTCCCCCATGCTGTACAGCAGCTCTGCCAGCCTGT...ACAGAACTCTATAACATATGCAAAATCTAACTCATCTGCAAGTGACCTGCCAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056974.4 ENSMUST00000105502.8 |
||
| CDS-3UTR CCA 90 bp | AATCAAAAGATATGCACGTTTCACAAACAGTGCCGTTGGACCAGCTGGTGCAGAATCATGACGTCGCTGTaGCTGAGTGAGTCTGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: NQKICTFHKQCRWTSWCRIMTSL*LSESEA Trigger: TGCTTCAGACTCACTCAGCCACAGCGACGTCATGAT...TCTGCACCAGCTGGTCCAACGGCACTGTTTGTGAAACGTGCATATCTTTTGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
||
| CDS-3UTR CCA 90 bp | TTTTTGAATATTTGGGTGTTCTTTTTATTACTGACAGCTGTGAGCCCTGTCTTGCCAGGCCGGAGCTCTTaGCGGTATATGGGAAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FLNIWVFFLLLTAVSPVLPGRSS*RYMGSW Trigger: CCAGCTTCCCATATACCGCCAAGAGCTCCGGCCTGG...CAAGACAGGGCTCACAGCTGTCAGTAATAAAAAGAACACCCAAATATTCAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000175881.8 |
||
| CDS-3UTR CCA 90 bp | GCTGGCAGGTCACTTGCAGATGAGTTAGATTTTGCATATGTTATAGAGTTCTGTCCAGGTCCAAGTCACTaGGGAACTTATCGTGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: AGRSLADELDFAYVIEFCPGPSH*GTYRGP Trigger: TGGGCCACGATAAGTTCCCCAGTGACTTGGACCTGG...ACAGAACTCTATAACATATGCAAAATCTAACTCATCTGCAAGTGACCTGCCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056974.4 ENSMUST00000105502.8 |
||
| CDS-3UTR CCA 90 bp | CAGATGCCACTGGCTCTACAAAACTTGGCTATAGACAATCCCACAGCACTGGGCAGGATTCCAAATCTATaGCTTTTGAGTTCAGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: QMPLALQNLAIDNPTALGRIPNL*LLSSES Trigger: GCTTTCTGAACTCAAAAGCCATAGATTTGGAATCCT...GCCCAGTGCTGTGGGATTGTCTATAGCCAAGTTTTGTAGAGCCAGTGGCATCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105501.2 |
||
| CDS-3UTR CCA 90 bp | GCTGGCAGGTCACTTGCAGATGAGTTAGATTTTGCATATGTTATAGAGTTCTGTATCATGACGTCGCTGTaGCTGAGTGAGTCTGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: AGRSLADELDFAYVIEFCIMTSL*LSESEA Trigger: TGCTTCAGACTCACTCAGCCACAGCGACGTCATGAT...ACAGAACTCTATAACATATGCAAAATCTAACTCATCTGCAAGTGACCTGCCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056974.4 ENSMUST00000105502.8 |
||
| CDS-3UTR CCA 90 bp | TTTTTGAATATTTGGGTGTTCTTTTTATTACTGACAGCTGTGAGCCCTGTCTTGCCAGGTCCAAGTCACTaGGGAACTTATCGTGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FLNIWVFFLLLTAVSPVLPGPSH*GTYRGP Trigger: TGGGCCACGATAAGTTCCCCAGTGACTTGGACCTGG...CAAGACAGGGCTCACAGCTGTCAGTAATAAAAAGAACACCCAAATATTCAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000175881.8 |
||
| CDS-3UTR TCA 90 bp | GCTGGCAGGTCACTTGCAGATGAGTTAGATTTTGCATATGTTATAGAGTTCTGTATTCCAAGCTCCCATTaGACATGTCCAGGTCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: AGRSLADELDFAYVIEFCIPSSH*TCPGPS Trigger: ACTTGGACCTGGACATGTTCAATGGGAGCTTGGAAT...ACAGAACTCTATAACATATGCAAAATCTAACTCATCTGCAAGTGACCTGCCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056974.4 ENSMUST00000105502.8 |
||
| CDS CCA 90 bp | CAGCTGCGTCGGCGTGCCCCCACTCAGAGCGCCTGCGGCGGACGCTaGCCCCGACCCGAGGTCCTGCCCTCCTGGAGCCAGCAGCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: QLRRRAPTQSACGGR*PRPEVLPSWSQQHG Trigger: GCCATGCTGCTGGCTCCAGGAGGGCAGGACCTCGGGTCGGGGCCAGCGTCCGCCGCAGGCGCTCTGAGTGGGGGCACGCCGACGCAGCTG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000056974.4 ENSMUST00000105501.2 ENSMUST00000105502.8 ENSMUST00000175881.8 |
||
| CDS GCA 90 bp | CCACTCAGAGCGCCTGCGGCGGACGCTGGCCCCGACCCGAGGTCCTaGCCTCCTGGAGCCAGCAGCATGGCCGAATCCTCGAGGAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PLRAPAADAGPDPRS*PPGASSMAESSRSS Trigger: GCTGCTCCTCGAGGATTCGGCCATGCTGCTGGCTCCAGGAGGGCAGGACCTCGGGTCGGGGCCAGCGTCCGCCGCAGGCGCTCTGAGTGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056974.4 ENSMUST00000105501.2 ENSMUST00000105502.8 ENSMUST00000175881.8 |
||
| CDS-3UTR CAA 90 bp | GCTGGCAGCAGTCATGTTTGGAGAGAGCTAGAGCCCTTCCAGATGCAACAGGGCGCGAGGAGCATTTCCTaGGTTGCCCAGAGCCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: AGSSHVWRELEPFQMQQGARSIS*VAQSPQ Trigger: CTGGGGGCTCTGGGCAACCAAGGAAATGCTCCTCGC...GCCCTGTTGCATCTGGAAGGGCTCTAGCTCTCTCCAAACATGACTGCTGCCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105501.2 |
||
| CDS-3UTR CAA 90 bp | AAGCCAGAAAGCCAGTTAGTCCTCCACCAAAATGACACAGTTGCGGGGACAGCTGCGAGGAGCATTTCCTaGGTTGCCCAGAGCCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: KPESQLVLHQNDTVAGTAARSIS*VAQSPQ Trigger: CTGGGGGCTCTGGGCAACCAAGGAAATGCTCCTCGC...AGCTGTCCCCGCAACTGTGTCATTTTGGTGGAGGACTAACTGGCTTTCTGGCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
||
| CDS CCA 90 bp | GACGACCAGGGCCACCACTGCCACCGAGTGAGGATTCCAAATCTATaGCTTTTGAGTTCAGAAAGCTTCCAGCCCGCAGAGCTGTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: DDQGHHCHRVRIPNL*LLSSESFQPAELLL Trigger: CAGCAACAGCTCTGCGGGCTGGAAGCTTTCTGAACTCAAAAGCCATAGATTTGGAATCCTCACTCGGTGGCAGTGGTGGCCCTGGTCGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105501.2 |
||
| CDS-3UTR CAA 90 bp | CAAAAGCTTGCGATGCTCAAGGCCAGACTGGGAACTGATATAACACCTTCCTTCGCGAGGAGCATTTCCTaGGTTGCCCAGAGCCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: QKLAMLKARLGTDITPSFARSIS*VAQSPQ Trigger: CTGGGGGCTCTGGGCAACCAAGGAAATGCTCCTCGC...GAAGGAAGGTGTTATATCAGTTCCCAGTCTGGCCTTGAGCATCGCAAGCTTTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056974.4 ENSMUST00000105502.8 |
||
| CDS-3UTR CAA 90 bp | GCTGGCAGGTCACTTGCAGATGAGTTAGATTTTGCATATGTTATAGAGTTCTGTAGGGCCGCCTTCTTCTaGGCTGCCCGGCCTCGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: AGRSLADELDFAYVIEFCRAAFF*AARPRL Trigger: GAGCCGAGGCCGGGCAGCCAAGAAGAAGGCGGCCCT...ACAGAACTCTATAACATATGCAAAATCTAACTCATCTGCAAGTGACCTGCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056974.4 ENSMUST00000105502.8 |
||
| CDS-3UTR CAA 90 bp | CACCGGCGATGCTTTCCCATTGCATTGTGGCGCACTAACCTGCTTTGCCCATTTCATTCCAAGCTCCCATaGAACATGTCCAGGTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: HRRCFPIALWRTNLLCPFHSKLP*NMSRSK Trigger: CTTGGACCTGGACATGTTCAATGGGAGCTTGGAATG...AAATGGGCAAAGCAGGTTAGTGCGCCACAATGCAATGGGAAAGCATCGCCGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175881.8 |
||
| CDS-3UTR CAA 90 bp | AAGCCAGAAAGCCAGTTAGTCCTCCACCAAAATGACACAGTTGCGGGGACAGCTCATTCCAAGCTCCCATaGAACATGTCCAGGTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: KPESQLVLHQNDTVAGTAHSKLP*NMSRSK Trigger: CTTGGACCTGGACATGTTCAATGGGAGCTTGGAATG...AGCTGTCCCCGCAACTGTGTCATTTTGGTGGAGGACTAACTGGCTTTCTGGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105502.8 |
||
| CDS-3UTR CAA 90 bp | TTTTTGAATATTTGGGTGTTCTTTTTATTACTGACAGCTGTGAGCCCTGTCTTGGCGAGGAGCATTTCCTaGGTTGCCCAGAGCCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: FLNIWVFFLLLTAVSPVLARSIS*VAQSPQ Trigger: CTGGGGGCTCTGGGCAACCAAGGAAATGCTCCTCGC...CAAGACAGGGCTCACAGCTGTCAGTAATAAAAAGAACACCCAAATATTCAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000175881.8 |
||
| CDS-3UTR CAA 90 bp | GCTGGCAGGTCACTTGCAGATGAGTTAGATTTTGCATATGTTATAGAGTTCTGTCATTCCAAGCTCCCATaGAACATGTCCAGGTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: AGRSLADELDFAYVIEFCHSKLP*NMSRSK Trigger: CTTGGACCTGGACATGTTCAATGGGAGCTTGGAATG...ACAGAACTCTATAACATATGCAAAATCTAACTCATCTGCAAGTGACCTGCCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056974.4 ENSMUST00000105502.8 |
||
| CDS GCA 72 bp | CTGCAGCTGCGTCGGCGTGCCCCCACTCAGAGCGCCTaGGGCGGACGCTGGCCCCGACCCGAGGTCCTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: LQLRRRAPTQSA*GGRWPRPEVLP Trigger: GGGCAGGACCTCGGGTCGGGGCCAGCGTCCGCCGCAGGCGCTCTGAGTGGGGGCACGCCGACGCAGCTGCAG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000056974.4 ENSMUST00000105501.2 ENSMUST00000105502.8 ENSMUST00000175881.8 |
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| CDS GCA 72 bp | GCGCCTGCGGCGGACGCTGGCCCCGACCCGAGGTCCTaGCCTCCTGGAGCCAGCAGCATGGCCGAATCCTCG | + |
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Preference number: 6 (lower is better) Translates to: APAADAGPDPRS*PPGASSMAESS Trigger: CGAGGATTCGGCCATGCTGCTGGCTCCAGGAGGGCAGGACCTCGGGTCGGGGCCAGCGTCCGCCGCAGGCGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056974.4 ENSMUST00000105501.2 ENSMUST00000105502.8 ENSMUST00000175881.8 |
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| CDS GCA 72 bp | TGTCCGTCAGCCGCGGAAGCTCCACAGTACACGGCTTaGTCACGGAGGGCGACAGGCTGGCAGAGCTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: CPSAAEAPQYTA*SRRATGWQSCC Trigger: ACAGCAGCTCTGCCAGCCTGTCGCCCTCCGTGAGCAAGCCGTGTACTGTGGAGCTTCCGCGGCTGACGGACA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056974.4 ENSMUST00000105502.8 ENSMUST00000175881.8 |
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| CDS GCA 72 bp | ACGGCTTGCTCACGGAGGGCGACAGGCTGGCAGAGCTaGTGTACAGCATGGGGGACAGGGGTCCATCATCAT | + |
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Preference number: 6 (lower is better) Translates to: TACSRRATGWQS*CTAWGTGVHHH Trigger: ATGATGATGGACCCCTGTCCCCCATGCTGTACAGCAGCTCTGCCAGCCTGTCGCCCTCCGTGAGCAAGCCGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056974.4 ENSMUST00000105502.8 ENSMUST00000175881.8 |
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| CDS TCA 72 bp | GACAACCAGACCCACAGGTTCATGAGACTCTCGAGATaGAGACGACCAGGGCCACCACTGCCACCGAGTGAG | + |
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Preference number: 6 (lower is better) Translates to: DNQTHRFMRLSR*RRPGPPLPPSE Trigger: CTCACTCGGTGGCAGTGGTGGCCCTGGTCGTCTTCATCTCGAGAGTCTCATGAACCTGTGGGTCTGGTTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105501.2 |
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