RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FOXO1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000044167

Ensembl transcript IDs: ENSMUST00000053764.7

Found 198 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTGTTACTCAAGTCCGCTGTGGTGGCGAAGGGCGGGACTCTATCCTaGCGGGCTGTCTGTCTGTCCCCGGCCACAGGGCCAGGCTGTTTG +
Preference number: 1 (lower is better)
Translates to: LLLKSAVVAKGGTLS*RAVCLSPATGPGCL
Trigger: CAAACAGCCTGGCCCTGTGGCCGGGGACAGACAGACAGCCCGTCAGGATAGAGTCCCGCCCTTCGCCACCACAGCGGACTTGAGTAACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR CCA 90 bp GCTGTGTCCCTGAGACCCGTTAGAGTAGCAGGAAGAGGACTGCCCTaGACAGAGCCATCTCAGGAGCAAGGGGAAGAGAGGAATGCCAGC +
Preference number: 1 (lower is better)
Translates to: AVSLRPVRVAGRGLP*TEPSQEQGEERNAS
Trigger: GCTGGCATTCCTCTCTTCCCCTTGCTCCTGAGATGGCTCTGTCCAGGGCAGTCCTCTTCCTGCTACTCTAACGGGTCTCAGGGACACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR GCA 90 bp ACTGCCCTGGACAGAGCCATCTCAGGAGCAAGGGGAAGAGAGGAATaGCAGCACCATCAGCCATTCTTACCCACCAGACTCGCCTTGCCA +
Preference number: 1 (lower is better)
Translates to: TALDRAISGARGREE*QHHQPFLPTRLALP
Trigger: TGGCAAGGCGAGTCTGGTGGGTAAGAATGGCTGATGGTGCTGGCATTCCTCTCTTCCCCTTGCTCCTGAGATGGCTCTGTCCAGGGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR GCA 90 bp CGGGCTGTCTGTCTGTCCCCGGCCACAGGGCCAGGCTGTTTGGTTTaGATAAAGCACAATGCACACTCTACTGAACAATCACTCCCCAGC +
Preference number: 1 (lower is better)
Translates to: RAVCLSPATGPGCLV*IKHNAHSTEQSLPS
Trigger: GCTGGGGAGTGATTGTTCAGTAGAGTGTGCATTGTGCTTTATGCAAACCAAACAGCCTGGCCCTGTGGCCGGGGACAGACAGACAGCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR TCA 90 bp AAGTTCCCCTTTCCTGAGCGACAGACAGAGTTCCCATGGGAACTATaGCAGCGTGACACAGGGCATCATCTGGCAGGCTTCCCTAGAAGG +
Preference number: 1 (lower is better)
Translates to: KFPFPERQTEFPWEL*QRDTGHHLAGFPRR
Trigger: CCTTCTAGGGAAGCCTGCCAGATGATGCCCTGTGTCACGCTGTCATAGTTCCCATGGGAACTCTGTCTGTCGCTCAGGAAAGGGGAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR CCA 90 bp CAATGGCACAGTCCTTATCTACAGGAGCACAAAACCTGCGGACGCTaGGCAAACATCCTGCACAGGAAAGTGCTGCCGCTGTTGCCAAGT +
Preference number: 1 (lower is better)
Translates to: QWHSPYLQEHKTCGR*ANILHRKVLPLLPS
Trigger: ACTTGGCAACAGCGGCAGCACTTTCCTGTGCAGGATGTTTGCCCAGCGTCCGCAGGTTTTGTGCTCCTGTAGATAAGGACTGTGCCATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR TCA 90 bp AGACTGCGGTGGGTAGCGGGGGAGGCAGAGGAACACACCCCAAGCTaGCTGACCTTTCGCTATCTAAACAATAAATCCCTAGAATTCCCC +
Preference number: 1 (lower is better)
Translates to: RLRWVAGEAEEHTPS*LTFRYLNNKSLEFP
Trigger: GGGGAATTCTAGGGATTTATTGTTTAGATAGCGAAAGGTCAGTCAGCTTGGGGTGTGTTCCTCTGCCTCCCCCGCTACCCACCGCAGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR GCA 90 bp AATGATTCCCAATGGCACAGTCCTTATCTACAGGAGCACAAAACCTaGGGACGCTGGGCAAACATCCTGCACAGGAAAGTGCTGCCGCTG +
Preference number: 1 (lower is better)
Translates to: NDSQWHSPYLQEHKT*GRWANILHRKVLPL
Trigger: CAGCGGCAGCACTTTCCTGTGCAGGATGTTTGCCCAGCGTCCGCAGGTTTTGTGCTCCTGTAGATAAGGACTGTGCCATTGGGAATCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR TCA 90 bp TTACACTGTTCAGAGCCAAAGAGAACAGAGGTGGGGACCGAGAAGTaGCAGGATTCTTCAGGACAGAGCCACAAAGCCACCTCCATCGTG +
Preference number: 1 (lower is better)
Translates to: LHCSEPKRTEVGTEK*QDSSGQSHKATSIV
Trigger: CACGATGGAGGTGGCTTTGTGGCTCTGTCCTGAAGAATCCTGTCACTTCTCGGTCCCCACCTCTGTTCTCTTTGGCTCTGAACAGTGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR CCA 90 bp CTTCTCATGCAAACCAGGCCTTCTCATAAAGGCAAAGAGGGGTGCTaGGGTACATCTATTCCTCAAACTGTGGGAGACTGGGAAACACCG +
Preference number: 1 (lower is better)
Translates to: LLMQTRPSHKGKEGC*GTSIPQTVGDWETP
Trigger: CGGTGTTTCCCAGTCTCCCACAGTTTGAGGAATAGATGTACCCCAGCACCCCTCTTTGCCTTTATGAGAAGGCCTGGTTTGCATGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR CCA 90 bp CAATACTGTGGGCTCAAGGGATCCTTGGGCTTACAGCTTTTCTTTTaGTGGCTCCCTGTAATGCCTCGTTTCCCAATTACCTCCTCCCTC +
Preference number: 1 (lower is better)
Translates to: QYCGLKGSLGLQLFF*WLPVMPRFPITSSL
Trigger: GAGGGAGGAGGTAATTGGGAAACGAGGCATTACAGGGAGCCACCAAAAGAAAAGCTGTAAGCCCAAGGATCCCTTGAGCCCACAGTATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR TCA 90 bp CACATTGATCACTGGCTACTTGGCTCTCATGGGTTCTGTGGCAAATaGCCAGGTTCAGTCATTCAGCCGAGGTGCAGGACAGAGATCTTA +
Preference number: 1 (lower is better)
Translates to: HIDHWLLGSHGFCGK*PGSVIQPRCRTEIL
Trigger: TAAGATCTCTGTCCTGCACCTCGGCTGAATGACTGAACCTGGTCATTTGCCACAGAACCCATGAGAGCCAAGTAGCCAGTGATCAATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR GCA 90 bp GGTCTTCTCATGCAAACCAGGCCTTCTCATAAAGGCAAAGAGGGGTaGTGGGGTACATCTATTCCTCAAACTGTGGGAGACTGGGAAACA +
Preference number: 1 (lower is better)
Translates to: GLLMQTRPSHKGKEG*WGTSIPQTVGDWET
Trigger: TGTTTCCCAGTCTCCCACAGTTTGAGGAATAGATGTACCCCAGCACCCCTCTTTGCCTTTATGAGAAGGCCTGGTTTGCATGAGAAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR CCA 90 bp TACTGTGGGCTCAAGGGATCCTTGGGCTTACAGCTTTTCTTTTGGTaGCTCCCTGTAATGCCTCGTTTCCCAATTACCTCCTCCCTCTTT +
Preference number: 1 (lower is better)
Translates to: YCGLKGSLGLQLFFW*LPVMPRFPITSSLF
Trigger: AAAGAGGGAGGAGGTAATTGGGAAACGAGGCATTACAGGGAGCCACCAAAAGAAAAGCTGTAAGCCCAAGGATCCCTTGAGCCCACAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR TCA 90 bp TTAACACCAAGGAAAACAGGGGTTGCTGCTGAAATTGACAGCTTCTaGAGGGAGAGACACCTCCTAGTCATTCAGTGGCATTCAGCAGGT +
Preference number: 1 (lower is better)
Translates to: LTPRKTGVAAEIDSF*RERHLLVIQWHSAG
Trigger: ACCTGCTGAATGCCACTGAATGACTAGGAGGTGTCTCTCCCTTCAGAAGCTGTCAATTTCAGCAGCAACCCCTGTTTTCCTTGGTGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR TCA 90 bp GCGTCCAGTACATTATTGATGGGGCATGTGAACTTGTTAATGGCTTaGCACTGTTCTCTGGCAGGAGTTTATGAGGAATATTTGGGGGCG +
Preference number: 1 (lower is better)
Translates to: ASSTLLMGHVNLLMA*HCSLAGVYEEYLGA
Trigger: CGCCCCCAAATATTCCTCATAAACTCCTGCCAGAGAACAGTGTCAAGCCATTAACAAGTTCACATGCCCCATCAATAATGTACTGGACGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR GCA 90 bp ATGTTTCGTTATTCAAGGGGAGAACAGAAACCACTGGCCAGAGGCTaGAGTTGTCATTACCCTTACATGATGACTTTAGTGCACGCAACC +
Preference number: 1 (lower is better)
Translates to: MFRYSRGEQKPLARG*SCHYPYMMTLVHAT
Trigger: GGTTGCGTGCACTAAAGTCATCATGTAAGGGTAATGACAACTGCAGCCTCTGGCCAGTGGTTTCTGTTCTCCCCTTGAATAACGAAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR TCA 90 bp GTGCAAATAGGCTCCTGTCTCAATTCATCAGTTAGAAAACCAGTTTaGAATGGTTCAGTAAGCTGGGTGGTGGTGGCGCACGCCTTTAAT +
Preference number: 1 (lower is better)
Translates to: VQIGSCLNSSVRKPV*NGSVSWVVVAHAFN
Trigger: ATTAAAGGCGTGCGCCACCACCACCCAGCTTACTGAACCATTTCAAACTGGTTTTCTAACTGATGAATTGAGACAGGAGCCTATTTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR TCA 90 bp TCTTATTCTGCCCCAAAGTTTGACAAGTCCATTAATTCAGCACATTaGTCACTGGCTACTTGGCTCTCATGGGTTCTGTGGCAAATGACC +
Preference number: 1 (lower is better)
Translates to: SYSAPKFDKSINSAH*SLATWLSWVLWQMT
Trigger: GGTCATTTGCCACAGAACCCATGAGAGCCAAGTAGCCAGTGATCAATGTGCTGAATTAATGGACTTGTCAAACTTTGGGGCAGAATAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR CCA 90 bp ACGAGGGGAGAGCTAAGTAACACTACAAACAATTTGGTCTTCTCATaGAAGTGCAATTTGGTCTTCTCATGCAAACCAGGCCTTCTCATA +
Preference number: 1 (lower is better)
Translates to: TRGELSNTTNNLVFS*KCNLVFSCKPGLLI
Trigger: TATGAGAAGGCCTGGTTTGCATGAGAAGACCAAATTGCACTTCCATGAGAAGACCAAATTGTTTGTAGTGTTACTTAGCTCTCCCCTCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR TCA 90 bp TGCATAAAGCACAATGCACACTCTACTGAACAATCACTCCCCAGCTaGAACCACAGAGAAACTTCACTTAAAATCAGTAACTTGGAGAGC +
Preference number: 1 (lower is better)
Translates to: CIKHNAHSTEQSLPS*NHRETSLKISNLES
Trigger: GCTCTCCAAGTTACTGATTTTAAGTGAAGTTTCTCTGTGGTTTCAGCTGGGGAGTGATTGTTCAGTAGAGTGTGCATTGTGCTTTATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR CCA 90 bp GGAAAGACACACACCAAGCCACTTAAGATGATTTATGTACATTTATaGCTTTATACAACGCACAGTAAGGATTGTTCTTGTGTCTGTAAG +
Preference number: 1 (lower is better)
Translates to: GKTHTKPLKMIYVHL*LYTTHSKDCSCVCK
Trigger: CTTACAGACACAAGAACAATCCTTACTGTGCGTTGTATAAAGCCATAAATGTACATAAATCATCTTAAGTGGCTTGGTGTGTGTCTTTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR-3UTR CCA 90 bp GGCGAAGGGCGGGACTCTATCCTGACGGGCTGTCTGTCTGTCCCCGGCCACAGGACACAGGGCATCATCTaGCAGGCTTCCCTAGAAGGC +
Preference number: 2 (lower is better)
Translates to: GEGRDSILTGCLSVPGHRTQGII*QASLEG
Trigger: GCCTTCTAGGGAAGCCTGCCAGATGATGCCCTGTGT...CCTGTGGCCGGGGACAGACAGACAGCCCGTCAGGATAGAGTCCCGCCCTTCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR-3UTR GCA 90 bp GGCGAAGGGCGGGACTCTATCCTGACGGGCTGTCTGTCTGTCCCCGGCCACAGGGTCATTCAGCCGAGGTaGAGGACAGAGATCTTAGTT +
Preference number: 2 (lower is better)
Translates to: GEGRDSILTGCLSVPGHRVIQPR*RTEILV
Trigger: AACTAAGATCTCTGTCCTGCACCTCGGCTGAATGAC...CCTGTGGCCGGGGACAGACAGACAGCCCGTCAGGATAGAGTCCCGCCCTTCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR-3UTR GCA 90 bp TCTATCCTGACGGGCTGTCTGTCTGTCCCCGGCCACAGGGCCAGGCTGTTTGGTTCCTGGAGTTCACTGTaGCCCAGACAACTGCCCATG +
Preference number: 2 (lower is better)
Translates to: SILTGCLSVPGHRARLFGSWSSL*PRQLPM
Trigger: CATGGGCAGTTGTCTGGGGCACAGTGAACTCCAGGA...ACCAAACAGCCTGGCCCTGTGGCCGGGGACAGACAGACAGCCCGTCAGGATAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR-3UTR CCA 90 bp CACAAAACCTGCGGACGCTGGGCAAACATCCTGCACAGGAAAGTGCTGCCGCTGGGTGAAGGGCATCTTTaGACTGCTCCTCAGTTCCTG +
Preference number: 2 (lower is better)
Translates to: HKTCGRWANILHRKVLPLGEGHL*TAPQFL
Trigger: CAGGAACTGAGGAGCAGTCCAAAGATGCCCTTCACC...CAGCGGCAGCACTTTCCTGTGCAGGATGTTTGCCCAGCGTCCGCAGGTTTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR-3UTR GCA 90 bp GGGCTCAAGGGATCCTTGGGCTTACAGCTTTTCTTTTGGTGGCTCCCTGTAATGCAAGAGCAAACACACTaGCACCCCTCTGCGCTGCAG +
Preference number: 2 (lower is better)
Translates to: GLKGSLGLQLFFWWLPVMQEQTH*HPSALQ
Trigger: CTGCAGCGCAGAGGGGTGGCAGTGTGTTTGCTCTTG...CATTACAGGGAGCCACCAAAAGAAAAGCTGTAAGCCCAAGGATCCCTTGAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR-3UTR CCA 90 bp GGGCTCAAGGGATCCTTGGGCTTACAGCTTTTCTTTTGGTGGCTCCCTGTAATGGAGAACAGAAACCACTaGCCAGAGGCTGCAGTTGTC +
Preference number: 2 (lower is better)
Translates to: GLKGSLGLQLFFWWLPVMENRNH*PEAAVV
Trigger: GACAACTGCAGCCTCTGGCCAGTGGTTTCTGTTCTC...CATTACAGGGAGCCACCAAAAGAAAAGCTGTAAGCCCAAGGATCCCTTGAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR-3UTR TCA 90 bp CCCTGTAATGCCTCGTTTCCCAATTACCTCCTCCCTCTTTCCTTCTTCAGCCATAAAGTTCCCCTTTCCTaGGCGACAGACAGAGTTCCC +
Preference number: 2 (lower is better)
Translates to: PCNASFPNYLLPLSFFSHKVPLS*ATDRVP
Trigger: GGGAACTCTGTCTGTCGCTCAGGAAAGGGGAACTTT...ATGGCTGAAGAAGGAAAGAGGGAGGAGGTAATTGGGAAACGAGGCATTACAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR-3UTR GCA 90 bp GACAGACAGAGTTCCCATGGGAACTATGACAGCGTGACACAGGGCATCATCTGGGAAGACTTGGTGCTATaGGCTGTACACAACTCACAG +
Preference number: 2 (lower is better)
Translates to: DRQSSHGNYDSVTQGIIWEDLVL*AVHNSQ
Trigger: CTGTGAGTTGTGTACAGCGCATAGCACCAAGTCTTC...CCAGATGATGCCCTGTGTCACGCTGTCATAGTTCCCATGGGAACTCTGTCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR-3UTR GCA 90 bp CCCTGTAATGCCTCGTTTCCCAATTACCTCCTCCCTCTTTCCTTCTTCAGCCATCAGGAGCAAGGCATCTaGACTGTTACTCAAGTCCGC +
Preference number: 2 (lower is better)
Translates to: PCNASFPNYLLPLSFFSHQEQGI*TVTQVR
Trigger: GCGGACTTGAGTAACAGTGCAGATGCCTTGCTCCTG...ATGGCTGAAGAAGGAAAGAGGGAGGAGGTAATTGGGAAACGAGGCATTACAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR-3UTR CCA 90 bp CAAACACACTGCCACCCCTCTGCGCTGCAGCCAGAGATCCTCTCTGAACAAAATCTATTCCTCAAACTGTaGGAGACTGGGAAACACCGA +
Preference number: 2 (lower is better)
Translates to: QTHCHPSALQPEILSEQNLFLKL*ETGKHR
Trigger: TCGGTGTTTCCCAGTCTCCCACAGTTTGAGGAATAG...ATTTTGTTCAGAGAGGATCTCTGGCTGCAGCGCAGAGGGGTGGCAGTGTGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR-3UTR CCA 90 bp GGGCTCAAGGGATCCTTGGGCTTACAGCTTTTCTTTTGGTGGCTCCCTGTAATGGGGTCAGCCCTCCTATaGAACTCAACCATACAACCA +
Preference number: 2 (lower is better)
Translates to: GLKGSLGLQLFFWWLPVMGSALL*NSTIQP
Trigger: TGGTTGTATGGTTGAGTTCCATAGGAGGGCTGACCC...CATTACAGGGAGCCACCAAAAGAAAAGCTGTAAGCCCAAGGATCCCTTGAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR CAA 90 bp GTGTCTGGCAGGATGTGCTTCAGAGACTTGTTCTTAGTACAGCTCTaGGGGTCAGCCCTCCTATGGAACTCAACCATACAACCACTGTCA +
Preference number: 2 (lower is better)
Translates to: VSGRMCFRDLFLVQL*GSALLWNSTIQPLS
Trigger: TGACAGTGGTTGTATGGTTGAGTTCCATAGGAGGGCTGACCCCAAGAGCTGTACTAAGAACAAGTCTCTGAAGCACATCCTGCCAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR CAA 90 bp ACAATACTGTGGGCTCAAGGGATCCTTGGGCTTACAGCTTTTCTTTaGGTGGCTCCCTGTAATGCCTCGTTTCCCAATTACCTCCTCCCT +
Preference number: 2 (lower is better)
Translates to: TILWAQGILGLTAFL*VAPCNASFPNYLLP
Trigger: AGGGAGGAGGTAATTGGGAAACGAGGCATTACAGGGAGCCACCAAAAGAAAAGCTGTAAGCCCAAGGATCCCTTGAGCCCACAGTATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR-3UTR TCA 90 bp GAACAAAATGTATACTTGGGATCATTTGGCCTGGGAAAGCCACCCTGTCGGCCAGGGTTCTGTGGCAAATaGCCAGGTTCAGTCATTCAG +
Preference number: 2 (lower is better)
Translates to: EQNVYLGSFGLGKPPCRPGFCGK*PGSVIQ
Trigger: CTGAATGACTGAACCTGGTCATTTGCCACAGAACCC...TGGCCGACAGGGTGGCTTTCCCAGGCCAAATGATCCCAAGTATACATTTTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR-3UTR TCA 90 bp AGATCAGGCTGGCCTCTAACTCTGAGAGACCCACTTATCTCTGACTACCAAGTGCTGGCCAACGGTGGGTaGAAGCAGGGACATTTTATT +
Preference number: 2 (lower is better)
Translates to: RSGWPLTLRDPLISDYQVLANGG*KQGHFI
Trigger: AATAAAATGTCCCTGCTTTCACCCACCGTTGGCCAG...CACTTGGTAGTCAGAGATAAGTGGGTCTCTCAGAGTTAGAGGCCAGCCTGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR-3UTR TCA 90 bp CCCTGTAATGCCTCGTTTCCCAATTACCTCCTCCCTCTTTCCTTCTTCAGCCATCAGACCCGGGTTCTTTaGCACCAGGAAATTCTACTC +
Preference number: 2 (lower is better)
Translates to: PCNASFPNYLLPLSFFSHQTRVL*HQEILL
Trigger: GAGTAGAATTTCCTGGTGTCAAAGAACCCGGGTCTG...ATGGCTGAAGAAGGAAAGAGGGAGGAGGTAATTGGGAAACGAGGCATTACAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR-3UTR CCA 90 bp GAACAAAATGTATACTTGGGATCATTTGGCCTGGGAAAGCCACCCTGTCGGCCAAAAGCTGGCCAACGGTaGGTGAAAGCAGGGACATTT +
Preference number: 2 (lower is better)
Translates to: EQNVYLGSFGLGKPPCRPKAGQR*VKAGTF
Trigger: AAATGTCCCTGCTTTCACCCACCGTTGGCCAGCTTT...TGGCCGACAGGGTGGCTTTCCCAGGCCAAATGATCCCAAGTATACATTTTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR-3UTR CCA 90 bp CAAACACACTGCCACCCCTCTGCGCTGCAGCCAGAGATCCTCTCTGAACAAAATCAGACTCTAGGCCAGTaGTTCTCAACTTTCCTAATG +
Preference number: 2 (lower is better)
Translates to: QTHCHPSALQPEILSEQNQTLGQ*FSTFLM
Trigger: CATTAGGAAAGTTGAGAACCACTGGCCTAGAGTCTG...ATTTTGTTCAGAGAGGATCTCTGGCTGCAGCGCAGAGGGGTGGCAGTGTGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR-3UTR CCA 90 bp GGGCTCAAGGGATCCTTGGGCTTACAGCTTTTCTTTTGGTGGCTCCCTGTAATGCCATATAGATCAGGCTaGCCTCTAACTCTGAGAGAC +
Preference number: 2 (lower is better)
Translates to: GLKGSLGLQLFFWWLPVMPYRSG*PLTLRD
Trigger: GTCTCTCAGAGTTAGAGGCCAGCCTGATCTATATGG...CATTACAGGGAGCCACCAAAAGAAAAGCTGTAAGCCCAAGGATCCCTTGAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR-3UTR CCA 90 bp TCGTCTGCTTGTCTGGTAGAGGGAAAAGAGCAGAACCTTCTTTTAAAGCAGTCATGGGATCATTTGGCCTaGGAAAGCCACCCTGTCGGC +
Preference number: 2 (lower is better)
Translates to: SSACLVEGKEQNLLLKQSWDHLA*ESHPVG
Trigger: GCCGACAGGGTGGCTTTCCCAGGCCAAATGATCCCA...TGACTGCTTTAAAAGAAGGTTCTGCTCTTTTCCCTCTACCAGACAAGCAGACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR-3UTR TCA 90 bp CAAACACACTGCCACCCCTCTGCGCTGCAGCCAGAGATCCTCTCTGAACAAAATCGGAGCTCACACGTTTaGTGTTTGTTTTCAAAACAG +
Preference number: 2 (lower is better)
Translates to: QTHCHPSALQPEILSEQNRSSHV*CLFSKQ
Trigger: CTGTTTTGAAAACAAACATCAAACGTGTGAGCTCCG...ATTTTGTTCAGAGAGGATCTCTGGCTGCAGCGCAGAGGGGTGGCAGTGTGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR-3UTR TCA 90 bp CCCTGTAATGCCTCGTTTCCCAATTACCTCCTCCCTCTTTCCTTCTTCAGCCATCAATCACTCCCCAGCTaGAACCACAGAGAAACTTCA +
Preference number: 2 (lower is better)
Translates to: PCNASFPNYLLPLSFFSHQSLPS*NHRETS
Trigger: TGAAGTTTCTCTGTGGTTTCAGCTGGGGAGTGATTG...ATGGCTGAAGAAGGAAAGAGGGAGGAGGTAATTGGGAAACGAGGCATTACAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR-3UTR GCA 90 bp AGATCAGGCTGGCCTCTAACTCTGAGAGACCCACTTATCTCTGACTACCAAGTGAAAGGCAAAGAGGGGTaGTGGGGTACATCTATTCCT +
Preference number: 2 (lower is better)
Translates to: RSGWPLTLRDPLISDYQVKGKEG*WGTSIP
Trigger: AGGAATAGATGTACCCCAGCACCCCTCTTTGCCTTT...CACTTGGTAGTCAGAGATAAGTGGGTCTCTCAGAGTTAGAGGCCAGCCTGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR CAA 90 bp CAAAGTTGCTCTTTCTTCCCGGAGGCCGAGAATCTACTCCTTCAGTaGGCAGCGTCCAGTACATTATTGATGGGGCATGTGAACTTGTTA +
Preference number: 2 (lower is better)
Translates to: QSCSFFPEAENLLLQ*AASSTLLMGHVNLL
Trigger: TAACAAGTTCACATGCCCCATCAATAATGTACTGGACGCTGCCAACTGAAGGAGTAGATTCTCGGCCTCCGGGAAGAAAGAGCAACTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR-3UTR TCA 90 bp GACAGACAGAGTTCCCATGGGAACTATGACAGCGTGACACAGGGCATCATCTGGGCCCCCAAATACCTCTaGTTTCACAAATTTATAAGC +
Preference number: 2 (lower is better)
Translates to: DRQSSHGNYDSVTQGIIWAPKYL*FHKFIS
Trigger: GCTTATAAATTTGTGAAATCAGAGGTATTTGGGGGC...CCAGATGATGCCCTGTGTCACGCTGTCATAGTTCCCATGGGAACTCTGTCTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR-3UTR GCA 90 bp AGATCAGGCTGGCCTCTAACTCTGAGAGACCCACTTATCTCTGACTACCAAGTGAGTCCTGTTTTGGAGTaGCCAAACAAAGGTAGTCAG +
Preference number: 2 (lower is better)
Translates to: RSGWPLTLRDPLISDYQVSPVLE*PNKGSQ
Trigger: CTGACTACCTTTGTTTGGGCACTCCAAAACAGGACT...CACTTGGTAGTCAGAGATAAGTGGGTCTCTCAGAGTTAGAGGCCAGCCTGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR-3UTR GCA 90 bp CCCTGTAATGCCTCGTTTCCCAATTACCTCCTCCCTCTTTCCTTCTTCAGCCATGTGTCTGGCAGGATGTaGTTCAGAGACTTGTTCTTA +
Preference number: 2 (lower is better)
Translates to: PCNASFPNYLLPLSFFSHVSGRM*FRDLFL
Trigger: TAAGAACAAGTCTCTGAAGCACATCCTGCCAGACAC...ATGGCTGAAGAAGGAAAGAGGGAGGAGGTAATTGGGAAACGAGGCATTACAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR CAA 90 bp AGGGGTCATTCCTCACACACTGAGAACCATTGCTCTCTAGACGGTTaGCTAAGTTTAGATTGCACTTCTTCACATCAGGGGCCATGGTTT +
Preference number: 2 (lower is better)
Translates to: RGHSSHTENHCSLDG*LSLDCTSSHQGPWF
Trigger: AAACCATGGCCCCTGATGTGAAGAAGTGCAATCTAAACTTAGCAAACCGTCTAGAGAGCAATGGTTCTCAGTGTGTGAGGAATGACCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR CAA 90 bp AATGATGTAAGGTTTACTGTGTCTGGCAGGATGTGCTTCAGAGACTaGTTCTTAGTACAGCTCTTGGGGTCAGCCCTCCTATGGAACTCA +
Preference number: 2 (lower is better)
Translates to: NDVRFTVSGRMCFRD*FLVQLLGSALLWNS
Trigger: TGAGTTCCATAGGAGGGCTGACCCCAAGAGCTGTACTAAGAACAAGTCTCTGAAGCACATCCTGCCAGACACAGTAAACCTTACATCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR-3UTR TCA 90 bp GGGCTCAAGGGATCCTTGGGCTTACAGCTTTTCTTTTGGTGGCTCCCTGTAATGAAGCACTCCAGGATCTaGAAGTCTTTTCTGCAATTA +
Preference number: 2 (lower is better)
Translates to: GLKGSLGLQLFFWWLPVMKHSRI*KSFLQL
Trigger: TAATTGCAGAAAAGACTTTCAGATCCTGGAGTGCTT...CATTACAGGGAGCCACCAAAAGAAAAGCTGTAAGCCCAAGGATCCCTTGAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR-3UTR TCA 90 bp GGGCTCAAGGGATCCTTGGGCTTACAGCTTTTCTTTTGGTGGCTCCCTGTAATGACACACCAAAGGAAATaGATCAAACAAGGCTGCATA +
Preference number: 2 (lower is better)
Translates to: GLKGSLGLQLFFWWLPVMTHQRK*IKQGCI
Trigger: TATGCAGCCTTGTTTGATTCATTTCCTTTGGTGTGT...CATTACAGGGAGCCACCAAAAGAAAAGCTGTAAGCCCAAGGATCCCTTGAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR-3UTR GCA 90 bp GGGCTCAAGGGATCCTTGGGCTTACAGCTTTTCTTTTGGTGGCTCCCTGTAATGGGTTTCAGGGCTTCCTaGTCATCAGGATATATTATT +
Preference number: 2 (lower is better)
Translates to: GLKGSLGLQLFFWWLPVMGFRAS*SSGYII
Trigger: AATAATATATCCTGATGAGCAGGAAGCCCTGAAACC...CATTACAGGGAGCCACCAAAAGAAAAGCTGTAAGCCCAAGGATCCCTTGAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR-3UTR CCA 90 bp TCTACTTGGAGGAGTTCATTTCTAAAACAAGTCCTGTTTTGGAGTGCCCAAACAAAAACCTGCGGACGCTaGGCAAACATCCTGCACAGG +
Preference number: 2 (lower is better)
Translates to: STWRSSFLKQVLFWSAQTKTCGR*ANILHR
Trigger: CCTGTGCAGGATGTTTGCCCAGCGTCCGCAGGTTTT...TGTTTGGGCACTCCAAAACAGGACTTGTTTTAGAAATGAACTCCTCCAAGTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR-3UTR CCA 90 bp GGGCTCAAGGGATCCTTGGGCTTACAGCTTTTCTTTTGGTGGCTCCCTGTAATGCATGCTTATAATTACTaGCCTAAATGGGGTTCCAGA +
Preference number: 2 (lower is better)
Translates to: GLKGSLGLQLFFWWLPVMHAYNY*PKWGSR
Trigger: TCTGGAACCCCATTTAGGCCAGTAATTATAAGCATG...CATTACAGGGAGCCACCAAAAGAAAAGCTGTAAGCCCAAGGATCCCTTGAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR-3UTR TCA 90 bp GGCTGGTTTCCAAGTTTACTGCCTTCATTTTTAACTAATCCTGCCACTGTCTGTCGCTGTTGCCAAGTCTaGGGAAAGGAGAAAGGACTT +
Preference number: 2 (lower is better)
Translates to: GWFPSLLPSFLTNPATVCRCCQV*GKEKGL
Trigger: AAGTCCTTTCTCCTTTCCTCAGACTTGGCAACAGCG...ACAGACAGTGGCAGGATTAGTTAAAAATGAAGGCAGTAAACTTGGAAACCAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR-3UTR GCA 90 bp GAACAAAATGTATACTTGGGATCATTTGGCCTGGGAAAGCCACCCTGTCGGCCATTGCTAAGTTTAGATTaGACTTCTTCACATCAGGGG +
Preference number: 2 (lower is better)
Translates to: EQNVYLGSFGLGKPPCRPLLSLD*TSSHQG
Trigger: CCCCTGATGTGAAGAAGTGCAATCTAAACTTAGCAA...TGGCCGACAGGGTGGCTTTCCCAGGCCAAATGATCCCAAGTATACATTTTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR-3UTR TCA 90 bp TCGTCTGCTTGTCTGGTAGAGGGAAAAGAGCAGAACCTTCTTTTAAAGCAGTCAGCCAGAGATCCTCTCTaGACAAAATGTATACTTGGG +
Preference number: 2 (lower is better)
Translates to: SSACLVEGKEQNLLLKQSARDPL*TKCILG
Trigger: CCCAAGTATACATTTTGTTCAGAGAGGATCTCTGGC...TGACTGCTTTAAAAGAAGGTTCTGCTCTTTTCCCTCTACCAGACAAGCAGACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR-3UTR CCA 90 bp GAACAAAATGTATACTTGGGATCATTTGGCCTGGGAAAGCCACCCTGTCGGCCAAATTTGGTCTTCTCATaGAAGTGCAATTTGGTCTTC +
Preference number: 2 (lower is better)
Translates to: EQNVYLGSFGLGKPPCRPNLVFS*KCNLVF
Trigger: GAAGACCAAATTGCACTTCCATGAGAAGACCAAATT...TGGCCGACAGGGTGGCTTTCCCAGGCCAAATGATCCCAAGTATACATTTTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR-3UTR CCA 90 bp GAACAAAATGTATACTTGGGATCATTTGGCCTGGGAAAGCCACCCTGTCGGCCAACACTACAAACAATTTaGTCTTCTCATGGAAGTGCA +
Preference number: 2 (lower is better)
Translates to: EQNVYLGSFGLGKPPCRPTLQTI*SSHGSA
Trigger: TGCACTTCCATGAGAAGACCAAATTGTTTGTAGTGT...TGGCCGACAGGGTGGCTTTCCCAGGCCAAATGATCCCAAGTATACATTTTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR CAA 90 bp AAGACCTGTACAAAGCTGGCACTTAATCTTATTCTGCCCCAAAGTTaGACAAGTCCATTAATTCAGCACATTGATCACTGGCTACTTGGC +
Preference number: 2 (lower is better)
Translates to: KTCTKLALNLILPQS*TSPLIQHIDHWLLG
Trigger: GCCAAGTAGCCAGTGATCAATGTGCTGAATTAATGGACTTGTCAAACTTTGGGGCAGAATAAGATTAAGTGCCAGCTTTGTACAGGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR-3UTR TCA 90 bp TCGTCTGCTTGTCTGGTAGAGGGAAAAGAGCAGAACCTTCTTTTAAAGCAGTCAAGAGATCTTAGTTCATaGCTTCTCACTGTAGCAGAA +
Preference number: 2 (lower is better)
Translates to: SSACLVEGKEQNLLLKQSRDLSS*LLTVAE
Trigger: TTCTGCTACAGTGAGAAGTCATGAACTAAGATCTCT...TGACTGCTTTAAAAGAAGGTTCTGCTCTTTTCCCTCTACCAGACAAGCAGACGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR-3UTR CCA 90 bp AGTCTTTTCACAGAGCAATCATGTACAATAATAGACCAGAAAGCGAACATTCTCATACGAAGCCTTTCCTaGAGTTCACTGTGCCCCAGA +
Preference number: 2 (lower is better)
Translates to: SLFTEQSCTIIDQKANILIRSLS*SSLCPR
Trigger: TCTGGGGCACAGTGAACTCCAGGAAAGGCTTCGTAT...GAGAATGTTCGCTTTCTGGTCTATTATTGTACATGATTGCTCTGTGAAAAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR-3UTR CCA 90 bp TCGTCTGCTTGTCTGGTAGAGGGAAAAGAGCAGAACCTTCTTTTAAAGCAGTCATTTTCTGCAATTACATaGTGTAGTGAGTTTGGCACT +
Preference number: 2 (lower is better)
Translates to: SSACLVEGKEQNLLLKQSFSAIT*CSEFGT
Trigger: AGTGCCAAACTCACTACACCATGTAATTGCAGAAAA...TGACTGCTTTAAAAGAAGGTTCTGCTCTTTTCCCTCTACCAGACAAGCAGACGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR-3UTR CCA 90 bp TCTACTTGGAGGAGTTCATTTCTAAAACAAGTCCTGTTTTGGAGTGCCCAAACAAGACCTGTACAAAGCTaGCACTTAATCTTATTCTGC +
Preference number: 2 (lower is better)
Translates to: STWRSSFLKQVLFWSAQTRPVQS*HLILFC
Trigger: GCAGAATAAGATTAAGTGCCAGCTTTGTACAGGTCT...TGTTTGGGCACTCCAAAACAGGACTTGTTTTAGAAATGAACTCCTCCAAGTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR CAA 90 bp CACAACTATGTGCACGAGCCTCAGGGTTTAGCTTGTCTTTTGATTTaGGGTTATATATATTGGCCTTTGGGTACTACATTTTCAAAGAAC +
Preference number: 2 (lower is better)
Translates to: HNYVHEPQGLACLLI*GYIYWPLGTTFSKN
Trigger: GTTCTTTGAAAATGTAGTACCCAAAGGCCAATATATATAACCCAAAATCAAAAGACAAGCTAAACCCTGAGGCTCGTGCACATAGTTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR TCA 72 bp AAGTCCGCTGTGGTGGCGAAGGGCGGGACTCTATCCTaGCGGGCTGTCTGTCTGTCCCCGGCCACAGGGCCA +
Preference number: 3 (lower is better)
Translates to: KSAVVAKGGTLS*RAVCLSPATGP
Trigger: TGGCCCTGTGGCCGGGGACAGACAGACAGCCCGTCAGGATAGAGTCCCGCCCTTCGCCACCACAGCGGACTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR-3UTR CAA 90 bp GGCGAAGGGCGGGACTCTATCCTGACGGGCTGTCTGTCTGTCCCCGGCCACAGGAAAGGGCCAGGAACGTaGAGTGTGCAAGTACTAATT +
Preference number: 3 (lower is better)
Translates to: GEGRDSILTGCLSVPGHRKGPGT*SVQVLI
Trigger: AATTAGTACTTGCACACTCAACGTTCCTGGCCCTTT...CCTGTGGCCGGGGACAGACAGACAGCCCGTCAGGATAGAGTCCCGCCCTTCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR-3UTR CAA 90 bp GGCGAAGGGCGGGACTCTATCCTGACGGGCTGTCTGTCTGTCCCCGGCCACAGGTCGGAGCTCACACGTTaGATGTTTGTTTTCAAAACA +
Preference number: 3 (lower is better)
Translates to: GEGRDSILTGCLSVPGHRSELTR*MFVFKT
Trigger: TGTTTTGAAAACAAACATCAAACGTGTGAGCTCCGA...CCTGTGGCCGGGGACAGACAGACAGCCCGTCAGGATAGAGTCCCGCCCTTCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR GCA 72 bp GACAGAGCCATCTCAGGAGCAAGGGGAAGAGAGGAATaGCAGCACCATCAGCCATTCTTACCCACCAGACTC +
Preference number: 3 (lower is better)
Translates to: DRAISGARGREE*QHHQPFLPTRL
Trigger: GAGTCTGGTGGGTAAGAATGGCTGATGGTGCTGGCATTCCTCTCTTCCCCTTGCTCCTGAGATGGCTCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR CCA 72 bp AGTCCTTATCTACAGGAGCACAAAACCTGCGGACGCTaGGCAAACATCCTGCACAGGAAAGTGCTGCCGCTG +
Preference number: 3 (lower is better)
Translates to: SPYLQEHKTCGR*ANILHRKVLPL
Trigger: CAGCGGCAGCACTTTCCTGTGCAGGATGTTTGCCCAGCGTCCGCAGGTTTTGTGCTCCTGTAGATAAGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR CCA 72 bp CATGGGAACTATGACAGCGTGACACAGGGCATCATCTaGCAGGCTTCCCTAGAAGGCTGTAAGCACGTGGCA +
Preference number: 3 (lower is better)
Translates to: HGNYDSVTQGII*QASLEGCKHVA
Trigger: TGCCACGTGCTTACAGCCTTCTAGGGAAGCCTGCCAGATGATGCCCTGTGTCACGCTGTCATAGTTCCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR TCA 72 bp TTTCCTGAGCGACAGACAGAGTTCCCATGGGAACTATaGCAGCGTGACACAGGGCATCATCTGGCAGGCTTC +
Preference number: 3 (lower is better)
Translates to: FPERQTEFPWEL*QRDTGHHLAGF
Trigger: GAAGCCTGCCAGATGATGCCCTGTGTCACGCTGTCATAGTTCCCATGGGAACTCTGTCTGTCGCTCAGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR TCA 72 bp TCAGAGCCAAAGAGAACAGAGGTGGGGACCGAGAAGTaGCAGGATTCTTCAGGACAGAGCCACAAAGCCACC +
Preference number: 3 (lower is better)
Translates to: SEPKRTEVGTEK*QDSSGQSHKAT
Trigger: GGTGGCTTTGTGGCTCTGTCCTGAAGAATCCTGTCACTTCTCGGTCCCCACCTCTGTTCTCTTTGGCTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR-3UTR CAA 90 bp TCTATCCTGACGGGCTGTCTGTCTGTCCCCGGCCACAGGGCCAGGCTGTTTGGTAACACTACAAACAATTaGGTCTTCTCATGGAAGTGC +
Preference number: 3 (lower is better)
Translates to: SILTGCLSVPGHRARLFGNTTNN*VFSWKC
Trigger: GCACTTCCATGAGAAGACCAAATTGTTTGTAGTGTT...ACCAAACAGCCTGGCCCTGTGGCCGGGGACAGACAGACAGCCCGTCAGGATAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR GCA 72 bp CAATGGCACAGTCCTTATCTACAGGAGCACAAAACCTaGGGACGCTGGGCAAACATCCTGCACAGGAAAGTG +
Preference number: 3 (lower is better)
Translates to: QWHSPYLQEHKT*GRWANILHRKV
Trigger: CACTTTCCTGTGCAGGATGTTTGCCCAGCGTCCGCAGGTTTTGTGCTCCTGTAGATAAGGACTGTGCCATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR GCA 72 bp ACTTCTCAGATAGCAATGGAACAGGAGCAAGGCATCTaGACTGTTACTCAAGTCCGCTGTGGTGGCGAAGGG +
Preference number: 3 (lower is better)
Translates to: TSQIAMEQEQGI*TVTQVRCGGEG
Trigger: CCCTTCGCCACCACAGCGGACTTGAGTAACAGTGCAGATGCCTTGCTCCTGTTCCATTGCTATCTGAGAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR-3UTR CAA 90 bp GACAGACAGAGTTCCCATGGGAACTATGACAGCGTGACACAGGGCATCATCTGGTTGATCACTGGCTACTaGGCTCTCATGGGTTCTGTG +
Preference number: 3 (lower is better)
Translates to: DRQSSHGNYDSVTQGIIWLITGY*ALMGSV
Trigger: CACAGAACCCATGAGAGCCAAGTAGCCAGTGATCAA...CCAGATGATGCCCTGTGTCACGCTGTCATAGTTCCCATGGGAACTCTGTCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR TCA 72 bp ATTCTTCAGGACAGAGCCACAAAGCCACCTCCATCGTaGCAAAAGCCAACAGCTCAGAGTAGTAGGAGGCGA +
Preference number: 3 (lower is better)
Translates to: ILQDRATKPPPS*QKPTAQSSRRR
Trigger: TCGCCTCCTACTACTCTGAGCTGTTGGCTTTTGTCACGATGGAGGTGGCTTTGTGGCTCTGTCCTGAAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR TCA 72 bp AGAGGGAGGAGGAAAGGGAGACAGACCCGGGTTCTTTaGCACCAGGAAATTCTACTCTGTTTGAAGGAGGCT +
Preference number: 3 (lower is better)
Translates to: RGRRKGRQTRVL*HQEILLCLKEA
Trigger: AGCCTCCTTCAAACAGAGTAGAATTTCCTGGTGTCAAAGAACCCGGGTCTGTCTCCCTTTCCTCCTCCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR GCA 72 bp TGTCTGTCCCCGGCCACAGGGCCAGGCTGTTTGGTTTaGATAAAGCACAATGCACACTCTACTGAACAATCA +
Preference number: 3 (lower is better)
Translates to: CLSPATGPGCLV*IKHNAHSTEQS
Trigger: TGATTGTTCAGTAGAGTGTGCATTGTGCTTTATGCAAACCAAACAGCCTGGCCCTGTGGCCGGGGACAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR CCA 72 bp CAAACCAGGCCTTCTCATAAAGGCAAAGAGGGGTGCTaGGGTACATCTATTCCTCAAACTGTGGGAGACTGG +
Preference number: 3 (lower is better)
Translates to: QTRPSHKGKEGC*GTSIPQTVGDW
Trigger: CCAGTCTCCCACAGTTTGAGGAATAGATGTACCCCAGCACCCCTCTTTGCCTTTATGAGAAGGCCTGGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR CCA 72 bp TGCAGCCAGAGATCCTCTCTGAACAAAATGTATACTTaGGATCATTTGGCCTGGGAAAGCCACCCTGTCGGC +
Preference number: 3 (lower is better)
Translates to: CSQRSSLNKMYT*DHLAWESHPVG
Trigger: GCCGACAGGGTGGCTTTCCCAGGCCAAATGATCCCAAGTATACATTTTGTTCAGAGAGGATCTCTGGCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR CCA 72 bp GGGCTCAAGGGATCCTTGGGCTTACAGCTTTTCTTTTaGTGGCTCCCTGTAATGCCTCGTTTCCCAATTACC +
Preference number: 3 (lower is better)
Translates to: GLKGSLGLQLFF*WLPVMPRFPIT
Trigger: GGTAATTGGGAAACGAGGCATTACAGGGAGCCACCAAAAGAAAAGCTGTAAGCCCAAGGATCCCTTGAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR GCA 72 bp ATGCAAACCAGGCCTTCTCATAAAGGCAAAGAGGGGTaGTGGGGTACATCTATTCCTCAAACTGTGGGAGAC +
Preference number: 3 (lower is better)
Translates to: MQTRPSHKGKEG*WGTSIPQTVGD
Trigger: GTCTCCCACAGTTTGAGGAATAGATGTACCCCAGCACCCCTCTTTGCCTTTATGAGAAGGCCTGGTTTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR CCA 72 bp GAGCCACCTCCACGAACTTCTAGATGCACAATACTGTaGGCTCAAGGGATCCTTGGGCTTACAGCTTTTCTT +
Preference number: 3 (lower is better)
Translates to: EPPPRTSRCTIL*AQGILGLTAFL
Trigger: AAGAAAAGCTGTAAGCCCAAGGATCCCTTGAGCCCACAGTATTGTGCATCTAGAAGTTCGTGGAGGTGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR-3UTR CAA 90 bp ACTTTCCTGCCCAAAGGGCCAGGAACGTTGAGTGTGCAAGTACTAATTACAATGAAAGTGCTGCCGCTGTaGCCAAGTCTGAGGAAAGGA +
Preference number: 3 (lower is better)
Translates to: TFLPKGPGTLSVQVLITMKVLPL*PSLRKG
Trigger: TCCTTTCCTCAGACTTGGCAACAGCGGCAGCACTTT...CATTGTAATTAGTACTTGCACACTCAACGTTCCTGGCCCTTTGGGCAGGAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR-3UTR CAA 90 bp GAACAAAATGTATACTTGGGATCATTTGGCCTGGGAAAGCCACCCTGTCGGCCACAAGGAAAACAGGGGTaGCTGCTGAAATTGACAGCT +
Preference number: 3 (lower is better)
Translates to: EQNVYLGSFGLGKPPCRPQGKQG*LLKLTA
Trigger: AGCTGTCAATTTCAGCAGCAACCCCTGTTTTCCTTG...TGGCCGACAGGGTGGCTTTCCCAGGCCAAATGATCCCAAGTATACATTTTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR-3UTR CAA 90 bp CCCTGTAATGCCTCGTTTCCCAATTACCTCCTCCCTCTTTCCTTCTTCAGCCATACAGGGCCAGGCTGTTaGGTTTGCATAAAGCACAAT +
Preference number: 3 (lower is better)
Translates to: PCNASFPNYLLPLSFFSHTGPGC*VCIKHN
Trigger: ATTGTGCTTTATGCAAACCAAACAGCCTGGCCCTGT...ATGGCTGAAGAAGGAAAGAGGGAGGAGGTAATTGGGAAACGAGGCATTACAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR TCA 72 bp GGCTCCTGTCTCAATTCATCAGTTAGAAAACCAGTTTaGAATGGTTCAGTAAGCTGGGTGGTGGTGGCGCAC +
Preference number: 3 (lower is better)
Translates to: GSCLNSSVRKPV*NGSVSWVVVAH
Trigger: GTGCGCCACCACCACCCAGCTTACTGAACCATTTCAAACTGGTTTTCTAACTGATGAATTGAGACAGGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR TCA 72 bp GCCCCAAAGTTTGACAAGTCCATTAATTCAGCACATTaGTCACTGGCTACTTGGCTCTCATGGGTTCTGTGG +
Preference number: 3 (lower is better)
Translates to: APKFDKSINSAH*SLATWLSWVLW
Trigger: CCACAGAACCCATGAGAGCCAAGTAGCCAGTGATCAATGTGCTGAATTAATGGACTTGTCAAACTTTGGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR GCA 72 bp CCCTCAAGGGGTCATTCCTCACACACTGAGAACCATTaGTCTCTAGACGGTTTGCTAAGTTTAGATTGCACT +
Preference number: 3 (lower is better)
Translates to: PSRGHSSHTENH*SLDGLLSLDCT
Trigger: AGTGCAATCTAAACTTAGCAAACCGTCTAGAGAGCAATGGTTCTCAGTGTGTGAGGAATGACCCCTTGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR CCA 72 bp TTTAGATTGCACTTCTTCACATCAGGGGCCATGGTTTaGTCATACGCCATTAACACTGGGGTTGACGGTCTA +
Preference number: 3 (lower is better)
Translates to: FRLHFFTSGAMV*SYAINTGVDGL
Trigger: TAGACCGTCAACCCCAGTGTTAATGGCGTATGACCAAACCATGGCCCCTGATGTGAAGAAGTGCAATCTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR TCA 72 bp CTGGCAGGAGTTTATGAGGAATATTTGGGGGCGATTTaGATGTCTTCTCAGTGTGAACTTCCTCAGGTACCA +
Preference number: 3 (lower is better)
Translates to: LAGVYEEYLGAI*MSSQCELPQVP
Trigger: TGGTACCTGAGGAAGTTCACACTGAGAAGACATTCAAATCGCCCCCAAATATTCCTCATAAACTCCTGCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR GCA 72 bp GAGGAGTTCATTTCTAAAACAAGTCCTGTTTTGGAGTaGCCAAACAAAGGTAGTCAGACGAGCAGTGGCTCA +
Preference number: 3 (lower is better)
Translates to: EEFISKTSPVLE*PNKGSQTSSGS
Trigger: TGAGCCACTGCTCGTCTGACTACCTTTGTTTGGGCACTCCAAAACAGGACTTGTTTTAGAAATGAACTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR GCA 72 bp TATTCAAGGGGAGAACAGAAACCACTGGCCAGAGGCTaGAGTTGTCATTACCCTTACATGATGACTTTAGTG +
Preference number: 3 (lower is better)
Translates to: YSRGEQKPLARG*SCHYPYMMTLV
Trigger: CACTAAAGTCATCATGTAAGGGTAATGACAACTGCAGCCTCTGGCCAGTGGTTTCTGTTCTCCCCTTGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR GCA 72 bp CTCAAATACCAGGAGTTAAGAAGCCTTTTGCAAAGTTaGTCTTTCTTCCCGGAGGCCGAGAATCTACTCCTT +
Preference number: 3 (lower is better)
Translates to: LKYQELRSLLQS*SFFPEAENLLL
Trigger: AAGGAGTAGATTCTCGGCCTCCGGGAAGAAAGAGCAACTTTGCAAAAGGCTTCTTAACTCCTGGTATTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR TCA 72 bp CTGTTTGGTTTGCATAAAGCACAATGCACACTCTACTaGACAATCACTCCCCAGCTGAAACCACAGAGAAAC +
Preference number: 3 (lower is better)
Translates to: LFGLHKAQCTLY*TITPQLKPQRN
Trigger: GTTTCTCTGTGGTTTCAGCTGGGGAGTGATTGTTCAGTAGAGTGTGCATTGTGCTTTATGCAAACCAAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR TCA 72 bp TCACTGCATCCCAGTTATAGGCCCAGAAGCCTGTCCTaGGCACTTTTAAATGATGTAAGGTTTACTGTGTCT +
Preference number: 3 (lower is better)
Translates to: SLHPSYRPRSLS*ALLNDVRFTVS
Trigger: AGACACAGTAAACCTTACATCATTTAAAAGTGCTCAGGACAGGCTTCTGGGCCTATAACTGGGATGCAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR TCA 72 bp TCTTTCCTTCTTCAGCCATTTCCAAGTCAGTGGACTTaGAAGCACCTTAAGCCTGTGTATGCACATCGTCAT +
Preference number: 3 (lower is better)
Translates to: SFLLQPFPSQWT*KHLKPVYAHRH
Trigger: ATGACGATGTGCATACACAGGCTTAAGGTGCTTTCAAGTCCACTGACTTGGAAATGGCTGAAGAAGGAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR TCA 72 bp TGCCAGTCTGGGATGAGAGGAATGTCCTCAAACTGTTaGGCCAAAGTCTTGTCACTTTATTTCAGCAACGAA +
Preference number: 3 (lower is better)
Translates to: CQSGMRGMSSNC*AKVLSLYFSNE
Trigger: TTCGTTGCTGAAATAAAGTGACAAGACTTTGGCTCAACAGTTTGAGGACATTCCTCTCATCCCAGACTGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR GCA 72 bp AACCATTGCTCTCTAGACGGTTTGCTAAGTTTAGATTaGACTTCTTCACATCAGGGGCCATGGTTTGGTCAT +
Preference number: 3 (lower is better)
Translates to: NHCSLDGLLSLD*TSSHQGPWFGH
Trigger: ATGACCAAACCATGGCCCCTGATGTGAAGAAGTGCAATCTAAACTTAGCAAACCGTCTAGAGAGCAATGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR CCA 72 bp GACACTGTTCTCTGGCAGGAGTTTATGAGGAATATTTaGGGGCGATTTGAATGTCTTCTCAGTGTGAACTTC +
Preference number: 3 (lower is better)
Translates to: DTVLWQEFMRNI*GRFECLLSVNF
Trigger: GAAGTTCACACTGAGAAGACATTCAAATCGCCCCCAAATATTCCTCATAAACTCCTGCCAGAGAACAGTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR-3UTR CAA 90 bp ACTTTCCTGCCCAAAGGGCCAGGAACGTTGAGTGTGCAAGTACTAATTACAATGATTCTGCCCCAAAGTTaGACAAGTCCATTAATTCAG +
Preference number: 3 (lower is better)
Translates to: TFLPKGPGTLSVQVLITMILPQS*TSPLIQ
Trigger: CTGAATTAATGGACTTGTCAAACTTTGGGGCAGAAT...CATTGTAATTAGTACTTGCACACTCAACGTTCCTGGCCCTTTGGGCAGGAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR-3UTR CAA 90 bp TCGTCTGCTTGTCTGGTAGAGGGAAAAGAGCAGAACCTTCTTTTAAAGCAGTCATCATGGAAGTGCAATTaGGTCTTCTCATGCAAACCA +
Preference number: 3 (lower is better)
Translates to: SSACLVEGKEQNLLLKQSSWKCN*VFSCKP
Trigger: TGGTTTGCATGAGAAGACCAAATTGCACTTCCATGA...TGACTGCTTTAAAAGAAGGTTCTGCTCTTTTCCCTCTACCAGACAAGCAGACGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR TCA 72 bp CTAGACTATTTAAGGTCTATGAAGTCCTGGCTATCCTaGAACACACCATATAGATCAGGCTGGCCTCTAACT +
Preference number: 3 (lower is better)
Translates to: LDYLRSMKSWLS*NTPYRSGWPLT
Trigger: AGTTAGAGGCCAGCCTGATCTATATGGTGTGTTTCAGGATAGCCAGGACTTCATAGACCTTAAATAGTCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR GCA 72 bp TTAAATGATGTAAGGTTTACTGTGTCTGGCAGGATGTaGTTCAGAGACTTGTTCTTAGTACAGCTCTTGGGG +
Preference number: 3 (lower is better)
Translates to: LNDVRFTVSGRM*FRDLFLVQLLG
Trigger: CCCCAAGAGCTGTACTAAGAACAAGTCTCTGAAGCACATCCTGCCAGACACAGTAAACCTTACATCATTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR TCA 72 bp CACAATGCACACTCTACTGAACAATCACTCCCCAGCTaGAACCACAGAGAAACTTCACTTAAAATCAGTAAC +
Preference number: 3 (lower is better)
Translates to: HNAHSTEQSLPS*NHRETSLKISN
Trigger: GTTACTGATTTTAAGTGAAGTTTCTCTGTGGTTTCAGCTGGGGAGTGATTGTTCAGTAGAGTGTGCATTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR CCA 72 bp GAGCTAAGTAACACTACAAACAATTTGGTCTTCTCATaGAAGTGCAATTTGGTCTTCTCATGCAAACCAGGC +
Preference number: 3 (lower is better)
Translates to: ELSNTTNNLVFS*KCNLVFSCKPG
Trigger: GCCTGGTTTGCATGAGAAGACCAAATTGCACTTCCATGAGAAGACCAAATTGTTTGTAGTGTTACTTAGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR-3UTR CAA 90 bp TCTACTTGGAGGAGTTCATTTCTAAAACAAGTCCTGTTTTGGAGTGCCCAAACACATGGTGTAGTGAGTTaGGCACTTCATTGTAATGAT +
Preference number: 3 (lower is better)
Translates to: STWRSSFLKQVLFWSAQTHGVVS*ALHCND
Trigger: ATCATTACAATGAAGTGCCAAACTCACTACACCATG...TGTTTGGGCACTCCAAAACAGGACTTGTTTTAGAAATGAACTCCTCCAAGTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR TCA 72 bp ACATTATTGATGGGGCATGTGAACTTGTTAATGGCTTaGCACTGTTCTCTGGCAGGAGTTTATGAGGAATAT +
Preference number: 3 (lower is better)
Translates to: TLLMGHVNLLMA*HCSLAGVYEEY
Trigger: ATATTCCTCATAAACTCCTGCCAGAGAACAGTGTCAAGCCATTAACAAGTTCACATGCCCCATCAATAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR TCA 72 bp ATGTATTTACACAGTGATGGTAAGTCTCCATCAATGTaGCTGCATTTCCAAGCTCTTCAGATAGGCTTGAAT +
Preference number: 3 (lower is better)
Translates to: MYLHSDGKSPSM*LHFQALQIGLN
Trigger: ATTCAAGCCTATCTGAAGAGCTTGGAAATGCAGTCACATTGATGGAGACTTACCATCACTGTGTAAATACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS-3UTR GCA 90 bp GGCGAAGGGCGGGACTCTATCCTGACGGGCTGTCTGTCTGTCCCCGGCCACAGGGGTTGCCCCACGCGTTaGGGCGCGACGAGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: GEGRDSILTGCLSVPGHRGCPTR*GATSWS
Trigger: AGACCAGCTCGTCGCGCCGCAACGCGTGGGGCAACC...CCTGTGGCCGGGGACAGACAGACAGCCCGTCAGGATAGAGTCCCGCCCTTCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS-3UTR CCA 90 bp GGCGAAGGGCGGGACTCTATCCTGACGGGCTGTCTGTCTGTCCCCGGCCACAGGCCGACGGCGCCGGACTaGAGGTGGTCGAGTTGGACT +
Preference number: 4 (lower is better)
Translates to: GEGRDSILTGCLSVPGHRPTAPD*RWSSWT
Trigger: AGTCCAACTCGACCACCTCCAGTCCGGCGCCGTCGG...CCTGTGGCCGGGGACAGACAGACAGCCCGTCAGGATAGAGTCCCGCCCTTCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS-3UTR CCA 90 bp GGCGAAGGGCGGGACTCTATCCTGACGGGCTGTCTGTCTGTCCCCGGCCACAGGGTGGTCGAGTTGGACTaGTTAAACTCCGGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: GEGRDSILTGCLSVPGHRVVELD*LNSGLG
Trigger: GCCCAGGCCGGAGTTTAACCAGTCCAACTCGACCAC...CCTGTGGCCGGGGACAGACAGACAGCCCGTCAGGATAGAGTCCCGCCCTTCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS-3UTR TCA 90 bp GGCGAAGGGCGGGACTCTATCCTGACGGGCTGTCTGTCTGTCCCCGGCCACAGGGGCCACTTAGAAAACTaGGACCCAGGGCTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: GEGRDSILTGCLSVPGHRGHLEN*DPGLSP
Trigger: TGGAGACAGCCCTGGGTCTCAGTTTTCTAAGTGGCC...CCTGTGGCCGGGGACAGACAGACAGCCCGTCAGGATAGAGTCCCGCCCTTCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS-3UTR GCA 90 bp CCAATGGCACAGTCCTTATCTACAGGAGCACAAAACCTGCGGACGCTGGGCAAACGGCGTACGACAGGTTaGCCCACGCGTTGCGGCGCG +
Preference number: 4 (lower is better)
Translates to: PMAQSLSTGAQNLRTLGKRRTTG*PTRCGA
Trigger: CGCGCCGCAACGCGTGGGGCAACCTGTCGTACGCCG...TTTGCCCAGCGTCCGCAGGTTTTGTGCTCCTGTAGATAAGGACTGTGCCATTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS-3UTR CCA 90 bp CACAAAACCTGCGGACGCTGGGCAAACATCCTGCACAGGAAAGTGCTGCCGCTGACCCGACTGTTGGGTTaGGCCACTCCGGGATCAACC +
Preference number: 4 (lower is better)
Translates to: HKTCGRWANILHRKVLPLTRLLG*ATPGST
Trigger: GGTTGATCCCGGAGTGGCCCAACCCAACAGTCGGGT...CAGCGGCAGCACTTTCCTGTGCAGGATGTTTGCCCAGCGTCCGCAGGTTTTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS-3UTR TCA 90 bp CCAATGGCACAGTCCTTATCTACAGGAGCACAAAACCTGCGGACGCTGGGCAAAGAGCCTCTTCTCGGCTaGGCTCTCGATGGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: PMAQSLSTGAQNLRTLGKEPLLG*ALDGLG
Trigger: ACCAAGGCCATCGAGAGCTCAGCCGAGAAGAGGCTC...TTTGCCCAGCGTCCGCAGGTTTTGTGCTCCTGTAGATAAGGACTGTGCCATTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS-3UTR TCA 90 bp GACAGACAGAGTTCCCATGGGAACTATGACAGCGTGACACAGGGCATCATCTGGAGATCTGCGACAGGGTaGGCCTCTTCTCGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: DRQSSHGNYDSVTQGIIWRSATG*ASSRLS
Trigger: GCTCAGCCGAGAAGAGGCTCACCCTGTCGCAGATCT...CCAGATGATGCCCTGTGTCACGCTGTCATAGTTCCCATGGGAACTCTGTCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS-3UTR GCA 90 bp GTCTGTCTGTCCCCGGCCACAGGGCCAGGCTGTTTGGTTTGCATAAAGCACAATCGAAGCCGTTTGCTGTaGATGTCCAGGGTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: VCLSPATGPGCLVCIKHNRSRLL*MSRVGV
Trigger: CACACCCACCCTGGACATGCACAGCAAACGGCTTCG...ATTGTGCTTTATGCAAACCAAACAGCCTGGCCCTGTGGCCGGGGACAGACAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS-3UTR CCA 90 bp CACAAAACCTGCGGACGCTGGGCAAACATCCTGCACAGGAAAGTGCTGCCGCTGTACTGTTGTTGTCCATaGACGCAGCTCTTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: HKTCGRWANILHRKVLPLYCCCP*TQLFSG
Trigger: CCCGGAGAAGAGCTGCGTCCATGGACAACAACAGTA...CAGCGGCAGCACTTTCCTGTGCAGGATGTTTGCCCAGCGTCCGCAGGTTTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS-3UTR CCA 90 bp GACAGACAGAGTTCCCATGGGAACTATGACAGCGTGACACAGGGCATCATCTGGAAGTCATCGTTGCTGTaGGACCCAGGACTCGCAGGC +
Preference number: 4 (lower is better)
Translates to: DRQSSHGNYDSVTQGIIWKSSLL*DPGLAG
Trigger: GCCTGCGAGTCCTGGGTCCCACAGCAACGATGACTT...CCAGATGATGCCCTGTGTCACGCTGTCATAGTTCCCATGGGAACTCTGTCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS-3UTR CCA 90 bp CAAACACACTGCCACCCCTCTGCGCTGCAGCCAGAGATCCTCTCTGAACAAAATGGGAGCTTCTCCTGGTaGAGGACACCCATCCTACCA +
Preference number: 4 (lower is better)
Translates to: QTHCHPSALQPEILSEQNGSFSW*RTPILP
Trigger: TGGTAGGATGGGTGTCCTCCACCAGGAGAAGCTCCC...ATTTTGTTCAGAGAGGATCTCTGGCTGCAGCGCAGAGGGGTGGCAGTGTGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS-3UTR GCA 90 bp CACAAAACCTGCGGACGCTGGGCAAACATCCTGCACAGGAAAGTGCTGCCGCTGCATTTTGTTATGAGATaGCTGGCTGCCATACGCTGG +
Preference number: 4 (lower is better)
Translates to: HKTCGRWANILHRKVLPLHFVMR*LAAIRW
Trigger: CCAGCGTATGGCAGCCAGGCATCTCATAACAAAATG...CAGCGGCAGCACTTTCCTGTGCAGGATGTTTGCCCAGCGTCCGCAGGTTTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS-3UTR CCA 90 bp CCAATGGCACAGTCCTTATCTACAGGAGCACAAAACCTGCGGACGCTGGGCAAAGTCTGCATAGGCATCTaGGGCAAAGGGCTCATGCTG +
Preference number: 4 (lower is better)
Translates to: PMAQSLSTGAQNLRTLGKVCIGI*GKGLML
Trigger: CAGCATGAGCCCTTTGCCCCAGATGCCTATGCAGAC...TTTGCCCAGCGTCCGCAGGTTTTGTGCTCCTGTAGATAAGGACTGTGCCATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR CAA 72 bp GCTGTCTGTCTGTCCCCGGCCACAGGGCCAGGCTGTTaGGTTTGCATAAAGCACAATGCACACTCTACTGAA +
Preference number: 4 (lower is better)
Translates to: AVCLSPATGPGC*VCIKHNAHSTE
Trigger: TTCAGTAGAGTGTGCATTGTGCTTTATGCAAACCAAACAGCCTGGCCCTGTGGCCGGGGACAGACAGACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS-3UTR TCA 90 bp AGATCAGGCTGGCCTCTAACTCTGAGAGACCCACTTATCTCTGACTACCAAGTGAGCTCTTCTCCGGGGTaGTTTTCCGCTCTTGCCTCC +
Preference number: 4 (lower is better)
Translates to: RSGWPLTLRDPLISDYQVSSSPG*FSALAS
Trigger: GGAGGCAAGAGCGGAAAATCACCCCGGAGAAGAGCT...CACTTGGTAGTCAGAGATAAGTGGGTCTCTCAGAGTTAGAGGCCAGCCTGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS-3UTR GCA 90 bp GTCTGTCTGTCCCCGGCCACAGGGCCAGGCTGTTTGGTTTGCATAAAGCACAATTCTCCCAGGTCATCCTaGTCTGTCATGATGGGAGAA +
Preference number: 4 (lower is better)
Translates to: VCLSPATGPGCLVCIKHNSPRSS*SVMMGE
Trigger: TTCTCCCATCATGACAGAGCAGGATGACCTGGGAGA...ATTGTGCTTTATGCAAACCAAACAGCCTGGCCCTGTGGCCGGGGACAGACAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS-3UTR CCA 90 bp GACAGACAGAGTTCCCATGGGAACTATGACAGCGTGACACAGGGCATCATCTGGCTGCCAGGCGAGGACTaGGTGGACACAGTTAAAGAT +
Preference number: 4 (lower is better)
Translates to: DRQSSHGNYDSVTQGIIWLPGED*VDTVKD
Trigger: ATCTTTAACTGTGTCCACCCAGTCCTCGCCTGGCAG...CCAGATGATGCCCTGTGTCACGCTGTCATAGTTCCCATGGGAACTCTGTCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS-3UTR CCA 90 bp AGATCAGGCTGGCCTCTAACTCTGAGAGACCCACTTATCTCTGACTACCAAGTGCTGGCTGCCATACGCTaGCATGACCGAATTAGGGCC +
Preference number: 4 (lower is better)
Translates to: RSGWPLTLRDPLISDYQVLAAIR*HDRIRA
Trigger: GGCCCTAATTCGGTCATGCCAGCGTATGGCAGCCAG...CACTTGGTAGTCAGAGATAAGTGGGTCTCTCAGAGTTAGAGGCCAGCCTGATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS-3UTR CCA 90 bp CCAATGGCACAGTCCTTATCTACAGGAGCACAAAACCTGCGGACGCTGGGCAAAGGGCTCATGCTGGATTaGCCGTATGTGTACTTTGAG +
Preference number: 4 (lower is better)
Translates to: PMAQSLSTGAQNLRTLGKGLMLD*PYVYFE
Trigger: CTCAAAGTACACATACGGCCAATCCAGCATGAGCCC...TTTGCCCAGCGTCCGCAGGTTTTGTGCTCCTGTAGATAAGGACTGTGCCATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS-3UTR CCA 90 bp CAAACACACTGCCACCCCTCTGCGCTGCAGCCAGAGATCCTCTCTGAACAAAATGCAAAGGGCTCATGCTaGATTGGCCGTATGTGTACT +
Preference number: 4 (lower is better)
Translates to: QTHCHPSALQPEILSEQNAKGSC*IGRMCT
Trigger: AGTACACATACGGCCAATCCAGCATGAGCCCTTTGC...ATTTTGTTCAGAGAGGATCTCTGGCTGCAGCGCAGAGGGGTGGCAGTGTGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS-3UTR TCA 90 bp CAAACACACTGCCACCCCTCTGCGCTGCAGCCAGAGATCCTCTCTGAACAAAATCGAATAAACTTGCTGTaGAGGGACAGATTGTGGCGA +
Preference number: 4 (lower is better)
Translates to: QTHCHPSALQPEILSEQNRINLL*RDRLWR
Trigger: TCGCCACAATCTGTCCCTTCACAGCAAGTTTATTCG...ATTTTGTTCAGAGAGGATCTCTGGCTGCAGCGCAGAGGGGTGGCAGTGTGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS-3UTR TCA 90 bp GGGCTCAAGGGATCCTTGGGCTTACAGCTTTTCTTTTGGTGGCTCCCTGTAATGTTCATGGCAGATGTGTaGGGCATGGTGTTCACCACA +
Preference number: 4 (lower is better)
Translates to: GLKGSLGLQLFFWWLPVMFMADV*GMVFTT
Trigger: TGTGGTGAACACCATGCCTCACACATCTGCCATGAA...CATTACAGGGAGCCACCAAAAGAAAAGCTGTAAGCCCAAGGATCCCTTGAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR CAA 72 bp CTGCAGCCAGAGATCCTCTCTGAACAAAATGTATACTaGGGATCATTTGGCCTGGGAAAGCCACCCTGTCGG +
Preference number: 4 (lower is better)
Translates to: LQPEILSEQNVY*GSFGLGKPPCR
Trigger: CCGACAGGGTGGCTTTCCCAGGCCAAATGATCCCAAGTATACATTTTGTTCAGAGAGGATCTCTGGCTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR CAA 72 bp TCTTTCTTCCCGGAGGCCGAGAATCTACTCCTTCAGTaGGCAGCGTCCAGTACATTATTGATGGGGCATGTG +
Preference number: 4 (lower is better)
Translates to: SFFPEAENLLLQ*AASSTLLMGHV
Trigger: CACATGCCCCATCAATAATGTACTGGACGCTGCCAACTGAAGGAGTAGATTCTCGGCCTCCGGGAAGAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR CAA 72 bp AGATCCTCTCTGAACAAAATGTATACTTGGGATCATTaGGCCTGGGAAAGCCACCCTGTCGGCCACATCTCC +
Preference number: 4 (lower is better)
Translates to: RSSLNKMYTWDH*AWESHPVGHIS
Trigger: GGAGATGTGGCCGACAGGGTGGCTTTCCCAGGCCAAATGATCCCAAGTATACATTTTGTTCAGAGAGGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR CAA 72 bp AGGTTTACTGTGTCTGGCAGGATGTGCTTCAGAGACTaGTTCTTAGTACAGCTCTTGGGGTCAGCCCTCCTA +
Preference number: 4 (lower is better)
Translates to: RFTVSGRMCFRD*FLVQLLGSALL
Trigger: TAGGAGGGCTGACCCCAAGAGCTGTACTAAGAACAAGTCTCTGAAGCACATCCTGCCAGACACAGTAAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR CAA 72 bp AAGGGGAGAACAGAAACCACTGGCCAGAGGCTGCAGTaGTCATTACCCTTACATGATGACTTTAGTGCACGC +
Preference number: 4 (lower is better)
Translates to: KGRTETTGQRLQ*SLPLHDDFSAR
Trigger: GCGTGCACTAAAGTCATCATGTAAGGGTAATGACAACTGCAGCCTCTGGCCAGTGGTTTCTGTTCTCCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR CAA 72 bp TGGGCTCAAGGGATCCTTGGGCTTACAGCTTTTCTTTaGGTGGCTCCCTGTAATGCCTCGTTTCCCAATTAC +
Preference number: 4 (lower is better)
Translates to: WAQGILGLTAFL*VAPCNASFPNY
Trigger: GTAATTGGGAAACGAGGCATTACAGGGAGCCACCAAAAGAAAAGCTGTAAGCCCAAGGATCCCTTGAGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS-3UTR TCA 90 bp CAAACACACTGCCACCCCTCTGCGCTGCAGCCAGAGATCCTCTCTGAACAAAATTTCATCATTTTGTTATaGGATGCCTGGCTGCCATAC +
Preference number: 4 (lower is better)
Translates to: QTHCHPSALQPEILSEQNFIILL*DAWLPY
Trigger: GTATGGCAGCCAGGCATCTCATAACAAAATGATGAA...ATTTTGTTCAGAGAGGATCTCTGGCTGCAGCGCAGAGGGGTGGCAGTGTGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS-3UTR GCA 90 bp TCGTCTGCTTGTCTGGTAGAGGGAAAAGAGCAGAACCTTCTTTTAAAGCAGTCATCTCCAGGACCCTCTTaGCCAGACTGGAGAGATGCT +
Preference number: 4 (lower is better)
Translates to: SSACLVEGKEQNLLLKQSSPGPS*PDWRDA
Trigger: AGCATCTCTCCAGTCTGGGCAAGAGGGTCCTGGAGA...TGACTGCTTTAAAAGAAGGTTCTGCTCTTTTCCCTCTACCAGACAAGCAGACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS-3UTR CCA 90 bp TCGTCTGCTTGTCTGGTAGAGGGAAAAGAGCAGAACCTTCTTTTAAAGCAGTCACTTGGCAGCAGAGGGTaGATACACCAGGGAATGCAC +
Preference number: 4 (lower is better)
Translates to: SSACLVEGKEQNLLLKQSLGSRG*IHQGMH
Trigger: GTGCATTCCCTGGTGTATCCACCCTCTGCTGCCAAG...TGACTGCTTTAAAAGAAGGTTCTGCTCTTTTCCCTCTACCAGACAAGCAGACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS-3UTR CCA 90 bp GGCTGGTTTCCAAGTTTACTGCCTTCATTTTTAACTAATCCTGCCACTGTCTGTATGGTGTTCACCACATaGGGCAGGGTACGGCCGTTG +
Preference number: 4 (lower is better)
Translates to: GWFPSLLPSFLTNPATVCMVFTT*GRVRPL
Trigger: CAACGGCCGTACCCTGCCCCATGTGGTGAACACCAT...ACAGACAGTGGCAGGATTAGTTAAAAATGAAGGCAGTAAACTTGGAAACCAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS-3UTR CCA 90 bp ACTTTCCTGCCCAAAGGGCCAGGAACGTTGAGTGTGCAAGTACTAATTACAATGCAGATGTGTGAGGCATaGTGTTCACCACATGGGGCA +
Preference number: 4 (lower is better)
Translates to: TFLPKGPGTLSVQVLITMQMCEA*CSPHGA
Trigger: TGCCCCATGTGGTGAACACCATGCCTCACACATCTG...CATTGTAATTAGTACTTGCACACTCAACGTTCCTGGCCCTTTGGGCAGGAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS-3UTR CCA 90 bp TCGTCTGCTTGTCTGGTAGAGGGAAAAGAGCAGAACCTTCTTTTAAAGCAGTCACTTGGGAGCTTCTCCTaGTGGAGGACACCCATCCTA +
Preference number: 4 (lower is better)
Translates to: SSACLVEGKEQNLLLKQSLGSFS*WRTPIL
Trigger: TAGGATGGGTGTCCTCCACCAGGAGAAGCTCCCAAG...TGACTGCTTTAAAAGAAGGTTCTGCTCTTTTCCCTCTACCAGACAAGCAGACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS-3UTR TCA 90 bp TCGTCTGCTTGTCTGGTAGAGGGAAAAGAGCAGAACCTTCTTTTAAAGCAGTCACATCCTGCTCTGTCATaGTGGGAGAAAGTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: SSACLVEGKEQNLLLKQSHPALS*WEKVSH
Trigger: GTGGGAGACTTTCTCCCATCATGACAGAGCAGGATG...TGACTGCTTTAAAAGAAGGTTCTGCTCTTTTCCCTCTACCAGACAAGCAGACGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS-3UTR CCA 90 bp CAAACACACTGCCACCCCTCTGCGCTGCAGCCAGAGATCCTCTCTGAACAAAATGTTCTCCATGTTTTCTaGATTGCTGATTTCAGACAG +
Preference number: 4 (lower is better)
Translates to: QTHCHPSALQPEILSEQNVLHVF*IADFRQ
Trigger: CTGTCTGAAATCAGCAATCCAGAAAACATGGAGAAC...ATTTTGTTCAGAGAGGATCTCTGGCTGCAGCGCAGAGGGGTGGCAGTGTGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR CAA 72 bp AGGATGTGCTTCAGAGACTTGTTCTTAGTACAGCTCTaGGGGTCAGCCCTCCTATGGAACTCAACCATACAA +
Preference number: 4 (lower is better)
Translates to: RMCFRDLFLVQL*GSALLWNSTIQ
Trigger: TTGTATGGTTGAGTTCCATAGGAGGGCTGACCCCAAGAGCTGTACTAAGAACAAGTCTCTGAAGCACATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS-3UTR GCA 90 bp AGTCTTTTCACAGAGCAATCATGTACAATAATAGACCAGAAAGCGAACATTCTCGGATACACCAGGGAATaGACGTCCCCATCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: SLFTEQSCTIIDQKANILGYTRE*TSPSPR
Trigger: CCTGGGAGATGGGGACGTGCATTCCCTGGTGTATCC...GAGAATGTTCGCTTTCTGGTCTATTATTGTACATGATTGCTCTGTGAAAAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS-3UTR CCA 90 bp ACTTTCCTGCCCAAAGGGCCAGGAACGTTGAGTGTGCAAGTACTAATTACAATGCTCTTTCAAGAGTCCTaGGGCACAGTTATACTGGTT +
Preference number: 4 (lower is better)
Translates to: TFLPKGPGTLSVQVLITMLFQES*GTVILV
Trigger: AACCAGTATAACTGTGCCCCAGGACTCTTGAAAGAG...CATTGTAATTAGTACTTGCACACTCAACGTTCCTGGCCCTTTGGGCAGGAAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR CAA 72 bp GAACCATTGCTCTCTAGACGGTTTGCTAAGTTTAGATaGCACTTCTTCACATCAGGGGCCATGGTTTGGTCA +
Preference number: 4 (lower is better)
Translates to: EPLLSRRFAKFR*HFFTSGAMVWS
Trigger: TGACCAAACCATGGCCCCTGATGTGAAGAAGTGCAATCTAAACTTAGCAAACCGTCTAGAGAGCAATGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR CAA 72 bp TCCTCACACACTGAGAACCATTGCTCTCTAGACGGTTaGCTAAGTTTAGATTGCACTTCTTCACATCAGGGG +
Preference number: 4 (lower is better)
Translates to: SSHTENHCSLDG*LSLDCTSSHQG
Trigger: CCCCTGATGTGAAGAAGTGCAATCTAAACTTAGCAAACCGTCTAGAGAGCAATGGTTCTCAGTGTGTGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR CAA 72 bp TCTCAAATACCAGGAGTTAAGAAGCCTTTTGCAAAGTaGCTCTTTCTTCCCGGAGGCCGAGAATCTACTCCT +
Preference number: 4 (lower is better)
Translates to: SQIPGVKKPFAK*LFLPGGRESTP
Trigger: AGGAGTAGATTCTCGGCCTCCGGGAAGAAAGAGCAACTTTGCAAAAGGCTTCTTAACTCCTGGTATTTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR CAA 72 bp TACATGTCTCTCAAATACCAGGAGTTAAGAAGCCTTTaGCAAAGTTGCTCTTTCTTCCCGGAGGCCGAGAAT +
Preference number: 4 (lower is better)
Translates to: YMSLKYQELRSL*QSCSFFPEAEN
Trigger: ATTCTCGGCCTCCGGGAAGAAAGAGCAACTTTGCAAAAGGCTTCTTAACTCCTGGTATTTGAGAGACATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS-3UTR TCA 90 bp TCTACTTGGAGGAGTTCATTTCTAAAACAAGTCCTGTTTTGGAGTGCCCAAACAGGGACGAGAGAAGGTTaGGATTATCCAGAAGGTTCT +
Preference number: 4 (lower is better)
Translates to: STWRSSFLKQVLFWSAQTGTREG*DYPEGS
Trigger: AGAACCTTCTGGATAATCTCAACCTTCTCTCGTCCC...TGTTTGGGCACTCCAAAACAGGACTTGTTTTAGAAATGAACTCCTCCAAGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS-3UTR CCA 90 bp TCTACTTGGAGGAGTTCATTTCTAAAACAAGTCCTGTTTTGGAGTGCCCAAACACTGTGTGGGAAGCTTTaGTTGGGCAACACATTATCA +
Preference number: 4 (lower is better)
Translates to: STWRSSFLKQVLFWSAQTLCGKL*LGNTLS
Trigger: TGATAATGTGTTGCCCAACCAAAGCTTCCCACACAG...TGTTTGGGCACTCCAAAACAGGACTTGTTTTAGAAATGAACTCCTCCAAGTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR CAA 72 bp CTATACATAACTTTCCTGCCCAAAGGGCCAGGAACGTaGAGTGTGCAAGTACTAATTACAATGGTTTACGAT +
Preference number: 4 (lower is better)
Translates to: LYITFLPKGPGT*SVQVLITMVYD
Trigger: ATCGTAAACCATTGTAATTAGTACTTGCACACTCAACGTTCCTGGCCCTTTGGGCAGGAAAGTTATGTATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS-3UTR CCA 90 bp AGTCTTTTCACAGAGCAATCATGTACAATAATAGACCAGAAAGCGAACATTCTCTGCAAACGAATAGCATaGTGTCTGCTGCATCATGCT +
Preference number: 4 (lower is better)
Translates to: SLFTEQSCTIIDQKANILCKRIA*CLLHHA
Trigger: AGCATGATGCAGCAGACACCATGCTATTCGTTTGCA...GAGAATGTTCGCTTTCTGGTCTATTATTGTACATGATTGCTCTGTGAAAAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR CAA 72 bp ACAAAGCTGGCACTTAATCTTATTCTGCCCCAAAGTTaGACAAGTCCATTAATTCAGCACATTGATCACTGG +
Preference number: 4 (lower is better)
Translates to: TKLALNLILPQS*TSPLIQHIDHW
Trigger: CCAGTGATCAATGTGCTGAATTAATGGACTTGTCAAACTTTGGGGCAGAATAAGATTAAGTGCCAGCTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR CAA 72 bp GTGCACGAGCCTCAGGGTTTAGCTTGTCTTTTGATTTaGGGTTATATATATTGGCCTTTGGGTACTACATTT +
Preference number: 4 (lower is better)
Translates to: VHEPQGLACLLI*GYIYWPLGTTF
Trigger: AAATGTAGTACCCAAAGGCCAATATATATAACCCAAAATCAAAAGACAAGCTAAACCCTGAGGCTCGTGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
3UTR CAA 72 bp GTTTCACAACTATGTGCACGAGCCTCAGGGTTTAGCTaGTCTTTTGATTTTGGGTTATATATATTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: VSQLCARASGFS*SFDFGLYILAF
Trigger: AAAGGCCAATATATATAACCCAAAATCAAAAGACAAGCTAAACCCTGAGGCTCGTGCACATAGTTGTGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS CCA 90 bp GCCGCGCCGCCCGACGGCGCCGGACTGGAGGTGGTCGAGTTGGACTaGTTAAACTCCGGCCTGGGCAGCGGCCAGGTACAGGAGCGCTGC +
Preference number: 5 (lower is better)
Translates to: AAPPDGAGLEVVELD*LNSGLGSGQVQERC
Trigger: GCAGCGCTCCTGTACCTGGCCGCTGCCCAGGCCGGAGTTTAACCAGTCCAACTCGACCACCTCCAGTCCGGCGCCGTCGGGCGGCGCGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS-3UTR CAA 90 bp GGCGAAGGGCGGGACTCTATCCTGACGGGCTGTCTGTCTGTCCCCGGCCACAGGGACCCGACTGTTGGGTaGGGCCACTCCGGGATCAAC +
Preference number: 5 (lower is better)
Translates to: GEGRDSILTGCLSVPGHRDPTVG*GHSGIN
Trigger: GTTGATCCCGGAGTGGCCCAACCCAACAGTCGGGTC...CCTGTGGCCGGGGACAGACAGACAGCCCGTCAGGATAGAGTCCCGCCCTTCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS-3UTR CAA 90 bp GGCGAAGGGCGGGACTCTATCCTGACGGGCTGTCTGTCTGTCCCCGGCCACAGGGGTGATTTTCCGCTCTaGCCTCCCTCTGGATTGAGC +
Preference number: 5 (lower is better)
Translates to: GEGRDSILTGCLSVPGHRGDFPL*PPSGLS
Trigger: GCTCAATCCAGAGGGAGGCAAGAGCGGAAAATCACC...CCTGTGGCCGGGGACAGACAGACAGCCCGTCAGGATAGAGTCCCGCCCTTCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS-3UTR CAA 90 bp GTCTGTCTGTCCCCGGCCACAGGGCCAGGCTGTTTGGTTTGCATAAAGCACAATAGGTTGCCCCACGCGTaGCGGCGCGACGAGCTGGTC +
Preference number: 5 (lower is better)
Translates to: VCLSPATGPGCLVCIKHNRLPHA*RRDELV
Trigger: GACCAGCTCGTCGCGCCGCAACGCGTGGGGCAACCT...ATTGTGCTTTATGCAAACCAAACAGCCTGGCCCTGTGGCCGGGGACAGACAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS TCA 90 bp ATGTGTGAGGCATGGTGTTCACCACATGGGGCAGGGTACGGCCGTTaGCCGAAGCCGTTTGCTGTGCATGTCCAGGGTGGGTGTGGGAGC +
Preference number: 5 (lower is better)
Translates to: MCEAWCSPHGAGYGR*PKPFAVHVQGGCGS
Trigger: GCTCCCACACCCACCCTGGACATGCACAGCAAACGGCTTCGGTCAACGGCCGTACCCTGCCCCATGTGGTGAACACCATGCCTCACACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS GCA 90 bp AGCGTAGACGCCATCTTGGCAGCAGAGGGTGGATACACCAGGGAATaGACGTCCCCATCTCCCAGGTCATCCTGCTCTGTCATGATGGGA +
Preference number: 5 (lower is better)
Translates to: SVDAILAAEGGYTRE*TSPSPRSSCSVMMG
Trigger: TCCCATCATGACAGAGCAGGATGACCTGGGAGATGGGGACGTGCATTCCCTGGTGTATCCACCCTCTGCTGCCAAGATGGCGTCTACGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS-3UTR CAA 90 bp GACAGACAGAGTTCCCATGGGAACTATGACAGCGTGACACAGGGCATCATCTGGCTGGAGGTGGTCGAGTaGGACTGGTTAAACTCCGGC +
Preference number: 5 (lower is better)
Translates to: DRQSSHGNYDSVTQGIIWLEVVE*DWLNSG
Trigger: GCCGGAGTTTAACCAGTCCAACTCGACCACCTCCAG...CCAGATGATGCCCTGTGTCACGCTGTCATAGTTCCCATGGGAACTCTGTCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS-3UTR CAA 90 bp GGGCTCAAGGGATCCTTGGGCTTACAGCTTTTCTTTTGGTGGCTCCCTGTAATGGTCTCCAGGACCCTCTaGCCCAGACTGGAGAGATGC +
Preference number: 5 (lower is better)
Translates to: GLKGSLGLQLFFWWLPVMVSRTL*PRLERC
Trigger: GCATCTCTCCAGTCTGGGCAAGAGGGTCCTGGAGAC...CATTACAGGGAGCCACCAAAAGAAAAGCTGTAAGCCCAAGGATCCCTTGAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS-3UTR CAA 90 bp CACAAAACCTGCGGACGCTGGGCAAACATCCTGCACAGGAAAGTGCTGCCGCTGGGGGACGAGAGAAGGTaGAGATTATCCAGAAGGTTC +
Preference number: 5 (lower is better)
Translates to: HKTCGRWANILHRKVLPLGDERR*RLSRRF
Trigger: GAACCTTCTGGATAATCTCAACCTTCTCTCGTCCCC...CAGCGGCAGCACTTTCCTGTGCAGGATGTTTGCCCAGCGTCCGCAGGTTTTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS-3UTR CAA 90 bp GGGCTCAAGGGATCCTTGGGCTTACAGCTTTTCTTTTGGTGGCTCCCTGTAATGGTTGACCGAAGCCGTTaGCTGTGCATGTCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: GLKGSLGLQLFFWWLPVMVDRSR*LCMSRV
Trigger: CACCCTGGACATGCACAGCAAACGGCTTCGGTCAAC...CATTACAGGGAGCCACCAAAAGAAAAGCTGTAAGCCCAAGGATCCCTTGAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS-3UTR CAA 90 bp GGGCTCAAGGGATCCTTGGGCTTACAGCTTTTCTTTTGGTGGCTCCCTGTAATGGGCCGTATGTGTACTTaGAGTAGTTTGGACTGGGTG +
Preference number: 5 (lower is better)
Translates to: GLKGSLGLQLFFWWLPVMGRMCT*SSLDWV
Trigger: CACCCAGTCCAAACTACTCAAAGTACACATACGGCC...CATTACAGGGAGCCACCAAAAGAAAAGCTGTAAGCCCAAGGATCCCTTGAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS-3UTR CAA 90 bp CAAACACACTGCCACCCCTCTGCGCTGCAGCCAGAGATCCTCTCTGAACAAAATACTGTGTGGGAAGCTTaGGTTGGGCAACACATTATC +
Preference number: 5 (lower is better)
Translates to: QTHCHPSALQPEILSEQNTVWEA*VGQHII
Trigger: GATAATGTGTTGCCCAACCAAAGCTTCCCACACAGT...ATTTTGTTCAGAGAGGATCTCTGGCTGCAGCGCAGAGGGGTGGCAGTGTGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS-3UTR CAA 90 bp GGGCTCAAGGGATCCTTGGGCTTACAGCTTTTCTTTTGGTGGCTCCCTGTAATGGCAAATTTACTGTTGTaGTCCATGGACGCAGCTCTT +
Preference number: 5 (lower is better)
Translates to: GLKGSLGLQLFFWWLPVMANLLL*SMDAAL
Trigger: AAGAGCTGCGTCCATGGACAACAACAGTAAATTTGC...CATTACAGGGAGCCACCAAAAGAAAAGCTGTAAGCCCAAGGATCCCTTGAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS CCA 90 bp GGACGAGAGAAGGTTGAGATTATCCAGAAGGTTCTCCATGTTTTCTaGATTGCTGATTTCAGACAGACTGGGCAGCGTAGACGCCATCTT +
Preference number: 5 (lower is better)
Translates to: GREKVEIIQKVLHVF*IADFRQTGQRRRHL
Trigger: AAGATGGCGTCTACGCTGCCCAGTCTGTCTGAAATCAGCAATCCAGAAAACATGGAGAACCTTCTGGATAATCTCAACCTTCTCTCGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS-3UTR CAA 90 bp TCGTCTGCTTGTCTGGTAGAGGGAAAAGAGCAGAACCTTCTTTTAAAGCAGTCACTGTGTGTTGTAGTCTaGACACTGTGTGGGAAGCTT +
Preference number: 5 (lower is better)
Translates to: SSACLVEGKEQNLLLKQSLCVVV*TLCGKL
Trigger: AAGCTTCCCACACAGTGTCAAGACTACAACACACAG...TGACTGCTTTAAAAGAAGGTTCTGCTCTTTTCCCTCTACCAGACAAGCAGACGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS-3UTR CAA 90 bp ACTTTCCTGCCCAAAGGGCCAGGAACGTTGAGTGTGCAAGTACTAATTACAATGTCCATGTTTTCTGGATaGCTGATTTCAGACAGACTG +
Preference number: 5 (lower is better)
Translates to: TFLPKGPGTLSVQVLITMSMFSG*LISDRL
Trigger: CAGTCTGTCTGAAATCAGCAATCCAGAAAACATGGA...CATTGTAATTAGTACTTGCACACTCAACGTTCCTGGCCCTTTGGGCAGGAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS-3UTR CAA 90 bp TCTACTTGGAGGAGTTCATTTCTAAAACAAGTCCTGTTTTGGAGTGCCCAAACATTAGCAAATTTACTGTaGTTGTCCATGGACGCAGCT +
Preference number: 5 (lower is better)
Translates to: STWRSSFLKQVLFWSAQTLANLL*LSMDAA
Trigger: AGCTGCGTCCATGGACAACAACAGTAAATTTGCTAA...TGTTTGGGCACTCCAAAACAGGACTTGTTTTAGAAATGAACTCCTCCAAGTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS GCA 72 bp GGTTGCCCCACGCGTTGCGGCGCGACGAGCTGGTCTTaGGCGGCTGTCCCGCGAGTGGCCCCGCGGCGGCGG +
Preference number: 6 (lower is better)
Translates to: GCPTRCGATSWS*AAVPRVAPRRR
Trigger: CCGCCGCCGCGGGGCCACTCGCGGGACAGCCGCGCAAGACCAGCTCGTCGCGCCGCAACGCGTGGGGCAACC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS CAA 72 bp AGGTTGCCCCACGCGTTGCGGCGCGACGAGCTGGTCTaGCGCGGCTGTCCCGCGAGTGGCCCCGCGGCGGCG +
Preference number: 6 (lower is better)
Translates to: RLPHALRRDELV*RGCPASGPAAA
Trigger: CGCCGCCGCGGGGCCACTCGCGGGACAGCCGCGCAAGACCAGCTCGTCGCGCCGCAACGCGTGGGGCAACCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS CCA 72 bp ACGACAGGTTGCCCCACGCGTTGCGGCGCGACGAGCTaGTCTTGCGCGGCTGTCCCGCGAGTGGCCCCGCGG +
Preference number: 6 (lower is better)
Translates to: TTGCPTRCGATS*SCAAVPRVAPR
Trigger: CCGCGGGGCCACTCGCGGGACAGCCGCGCAAGACCAGCTCGTCGCGCCGCAACGCGTGGGGCAACCTGTCGT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS GCA 72 bp AACTCCGGCCTGGGCAGCGGCCAGGTACAGGAGCGCTaGCGGGGCAGCGGCTCGAAGTCCGGGTCGGTCTCC +
Preference number: 6 (lower is better)
Translates to: NSGLGSGQVQER*RGSGSKSGSVS
Trigger: GGAGACCGACCCGGACTTCGAGCCGCTGCCCCGGCAGCGCTCCTGTACCTGGCCGCTGCCCAGGCCGGAGTT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS CAA 72 bp GCGCCGCCCGACGGCGCCGGACTGGAGGTGGTCGAGTaGGACTGGTTAAACTCCGGCCTGGGCAGCGGCCAG +
Preference number: 6 (lower is better)
Translates to: APPDGAGLEVVE*DWLNSGLGSGQ
Trigger: CTGGCCGCTGCCCAGGCCGGAGTTTAACCAGTCCAACTCGACCACCTCCAGTCCGGCGCCGTCGGGCGGCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS CAA 90 bp TTGGCGGCCGCGCCGCCCGACGGCGCCGGACTGGAGGTGGTCGAGTaGGACTGGTTAAACTCCGGCCTGGGCAGCGGCCAGGTACAGGAG +
Preference number: 6 (lower is better)
Translates to: LAAAPPDGAGLEVVE*DWLNSGLGSGQVQE
Trigger: CTCCTGTACCTGGCCGCTGCCCAGGCCGGAGTTTAACCAGTCCAACTCGACCACCTCCAGTCCGGCGCCGTCGGGCGGCGCGGCCGCCAA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS CCA 72 bp CCCGACGGCGCCGGACTGGAGGTGGTCGAGTTGGACTaGTTAAACTCCGGCCTGGGCAGCGGCCAGGTACAG +
Preference number: 6 (lower is better)
Translates to: PDGAGLEVVELD*LNSGLGSGQVQ
Trigger: CTGTACCTGGCCGCTGCCCAGGCCGGAGTTTAACCAGTCCAACTCGACCACCTCCAGTCCGGCGCCGTCGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS CAA 72 bp GGCATGGTGTTCACCACATGGGGCAGGGTACGGCCGTaGACCGAAGCCGTTTGCTGTGCATGTCCAGGGTGG +
Preference number: 6 (lower is better)
Translates to: GMVFTTWGRVRP*TEAVCCACPGW
Trigger: CCACCCTGGACATGCACAGCAAACGGCTTCGGTCAACGGCCGTACCCTGCCCCATGTGGTGAACACCATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS TCA 72 bp GTCTTCACGGGGGTCAAGCGGTTCATGGCAGATGTGTaGGGCATGGTGTTCACCACATGGGGCAGGGTACGG +
Preference number: 6 (lower is better)
Translates to: VFTGVKRFMADV*GMVFTTWGRVR
Trigger: CCGTACCCTGCCCCATGTGGTGAACACCATGCCTCACACATCTGCCATGAACCGCTTGACCCCCGTGAAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS CAA 72 bp GGGCCCATCATTACATTTTGGCCCAGGACCCGACTGTaGGGTTGGGCCACTCCGGGATCAACCGGTGACATA +
Preference number: 6 (lower is better)
Translates to: GPIITFWPRTRL*GWATPGSTGDI
Trigger: TATGTCACCGGTTGATCCCGGAGTGGCCCAACCCAACAGTCGGGTCCTGGGCCAAAATGTAATGATGGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS CAA 72 bp GCAGCCCGCCCTCGGCTCTTAGCAAATTTACTGTTGTaGTCCATGGACGCAGCTCTTCTCCGGGGTGATTTT +
Preference number: 6 (lower is better)
Translates to: AARPRLLANLLL*SMDAALLRGDF
Trigger: AAAATCACCCCGGAGAAGAGCTGCGTCCATGGACAACAACAGTAAATTTGCTAAGAGCCGAGGGCGGGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS CAA 72 bp TTAGCAGCCCGCCCTCGGCTCTTAGCAAATTTACTGTaGTTGTCCATGGACGCAGCTCTTCTCCGGGGTGAT +
Preference number: 6 (lower is better)
Translates to: LAARPRLLANLL*LSMDAALLRGD
Trigger: ATCACCCCGGAGAAGAGCTGCGTCCATGGACAACAACAGTAAATTTGCTAAGAGCCGAGGGCGGGCTGCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS CCA 72 bp ATCATTACATTTTGGCCCAGGACCCGACTGTTGGGTTaGGCCACTCCGGGATCAACCGGTGACATAATGTCA +
Preference number: 6 (lower is better)
Translates to: IITFWPRTRLLG*ATPGSTGDIMS
Trigger: TGACATTATGTCACCGGTTGATCCCGGAGTGGCCCAACCCAACAGTCGGGTCCTGGGCCAAAATGTAATGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS CAA 72 bp CGAGGACGAAATGTACTCCAGTTATCAAAGTCATCGTaGCTGTGGGACCCAGGACTCGCAGGCCACTTAGAA +
Preference number: 6 (lower is better)
Translates to: RGRNVLQLSKSS*LWDPGLAGHLE
Trigger: TTCTAAGTGGCCTGCGAGTCCTGGGTCCCACAGCAACGATGACTTTGATAACTGGAGTACATTTCGTCCTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS CAA 90 bp GAGAGAAGGTTGAGATTATCCAGAAGGTTCTCCATGTTTTCTGGATaGCTGATTTCAGACAGACTGGGCAGCGTAGACGCCATCTTGGCA +
Preference number: 6 (lower is better)
Translates to: ERRLRLSRRFSMFSG*LISDRLGSVDAILA
Trigger: TGCCAAGATGGCGTCTACGCTGCCCAGTCTGTCTGAAATCAGCAATCCAGAAAACATGGAGAACCTTCTGGATAATCTCAACCTTCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS CCA 72 bp AAGGTTGAGATTATCCAGAAGGTTCTCCATGTTTTCTaGATTGCTGATTTCAGACAGACTGGGCAGCGTAGA +
Preference number: 6 (lower is better)
Translates to: KVEIIQKVLHVF*IADFRQTGQRR
Trigger: TCTACGCTGCCCAGTCTGTCTGAAATCAGCAATCCAGAAAACATGGAGAACCTTCTGGATAATCTCAACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7
CDS CCA 72 bp TGTACTTTGAGTAGTTTGGACTGGGTGAATTTAGACTaGTGTTTGGCGGTGCAAACGAATAGCATGGTGTCT +
Preference number: 6 (lower is better)
Translates to: CTLSSLDWVNLD*CLAVQTNSMVS
Trigger: AGACACCATGCTATTCGTTTGCACCGCCAAACACCAGTCTAAATTCACCCAGTCCAAACTACTCAAAGTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053764.7