Pregenerated sensors for FOXO1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044167Ensembl transcript IDs: ENSMUST00000053764.7
Found 198 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | CTGTTACTCAAGTCCGCTGTGGTGGCGAAGGGCGGGACTCTATCCTaGCGGGCTGTCTGTCTGTCCCCGGCCACAGGGCCAGGCTGTTTG | + |
Preference number: 1 (lower is better) Translates to: LLLKSAVVAKGGTLS*RAVCLSPATGPGCL Trigger: CAAACAGCCTGGCCCTGTGGCCGGGGACAGACAGACAGCCCGTCAGGATAGAGTCCCGCCCTTCGCCACCACAGCGGACTTGAGTAACAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR CCA 90 bp | GCTGTGTCCCTGAGACCCGTTAGAGTAGCAGGAAGAGGACTGCCCTaGACAGAGCCATCTCAGGAGCAAGGGGAAGAGAGGAATGCCAGC | + |
Preference number: 1 (lower is better) Translates to: AVSLRPVRVAGRGLP*TEPSQEQGEERNAS Trigger: GCTGGCATTCCTCTCTTCCCCTTGCTCCTGAGATGGCTCTGTCCAGGGCAGTCCTCTTCCTGCTACTCTAACGGGTCTCAGGGACACAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR GCA 90 bp | ACTGCCCTGGACAGAGCCATCTCAGGAGCAAGGGGAAGAGAGGAATaGCAGCACCATCAGCCATTCTTACCCACCAGACTCGCCTTGCCA | + |
Preference number: 1 (lower is better) Translates to: TALDRAISGARGREE*QHHQPFLPTRLALP Trigger: TGGCAAGGCGAGTCTGGTGGGTAAGAATGGCTGATGGTGCTGGCATTCCTCTCTTCCCCTTGCTCCTGAGATGGCTCTGTCCAGGGCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR GCA 90 bp | CGGGCTGTCTGTCTGTCCCCGGCCACAGGGCCAGGCTGTTTGGTTTaGATAAAGCACAATGCACACTCTACTGAACAATCACTCCCCAGC | + |
Preference number: 1 (lower is better) Translates to: RAVCLSPATGPGCLV*IKHNAHSTEQSLPS Trigger: GCTGGGGAGTGATTGTTCAGTAGAGTGTGCATTGTGCTTTATGCAAACCAAACAGCCTGGCCCTGTGGCCGGGGACAGACAGACAGCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR TCA 90 bp | AAGTTCCCCTTTCCTGAGCGACAGACAGAGTTCCCATGGGAACTATaGCAGCGTGACACAGGGCATCATCTGGCAGGCTTCCCTAGAAGG | + |
Preference number: 1 (lower is better) Translates to: KFPFPERQTEFPWEL*QRDTGHHLAGFPRR Trigger: CCTTCTAGGGAAGCCTGCCAGATGATGCCCTGTGTCACGCTGTCATAGTTCCCATGGGAACTCTGTCTGTCGCTCAGGAAAGGGGAACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR CCA 90 bp | CAATGGCACAGTCCTTATCTACAGGAGCACAAAACCTGCGGACGCTaGGCAAACATCCTGCACAGGAAAGTGCTGCCGCTGTTGCCAAGT | + |
Preference number: 1 (lower is better) Translates to: QWHSPYLQEHKTCGR*ANILHRKVLPLLPS Trigger: ACTTGGCAACAGCGGCAGCACTTTCCTGTGCAGGATGTTTGCCCAGCGTCCGCAGGTTTTGTGCTCCTGTAGATAAGGACTGTGCCATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR TCA 90 bp | AGACTGCGGTGGGTAGCGGGGGAGGCAGAGGAACACACCCCAAGCTaGCTGACCTTTCGCTATCTAAACAATAAATCCCTAGAATTCCCC | + |
Preference number: 1 (lower is better) Translates to: RLRWVAGEAEEHTPS*LTFRYLNNKSLEFP Trigger: GGGGAATTCTAGGGATTTATTGTTTAGATAGCGAAAGGTCAGTCAGCTTGGGGTGTGTTCCTCTGCCTCCCCCGCTACCCACCGCAGTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR GCA 90 bp | AATGATTCCCAATGGCACAGTCCTTATCTACAGGAGCACAAAACCTaGGGACGCTGGGCAAACATCCTGCACAGGAAAGTGCTGCCGCTG | + |
Preference number: 1 (lower is better) Translates to: NDSQWHSPYLQEHKT*GRWANILHRKVLPL Trigger: CAGCGGCAGCACTTTCCTGTGCAGGATGTTTGCCCAGCGTCCGCAGGTTTTGTGCTCCTGTAGATAAGGACTGTGCCATTGGGAATCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR TCA 90 bp | TTACACTGTTCAGAGCCAAAGAGAACAGAGGTGGGGACCGAGAAGTaGCAGGATTCTTCAGGACAGAGCCACAAAGCCACCTCCATCGTG | + |
Preference number: 1 (lower is better) Translates to: LHCSEPKRTEVGTEK*QDSSGQSHKATSIV Trigger: CACGATGGAGGTGGCTTTGTGGCTCTGTCCTGAAGAATCCTGTCACTTCTCGGTCCCCACCTCTGTTCTCTTTGGCTCTGAACAGTGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR CCA 90 bp | CTTCTCATGCAAACCAGGCCTTCTCATAAAGGCAAAGAGGGGTGCTaGGGTACATCTATTCCTCAAACTGTGGGAGACTGGGAAACACCG | + |
Preference number: 1 (lower is better) Translates to: LLMQTRPSHKGKEGC*GTSIPQTVGDWETP Trigger: CGGTGTTTCCCAGTCTCCCACAGTTTGAGGAATAGATGTACCCCAGCACCCCTCTTTGCCTTTATGAGAAGGCCTGGTTTGCATGAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR CCA 90 bp | CAATACTGTGGGCTCAAGGGATCCTTGGGCTTACAGCTTTTCTTTTaGTGGCTCCCTGTAATGCCTCGTTTCCCAATTACCTCCTCCCTC | + |
Preference number: 1 (lower is better) Translates to: QYCGLKGSLGLQLFF*WLPVMPRFPITSSL Trigger: GAGGGAGGAGGTAATTGGGAAACGAGGCATTACAGGGAGCCACCAAAAGAAAAGCTGTAAGCCCAAGGATCCCTTGAGCCCACAGTATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR TCA 90 bp | CACATTGATCACTGGCTACTTGGCTCTCATGGGTTCTGTGGCAAATaGCCAGGTTCAGTCATTCAGCCGAGGTGCAGGACAGAGATCTTA | + |
Preference number: 1 (lower is better) Translates to: HIDHWLLGSHGFCGK*PGSVIQPRCRTEIL Trigger: TAAGATCTCTGTCCTGCACCTCGGCTGAATGACTGAACCTGGTCATTTGCCACAGAACCCATGAGAGCCAAGTAGCCAGTGATCAATGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR GCA 90 bp | GGTCTTCTCATGCAAACCAGGCCTTCTCATAAAGGCAAAGAGGGGTaGTGGGGTACATCTATTCCTCAAACTGTGGGAGACTGGGAAACA | + |
Preference number: 1 (lower is better) Translates to: GLLMQTRPSHKGKEG*WGTSIPQTVGDWET Trigger: TGTTTCCCAGTCTCCCACAGTTTGAGGAATAGATGTACCCCAGCACCCCTCTTTGCCTTTATGAGAAGGCCTGGTTTGCATGAGAAGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR CCA 90 bp | TACTGTGGGCTCAAGGGATCCTTGGGCTTACAGCTTTTCTTTTGGTaGCTCCCTGTAATGCCTCGTTTCCCAATTACCTCCTCCCTCTTT | + |
Preference number: 1 (lower is better) Translates to: YCGLKGSLGLQLFFW*LPVMPRFPITSSLF Trigger: AAAGAGGGAGGAGGTAATTGGGAAACGAGGCATTACAGGGAGCCACCAAAAGAAAAGCTGTAAGCCCAAGGATCCCTTGAGCCCACAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR TCA 90 bp | TTAACACCAAGGAAAACAGGGGTTGCTGCTGAAATTGACAGCTTCTaGAGGGAGAGACACCTCCTAGTCATTCAGTGGCATTCAGCAGGT | + |
Preference number: 1 (lower is better) Translates to: LTPRKTGVAAEIDSF*RERHLLVIQWHSAG Trigger: ACCTGCTGAATGCCACTGAATGACTAGGAGGTGTCTCTCCCTTCAGAAGCTGTCAATTTCAGCAGCAACCCCTGTTTTCCTTGGTGTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR TCA 90 bp | GCGTCCAGTACATTATTGATGGGGCATGTGAACTTGTTAATGGCTTaGCACTGTTCTCTGGCAGGAGTTTATGAGGAATATTTGGGGGCG | + |
Preference number: 1 (lower is better) Translates to: ASSTLLMGHVNLLMA*HCSLAGVYEEYLGA Trigger: CGCCCCCAAATATTCCTCATAAACTCCTGCCAGAGAACAGTGTCAAGCCATTAACAAGTTCACATGCCCCATCAATAATGTACTGGACGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR GCA 90 bp | ATGTTTCGTTATTCAAGGGGAGAACAGAAACCACTGGCCAGAGGCTaGAGTTGTCATTACCCTTACATGATGACTTTAGTGCACGCAACC | + |
Preference number: 1 (lower is better) Translates to: MFRYSRGEQKPLARG*SCHYPYMMTLVHAT Trigger: GGTTGCGTGCACTAAAGTCATCATGTAAGGGTAATGACAACTGCAGCCTCTGGCCAGTGGTTTCTGTTCTCCCCTTGAATAACGAAACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR TCA 90 bp | GTGCAAATAGGCTCCTGTCTCAATTCATCAGTTAGAAAACCAGTTTaGAATGGTTCAGTAAGCTGGGTGGTGGTGGCGCACGCCTTTAAT | + |
Preference number: 1 (lower is better) Translates to: VQIGSCLNSSVRKPV*NGSVSWVVVAHAFN Trigger: ATTAAAGGCGTGCGCCACCACCACCCAGCTTACTGAACCATTTCAAACTGGTTTTCTAACTGATGAATTGAGACAGGAGCCTATTTGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR TCA 90 bp | TCTTATTCTGCCCCAAAGTTTGACAAGTCCATTAATTCAGCACATTaGTCACTGGCTACTTGGCTCTCATGGGTTCTGTGGCAAATGACC | + |
Preference number: 1 (lower is better) Translates to: SYSAPKFDKSINSAH*SLATWLSWVLWQMT Trigger: GGTCATTTGCCACAGAACCCATGAGAGCCAAGTAGCCAGTGATCAATGTGCTGAATTAATGGACTTGTCAAACTTTGGGGCAGAATAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR CCA 90 bp | ACGAGGGGAGAGCTAAGTAACACTACAAACAATTTGGTCTTCTCATaGAAGTGCAATTTGGTCTTCTCATGCAAACCAGGCCTTCTCATA | + |
Preference number: 1 (lower is better) Translates to: TRGELSNTTNNLVFS*KCNLVFSCKPGLLI Trigger: TATGAGAAGGCCTGGTTTGCATGAGAAGACCAAATTGCACTTCCATGAGAAGACCAAATTGTTTGTAGTGTTACTTAGCTCTCCCCTCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR TCA 90 bp | TGCATAAAGCACAATGCACACTCTACTGAACAATCACTCCCCAGCTaGAACCACAGAGAAACTTCACTTAAAATCAGTAACTTGGAGAGC | + |
Preference number: 1 (lower is better) Translates to: CIKHNAHSTEQSLPS*NHRETSLKISNLES Trigger: GCTCTCCAAGTTACTGATTTTAAGTGAAGTTTCTCTGTGGTTTCAGCTGGGGAGTGATTGTTCAGTAGAGTGTGCATTGTGCTTTATGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR CCA 90 bp | GGAAAGACACACACCAAGCCACTTAAGATGATTTATGTACATTTATaGCTTTATACAACGCACAGTAAGGATTGTTCTTGTGTCTGTAAG | + |
Preference number: 1 (lower is better) Translates to: GKTHTKPLKMIYVHL*LYTTHSKDCSCVCK Trigger: CTTACAGACACAAGAACAATCCTTACTGTGCGTTGTATAAAGCCATAAATGTACATAAATCATCTTAAGTGGCTTGGTGTGTGTCTTTCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR-3UTR CCA 90 bp | GGCGAAGGGCGGGACTCTATCCTGACGGGCTGTCTGTCTGTCCCCGGCCACAGGACACAGGGCATCATCTaGCAGGCTTCCCTAGAAGGC | + |
Preference number: 2 (lower is better) Translates to: GEGRDSILTGCLSVPGHRTQGII*QASLEG Trigger: GCCTTCTAGGGAAGCCTGCCAGATGATGCCCTGTGT...CCTGTGGCCGGGGACAGACAGACAGCCCGTCAGGATAGAGTCCCGCCCTTCGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR-3UTR GCA 90 bp | GGCGAAGGGCGGGACTCTATCCTGACGGGCTGTCTGTCTGTCCCCGGCCACAGGGTCATTCAGCCGAGGTaGAGGACAGAGATCTTAGTT | + |
Preference number: 2 (lower is better) Translates to: GEGRDSILTGCLSVPGHRVIQPR*RTEILV Trigger: AACTAAGATCTCTGTCCTGCACCTCGGCTGAATGAC...CCTGTGGCCGGGGACAGACAGACAGCCCGTCAGGATAGAGTCCCGCCCTTCGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR-3UTR GCA 90 bp | TCTATCCTGACGGGCTGTCTGTCTGTCCCCGGCCACAGGGCCAGGCTGTTTGGTTCCTGGAGTTCACTGTaGCCCAGACAACTGCCCATG | + |
Preference number: 2 (lower is better) Translates to: SILTGCLSVPGHRARLFGSWSSL*PRQLPM Trigger: CATGGGCAGTTGTCTGGGGCACAGTGAACTCCAGGA...ACCAAACAGCCTGGCCCTGTGGCCGGGGACAGACAGACAGCCCGTCAGGATAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR-3UTR CCA 90 bp | CACAAAACCTGCGGACGCTGGGCAAACATCCTGCACAGGAAAGTGCTGCCGCTGGGTGAAGGGCATCTTTaGACTGCTCCTCAGTTCCTG | + |
Preference number: 2 (lower is better) Translates to: HKTCGRWANILHRKVLPLGEGHL*TAPQFL Trigger: CAGGAACTGAGGAGCAGTCCAAAGATGCCCTTCACC...CAGCGGCAGCACTTTCCTGTGCAGGATGTTTGCCCAGCGTCCGCAGGTTTTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR-3UTR GCA 90 bp | GGGCTCAAGGGATCCTTGGGCTTACAGCTTTTCTTTTGGTGGCTCCCTGTAATGCAAGAGCAAACACACTaGCACCCCTCTGCGCTGCAG | + |
Preference number: 2 (lower is better) Translates to: GLKGSLGLQLFFWWLPVMQEQTH*HPSALQ Trigger: CTGCAGCGCAGAGGGGTGGCAGTGTGTTTGCTCTTG...CATTACAGGGAGCCACCAAAAGAAAAGCTGTAAGCCCAAGGATCCCTTGAGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR-3UTR CCA 90 bp | GGGCTCAAGGGATCCTTGGGCTTACAGCTTTTCTTTTGGTGGCTCCCTGTAATGGAGAACAGAAACCACTaGCCAGAGGCTGCAGTTGTC | + |
Preference number: 2 (lower is better) Translates to: GLKGSLGLQLFFWWLPVMENRNH*PEAAVV Trigger: GACAACTGCAGCCTCTGGCCAGTGGTTTCTGTTCTC...CATTACAGGGAGCCACCAAAAGAAAAGCTGTAAGCCCAAGGATCCCTTGAGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR-3UTR TCA 90 bp | CCCTGTAATGCCTCGTTTCCCAATTACCTCCTCCCTCTTTCCTTCTTCAGCCATAAAGTTCCCCTTTCCTaGGCGACAGACAGAGTTCCC | + |
Preference number: 2 (lower is better) Translates to: PCNASFPNYLLPLSFFSHKVPLS*ATDRVP Trigger: GGGAACTCTGTCTGTCGCTCAGGAAAGGGGAACTTT...ATGGCTGAAGAAGGAAAGAGGGAGGAGGTAATTGGGAAACGAGGCATTACAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR-3UTR GCA 90 bp | GACAGACAGAGTTCCCATGGGAACTATGACAGCGTGACACAGGGCATCATCTGGGAAGACTTGGTGCTATaGGCTGTACACAACTCACAG | + |
Preference number: 2 (lower is better) Translates to: DRQSSHGNYDSVTQGIIWEDLVL*AVHNSQ Trigger: CTGTGAGTTGTGTACAGCGCATAGCACCAAGTCTTC...CCAGATGATGCCCTGTGTCACGCTGTCATAGTTCCCATGGGAACTCTGTCTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR-3UTR GCA 90 bp | CCCTGTAATGCCTCGTTTCCCAATTACCTCCTCCCTCTTTCCTTCTTCAGCCATCAGGAGCAAGGCATCTaGACTGTTACTCAAGTCCGC | + |
Preference number: 2 (lower is better) Translates to: PCNASFPNYLLPLSFFSHQEQGI*TVTQVR Trigger: GCGGACTTGAGTAACAGTGCAGATGCCTTGCTCCTG...ATGGCTGAAGAAGGAAAGAGGGAGGAGGTAATTGGGAAACGAGGCATTACAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR-3UTR CCA 90 bp | CAAACACACTGCCACCCCTCTGCGCTGCAGCCAGAGATCCTCTCTGAACAAAATCTATTCCTCAAACTGTaGGAGACTGGGAAACACCGA | + |
Preference number: 2 (lower is better) Translates to: QTHCHPSALQPEILSEQNLFLKL*ETGKHR Trigger: TCGGTGTTTCCCAGTCTCCCACAGTTTGAGGAATAG...ATTTTGTTCAGAGAGGATCTCTGGCTGCAGCGCAGAGGGGTGGCAGTGTGTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR-3UTR CCA 90 bp | GGGCTCAAGGGATCCTTGGGCTTACAGCTTTTCTTTTGGTGGCTCCCTGTAATGGGGTCAGCCCTCCTATaGAACTCAACCATACAACCA | + |
Preference number: 2 (lower is better) Translates to: GLKGSLGLQLFFWWLPVMGSALL*NSTIQP Trigger: TGGTTGTATGGTTGAGTTCCATAGGAGGGCTGACCC...CATTACAGGGAGCCACCAAAAGAAAAGCTGTAAGCCCAAGGATCCCTTGAGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR CAA 90 bp | GTGTCTGGCAGGATGTGCTTCAGAGACTTGTTCTTAGTACAGCTCTaGGGGTCAGCCCTCCTATGGAACTCAACCATACAACCACTGTCA | + |
Preference number: 2 (lower is better) Translates to: VSGRMCFRDLFLVQL*GSALLWNSTIQPLS Trigger: TGACAGTGGTTGTATGGTTGAGTTCCATAGGAGGGCTGACCCCAAGAGCTGTACTAAGAACAAGTCTCTGAAGCACATCCTGCCAGACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR CAA 90 bp | ACAATACTGTGGGCTCAAGGGATCCTTGGGCTTACAGCTTTTCTTTaGGTGGCTCCCTGTAATGCCTCGTTTCCCAATTACCTCCTCCCT | + |
Preference number: 2 (lower is better) Translates to: TILWAQGILGLTAFL*VAPCNASFPNYLLP Trigger: AGGGAGGAGGTAATTGGGAAACGAGGCATTACAGGGAGCCACCAAAAGAAAAGCTGTAAGCCCAAGGATCCCTTGAGCCCACAGTATTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR-3UTR TCA 90 bp | GAACAAAATGTATACTTGGGATCATTTGGCCTGGGAAAGCCACCCTGTCGGCCAGGGTTCTGTGGCAAATaGCCAGGTTCAGTCATTCAG | + |
Preference number: 2 (lower is better) Translates to: EQNVYLGSFGLGKPPCRPGFCGK*PGSVIQ Trigger: CTGAATGACTGAACCTGGTCATTTGCCACAGAACCC...TGGCCGACAGGGTGGCTTTCCCAGGCCAAATGATCCCAAGTATACATTTTGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR-3UTR TCA 90 bp | AGATCAGGCTGGCCTCTAACTCTGAGAGACCCACTTATCTCTGACTACCAAGTGCTGGCCAACGGTGGGTaGAAGCAGGGACATTTTATT | + |
Preference number: 2 (lower is better) Translates to: RSGWPLTLRDPLISDYQVLANGG*KQGHFI Trigger: AATAAAATGTCCCTGCTTTCACCCACCGTTGGCCAG...CACTTGGTAGTCAGAGATAAGTGGGTCTCTCAGAGTTAGAGGCCAGCCTGATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR-3UTR TCA 90 bp | CCCTGTAATGCCTCGTTTCCCAATTACCTCCTCCCTCTTTCCTTCTTCAGCCATCAGACCCGGGTTCTTTaGCACCAGGAAATTCTACTC | + |
Preference number: 2 (lower is better) Translates to: PCNASFPNYLLPLSFFSHQTRVL*HQEILL Trigger: GAGTAGAATTTCCTGGTGTCAAAGAACCCGGGTCTG...ATGGCTGAAGAAGGAAAGAGGGAGGAGGTAATTGGGAAACGAGGCATTACAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR-3UTR CCA 90 bp | GAACAAAATGTATACTTGGGATCATTTGGCCTGGGAAAGCCACCCTGTCGGCCAAAAGCTGGCCAACGGTaGGTGAAAGCAGGGACATTT | + |
Preference number: 2 (lower is better) Translates to: EQNVYLGSFGLGKPPCRPKAGQR*VKAGTF Trigger: AAATGTCCCTGCTTTCACCCACCGTTGGCCAGCTTT...TGGCCGACAGGGTGGCTTTCCCAGGCCAAATGATCCCAAGTATACATTTTGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR-3UTR CCA 90 bp | CAAACACACTGCCACCCCTCTGCGCTGCAGCCAGAGATCCTCTCTGAACAAAATCAGACTCTAGGCCAGTaGTTCTCAACTTTCCTAATG | + |
Preference number: 2 (lower is better) Translates to: QTHCHPSALQPEILSEQNQTLGQ*FSTFLM Trigger: CATTAGGAAAGTTGAGAACCACTGGCCTAGAGTCTG...ATTTTGTTCAGAGAGGATCTCTGGCTGCAGCGCAGAGGGGTGGCAGTGTGTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR-3UTR CCA 90 bp | GGGCTCAAGGGATCCTTGGGCTTACAGCTTTTCTTTTGGTGGCTCCCTGTAATGCCATATAGATCAGGCTaGCCTCTAACTCTGAGAGAC | + |
Preference number: 2 (lower is better) Translates to: GLKGSLGLQLFFWWLPVMPYRSG*PLTLRD Trigger: GTCTCTCAGAGTTAGAGGCCAGCCTGATCTATATGG...CATTACAGGGAGCCACCAAAAGAAAAGCTGTAAGCCCAAGGATCCCTTGAGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR-3UTR CCA 90 bp | TCGTCTGCTTGTCTGGTAGAGGGAAAAGAGCAGAACCTTCTTTTAAAGCAGTCATGGGATCATTTGGCCTaGGAAAGCCACCCTGTCGGC | + |
Preference number: 2 (lower is better) Translates to: SSACLVEGKEQNLLLKQSWDHLA*ESHPVG Trigger: GCCGACAGGGTGGCTTTCCCAGGCCAAATGATCCCA...TGACTGCTTTAAAAGAAGGTTCTGCTCTTTTCCCTCTACCAGACAAGCAGACGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR-3UTR TCA 90 bp | CAAACACACTGCCACCCCTCTGCGCTGCAGCCAGAGATCCTCTCTGAACAAAATCGGAGCTCACACGTTTaGTGTTTGTTTTCAAAACAG | + |
Preference number: 2 (lower is better) Translates to: QTHCHPSALQPEILSEQNRSSHV*CLFSKQ Trigger: CTGTTTTGAAAACAAACATCAAACGTGTGAGCTCCG...ATTTTGTTCAGAGAGGATCTCTGGCTGCAGCGCAGAGGGGTGGCAGTGTGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR-3UTR TCA 90 bp | CCCTGTAATGCCTCGTTTCCCAATTACCTCCTCCCTCTTTCCTTCTTCAGCCATCAATCACTCCCCAGCTaGAACCACAGAGAAACTTCA | + |
Preference number: 2 (lower is better) Translates to: PCNASFPNYLLPLSFFSHQSLPS*NHRETS Trigger: TGAAGTTTCTCTGTGGTTTCAGCTGGGGAGTGATTG...ATGGCTGAAGAAGGAAAGAGGGAGGAGGTAATTGGGAAACGAGGCATTACAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR-3UTR GCA 90 bp | AGATCAGGCTGGCCTCTAACTCTGAGAGACCCACTTATCTCTGACTACCAAGTGAAAGGCAAAGAGGGGTaGTGGGGTACATCTATTCCT | + |
Preference number: 2 (lower is better) Translates to: RSGWPLTLRDPLISDYQVKGKEG*WGTSIP Trigger: AGGAATAGATGTACCCCAGCACCCCTCTTTGCCTTT...CACTTGGTAGTCAGAGATAAGTGGGTCTCTCAGAGTTAGAGGCCAGCCTGATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR CAA 90 bp | CAAAGTTGCTCTTTCTTCCCGGAGGCCGAGAATCTACTCCTTCAGTaGGCAGCGTCCAGTACATTATTGATGGGGCATGTGAACTTGTTA | + |
Preference number: 2 (lower is better) Translates to: QSCSFFPEAENLLLQ*AASSTLLMGHVNLL Trigger: TAACAAGTTCACATGCCCCATCAATAATGTACTGGACGCTGCCAACTGAAGGAGTAGATTCTCGGCCTCCGGGAAGAAAGAGCAACTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR-3UTR TCA 90 bp | GACAGACAGAGTTCCCATGGGAACTATGACAGCGTGACACAGGGCATCATCTGGGCCCCCAAATACCTCTaGTTTCACAAATTTATAAGC | + |
Preference number: 2 (lower is better) Translates to: DRQSSHGNYDSVTQGIIWAPKYL*FHKFIS Trigger: GCTTATAAATTTGTGAAATCAGAGGTATTTGGGGGC...CCAGATGATGCCCTGTGTCACGCTGTCATAGTTCCCATGGGAACTCTGTCTGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
||
3UTR-3UTR GCA 90 bp | AGATCAGGCTGGCCTCTAACTCTGAGAGACCCACTTATCTCTGACTACCAAGTGAGTCCTGTTTTGGAGTaGCCAAACAAAGGTAGTCAG | + |
Preference number: 2 (lower is better) Translates to: RSGWPLTLRDPLISDYQVSPVLE*PNKGSQ Trigger: CTGACTACCTTTGTTTGGGCACTCCAAAACAGGACT...CACTTGGTAGTCAGAGATAAGTGGGTCTCTCAGAGTTAGAGGCCAGCCTGATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
||
3UTR-3UTR GCA 90 bp | CCCTGTAATGCCTCGTTTCCCAATTACCTCCTCCCTCTTTCCTTCTTCAGCCATGTGTCTGGCAGGATGTaGTTCAGAGACTTGTTCTTA | + |
Preference number: 2 (lower is better) Translates to: PCNASFPNYLLPLSFFSHVSGRM*FRDLFL Trigger: TAAGAACAAGTCTCTGAAGCACATCCTGCCAGACAC...ATGGCTGAAGAAGGAAAGAGGGAGGAGGTAATTGGGAAACGAGGCATTACAGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
||
3UTR CAA 90 bp | AGGGGTCATTCCTCACACACTGAGAACCATTGCTCTCTAGACGGTTaGCTAAGTTTAGATTGCACTTCTTCACATCAGGGGCCATGGTTT | + |
Preference number: 2 (lower is better) Translates to: RGHSSHTENHCSLDG*LSLDCTSSHQGPWF Trigger: AAACCATGGCCCCTGATGTGAAGAAGTGCAATCTAAACTTAGCAAACCGTCTAGAGAGCAATGGTTCTCAGTGTGTGAGGAATGACCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
||
3UTR CAA 90 bp | AATGATGTAAGGTTTACTGTGTCTGGCAGGATGTGCTTCAGAGACTaGTTCTTAGTACAGCTCTTGGGGTCAGCCCTCCTATGGAACTCA | + |
Preference number: 2 (lower is better) Translates to: NDVRFTVSGRMCFRD*FLVQLLGSALLWNS Trigger: TGAGTTCCATAGGAGGGCTGACCCCAAGAGCTGTACTAAGAACAAGTCTCTGAAGCACATCCTGCCAGACACAGTAAACCTTACATCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR-3UTR TCA 90 bp | GGGCTCAAGGGATCCTTGGGCTTACAGCTTTTCTTTTGGTGGCTCCCTGTAATGAAGCACTCCAGGATCTaGAAGTCTTTTCTGCAATTA | + |
Preference number: 2 (lower is better) Translates to: GLKGSLGLQLFFWWLPVMKHSRI*KSFLQL Trigger: TAATTGCAGAAAAGACTTTCAGATCCTGGAGTGCTT...CATTACAGGGAGCCACCAAAAGAAAAGCTGTAAGCCCAAGGATCCCTTGAGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
||
3UTR-3UTR TCA 90 bp | GGGCTCAAGGGATCCTTGGGCTTACAGCTTTTCTTTTGGTGGCTCCCTGTAATGACACACCAAAGGAAATaGATCAAACAAGGCTGCATA | + |
Preference number: 2 (lower is better) Translates to: GLKGSLGLQLFFWWLPVMTHQRK*IKQGCI Trigger: TATGCAGCCTTGTTTGATTCATTTCCTTTGGTGTGT...CATTACAGGGAGCCACCAAAAGAAAAGCTGTAAGCCCAAGGATCCCTTGAGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR-3UTR GCA 90 bp | GGGCTCAAGGGATCCTTGGGCTTACAGCTTTTCTTTTGGTGGCTCCCTGTAATGGGTTTCAGGGCTTCCTaGTCATCAGGATATATTATT | + |
Preference number: 2 (lower is better) Translates to: GLKGSLGLQLFFWWLPVMGFRAS*SSGYII Trigger: AATAATATATCCTGATGAGCAGGAAGCCCTGAAACC...CATTACAGGGAGCCACCAAAAGAAAAGCTGTAAGCCCAAGGATCCCTTGAGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
||
3UTR-3UTR CCA 90 bp | TCTACTTGGAGGAGTTCATTTCTAAAACAAGTCCTGTTTTGGAGTGCCCAAACAAAAACCTGCGGACGCTaGGCAAACATCCTGCACAGG | + |
Preference number: 2 (lower is better) Translates to: STWRSSFLKQVLFWSAQTKTCGR*ANILHR Trigger: CCTGTGCAGGATGTTTGCCCAGCGTCCGCAGGTTTT...TGTTTGGGCACTCCAAAACAGGACTTGTTTTAGAAATGAACTCCTCCAAGTAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR-3UTR CCA 90 bp | GGGCTCAAGGGATCCTTGGGCTTACAGCTTTTCTTTTGGTGGCTCCCTGTAATGCATGCTTATAATTACTaGCCTAAATGGGGTTCCAGA | + |
Preference number: 2 (lower is better) Translates to: GLKGSLGLQLFFWWLPVMHAYNY*PKWGSR Trigger: TCTGGAACCCCATTTAGGCCAGTAATTATAAGCATG...CATTACAGGGAGCCACCAAAAGAAAAGCTGTAAGCCCAAGGATCCCTTGAGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
||
3UTR-3UTR TCA 90 bp | GGCTGGTTTCCAAGTTTACTGCCTTCATTTTTAACTAATCCTGCCACTGTCTGTCGCTGTTGCCAAGTCTaGGGAAAGGAGAAAGGACTT | + |
Preference number: 2 (lower is better) Translates to: GWFPSLLPSFLTNPATVCRCCQV*GKEKGL Trigger: AAGTCCTTTCTCCTTTCCTCAGACTTGGCAACAGCG...ACAGACAGTGGCAGGATTAGTTAAAAATGAAGGCAGTAAACTTGGAAACCAGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR-3UTR GCA 90 bp | GAACAAAATGTATACTTGGGATCATTTGGCCTGGGAAAGCCACCCTGTCGGCCATTGCTAAGTTTAGATTaGACTTCTTCACATCAGGGG | + |
Preference number: 2 (lower is better) Translates to: EQNVYLGSFGLGKPPCRPLLSLD*TSSHQG Trigger: CCCCTGATGTGAAGAAGTGCAATCTAAACTTAGCAA...TGGCCGACAGGGTGGCTTTCCCAGGCCAAATGATCCCAAGTATACATTTTGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR-3UTR TCA 90 bp | TCGTCTGCTTGTCTGGTAGAGGGAAAAGAGCAGAACCTTCTTTTAAAGCAGTCAGCCAGAGATCCTCTCTaGACAAAATGTATACTTGGG | + |
Preference number: 2 (lower is better) Translates to: SSACLVEGKEQNLLLKQSARDPL*TKCILG Trigger: CCCAAGTATACATTTTGTTCAGAGAGGATCTCTGGC...TGACTGCTTTAAAAGAAGGTTCTGCTCTTTTCCCTCTACCAGACAAGCAGACGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR-3UTR CCA 90 bp | GAACAAAATGTATACTTGGGATCATTTGGCCTGGGAAAGCCACCCTGTCGGCCAAATTTGGTCTTCTCATaGAAGTGCAATTTGGTCTTC | + |
Preference number: 2 (lower is better) Translates to: EQNVYLGSFGLGKPPCRPNLVFS*KCNLVF Trigger: GAAGACCAAATTGCACTTCCATGAGAAGACCAAATT...TGGCCGACAGGGTGGCTTTCCCAGGCCAAATGATCCCAAGTATACATTTTGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR-3UTR CCA 90 bp | GAACAAAATGTATACTTGGGATCATTTGGCCTGGGAAAGCCACCCTGTCGGCCAACACTACAAACAATTTaGTCTTCTCATGGAAGTGCA | + |
Preference number: 2 (lower is better) Translates to: EQNVYLGSFGLGKPPCRPTLQTI*SSHGSA Trigger: TGCACTTCCATGAGAAGACCAAATTGTTTGTAGTGT...TGGCCGACAGGGTGGCTTTCCCAGGCCAAATGATCCCAAGTATACATTTTGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR CAA 90 bp | AAGACCTGTACAAAGCTGGCACTTAATCTTATTCTGCCCCAAAGTTaGACAAGTCCATTAATTCAGCACATTGATCACTGGCTACTTGGC | + |
Preference number: 2 (lower is better) Translates to: KTCTKLALNLILPQS*TSPLIQHIDHWLLG Trigger: GCCAAGTAGCCAGTGATCAATGTGCTGAATTAATGGACTTGTCAAACTTTGGGGCAGAATAAGATTAAGTGCCAGCTTTGTACAGGTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR-3UTR TCA 90 bp | TCGTCTGCTTGTCTGGTAGAGGGAAAAGAGCAGAACCTTCTTTTAAAGCAGTCAAGAGATCTTAGTTCATaGCTTCTCACTGTAGCAGAA | + |
Preference number: 2 (lower is better) Translates to: SSACLVEGKEQNLLLKQSRDLSS*LLTVAE Trigger: TTCTGCTACAGTGAGAAGTCATGAACTAAGATCTCT...TGACTGCTTTAAAAGAAGGTTCTGCTCTTTTCCCTCTACCAGACAAGCAGACGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR-3UTR CCA 90 bp | AGTCTTTTCACAGAGCAATCATGTACAATAATAGACCAGAAAGCGAACATTCTCATACGAAGCCTTTCCTaGAGTTCACTGTGCCCCAGA | + |
Preference number: 2 (lower is better) Translates to: SLFTEQSCTIIDQKANILIRSLS*SSLCPR Trigger: TCTGGGGCACAGTGAACTCCAGGAAAGGCTTCGTAT...GAGAATGTTCGCTTTCTGGTCTATTATTGTACATGATTGCTCTGTGAAAAGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR-3UTR CCA 90 bp | TCGTCTGCTTGTCTGGTAGAGGGAAAAGAGCAGAACCTTCTTTTAAAGCAGTCATTTTCTGCAATTACATaGTGTAGTGAGTTTGGCACT | + |
Preference number: 2 (lower is better) Translates to: SSACLVEGKEQNLLLKQSFSAIT*CSEFGT Trigger: AGTGCCAAACTCACTACACCATGTAATTGCAGAAAA...TGACTGCTTTAAAAGAAGGTTCTGCTCTTTTCCCTCTACCAGACAAGCAGACGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR-3UTR CCA 90 bp | TCTACTTGGAGGAGTTCATTTCTAAAACAAGTCCTGTTTTGGAGTGCCCAAACAAGACCTGTACAAAGCTaGCACTTAATCTTATTCTGC | + |
Preference number: 2 (lower is better) Translates to: STWRSSFLKQVLFWSAQTRPVQS*HLILFC Trigger: GCAGAATAAGATTAAGTGCCAGCTTTGTACAGGTCT...TGTTTGGGCACTCCAAAACAGGACTTGTTTTAGAAATGAACTCCTCCAAGTAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR CAA 90 bp | CACAACTATGTGCACGAGCCTCAGGGTTTAGCTTGTCTTTTGATTTaGGGTTATATATATTGGCCTTTGGGTACTACATTTTCAAAGAAC | + |
Preference number: 2 (lower is better) Translates to: HNYVHEPQGLACLLI*GYIYWPLGTTFSKN Trigger: GTTCTTTGAAAATGTAGTACCCAAAGGCCAATATATATAACCCAAAATCAAAAGACAAGCTAAACCCTGAGGCTCGTGCACATAGTTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR TCA 72 bp | AAGTCCGCTGTGGTGGCGAAGGGCGGGACTCTATCCTaGCGGGCTGTCTGTCTGTCCCCGGCCACAGGGCCA | + |
Preference number: 3 (lower is better) Translates to: KSAVVAKGGTLS*RAVCLSPATGP Trigger: TGGCCCTGTGGCCGGGGACAGACAGACAGCCCGTCAGGATAGAGTCCCGCCCTTCGCCACCACAGCGGACTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR-3UTR CAA 90 bp | GGCGAAGGGCGGGACTCTATCCTGACGGGCTGTCTGTCTGTCCCCGGCCACAGGAAAGGGCCAGGAACGTaGAGTGTGCAAGTACTAATT | + |
Preference number: 3 (lower is better) Translates to: GEGRDSILTGCLSVPGHRKGPGT*SVQVLI Trigger: AATTAGTACTTGCACACTCAACGTTCCTGGCCCTTT...CCTGTGGCCGGGGACAGACAGACAGCCCGTCAGGATAGAGTCCCGCCCTTCGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR-3UTR CAA 90 bp | GGCGAAGGGCGGGACTCTATCCTGACGGGCTGTCTGTCTGTCCCCGGCCACAGGTCGGAGCTCACACGTTaGATGTTTGTTTTCAAAACA | + |
Preference number: 3 (lower is better) Translates to: GEGRDSILTGCLSVPGHRSELTR*MFVFKT Trigger: TGTTTTGAAAACAAACATCAAACGTGTGAGCTCCGA...CCTGTGGCCGGGGACAGACAGACAGCCCGTCAGGATAGAGTCCCGCCCTTCGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR GCA 72 bp | GACAGAGCCATCTCAGGAGCAAGGGGAAGAGAGGAATaGCAGCACCATCAGCCATTCTTACCCACCAGACTC | + |
Preference number: 3 (lower is better) Translates to: DRAISGARGREE*QHHQPFLPTRL Trigger: GAGTCTGGTGGGTAAGAATGGCTGATGGTGCTGGCATTCCTCTCTTCCCCTTGCTCCTGAGATGGCTCTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR CCA 72 bp | AGTCCTTATCTACAGGAGCACAAAACCTGCGGACGCTaGGCAAACATCCTGCACAGGAAAGTGCTGCCGCTG | + |
Preference number: 3 (lower is better) Translates to: SPYLQEHKTCGR*ANILHRKVLPL Trigger: CAGCGGCAGCACTTTCCTGTGCAGGATGTTTGCCCAGCGTCCGCAGGTTTTGTGCTCCTGTAGATAAGGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR CCA 72 bp | CATGGGAACTATGACAGCGTGACACAGGGCATCATCTaGCAGGCTTCCCTAGAAGGCTGTAAGCACGTGGCA | + |
Preference number: 3 (lower is better) Translates to: HGNYDSVTQGII*QASLEGCKHVA Trigger: TGCCACGTGCTTACAGCCTTCTAGGGAAGCCTGCCAGATGATGCCCTGTGTCACGCTGTCATAGTTCCCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR TCA 72 bp | TTTCCTGAGCGACAGACAGAGTTCCCATGGGAACTATaGCAGCGTGACACAGGGCATCATCTGGCAGGCTTC | + |
Preference number: 3 (lower is better) Translates to: FPERQTEFPWEL*QRDTGHHLAGF Trigger: GAAGCCTGCCAGATGATGCCCTGTGTCACGCTGTCATAGTTCCCATGGGAACTCTGTCTGTCGCTCAGGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR TCA 72 bp | TCAGAGCCAAAGAGAACAGAGGTGGGGACCGAGAAGTaGCAGGATTCTTCAGGACAGAGCCACAAAGCCACC | + |
Preference number: 3 (lower is better) Translates to: SEPKRTEVGTEK*QDSSGQSHKAT Trigger: GGTGGCTTTGTGGCTCTGTCCTGAAGAATCCTGTCACTTCTCGGTCCCCACCTCTGTTCTCTTTGGCTCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR-3UTR CAA 90 bp | TCTATCCTGACGGGCTGTCTGTCTGTCCCCGGCCACAGGGCCAGGCTGTTTGGTAACACTACAAACAATTaGGTCTTCTCATGGAAGTGC | + |
Preference number: 3 (lower is better) Translates to: SILTGCLSVPGHRARLFGNTTNN*VFSWKC Trigger: GCACTTCCATGAGAAGACCAAATTGTTTGTAGTGTT...ACCAAACAGCCTGGCCCTGTGGCCGGGGACAGACAGACAGCCCGTCAGGATAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR GCA 72 bp | CAATGGCACAGTCCTTATCTACAGGAGCACAAAACCTaGGGACGCTGGGCAAACATCCTGCACAGGAAAGTG | + |
Preference number: 3 (lower is better) Translates to: QWHSPYLQEHKT*GRWANILHRKV Trigger: CACTTTCCTGTGCAGGATGTTTGCCCAGCGTCCGCAGGTTTTGTGCTCCTGTAGATAAGGACTGTGCCATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR GCA 72 bp | ACTTCTCAGATAGCAATGGAACAGGAGCAAGGCATCTaGACTGTTACTCAAGTCCGCTGTGGTGGCGAAGGG | + |
Preference number: 3 (lower is better) Translates to: TSQIAMEQEQGI*TVTQVRCGGEG Trigger: CCCTTCGCCACCACAGCGGACTTGAGTAACAGTGCAGATGCCTTGCTCCTGTTCCATTGCTATCTGAGAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR-3UTR CAA 90 bp | GACAGACAGAGTTCCCATGGGAACTATGACAGCGTGACACAGGGCATCATCTGGTTGATCACTGGCTACTaGGCTCTCATGGGTTCTGTG | + |
Preference number: 3 (lower is better) Translates to: DRQSSHGNYDSVTQGIIWLITGY*ALMGSV Trigger: CACAGAACCCATGAGAGCCAAGTAGCCAGTGATCAA...CCAGATGATGCCCTGTGTCACGCTGTCATAGTTCCCATGGGAACTCTGTCTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR TCA 72 bp | ATTCTTCAGGACAGAGCCACAAAGCCACCTCCATCGTaGCAAAAGCCAACAGCTCAGAGTAGTAGGAGGCGA | + |
Preference number: 3 (lower is better) Translates to: ILQDRATKPPPS*QKPTAQSSRRR Trigger: TCGCCTCCTACTACTCTGAGCTGTTGGCTTTTGTCACGATGGAGGTGGCTTTGTGGCTCTGTCCTGAAGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR TCA 72 bp | AGAGGGAGGAGGAAAGGGAGACAGACCCGGGTTCTTTaGCACCAGGAAATTCTACTCTGTTTGAAGGAGGCT | + |
Preference number: 3 (lower is better) Translates to: RGRRKGRQTRVL*HQEILLCLKEA Trigger: AGCCTCCTTCAAACAGAGTAGAATTTCCTGGTGTCAAAGAACCCGGGTCTGTCTCCCTTTCCTCCTCCCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR GCA 72 bp | TGTCTGTCCCCGGCCACAGGGCCAGGCTGTTTGGTTTaGATAAAGCACAATGCACACTCTACTGAACAATCA | + |
Preference number: 3 (lower is better) Translates to: CLSPATGPGCLV*IKHNAHSTEQS Trigger: TGATTGTTCAGTAGAGTGTGCATTGTGCTTTATGCAAACCAAACAGCCTGGCCCTGTGGCCGGGGACAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR CCA 72 bp | CAAACCAGGCCTTCTCATAAAGGCAAAGAGGGGTGCTaGGGTACATCTATTCCTCAAACTGTGGGAGACTGG | + |
Preference number: 3 (lower is better) Translates to: QTRPSHKGKEGC*GTSIPQTVGDW Trigger: CCAGTCTCCCACAGTTTGAGGAATAGATGTACCCCAGCACCCCTCTTTGCCTTTATGAGAAGGCCTGGTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR CCA 72 bp | TGCAGCCAGAGATCCTCTCTGAACAAAATGTATACTTaGGATCATTTGGCCTGGGAAAGCCACCCTGTCGGC | + |
Preference number: 3 (lower is better) Translates to: CSQRSSLNKMYT*DHLAWESHPVG Trigger: GCCGACAGGGTGGCTTTCCCAGGCCAAATGATCCCAAGTATACATTTTGTTCAGAGAGGATCTCTGGCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR CCA 72 bp | GGGCTCAAGGGATCCTTGGGCTTACAGCTTTTCTTTTaGTGGCTCCCTGTAATGCCTCGTTTCCCAATTACC | + |
Preference number: 3 (lower is better) Translates to: GLKGSLGLQLFF*WLPVMPRFPIT Trigger: GGTAATTGGGAAACGAGGCATTACAGGGAGCCACCAAAAGAAAAGCTGTAAGCCCAAGGATCCCTTGAGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR GCA 72 bp | ATGCAAACCAGGCCTTCTCATAAAGGCAAAGAGGGGTaGTGGGGTACATCTATTCCTCAAACTGTGGGAGAC | + |
Preference number: 3 (lower is better) Translates to: MQTRPSHKGKEG*WGTSIPQTVGD Trigger: GTCTCCCACAGTTTGAGGAATAGATGTACCCCAGCACCCCTCTTTGCCTTTATGAGAAGGCCTGGTTTGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR CCA 72 bp | GAGCCACCTCCACGAACTTCTAGATGCACAATACTGTaGGCTCAAGGGATCCTTGGGCTTACAGCTTTTCTT | + |
Preference number: 3 (lower is better) Translates to: EPPPRTSRCTIL*AQGILGLTAFL Trigger: AAGAAAAGCTGTAAGCCCAAGGATCCCTTGAGCCCACAGTATTGTGCATCTAGAAGTTCGTGGAGGTGGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR-3UTR CAA 90 bp | ACTTTCCTGCCCAAAGGGCCAGGAACGTTGAGTGTGCAAGTACTAATTACAATGAAAGTGCTGCCGCTGTaGCCAAGTCTGAGGAAAGGA | + |
Preference number: 3 (lower is better) Translates to: TFLPKGPGTLSVQVLITMKVLPL*PSLRKG Trigger: TCCTTTCCTCAGACTTGGCAACAGCGGCAGCACTTT...CATTGTAATTAGTACTTGCACACTCAACGTTCCTGGCCCTTTGGGCAGGAAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR-3UTR CAA 90 bp | GAACAAAATGTATACTTGGGATCATTTGGCCTGGGAAAGCCACCCTGTCGGCCACAAGGAAAACAGGGGTaGCTGCTGAAATTGACAGCT | + |
Preference number: 3 (lower is better) Translates to: EQNVYLGSFGLGKPPCRPQGKQG*LLKLTA Trigger: AGCTGTCAATTTCAGCAGCAACCCCTGTTTTCCTTG...TGGCCGACAGGGTGGCTTTCCCAGGCCAAATGATCCCAAGTATACATTTTGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR-3UTR CAA 90 bp | CCCTGTAATGCCTCGTTTCCCAATTACCTCCTCCCTCTTTCCTTCTTCAGCCATACAGGGCCAGGCTGTTaGGTTTGCATAAAGCACAAT | + |
Preference number: 3 (lower is better) Translates to: PCNASFPNYLLPLSFFSHTGPGC*VCIKHN Trigger: ATTGTGCTTTATGCAAACCAAACAGCCTGGCCCTGT...ATGGCTGAAGAAGGAAAGAGGGAGGAGGTAATTGGGAAACGAGGCATTACAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR TCA 72 bp | GGCTCCTGTCTCAATTCATCAGTTAGAAAACCAGTTTaGAATGGTTCAGTAAGCTGGGTGGTGGTGGCGCAC | + |
Preference number: 3 (lower is better) Translates to: GSCLNSSVRKPV*NGSVSWVVVAH Trigger: GTGCGCCACCACCACCCAGCTTACTGAACCATTTCAAACTGGTTTTCTAACTGATGAATTGAGACAGGAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR TCA 72 bp | GCCCCAAAGTTTGACAAGTCCATTAATTCAGCACATTaGTCACTGGCTACTTGGCTCTCATGGGTTCTGTGG | + |
Preference number: 3 (lower is better) Translates to: APKFDKSINSAH*SLATWLSWVLW Trigger: CCACAGAACCCATGAGAGCCAAGTAGCCAGTGATCAATGTGCTGAATTAATGGACTTGTCAAACTTTGGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR GCA 72 bp | CCCTCAAGGGGTCATTCCTCACACACTGAGAACCATTaGTCTCTAGACGGTTTGCTAAGTTTAGATTGCACT | + |
Preference number: 3 (lower is better) Translates to: PSRGHSSHTENH*SLDGLLSLDCT Trigger: AGTGCAATCTAAACTTAGCAAACCGTCTAGAGAGCAATGGTTCTCAGTGTGTGAGGAATGACCCCTTGAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR CCA 72 bp | TTTAGATTGCACTTCTTCACATCAGGGGCCATGGTTTaGTCATACGCCATTAACACTGGGGTTGACGGTCTA | + |
Preference number: 3 (lower is better) Translates to: FRLHFFTSGAMV*SYAINTGVDGL Trigger: TAGACCGTCAACCCCAGTGTTAATGGCGTATGACCAAACCATGGCCCCTGATGTGAAGAAGTGCAATCTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR TCA 72 bp | CTGGCAGGAGTTTATGAGGAATATTTGGGGGCGATTTaGATGTCTTCTCAGTGTGAACTTCCTCAGGTACCA | + |
Preference number: 3 (lower is better) Translates to: LAGVYEEYLGAI*MSSQCELPQVP Trigger: TGGTACCTGAGGAAGTTCACACTGAGAAGACATTCAAATCGCCCCCAAATATTCCTCATAAACTCCTGCCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
||
3UTR GCA 72 bp | GAGGAGTTCATTTCTAAAACAAGTCCTGTTTTGGAGTaGCCAAACAAAGGTAGTCAGACGAGCAGTGGCTCA | + |
Preference number: 3 (lower is better) Translates to: EEFISKTSPVLE*PNKGSQTSSGS Trigger: TGAGCCACTGCTCGTCTGACTACCTTTGTTTGGGCACTCCAAAACAGGACTTGTTTTAGAAATGAACTCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR GCA 72 bp | TATTCAAGGGGAGAACAGAAACCACTGGCCAGAGGCTaGAGTTGTCATTACCCTTACATGATGACTTTAGTG | + |
Preference number: 3 (lower is better) Translates to: YSRGEQKPLARG*SCHYPYMMTLV Trigger: CACTAAAGTCATCATGTAAGGGTAATGACAACTGCAGCCTCTGGCCAGTGGTTTCTGTTCTCCCCTTGAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR GCA 72 bp | CTCAAATACCAGGAGTTAAGAAGCCTTTTGCAAAGTTaGTCTTTCTTCCCGGAGGCCGAGAATCTACTCCTT | + |
Preference number: 3 (lower is better) Translates to: LKYQELRSLLQS*SFFPEAENLLL Trigger: AAGGAGTAGATTCTCGGCCTCCGGGAAGAAAGAGCAACTTTGCAAAAGGCTTCTTAACTCCTGGTATTTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
||
3UTR TCA 72 bp | CTGTTTGGTTTGCATAAAGCACAATGCACACTCTACTaGACAATCACTCCCCAGCTGAAACCACAGAGAAAC | + |
Preference number: 3 (lower is better) Translates to: LFGLHKAQCTLY*TITPQLKPQRN Trigger: GTTTCTCTGTGGTTTCAGCTGGGGAGTGATTGTTCAGTAGAGTGTGCATTGTGCTTTATGCAAACCAAACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR TCA 72 bp | TCACTGCATCCCAGTTATAGGCCCAGAAGCCTGTCCTaGGCACTTTTAAATGATGTAAGGTTTACTGTGTCT | + |
Preference number: 3 (lower is better) Translates to: SLHPSYRPRSLS*ALLNDVRFTVS Trigger: AGACACAGTAAACCTTACATCATTTAAAAGTGCTCAGGACAGGCTTCTGGGCCTATAACTGGGATGCAGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR TCA 72 bp | TCTTTCCTTCTTCAGCCATTTCCAAGTCAGTGGACTTaGAAGCACCTTAAGCCTGTGTATGCACATCGTCAT | + |
Preference number: 3 (lower is better) Translates to: SFLLQPFPSQWT*KHLKPVYAHRH Trigger: ATGACGATGTGCATACACAGGCTTAAGGTGCTTTCAAGTCCACTGACTTGGAAATGGCTGAAGAAGGAAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
||
3UTR TCA 72 bp | TGCCAGTCTGGGATGAGAGGAATGTCCTCAAACTGTTaGGCCAAAGTCTTGTCACTTTATTTCAGCAACGAA | + |
Preference number: 3 (lower is better) Translates to: CQSGMRGMSSNC*AKVLSLYFSNE Trigger: TTCGTTGCTGAAATAAAGTGACAAGACTTTGGCTCAACAGTTTGAGGACATTCCTCTCATCCCAGACTGGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR GCA 72 bp | AACCATTGCTCTCTAGACGGTTTGCTAAGTTTAGATTaGACTTCTTCACATCAGGGGCCATGGTTTGGTCAT | + |
Preference number: 3 (lower is better) Translates to: NHCSLDGLLSLD*TSSHQGPWFGH Trigger: ATGACCAAACCATGGCCCCTGATGTGAAGAAGTGCAATCTAAACTTAGCAAACCGTCTAGAGAGCAATGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR CCA 72 bp | GACACTGTTCTCTGGCAGGAGTTTATGAGGAATATTTaGGGGCGATTTGAATGTCTTCTCAGTGTGAACTTC | + |
Preference number: 3 (lower is better) Translates to: DTVLWQEFMRNI*GRFECLLSVNF Trigger: GAAGTTCACACTGAGAAGACATTCAAATCGCCCCCAAATATTCCTCATAAACTCCTGCCAGAGAACAGTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR-3UTR CAA 90 bp | ACTTTCCTGCCCAAAGGGCCAGGAACGTTGAGTGTGCAAGTACTAATTACAATGATTCTGCCCCAAAGTTaGACAAGTCCATTAATTCAG | + |
Preference number: 3 (lower is better) Translates to: TFLPKGPGTLSVQVLITMILPQS*TSPLIQ Trigger: CTGAATTAATGGACTTGTCAAACTTTGGGGCAGAAT...CATTGTAATTAGTACTTGCACACTCAACGTTCCTGGCCCTTTGGGCAGGAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR-3UTR CAA 90 bp | TCGTCTGCTTGTCTGGTAGAGGGAAAAGAGCAGAACCTTCTTTTAAAGCAGTCATCATGGAAGTGCAATTaGGTCTTCTCATGCAAACCA | + |
Preference number: 3 (lower is better) Translates to: SSACLVEGKEQNLLLKQSSWKCN*VFSCKP Trigger: TGGTTTGCATGAGAAGACCAAATTGCACTTCCATGA...TGACTGCTTTAAAAGAAGGTTCTGCTCTTTTCCCTCTACCAGACAAGCAGACGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR TCA 72 bp | CTAGACTATTTAAGGTCTATGAAGTCCTGGCTATCCTaGAACACACCATATAGATCAGGCTGGCCTCTAACT | + |
Preference number: 3 (lower is better) Translates to: LDYLRSMKSWLS*NTPYRSGWPLT Trigger: AGTTAGAGGCCAGCCTGATCTATATGGTGTGTTTCAGGATAGCCAGGACTTCATAGACCTTAAATAGTCTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR GCA 72 bp | TTAAATGATGTAAGGTTTACTGTGTCTGGCAGGATGTaGTTCAGAGACTTGTTCTTAGTACAGCTCTTGGGG | + |
Preference number: 3 (lower is better) Translates to: LNDVRFTVSGRM*FRDLFLVQLLG Trigger: CCCCAAGAGCTGTACTAAGAACAAGTCTCTGAAGCACATCCTGCCAGACACAGTAAACCTTACATCATTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR TCA 72 bp | CACAATGCACACTCTACTGAACAATCACTCCCCAGCTaGAACCACAGAGAAACTTCACTTAAAATCAGTAAC | + |
Preference number: 3 (lower is better) Translates to: HNAHSTEQSLPS*NHRETSLKISN Trigger: GTTACTGATTTTAAGTGAAGTTTCTCTGTGGTTTCAGCTGGGGAGTGATTGTTCAGTAGAGTGTGCATTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR CCA 72 bp | GAGCTAAGTAACACTACAAACAATTTGGTCTTCTCATaGAAGTGCAATTTGGTCTTCTCATGCAAACCAGGC | + |
Preference number: 3 (lower is better) Translates to: ELSNTTNNLVFS*KCNLVFSCKPG Trigger: GCCTGGTTTGCATGAGAAGACCAAATTGCACTTCCATGAGAAGACCAAATTGTTTGTAGTGTTACTTAGCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR-3UTR CAA 90 bp | TCTACTTGGAGGAGTTCATTTCTAAAACAAGTCCTGTTTTGGAGTGCCCAAACACATGGTGTAGTGAGTTaGGCACTTCATTGTAATGAT | + |
Preference number: 3 (lower is better) Translates to: STWRSSFLKQVLFWSAQTHGVVS*ALHCND Trigger: ATCATTACAATGAAGTGCCAAACTCACTACACCATG...TGTTTGGGCACTCCAAAACAGGACTTGTTTTAGAAATGAACTCCTCCAAGTAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR TCA 72 bp | ACATTATTGATGGGGCATGTGAACTTGTTAATGGCTTaGCACTGTTCTCTGGCAGGAGTTTATGAGGAATAT | + |
Preference number: 3 (lower is better) Translates to: TLLMGHVNLLMA*HCSLAGVYEEY Trigger: ATATTCCTCATAAACTCCTGCCAGAGAACAGTGTCAAGCCATTAACAAGTTCACATGCCCCATCAATAATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR TCA 72 bp | ATGTATTTACACAGTGATGGTAAGTCTCCATCAATGTaGCTGCATTTCCAAGCTCTTCAGATAGGCTTGAAT | + |
Preference number: 3 (lower is better) Translates to: MYLHSDGKSPSM*LHFQALQIGLN Trigger: ATTCAAGCCTATCTGAAGAGCTTGGAAATGCAGTCACATTGATGGAGACTTACCATCACTGTGTAAATACAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS-3UTR GCA 90 bp | GGCGAAGGGCGGGACTCTATCCTGACGGGCTGTCTGTCTGTCCCCGGCCACAGGGGTTGCCCCACGCGTTaGGGCGCGACGAGCTGGTCT | + |
Preference number: 4 (lower is better) Translates to: GEGRDSILTGCLSVPGHRGCPTR*GATSWS Trigger: AGACCAGCTCGTCGCGCCGCAACGCGTGGGGCAACC...CCTGTGGCCGGGGACAGACAGACAGCCCGTCAGGATAGAGTCCCGCCCTTCGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS-3UTR CCA 90 bp | GGCGAAGGGCGGGACTCTATCCTGACGGGCTGTCTGTCTGTCCCCGGCCACAGGCCGACGGCGCCGGACTaGAGGTGGTCGAGTTGGACT | + |
Preference number: 4 (lower is better) Translates to: GEGRDSILTGCLSVPGHRPTAPD*RWSSWT Trigger: AGTCCAACTCGACCACCTCCAGTCCGGCGCCGTCGG...CCTGTGGCCGGGGACAGACAGACAGCCCGTCAGGATAGAGTCCCGCCCTTCGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS-3UTR CCA 90 bp | GGCGAAGGGCGGGACTCTATCCTGACGGGCTGTCTGTCTGTCCCCGGCCACAGGGTGGTCGAGTTGGACTaGTTAAACTCCGGCCTGGGC | + |
Preference number: 4 (lower is better) Translates to: GEGRDSILTGCLSVPGHRVVELD*LNSGLG Trigger: GCCCAGGCCGGAGTTTAACCAGTCCAACTCGACCAC...CCTGTGGCCGGGGACAGACAGACAGCCCGTCAGGATAGAGTCCCGCCCTTCGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS-3UTR TCA 90 bp | GGCGAAGGGCGGGACTCTATCCTGACGGGCTGTCTGTCTGTCCCCGGCCACAGGGGCCACTTAGAAAACTaGGACCCAGGGCTGTCTCCA | + |
Preference number: 4 (lower is better) Translates to: GEGRDSILTGCLSVPGHRGHLEN*DPGLSP Trigger: TGGAGACAGCCCTGGGTCTCAGTTTTCTAAGTGGCC...CCTGTGGCCGGGGACAGACAGACAGCCCGTCAGGATAGAGTCCCGCCCTTCGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS-3UTR GCA 90 bp | CCAATGGCACAGTCCTTATCTACAGGAGCACAAAACCTGCGGACGCTGGGCAAACGGCGTACGACAGGTTaGCCCACGCGTTGCGGCGCG | + |
Preference number: 4 (lower is better) Translates to: PMAQSLSTGAQNLRTLGKRRTTG*PTRCGA Trigger: CGCGCCGCAACGCGTGGGGCAACCTGTCGTACGCCG...TTTGCCCAGCGTCCGCAGGTTTTGTGCTCCTGTAGATAAGGACTGTGCCATTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS-3UTR CCA 90 bp | CACAAAACCTGCGGACGCTGGGCAAACATCCTGCACAGGAAAGTGCTGCCGCTGACCCGACTGTTGGGTTaGGCCACTCCGGGATCAACC | + |
Preference number: 4 (lower is better) Translates to: HKTCGRWANILHRKVLPLTRLLG*ATPGST Trigger: GGTTGATCCCGGAGTGGCCCAACCCAACAGTCGGGT...CAGCGGCAGCACTTTCCTGTGCAGGATGTTTGCCCAGCGTCCGCAGGTTTTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS-3UTR TCA 90 bp | CCAATGGCACAGTCCTTATCTACAGGAGCACAAAACCTGCGGACGCTGGGCAAAGAGCCTCTTCTCGGCTaGGCTCTCGATGGCCTTGGT | + |
Preference number: 4 (lower is better) Translates to: PMAQSLSTGAQNLRTLGKEPLLG*ALDGLG Trigger: ACCAAGGCCATCGAGAGCTCAGCCGAGAAGAGGCTC...TTTGCCCAGCGTCCGCAGGTTTTGTGCTCCTGTAGATAAGGACTGTGCCATTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS-3UTR TCA 90 bp | GACAGACAGAGTTCCCATGGGAACTATGACAGCGTGACACAGGGCATCATCTGGAGATCTGCGACAGGGTaGGCCTCTTCTCGGCTGAGC | + |
Preference number: 4 (lower is better) Translates to: DRQSSHGNYDSVTQGIIWRSATG*ASSRLS Trigger: GCTCAGCCGAGAAGAGGCTCACCCTGTCGCAGATCT...CCAGATGATGCCCTGTGTCACGCTGTCATAGTTCCCATGGGAACTCTGTCTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS-3UTR GCA 90 bp | GTCTGTCTGTCCCCGGCCACAGGGCCAGGCTGTTTGGTTTGCATAAAGCACAATCGAAGCCGTTTGCTGTaGATGTCCAGGGTGGGTGTG | + |
Preference number: 4 (lower is better) Translates to: VCLSPATGPGCLVCIKHNRSRLL*MSRVGV Trigger: CACACCCACCCTGGACATGCACAGCAAACGGCTTCG...ATTGTGCTTTATGCAAACCAAACAGCCTGGCCCTGTGGCCGGGGACAGACAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS-3UTR CCA 90 bp | CACAAAACCTGCGGACGCTGGGCAAACATCCTGCACAGGAAAGTGCTGCCGCTGTACTGTTGTTGTCCATaGACGCAGCTCTTCTCCGGG | + |
Preference number: 4 (lower is better) Translates to: HKTCGRWANILHRKVLPLYCCCP*TQLFSG Trigger: CCCGGAGAAGAGCTGCGTCCATGGACAACAACAGTA...CAGCGGCAGCACTTTCCTGTGCAGGATGTTTGCCCAGCGTCCGCAGGTTTTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS-3UTR CCA 90 bp | GACAGACAGAGTTCCCATGGGAACTATGACAGCGTGACACAGGGCATCATCTGGAAGTCATCGTTGCTGTaGGACCCAGGACTCGCAGGC | + |
Preference number: 4 (lower is better) Translates to: DRQSSHGNYDSVTQGIIWKSSLL*DPGLAG Trigger: GCCTGCGAGTCCTGGGTCCCACAGCAACGATGACTT...CCAGATGATGCCCTGTGTCACGCTGTCATAGTTCCCATGGGAACTCTGTCTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS-3UTR CCA 90 bp | CAAACACACTGCCACCCCTCTGCGCTGCAGCCAGAGATCCTCTCTGAACAAAATGGGAGCTTCTCCTGGTaGAGGACACCCATCCTACCA | + |
Preference number: 4 (lower is better) Translates to: QTHCHPSALQPEILSEQNGSFSW*RTPILP Trigger: TGGTAGGATGGGTGTCCTCCACCAGGAGAAGCTCCC...ATTTTGTTCAGAGAGGATCTCTGGCTGCAGCGCAGAGGGGTGGCAGTGTGTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS-3UTR GCA 90 bp | CACAAAACCTGCGGACGCTGGGCAAACATCCTGCACAGGAAAGTGCTGCCGCTGCATTTTGTTATGAGATaGCTGGCTGCCATACGCTGG | + |
Preference number: 4 (lower is better) Translates to: HKTCGRWANILHRKVLPLHFVMR*LAAIRW Trigger: CCAGCGTATGGCAGCCAGGCATCTCATAACAAAATG...CAGCGGCAGCACTTTCCTGTGCAGGATGTTTGCCCAGCGTCCGCAGGTTTTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS-3UTR CCA 90 bp | CCAATGGCACAGTCCTTATCTACAGGAGCACAAAACCTGCGGACGCTGGGCAAAGTCTGCATAGGCATCTaGGGCAAAGGGCTCATGCTG | + |
Preference number: 4 (lower is better) Translates to: PMAQSLSTGAQNLRTLGKVCIGI*GKGLML Trigger: CAGCATGAGCCCTTTGCCCCAGATGCCTATGCAGAC...TTTGCCCAGCGTCCGCAGGTTTTGTGCTCCTGTAGATAAGGACTGTGCCATTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR CAA 72 bp | GCTGTCTGTCTGTCCCCGGCCACAGGGCCAGGCTGTTaGGTTTGCATAAAGCACAATGCACACTCTACTGAA | + |
Preference number: 4 (lower is better) Translates to: AVCLSPATGPGC*VCIKHNAHSTE Trigger: TTCAGTAGAGTGTGCATTGTGCTTTATGCAAACCAAACAGCCTGGCCCTGTGGCCGGGGACAGACAGACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS-3UTR TCA 90 bp | AGATCAGGCTGGCCTCTAACTCTGAGAGACCCACTTATCTCTGACTACCAAGTGAGCTCTTCTCCGGGGTaGTTTTCCGCTCTTGCCTCC | + |
Preference number: 4 (lower is better) Translates to: RSGWPLTLRDPLISDYQVSSSPG*FSALAS Trigger: GGAGGCAAGAGCGGAAAATCACCCCGGAGAAGAGCT...CACTTGGTAGTCAGAGATAAGTGGGTCTCTCAGAGTTAGAGGCCAGCCTGATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS-3UTR GCA 90 bp | GTCTGTCTGTCCCCGGCCACAGGGCCAGGCTGTTTGGTTTGCATAAAGCACAATTCTCCCAGGTCATCCTaGTCTGTCATGATGGGAGAA | + |
Preference number: 4 (lower is better) Translates to: VCLSPATGPGCLVCIKHNSPRSS*SVMMGE Trigger: TTCTCCCATCATGACAGAGCAGGATGACCTGGGAGA...ATTGTGCTTTATGCAAACCAAACAGCCTGGCCCTGTGGCCGGGGACAGACAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS-3UTR CCA 90 bp | GACAGACAGAGTTCCCATGGGAACTATGACAGCGTGACACAGGGCATCATCTGGCTGCCAGGCGAGGACTaGGTGGACACAGTTAAAGAT | + |
Preference number: 4 (lower is better) Translates to: DRQSSHGNYDSVTQGIIWLPGED*VDTVKD Trigger: ATCTTTAACTGTGTCCACCCAGTCCTCGCCTGGCAG...CCAGATGATGCCCTGTGTCACGCTGTCATAGTTCCCATGGGAACTCTGTCTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS-3UTR CCA 90 bp | AGATCAGGCTGGCCTCTAACTCTGAGAGACCCACTTATCTCTGACTACCAAGTGCTGGCTGCCATACGCTaGCATGACCGAATTAGGGCC | + |
Preference number: 4 (lower is better) Translates to: RSGWPLTLRDPLISDYQVLAAIR*HDRIRA Trigger: GGCCCTAATTCGGTCATGCCAGCGTATGGCAGCCAG...CACTTGGTAGTCAGAGATAAGTGGGTCTCTCAGAGTTAGAGGCCAGCCTGATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS-3UTR CCA 90 bp | CCAATGGCACAGTCCTTATCTACAGGAGCACAAAACCTGCGGACGCTGGGCAAAGGGCTCATGCTGGATTaGCCGTATGTGTACTTTGAG | + |
Preference number: 4 (lower is better) Translates to: PMAQSLSTGAQNLRTLGKGLMLD*PYVYFE Trigger: CTCAAAGTACACATACGGCCAATCCAGCATGAGCCC...TTTGCCCAGCGTCCGCAGGTTTTGTGCTCCTGTAGATAAGGACTGTGCCATTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS-3UTR CCA 90 bp | CAAACACACTGCCACCCCTCTGCGCTGCAGCCAGAGATCCTCTCTGAACAAAATGCAAAGGGCTCATGCTaGATTGGCCGTATGTGTACT | + |
Preference number: 4 (lower is better) Translates to: QTHCHPSALQPEILSEQNAKGSC*IGRMCT Trigger: AGTACACATACGGCCAATCCAGCATGAGCCCTTTGC...ATTTTGTTCAGAGAGGATCTCTGGCTGCAGCGCAGAGGGGTGGCAGTGTGTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS-3UTR TCA 90 bp | CAAACACACTGCCACCCCTCTGCGCTGCAGCCAGAGATCCTCTCTGAACAAAATCGAATAAACTTGCTGTaGAGGGACAGATTGTGGCGA | + |
Preference number: 4 (lower is better) Translates to: QTHCHPSALQPEILSEQNRINLL*RDRLWR Trigger: TCGCCACAATCTGTCCCTTCACAGCAAGTTTATTCG...ATTTTGTTCAGAGAGGATCTCTGGCTGCAGCGCAGAGGGGTGGCAGTGTGTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS-3UTR TCA 90 bp | GGGCTCAAGGGATCCTTGGGCTTACAGCTTTTCTTTTGGTGGCTCCCTGTAATGTTCATGGCAGATGTGTaGGGCATGGTGTTCACCACA | + |
Preference number: 4 (lower is better) Translates to: GLKGSLGLQLFFWWLPVMFMADV*GMVFTT Trigger: TGTGGTGAACACCATGCCTCACACATCTGCCATGAA...CATTACAGGGAGCCACCAAAAGAAAAGCTGTAAGCCCAAGGATCCCTTGAGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR CAA 72 bp | CTGCAGCCAGAGATCCTCTCTGAACAAAATGTATACTaGGGATCATTTGGCCTGGGAAAGCCACCCTGTCGG | + |
Preference number: 4 (lower is better) Translates to: LQPEILSEQNVY*GSFGLGKPPCR Trigger: CCGACAGGGTGGCTTTCCCAGGCCAAATGATCCCAAGTATACATTTTGTTCAGAGAGGATCTCTGGCTGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR CAA 72 bp | TCTTTCTTCCCGGAGGCCGAGAATCTACTCCTTCAGTaGGCAGCGTCCAGTACATTATTGATGGGGCATGTG | + |
Preference number: 4 (lower is better) Translates to: SFFPEAENLLLQ*AASSTLLMGHV Trigger: CACATGCCCCATCAATAATGTACTGGACGCTGCCAACTGAAGGAGTAGATTCTCGGCCTCCGGGAAGAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR CAA 72 bp | AGATCCTCTCTGAACAAAATGTATACTTGGGATCATTaGGCCTGGGAAAGCCACCCTGTCGGCCACATCTCC | + |
Preference number: 4 (lower is better) Translates to: RSSLNKMYTWDH*AWESHPVGHIS Trigger: GGAGATGTGGCCGACAGGGTGGCTTTCCCAGGCCAAATGATCCCAAGTATACATTTTGTTCAGAGAGGATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR CAA 72 bp | AGGTTTACTGTGTCTGGCAGGATGTGCTTCAGAGACTaGTTCTTAGTACAGCTCTTGGGGTCAGCCCTCCTA | + |
Preference number: 4 (lower is better) Translates to: RFTVSGRMCFRD*FLVQLLGSALL Trigger: TAGGAGGGCTGACCCCAAGAGCTGTACTAAGAACAAGTCTCTGAAGCACATCCTGCCAGACACAGTAAACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR CAA 72 bp | AAGGGGAGAACAGAAACCACTGGCCAGAGGCTGCAGTaGTCATTACCCTTACATGATGACTTTAGTGCACGC | + |
Preference number: 4 (lower is better) Translates to: KGRTETTGQRLQ*SLPLHDDFSAR Trigger: GCGTGCACTAAAGTCATCATGTAAGGGTAATGACAACTGCAGCCTCTGGCCAGTGGTTTCTGTTCTCCCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR CAA 72 bp | TGGGCTCAAGGGATCCTTGGGCTTACAGCTTTTCTTTaGGTGGCTCCCTGTAATGCCTCGTTTCCCAATTAC | + |
Preference number: 4 (lower is better) Translates to: WAQGILGLTAFL*VAPCNASFPNY Trigger: GTAATTGGGAAACGAGGCATTACAGGGAGCCACCAAAAGAAAAGCTGTAAGCCCAAGGATCCCTTGAGCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS-3UTR TCA 90 bp | CAAACACACTGCCACCCCTCTGCGCTGCAGCCAGAGATCCTCTCTGAACAAAATTTCATCATTTTGTTATaGGATGCCTGGCTGCCATAC | + |
Preference number: 4 (lower is better) Translates to: QTHCHPSALQPEILSEQNFIILL*DAWLPY Trigger: GTATGGCAGCCAGGCATCTCATAACAAAATGATGAA...ATTTTGTTCAGAGAGGATCTCTGGCTGCAGCGCAGAGGGGTGGCAGTGTGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS-3UTR GCA 90 bp | TCGTCTGCTTGTCTGGTAGAGGGAAAAGAGCAGAACCTTCTTTTAAAGCAGTCATCTCCAGGACCCTCTTaGCCAGACTGGAGAGATGCT | + |
Preference number: 4 (lower is better) Translates to: SSACLVEGKEQNLLLKQSSPGPS*PDWRDA Trigger: AGCATCTCTCCAGTCTGGGCAAGAGGGTCCTGGAGA...TGACTGCTTTAAAAGAAGGTTCTGCTCTTTTCCCTCTACCAGACAAGCAGACGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS-3UTR CCA 90 bp | TCGTCTGCTTGTCTGGTAGAGGGAAAAGAGCAGAACCTTCTTTTAAAGCAGTCACTTGGCAGCAGAGGGTaGATACACCAGGGAATGCAC | + |
Preference number: 4 (lower is better) Translates to: SSACLVEGKEQNLLLKQSLGSRG*IHQGMH Trigger: GTGCATTCCCTGGTGTATCCACCCTCTGCTGCCAAG...TGACTGCTTTAAAAGAAGGTTCTGCTCTTTTCCCTCTACCAGACAAGCAGACGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS-3UTR CCA 90 bp | GGCTGGTTTCCAAGTTTACTGCCTTCATTTTTAACTAATCCTGCCACTGTCTGTATGGTGTTCACCACATaGGGCAGGGTACGGCCGTTG | + |
Preference number: 4 (lower is better) Translates to: GWFPSLLPSFLTNPATVCMVFTT*GRVRPL Trigger: CAACGGCCGTACCCTGCCCCATGTGGTGAACACCAT...ACAGACAGTGGCAGGATTAGTTAAAAATGAAGGCAGTAAACTTGGAAACCAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS-3UTR CCA 90 bp | ACTTTCCTGCCCAAAGGGCCAGGAACGTTGAGTGTGCAAGTACTAATTACAATGCAGATGTGTGAGGCATaGTGTTCACCACATGGGGCA | + |
Preference number: 4 (lower is better) Translates to: TFLPKGPGTLSVQVLITMQMCEA*CSPHGA Trigger: TGCCCCATGTGGTGAACACCATGCCTCACACATCTG...CATTGTAATTAGTACTTGCACACTCAACGTTCCTGGCCCTTTGGGCAGGAAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS-3UTR CCA 90 bp | TCGTCTGCTTGTCTGGTAGAGGGAAAAGAGCAGAACCTTCTTTTAAAGCAGTCACTTGGGAGCTTCTCCTaGTGGAGGACACCCATCCTA | + |
Preference number: 4 (lower is better) Translates to: SSACLVEGKEQNLLLKQSLGSFS*WRTPIL Trigger: TAGGATGGGTGTCCTCCACCAGGAGAAGCTCCCAAG...TGACTGCTTTAAAAGAAGGTTCTGCTCTTTTCCCTCTACCAGACAAGCAGACGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS-3UTR TCA 90 bp | TCGTCTGCTTGTCTGGTAGAGGGAAAAGAGCAGAACCTTCTTTTAAAGCAGTCACATCCTGCTCTGTCATaGTGGGAGAAAGTCTCCCAC | + |
Preference number: 4 (lower is better) Translates to: SSACLVEGKEQNLLLKQSHPALS*WEKVSH Trigger: GTGGGAGACTTTCTCCCATCATGACAGAGCAGGATG...TGACTGCTTTAAAAGAAGGTTCTGCTCTTTTCCCTCTACCAGACAAGCAGACGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS-3UTR CCA 90 bp | CAAACACACTGCCACCCCTCTGCGCTGCAGCCAGAGATCCTCTCTGAACAAAATGTTCTCCATGTTTTCTaGATTGCTGATTTCAGACAG | + |
Preference number: 4 (lower is better) Translates to: QTHCHPSALQPEILSEQNVLHVF*IADFRQ Trigger: CTGTCTGAAATCAGCAATCCAGAAAACATGGAGAAC...ATTTTGTTCAGAGAGGATCTCTGGCTGCAGCGCAGAGGGGTGGCAGTGTGTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR CAA 72 bp | AGGATGTGCTTCAGAGACTTGTTCTTAGTACAGCTCTaGGGGTCAGCCCTCCTATGGAACTCAACCATACAA | + |
Preference number: 4 (lower is better) Translates to: RMCFRDLFLVQL*GSALLWNSTIQ Trigger: TTGTATGGTTGAGTTCCATAGGAGGGCTGACCCCAAGAGCTGTACTAAGAACAAGTCTCTGAAGCACATCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS-3UTR GCA 90 bp | AGTCTTTTCACAGAGCAATCATGTACAATAATAGACCAGAAAGCGAACATTCTCGGATACACCAGGGAATaGACGTCCCCATCTCCCAGG | + |
Preference number: 4 (lower is better) Translates to: SLFTEQSCTIIDQKANILGYTRE*TSPSPR Trigger: CCTGGGAGATGGGGACGTGCATTCCCTGGTGTATCC...GAGAATGTTCGCTTTCTGGTCTATTATTGTACATGATTGCTCTGTGAAAAGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS-3UTR CCA 90 bp | ACTTTCCTGCCCAAAGGGCCAGGAACGTTGAGTGTGCAAGTACTAATTACAATGCTCTTTCAAGAGTCCTaGGGCACAGTTATACTGGTT | + |
Preference number: 4 (lower is better) Translates to: TFLPKGPGTLSVQVLITMLFQES*GTVILV Trigger: AACCAGTATAACTGTGCCCCAGGACTCTTGAAAGAG...CATTGTAATTAGTACTTGCACACTCAACGTTCCTGGCCCTTTGGGCAGGAAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR CAA 72 bp | GAACCATTGCTCTCTAGACGGTTTGCTAAGTTTAGATaGCACTTCTTCACATCAGGGGCCATGGTTTGGTCA | + |
Preference number: 4 (lower is better) Translates to: EPLLSRRFAKFR*HFFTSGAMVWS Trigger: TGACCAAACCATGGCCCCTGATGTGAAGAAGTGCAATCTAAACTTAGCAAACCGTCTAGAGAGCAATGGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR CAA 72 bp | TCCTCACACACTGAGAACCATTGCTCTCTAGACGGTTaGCTAAGTTTAGATTGCACTTCTTCACATCAGGGG | + |
Preference number: 4 (lower is better) Translates to: SSHTENHCSLDG*LSLDCTSSHQG Trigger: CCCCTGATGTGAAGAAGTGCAATCTAAACTTAGCAAACCGTCTAGAGAGCAATGGTTCTCAGTGTGTGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR CAA 72 bp | TCTCAAATACCAGGAGTTAAGAAGCCTTTTGCAAAGTaGCTCTTTCTTCCCGGAGGCCGAGAATCTACTCCT | + |
Preference number: 4 (lower is better) Translates to: SQIPGVKKPFAK*LFLPGGRESTP Trigger: AGGAGTAGATTCTCGGCCTCCGGGAAGAAAGAGCAACTTTGCAAAAGGCTTCTTAACTCCTGGTATTTGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR CAA 72 bp | TACATGTCTCTCAAATACCAGGAGTTAAGAAGCCTTTaGCAAAGTTGCTCTTTCTTCCCGGAGGCCGAGAAT | + |
Preference number: 4 (lower is better) Translates to: YMSLKYQELRSL*QSCSFFPEAEN Trigger: ATTCTCGGCCTCCGGGAAGAAAGAGCAACTTTGCAAAAGGCTTCTTAACTCCTGGTATTTGAGAGACATGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS-3UTR TCA 90 bp | TCTACTTGGAGGAGTTCATTTCTAAAACAAGTCCTGTTTTGGAGTGCCCAAACAGGGACGAGAGAAGGTTaGGATTATCCAGAAGGTTCT | + |
Preference number: 4 (lower is better) Translates to: STWRSSFLKQVLFWSAQTGTREG*DYPEGS Trigger: AGAACCTTCTGGATAATCTCAACCTTCTCTCGTCCC...TGTTTGGGCACTCCAAAACAGGACTTGTTTTAGAAATGAACTCCTCCAAGTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS-3UTR CCA 90 bp | TCTACTTGGAGGAGTTCATTTCTAAAACAAGTCCTGTTTTGGAGTGCCCAAACACTGTGTGGGAAGCTTTaGTTGGGCAACACATTATCA | + |
Preference number: 4 (lower is better) Translates to: STWRSSFLKQVLFWSAQTLCGKL*LGNTLS Trigger: TGATAATGTGTTGCCCAACCAAAGCTTCCCACACAG...TGTTTGGGCACTCCAAAACAGGACTTGTTTTAGAAATGAACTCCTCCAAGTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR CAA 72 bp | CTATACATAACTTTCCTGCCCAAAGGGCCAGGAACGTaGAGTGTGCAAGTACTAATTACAATGGTTTACGAT | + |
Preference number: 4 (lower is better) Translates to: LYITFLPKGPGT*SVQVLITMVYD Trigger: ATCGTAAACCATTGTAATTAGTACTTGCACACTCAACGTTCCTGGCCCTTTGGGCAGGAAAGTTATGTATAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS-3UTR CCA 90 bp | AGTCTTTTCACAGAGCAATCATGTACAATAATAGACCAGAAAGCGAACATTCTCTGCAAACGAATAGCATaGTGTCTGCTGCATCATGCT | + |
Preference number: 4 (lower is better) Translates to: SLFTEQSCTIIDQKANILCKRIA*CLLHHA Trigger: AGCATGATGCAGCAGACACCATGCTATTCGTTTGCA...GAGAATGTTCGCTTTCTGGTCTATTATTGTACATGATTGCTCTGTGAAAAGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR CAA 72 bp | ACAAAGCTGGCACTTAATCTTATTCTGCCCCAAAGTTaGACAAGTCCATTAATTCAGCACATTGATCACTGG | + |
Preference number: 4 (lower is better) Translates to: TKLALNLILPQS*TSPLIQHIDHW Trigger: CCAGTGATCAATGTGCTGAATTAATGGACTTGTCAAACTTTGGGGCAGAATAAGATTAAGTGCCAGCTTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR CAA 72 bp | GTGCACGAGCCTCAGGGTTTAGCTTGTCTTTTGATTTaGGGTTATATATATTGGCCTTTGGGTACTACATTT | + |
Preference number: 4 (lower is better) Translates to: VHEPQGLACLLI*GYIYWPLGTTF Trigger: AAATGTAGTACCCAAAGGCCAATATATATAACCCAAAATCAAAAGACAAGCTAAACCCTGAGGCTCGTGCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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3UTR CAA 72 bp | GTTTCACAACTATGTGCACGAGCCTCAGGGTTTAGCTaGTCTTTTGATTTTGGGTTATATATATTGGCCTTT | + |
Preference number: 4 (lower is better) Translates to: VSQLCARASGFS*SFDFGLYILAF Trigger: AAAGGCCAATATATATAACCCAAAATCAAAAGACAAGCTAAACCCTGAGGCTCGTGCACATAGTTGTGAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS CCA 90 bp | GCCGCGCCGCCCGACGGCGCCGGACTGGAGGTGGTCGAGTTGGACTaGTTAAACTCCGGCCTGGGCAGCGGCCAGGTACAGGAGCGCTGC | + |
Preference number: 5 (lower is better) Translates to: AAPPDGAGLEVVELD*LNSGLGSGQVQERC Trigger: GCAGCGCTCCTGTACCTGGCCGCTGCCCAGGCCGGAGTTTAACCAGTCCAACTCGACCACCTCCAGTCCGGCGCCGTCGGGCGGCGCGGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS-3UTR CAA 90 bp | GGCGAAGGGCGGGACTCTATCCTGACGGGCTGTCTGTCTGTCCCCGGCCACAGGGACCCGACTGTTGGGTaGGGCCACTCCGGGATCAAC | + |
Preference number: 5 (lower is better) Translates to: GEGRDSILTGCLSVPGHRDPTVG*GHSGIN Trigger: GTTGATCCCGGAGTGGCCCAACCCAACAGTCGGGTC...CCTGTGGCCGGGGACAGACAGACAGCCCGTCAGGATAGAGTCCCGCCCTTCGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS-3UTR CAA 90 bp | GGCGAAGGGCGGGACTCTATCCTGACGGGCTGTCTGTCTGTCCCCGGCCACAGGGGTGATTTTCCGCTCTaGCCTCCCTCTGGATTGAGC | + |
Preference number: 5 (lower is better) Translates to: GEGRDSILTGCLSVPGHRGDFPL*PPSGLS Trigger: GCTCAATCCAGAGGGAGGCAAGAGCGGAAAATCACC...CCTGTGGCCGGGGACAGACAGACAGCCCGTCAGGATAGAGTCCCGCCCTTCGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS-3UTR CAA 90 bp | GTCTGTCTGTCCCCGGCCACAGGGCCAGGCTGTTTGGTTTGCATAAAGCACAATAGGTTGCCCCACGCGTaGCGGCGCGACGAGCTGGTC | + |
Preference number: 5 (lower is better) Translates to: VCLSPATGPGCLVCIKHNRLPHA*RRDELV Trigger: GACCAGCTCGTCGCGCCGCAACGCGTGGGGCAACCT...ATTGTGCTTTATGCAAACCAAACAGCCTGGCCCTGTGGCCGGGGACAGACAGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS TCA 90 bp | ATGTGTGAGGCATGGTGTTCACCACATGGGGCAGGGTACGGCCGTTaGCCGAAGCCGTTTGCTGTGCATGTCCAGGGTGGGTGTGGGAGC | + |
Preference number: 5 (lower is better) Translates to: MCEAWCSPHGAGYGR*PKPFAVHVQGGCGS Trigger: GCTCCCACACCCACCCTGGACATGCACAGCAAACGGCTTCGGTCAACGGCCGTACCCTGCCCCATGTGGTGAACACCATGCCTCACACAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS GCA 90 bp | AGCGTAGACGCCATCTTGGCAGCAGAGGGTGGATACACCAGGGAATaGACGTCCCCATCTCCCAGGTCATCCTGCTCTGTCATGATGGGA | + |
Preference number: 5 (lower is better) Translates to: SVDAILAAEGGYTRE*TSPSPRSSCSVMMG Trigger: TCCCATCATGACAGAGCAGGATGACCTGGGAGATGGGGACGTGCATTCCCTGGTGTATCCACCCTCTGCTGCCAAGATGGCGTCTACGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS-3UTR CAA 90 bp | GACAGACAGAGTTCCCATGGGAACTATGACAGCGTGACACAGGGCATCATCTGGCTGGAGGTGGTCGAGTaGGACTGGTTAAACTCCGGC | + |
Preference number: 5 (lower is better) Translates to: DRQSSHGNYDSVTQGIIWLEVVE*DWLNSG Trigger: GCCGGAGTTTAACCAGTCCAACTCGACCACCTCCAG...CCAGATGATGCCCTGTGTCACGCTGTCATAGTTCCCATGGGAACTCTGTCTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS-3UTR CAA 90 bp | GGGCTCAAGGGATCCTTGGGCTTACAGCTTTTCTTTTGGTGGCTCCCTGTAATGGTCTCCAGGACCCTCTaGCCCAGACTGGAGAGATGC | + |
Preference number: 5 (lower is better) Translates to: GLKGSLGLQLFFWWLPVMVSRTL*PRLERC Trigger: GCATCTCTCCAGTCTGGGCAAGAGGGTCCTGGAGAC...CATTACAGGGAGCCACCAAAAGAAAAGCTGTAAGCCCAAGGATCCCTTGAGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS-3UTR CAA 90 bp | CACAAAACCTGCGGACGCTGGGCAAACATCCTGCACAGGAAAGTGCTGCCGCTGGGGGACGAGAGAAGGTaGAGATTATCCAGAAGGTTC | + |
Preference number: 5 (lower is better) Translates to: HKTCGRWANILHRKVLPLGDERR*RLSRRF Trigger: GAACCTTCTGGATAATCTCAACCTTCTCTCGTCCCC...CAGCGGCAGCACTTTCCTGTGCAGGATGTTTGCCCAGCGTCCGCAGGTTTTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS-3UTR CAA 90 bp | GGGCTCAAGGGATCCTTGGGCTTACAGCTTTTCTTTTGGTGGCTCCCTGTAATGGTTGACCGAAGCCGTTaGCTGTGCATGTCCAGGGTG | + |
Preference number: 5 (lower is better) Translates to: GLKGSLGLQLFFWWLPVMVDRSR*LCMSRV Trigger: CACCCTGGACATGCACAGCAAACGGCTTCGGTCAAC...CATTACAGGGAGCCACCAAAAGAAAAGCTGTAAGCCCAAGGATCCCTTGAGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS-3UTR CAA 90 bp | GGGCTCAAGGGATCCTTGGGCTTACAGCTTTTCTTTTGGTGGCTCCCTGTAATGGGCCGTATGTGTACTTaGAGTAGTTTGGACTGGGTG | + |
Preference number: 5 (lower is better) Translates to: GLKGSLGLQLFFWWLPVMGRMCT*SSLDWV Trigger: CACCCAGTCCAAACTACTCAAAGTACACATACGGCC...CATTACAGGGAGCCACCAAAAGAAAAGCTGTAAGCCCAAGGATCCCTTGAGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS-3UTR CAA 90 bp | CAAACACACTGCCACCCCTCTGCGCTGCAGCCAGAGATCCTCTCTGAACAAAATACTGTGTGGGAAGCTTaGGTTGGGCAACACATTATC | + |
Preference number: 5 (lower is better) Translates to: QTHCHPSALQPEILSEQNTVWEA*VGQHII Trigger: GATAATGTGTTGCCCAACCAAAGCTTCCCACACAGT...ATTTTGTTCAGAGAGGATCTCTGGCTGCAGCGCAGAGGGGTGGCAGTGTGTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS-3UTR CAA 90 bp | GGGCTCAAGGGATCCTTGGGCTTACAGCTTTTCTTTTGGTGGCTCCCTGTAATGGCAAATTTACTGTTGTaGTCCATGGACGCAGCTCTT | + |
Preference number: 5 (lower is better) Translates to: GLKGSLGLQLFFWWLPVMANLLL*SMDAAL Trigger: AAGAGCTGCGTCCATGGACAACAACAGTAAATTTGC...CATTACAGGGAGCCACCAAAAGAAAAGCTGTAAGCCCAAGGATCCCTTGAGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS CCA 90 bp | GGACGAGAGAAGGTTGAGATTATCCAGAAGGTTCTCCATGTTTTCTaGATTGCTGATTTCAGACAGACTGGGCAGCGTAGACGCCATCTT | + |
Preference number: 5 (lower is better) Translates to: GREKVEIIQKVLHVF*IADFRQTGQRRRHL Trigger: AAGATGGCGTCTACGCTGCCCAGTCTGTCTGAAATCAGCAATCCAGAAAACATGGAGAACCTTCTGGATAATCTCAACCTTCTCTCGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS-3UTR CAA 90 bp | TCGTCTGCTTGTCTGGTAGAGGGAAAAGAGCAGAACCTTCTTTTAAAGCAGTCACTGTGTGTTGTAGTCTaGACACTGTGTGGGAAGCTT | + |
Preference number: 5 (lower is better) Translates to: SSACLVEGKEQNLLLKQSLCVVV*TLCGKL Trigger: AAGCTTCCCACACAGTGTCAAGACTACAACACACAG...TGACTGCTTTAAAAGAAGGTTCTGCTCTTTTCCCTCTACCAGACAAGCAGACGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS-3UTR CAA 90 bp | ACTTTCCTGCCCAAAGGGCCAGGAACGTTGAGTGTGCAAGTACTAATTACAATGTCCATGTTTTCTGGATaGCTGATTTCAGACAGACTG | + |
Preference number: 5 (lower is better) Translates to: TFLPKGPGTLSVQVLITMSMFSG*LISDRL Trigger: CAGTCTGTCTGAAATCAGCAATCCAGAAAACATGGA...CATTGTAATTAGTACTTGCACACTCAACGTTCCTGGCCCTTTGGGCAGGAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS-3UTR CAA 90 bp | TCTACTTGGAGGAGTTCATTTCTAAAACAAGTCCTGTTTTGGAGTGCCCAAACATTAGCAAATTTACTGTaGTTGTCCATGGACGCAGCT | + |
Preference number: 5 (lower is better) Translates to: STWRSSFLKQVLFWSAQTLANLL*LSMDAA Trigger: AGCTGCGTCCATGGACAACAACAGTAAATTTGCTAA...TGTTTGGGCACTCCAAAACAGGACTTGTTTTAGAAATGAACTCCTCCAAGTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS GCA 72 bp | GGTTGCCCCACGCGTTGCGGCGCGACGAGCTGGTCTTaGGCGGCTGTCCCGCGAGTGGCCCCGCGGCGGCGG | + |
Preference number: 6 (lower is better) Translates to: GCPTRCGATSWS*AAVPRVAPRRR Trigger: CCGCCGCCGCGGGGCCACTCGCGGGACAGCCGCGCAAGACCAGCTCGTCGCGCCGCAACGCGTGGGGCAACC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS CAA 72 bp | AGGTTGCCCCACGCGTTGCGGCGCGACGAGCTGGTCTaGCGCGGCTGTCCCGCGAGTGGCCCCGCGGCGGCG | + |
Preference number: 6 (lower is better) Translates to: RLPHALRRDELV*RGCPASGPAAA Trigger: CGCCGCCGCGGGGCCACTCGCGGGACAGCCGCGCAAGACCAGCTCGTCGCGCCGCAACGCGTGGGGCAACCT 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS CCA 72 bp | ACGACAGGTTGCCCCACGCGTTGCGGCGCGACGAGCTaGTCTTGCGCGGCTGTCCCGCGAGTGGCCCCGCGG | + |
Preference number: 6 (lower is better) Translates to: TTGCPTRCGATS*SCAAVPRVAPR Trigger: CCGCGGGGCCACTCGCGGGACAGCCGCGCAAGACCAGCTCGTCGCGCCGCAACGCGTGGGGCAACCTGTCGT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS GCA 72 bp | AACTCCGGCCTGGGCAGCGGCCAGGTACAGGAGCGCTaGCGGGGCAGCGGCTCGAAGTCCGGGTCGGTCTCC | + |
Preference number: 6 (lower is better) Translates to: NSGLGSGQVQER*RGSGSKSGSVS Trigger: GGAGACCGACCCGGACTTCGAGCCGCTGCCCCGGCAGCGCTCCTGTACCTGGCCGCTGCCCAGGCCGGAGTT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS CAA 72 bp | GCGCCGCCCGACGGCGCCGGACTGGAGGTGGTCGAGTaGGACTGGTTAAACTCCGGCCTGGGCAGCGGCCAG | + |
Preference number: 6 (lower is better) Translates to: APPDGAGLEVVE*DWLNSGLGSGQ Trigger: CTGGCCGCTGCCCAGGCCGGAGTTTAACCAGTCCAACTCGACCACCTCCAGTCCGGCGCCGTCGGGCGGCGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS CAA 90 bp | TTGGCGGCCGCGCCGCCCGACGGCGCCGGACTGGAGGTGGTCGAGTaGGACTGGTTAAACTCCGGCCTGGGCAGCGGCCAGGTACAGGAG | + |
Preference number: 6 (lower is better) Translates to: LAAAPPDGAGLEVVE*DWLNSGLGSGQVQE Trigger: CTCCTGTACCTGGCCGCTGCCCAGGCCGGAGTTTAACCAGTCCAACTCGACCACCTCCAGTCCGGCGCCGTCGGGCGGCGCGGCCGCCAA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS CCA 72 bp | CCCGACGGCGCCGGACTGGAGGTGGTCGAGTTGGACTaGTTAAACTCCGGCCTGGGCAGCGGCCAGGTACAG | + |
Preference number: 6 (lower is better) Translates to: PDGAGLEVVELD*LNSGLGSGQVQ Trigger: CTGTACCTGGCCGCTGCCCAGGCCGGAGTTTAACCAGTCCAACTCGACCACCTCCAGTCCGGCGCCGTCGGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS CAA 72 bp | GGCATGGTGTTCACCACATGGGGCAGGGTACGGCCGTaGACCGAAGCCGTTTGCTGTGCATGTCCAGGGTGG | + |
Preference number: 6 (lower is better) Translates to: GMVFTTWGRVRP*TEAVCCACPGW Trigger: CCACCCTGGACATGCACAGCAAACGGCTTCGGTCAACGGCCGTACCCTGCCCCATGTGGTGAACACCATGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS TCA 72 bp | GTCTTCACGGGGGTCAAGCGGTTCATGGCAGATGTGTaGGGCATGGTGTTCACCACATGGGGCAGGGTACGG | + |
Preference number: 6 (lower is better) Translates to: VFTGVKRFMADV*GMVFTTWGRVR Trigger: CCGTACCCTGCCCCATGTGGTGAACACCATGCCTCACACATCTGCCATGAACCGCTTGACCCCCGTGAAGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS CAA 72 bp | GGGCCCATCATTACATTTTGGCCCAGGACCCGACTGTaGGGTTGGGCCACTCCGGGATCAACCGGTGACATA | + |
Preference number: 6 (lower is better) Translates to: GPIITFWPRTRL*GWATPGSTGDI Trigger: TATGTCACCGGTTGATCCCGGAGTGGCCCAACCCAACAGTCGGGTCCTGGGCCAAAATGTAATGATGGGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS CAA 72 bp | GCAGCCCGCCCTCGGCTCTTAGCAAATTTACTGTTGTaGTCCATGGACGCAGCTCTTCTCCGGGGTGATTTT | + |
Preference number: 6 (lower is better) Translates to: AARPRLLANLLL*SMDAALLRGDF Trigger: AAAATCACCCCGGAGAAGAGCTGCGTCCATGGACAACAACAGTAAATTTGCTAAGAGCCGAGGGCGGGCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS CAA 72 bp | TTAGCAGCCCGCCCTCGGCTCTTAGCAAATTTACTGTaGTTGTCCATGGACGCAGCTCTTCTCCGGGGTGAT | + |
Preference number: 6 (lower is better) Translates to: LAARPRLLANLL*LSMDAALLRGD Trigger: ATCACCCCGGAGAAGAGCTGCGTCCATGGACAACAACAGTAAATTTGCTAAGAGCCGAGGGCGGGCTGCTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS CCA 72 bp | ATCATTACATTTTGGCCCAGGACCCGACTGTTGGGTTaGGCCACTCCGGGATCAACCGGTGACATAATGTCA | + |
Preference number: 6 (lower is better) Translates to: IITFWPRTRLLG*ATPGSTGDIMS Trigger: TGACATTATGTCACCGGTTGATCCCGGAGTGGCCCAACCCAACAGTCGGGTCCTGGGCCAAAATGTAATGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS CAA 72 bp | CGAGGACGAAATGTACTCCAGTTATCAAAGTCATCGTaGCTGTGGGACCCAGGACTCGCAGGCCACTTAGAA | + |
Preference number: 6 (lower is better) Translates to: RGRNVLQLSKSS*LWDPGLAGHLE Trigger: TTCTAAGTGGCCTGCGAGTCCTGGGTCCCACAGCAACGATGACTTTGATAACTGGAGTACATTTCGTCCTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS CAA 90 bp | GAGAGAAGGTTGAGATTATCCAGAAGGTTCTCCATGTTTTCTGGATaGCTGATTTCAGACAGACTGGGCAGCGTAGACGCCATCTTGGCA | + |
Preference number: 6 (lower is better) Translates to: ERRLRLSRRFSMFSG*LISDRLGSVDAILA Trigger: TGCCAAGATGGCGTCTACGCTGCCCAGTCTGTCTGAAATCAGCAATCCAGAAAACATGGAGAACCTTCTGGATAATCTCAACCTTCTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS CCA 72 bp | AAGGTTGAGATTATCCAGAAGGTTCTCCATGTTTTCTaGATTGCTGATTTCAGACAGACTGGGCAGCGTAGA | + |
Preference number: 6 (lower is better) Translates to: KVEIIQKVLHVF*IADFRQTGQRR Trigger: TCTACGCTGCCCAGTCTGTCTGAAATCAGCAATCCAGAAAACATGGAGAACCTTCTGGATAATCTCAACCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |
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CDS CCA 72 bp | TGTACTTTGAGTAGTTTGGACTGGGTGAATTTAGACTaGTGTTTGGCGGTGCAAACGAATAGCATGGTGTCT | + |
Preference number: 6 (lower is better) Translates to: CTLSSLDWVNLD*CLAVQTNSMVS Trigger: AGACACCATGCTATTCGTTTGCACCGCCAAACACCAGTCTAAATTCACCCAGTCCAAACTACTCAAAGTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053764.7 |