Pregenerated sensors for FOXN4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042002Ensembl transcript IDs: ENSMUST00000044790.12, ENSMUST00000129530.8, ENSMUST00000144050.2
Found 197 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCCAGGAACCCTACCCATGGCTGGCTGCGGGAGAGGCCCTGGGCTaGGACTGGGTAGGGCATGAAGAGGTGGGGTCTGTGCTGGTGCCG | + |
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Preference number: 1 (lower is better) Translates to: PQEPYPWLAAGEALG*DWVGHEEVGSVLVP Trigger: CGGCACCAGCACAGACCCCACCTCTTCATGCCCTACCCAGTCTCAGCCCAGGGCCTCTCCCGCAGCCAGCCATGGGTAGGGTTCCTGGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
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| 3UTR CCA 90 bp | CTGCATGACTTTCTGAGGGCCCGGCACACAGCTGCTGAGCAAGGCTaGCCGGCTGGGCTGGGCTGCACTGTCTCAGTGGGGAGACCTGAA | + |
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Preference number: 1 (lower is better) Translates to: LHDFLRARHTAAEQG*PAGLGCTVSVGRPE Trigger: TTCAGGTCTCCCCACTGAGACAGTGCAGCCCAGCCCAGCCGGCCAGCCTTGCTCAGCAGCTGTGTGCCGGGCCCTCAGAAAGTCATGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| 3UTR CCA 90 bp | ATCAGGGAAGGACTGGTCACTGTTGCCAGAGACAGGGGTCAGGCTTaGGGCTCCCAGGTCGCAGCCAAGCGGGGAGTCTCCAAAGGCCTC | + |
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Preference number: 1 (lower is better) Translates to: IREGLVTVARDRGQA*GSQVAAKRGVSKGL Trigger: GAGGCCTTTGGAGACTCCCCGCTTGGCTGCGACCTGGGAGCCCCAAGCCTGACCCCTGTCTCTGGCAACAGTGACCAGTCCTTCCCTGAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
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| 3UTR CCA 90 bp | CCGGCTGGGCTGGGCTGCACTGTCTCAGTGGGGAGACCTGAAAGATaGCCCCTGATGACAAGACCTCACGCTGCCCTTACAGATGGCTGG | + |
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Preference number: 1 (lower is better) Translates to: PAGLGCTVSVGRPER*PLMTRPHAALTDGW Trigger: CCAGCCATCTGTAAGGGCAGCGTGAGGTCTTGTCATCAGGGGCCATCTTTCAGGTCTCCCCACTGAGACAGTGCAGCCCAGCCCAGCCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| 3UTR CCA 90 bp | GGGGTGCAGGAGGAACCACAAGCTGTCATTTCCCCCGTCAGCAATTaGCTCGAGACACGGTACAGCCAAGGTGCCCTTTCTTCCAGGCCG | + |
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Preference number: 1 (lower is better) Translates to: GVQEEPQAVISPVSN*LETRYSQGALSSRP Trigger: CGGCCTGGAAGAAAGGGCACCTTGGCTGTACCGTGTCTCGAGCCAATTGCTGACGGGGGAAATGACAGCTTGTGGTTCCTCCTGCACCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| 3UTR TCA 90 bp | GCAGCGGGCACCGACAGGGCGCTACACTGGTGCTACAAAGAGTGGTaGGCGCTCGAGCCCAAGGTTCCCATCTTCCTGTTTCATGTCTCT | + |
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Preference number: 1 (lower is better) Translates to: AAGTDRALHWCYKEW*ALEPKVPIFLFHVS Trigger: AGAGACATGAAACAGGAAGATGGGAACCTTGGGCTCGAGCGCTCACCACTCTTTGTAGCACCAGTGTAGCGCCCTGTCGGTGCCCGCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| 3UTR GCA 90 bp | GCCATGCTGCGGTGTATGGCAGCGAGGTCCTTTCGTTTCCACTTGTaGATCTCCTCCTCCATCTTGTCGATGCGAGCCAGGTTCAGGGCC | + |
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Preference number: 1 (lower is better) Translates to: AMLRCMAARSFRFHL*ISSSILSMRARFRA Trigger: GGCCCTGAACCTGGCTCGCATCGACAAGATGGAGGAGGAGATGCACAAGTGGAAACGAAAGGACCTCGCTGCCATACACCGCAGCATGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
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| 3UTR CCA 90 bp | AGTTTCCCCTCCTGTGTCTCCAGGACACACTACTGTGTCCCAAGGTaGGCTCTGCCAGGAGTCAGGCTATTAAGAGCCGGGTCTCACCAT | + |
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Preference number: 1 (lower is better) Translates to: SFPSCVSRTHYCVPR*ALPGVRLLRAGSHH Trigger: ATGGTGAGACCCGGCTCTTAATAGCCTGACTCCTGGCAGAGCCCACCTTGGGACACAGTAGTGTGTCCTGGAGACACAGGAGGGGAAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| 3UTR TCA 90 bp | CCTCCTTCATCTCTTCCCACAGGTTACCCTGTAGAGCGAAGTCCATaGTGCTGGGGTCCAGGGCGTCCACCTCTGTGTTCATGTCACTGT | + |
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Preference number: 1 (lower is better) Translates to: PPSSLPTGYPVERSP*CWGPGRPPLCSCHC Trigger: ACAGTGACATGAACACAGAGGTGGACGCCCTGGACCCCAGCATCATGGACTTCGCTCTACAGGGTAACCTGTGGGAAGAGATGAAGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
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| 3UTR CCA 90 bp | CGCTCGAGCCCAAGGTTCCCATCTTCCTGTTTCATGTCTCTAACCTaGCACAGACAGGTCTCTACTTTTTCCTCTTGTCTTAGCACCACA | + |
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Preference number: 1 (lower is better) Translates to: RSSPRFPSSCFMSLT*HRQVSTFSSCLSTT Trigger: TGTGGTGCTAAGACAAGAGGAAAAAGTAGAGACCTGTCTGTGCCAGGTTAGAGACATGAAACAGGAAGATGGGAACCTTGGGCTCGAGCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| 3UTR-3UTR TCA 90 bp | GACTGGGTAGGGCATGAAGAGGTGGGGTCTGTGCTGGTGCCGGGGAGTCTGGGGCAGGCAGCCCTTGCGTaGGGAGCCGCTGGACTTGGT | + |
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Preference number: 2 (lower is better) Translates to: DWVGHEEVGSVLVPGSLGQAALA*GAAGLG Trigger: ACCAAGTCCAGCGGCTCCTCACGCAAGGGCTGCCTG...CCCCAGACTCCCCGGCACCAGCACAGACCCCACCTCTTCATGCCCTACCCAGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
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| 3UTR-3UTR TCA 90 bp | TCCCCAGGAACCCTACCCATGGCTGGCTGCGGGAGAGGCCCTGGGCTGAGACTGGCCACCGTGGTGGCATaGGTTAGCATGGGGGCTTTA | + |
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Preference number: 2 (lower is better) Translates to: SPGTLPMAGCGRGPGLRLATVVA*VSMGAL Trigger: TAAAGCCCCCATGCTAACTCATGCCACCACGGTGGC...CAGTCTCAGCCCAGGGCCTCTCCCGCAGCCAGCCATGGGTAGGGTTCCTGGGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
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| 3UTR-3UTR GCA 90 bp | TCAGGGAAGGACTGGTCACTGTTGCCAGAGACAGGGGTCAGGCTTGGGGCTCCCCCCACAGGCAGCCCTTaGGTGAGGAGCCGCTGGACT | + |
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Preference number: 2 (lower is better) Translates to: SGKDWSLLPETGVRLGAPPTGSP*VRSRWT Trigger: AGTCCAGCGGCTCCTCACGCAAGGGCTGCCTGTGGG...GGGAGCCCCAAGCCTGACCCCTGTCTCTGGCAACAGTGACCAGTCCTTCCCTGA 64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
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| 3UTR-3UTR GCA 90 bp | AGGACTGGTCACTGTTGCCAGAGACAGGGGTCAGGCTTGGGGCTCCCAGGTCGCGGCTGGAGCTGGTGGTaGAGAGGCACTGACTGCAGG | + |
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Preference number: 2 (lower is better) Translates to: RTGHCCQRQGSGLGLPGRGWSWW*RGTDCR Trigger: CCTGCAGTCAGTGCCTCTGCACCACCAGCTCCAGCC...GCGACCTGGGAGCCCCAAGCCTGACCCCTGTCTCTGGCAACAGTGACCAGTCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
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| 3UTR-3UTR TCA 90 bp | GTGAGGACAGACATAGCCAAGAAGAGGCAGCGGGCACCGACAGGGCGCTACACTTGCTCGCTCGCTCTCTaGATCACAGGGGTGGGGGCG | + |
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Preference number: 2 (lower is better) Translates to: VRTDIAKKRQRAPTGRYTCSLAL*ITGVGA Trigger: CGCCCCCACCCCTGTGATTCAGAGAGCGAGCGAGCA...AGTGTAGCGCCCTGTCGGTGCCCGCTGCCTCTTCTTGGCTATGTCTGTCCTCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| 3UTR-3UTR TCA 90 bp | TCAGGGAAGGACTGGTCACTGTTGCCAGAGACAGGGGTCAGGCTTGGGGCTCCCGGAGAGGCCCTGGGCTaGGACTGGGTAGGGCATGAA | + |
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Preference number: 2 (lower is better) Translates to: SGKDWSLLPETGVRLGAPGEALG*DWVGHE Trigger: TTCATGCCCTACCCAGTCTCAGCCCAGGGCCTCTCC...GGGAGCCCCAAGCCTGACCCCTGTCTCTGGCAACAGTGACCAGTCCTTCCCTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
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| 3UTR-3UTR TCA 90 bp | AGGACTGGTCACTGTTGCCAGAGACAGGGGTCAGGCTTGGGGCTCCCAGGTCGCGCTTTCCGGGCGGTCTaGGATGAGCTTGTCCAACTC | + |
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Preference number: 2 (lower is better) Translates to: RTGHCCQRQGSGLGLPGRAFRAV*DELVQL Trigger: GAGTTGGACAAGCTCATCTCAGACCGCCCGGAAAGC...GCGACCTGGGAGCCCCAAGCCTGACCCCTGTCTCTGGCAACAGTGACCAGTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
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| 3UTR-3UTR CCA 90 bp | ACATCAGGGAAGGACTGGTCACTGTTGCCAGAGACAGGGGTCAGGCTTGGGGCTGGCAGCTGTGGGCCATaGCCACCGTGGTGGCATGAG | + |
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Preference number: 2 (lower is better) Translates to: TSGKDWSLLPETGVRLGAGSCGP*PPWWHE Trigger: CTCATGCCACCACGGTGGCCATGGCCCACAGCTGCC...AGCCCCAAGCCTGACCCCTGTCTCTGGCAACAGTGACCAGTCCTTCCCTGATGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
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| 3UTR-3UTR TCA 90 bp | TCCCACAGGTTACCCTGTAGAGCGAAGTCCATGATGCTGGGGTCCAGGGCGTCCCCGGGCGGTCTGAGATaGGCTTGTCCAACTCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: SHRLPCRAKSMMLGSRASPGGLR*ACPTPQ Trigger: CTGAGGAGTTGGACAAGCTCATCTCAGACCGCCCGG...GGACGCCCTGGACCCCAGCATCATGGACTTCGCTCTACAGGGTAACCTGTGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
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| 3UTR-3UTR TCA 90 bp | AGGACTGGTCACTGTTGCCAGAGACAGGGGTCAGGCTTGGGGCTCCCAGGTCGCCCAGCGTGTCTAGGCTaGAGCTGTCCTCCTTCATCT | + |
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Preference number: 2 (lower is better) Translates to: RTGHCCQRQGSGLGLPGRPACLG*SCPPSS Trigger: AGATGAAGGAGGACAGCTTCAGCCTAGACACGCTGG...GCGACCTGGGAGCCCCAAGCCTGACCCCTGTCTCTGGCAACAGTGACCAGTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
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| 3UTR-3UTR CCA 90 bp | GGACGCCGGCAGCTTTCCGGGCGGTCTGAGATGAGCTTGTCCAACTCCTCAGGGTGCGTGAGGAGCCGCTaGACTTGGTTTCCACCTTCT | + |
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Preference number: 2 (lower is better) Translates to: GRRQLSGRSEMSLSNSSGCVRSR*TWFPPS Trigger: AGAAGGTGGAAACCAAGTCCAGCGGCTCCTCACGCA...CCCTGAGGAGTTGGACAAGCTCATCTCAGACCGCCCGGAAAGCTGCCGGCGTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
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| 3UTR-3UTR CCA 90 bp | AGGACTGGTCACTGTTGCCAGAGACAGGGGTCAGGCTTGGGGCTCCCAGGTCGCGGTCATCAGTGGCTTTaGTGGGAGTTGGGAGATGGC | + |
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Preference number: 2 (lower is better) Translates to: RTGHCCQRQGSGLGLPGRGHQWL*WELGDG Trigger: GCCATCTCCCAACTCCCACCAAAGCCACTGATGACC...GCGACCTGGGAGCCCCAAGCCTGACCCCTGTCTCTGGCAACAGTGACCAGTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
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| 3UTR-3UTR CCA 90 bp | ACATCAGGGAAGGACTGGTCACTGTTGCCAGAGACAGGGGTCAGGCTTGGGGCTTGGGGCTGGAGCTGGTaGTGCAGAGGCACTGACTGC | + |
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Preference number: 2 (lower is better) Translates to: TSGKDWSLLPETGVRLGAWGWSW*CRGTDC Trigger: GCAGTCAGTGCCTCTGCACCACCAGCTCCAGCCCCA...AGCCCCAAGCCTGACCCCTGTCTCTGGCAACAGTGACCAGTCCTTCCCTGATGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
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| 3UTR CAA 90 bp | CTGGGGTCCAGGGCGTCCACCTCTGTGTTCATGTCACTGTTGATGTaGAGGAAGTCCCCAGGAACCCTACCCATGGCTGGCTGCGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: LGSRASTSVFMSLLM*RKSPGTLPMAGCGR Trigger: TCTCCCGCAGCCAGCCATGGGTAGGGTTCCTGGGGACTTCCTCAACATCAACAGTGACATGAACACAGAGGTGGACGCCCTGGACCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
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| 3UTR-3UTR TCA 90 bp | CCCTTACAGATGGCTGGCCTGCCTGCTGGGTCTTCTGAACAACCTGGGGTTGTGCCGCCTTGCTTCTGTTaGGTGCCCCAGGAGTGTCCT | + |
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Preference number: 2 (lower is better) Translates to: PLQMAGLPAGSSEQPGVVPPCFC*VPQECP Trigger: AGGACACTCCTGGGGCACTCAACAGAAGCAAGGCGG...CACAACCCCAGGTTGTTCAGAAGACCCAGCAGGCAGGCCAGCCATCTGTAAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| 3UTR-3UTR CCA 90 bp | GTGAGGACAGACATAGCCAAGAAGAGGCAGCGGGCACCGACAGGGCGCTACACTAGCCGGGTCTCACCATaGCCATGCCTCTGTCTCAAG | + |
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Preference number: 2 (lower is better) Translates to: VRTDIAKKRQRAPTGRYTSRVSP*PCLCLK Trigger: CTTGAGACAGAGGCATGGCCATGGTGAGACCCGGCT...AGTGTAGCGCCCTGTCGGTGCCCGCTGCCTCTTCTTGGCTATGTCTGTCCTCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| 3UTR-3UTR CCA 90 bp | TCAGGGAAGGACTGGTCACTGTTGCCAGAGACAGGGGTCAGGCTTGGGGCTCCCAGGAGCCGCTGGACTTaGTTTCCACCTTCTCGAAGC | + |
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Preference number: 2 (lower is better) Translates to: SGKDWSLLPETGVRLGAPRSRWT*FPPSRS Trigger: GCTTCGAGAAGGTGGAAACCAAGTCCAGCGGCTCCT...GGGAGCCCCAAGCCTGACCCCTGTCTCTGGCAACAGTGACCAGTCCTTCCCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
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| 3UTR CAA 90 bp | TGGGGTGCAGGAGGAACCACAAGCTGTCATTTCCCCCGTCAGCAATaGGCTCGAGACACGGTACAGCCAAGGTGCCCTTTCTTCCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: WGAGGTTSCHFPRQQ*ARDTVQPRCPFFQA Trigger: GGCCTGGAAGAAAGGGCACCTTGGCTGTACCGTGTCTCGAGCCAATTGCTGACGGGGGAAATGACAGCTTGTGGTTCCTCCTGCACCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| 3UTR-3UTR CCA 90 bp | CTGATGACAAGACCTCACGCTGCCCTTACAGATGGCTGGCCTGCCTGCTGGGTCAAGTCCTGCAGAAGATaGGGAGGTAGAGGGCTTGCC | + |
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Preference number: 2 (lower is better) Translates to: LMTRPHAALTDGWPACWVKSCRR*GGRGLA Trigger: GGCAAGCCCTCTACCTCCCCATCTTCTGCAGGACTT...GACCCAGCAGGCAGGCCAGCCATCTGTAAGGGCAGCGTGAGGTCTTGTCATCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| 3UTR-3UTR CCA 90 bp | ACATCAGGGAAGGACTGGTCACTGTTGCCAGAGACAGGGGTCAGGCTTGGGGCTCCAACTCCTCAGGGTTaGCCATGCTGCGGTGTATGG | + |
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Preference number: 2 (lower is better) Translates to: TSGKDWSLLPETGVRLGAPTPQG*PCCGVW Trigger: CCATACACCGCAGCATGGCCAACCCTGAGGAGTTGG...AGCCCCAAGCCTGACCCCTGTCTCTGGCAACAGTGACCAGTCCTTCCCTGATGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
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| 3UTR CAA 90 bp | ATGATGCTGGGGTCCAGGGCGTCCACCTCTGTGTTCATGTCACTGTaGATGTTGAGGAAGTCCCCAGGAACCCTACCCATGGCTGGCTGC | + |
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Preference number: 2 (lower is better) Translates to: MMLGSRASTSVFMSL*MLRKSPGTLPMAGC Trigger: GCAGCCAGCCATGGGTAGGGTTCCTGGGGACTTCCTCAACATCAACAGTGACATGAACACAGAGGTGGACGCCCTGGACCCCAGCATCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
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| 3UTR-3UTR TCA 90 bp | AAGAGTGGTGAGCGCTCGAGCCCAAGGTTCCCATCTTCCTGTTTCATGTCTCTAGGGGCGGGGGCTGCCTaGGCATGCTGGAGATGTGAT | + |
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Preference number: 2 (lower is better) Translates to: KSGERSSPRFPSSCFMSLGAGAA*ACWRCD Trigger: ATCACATCTCCAGCATGCTCAGGCAGCCCCCGCCCC...TAGAGACATGAAACAGGAAGATGGGAACCTTGGGCTCGAGCGCTCACCACTCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| 3UTR-3UTR GCA 90 bp | AAGAGCCGGGTCTCACCATGGCCATGCCTCTGTCTCAAGTCCTGCAGAAGATGGGGCAGCATGTTGGGGTaGAGGAGGAACCACAAGCTG | + |
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Preference number: 2 (lower is better) Translates to: KSRVSPWPCLCLKSCRRWGSMLG*RRNHKL Trigger: CAGCTTGTGGTTCCTCCTGCACCCCAACATGCTGCC...CCATCTTCTGCAGGACTTGAGACAGAGGCATGGCCATGGTGAGACCCGGCTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| 3UTR-3UTR GCA 90 bp | GTTGTGAACTCTCAGGCATGGGGTCAGACATCAAGATGGAAAAGAGCAGGTGGAGGTGGGGGCGGGGGCTaGCTGAGCATGCTGGAGATG | + |
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Preference number: 2 (lower is better) Translates to: VVNSQAWGQTSRWKRAGGGGGGG*LSMLEM Trigger: CATCTCCAGCATGCTCAGGCAGCCCCCGCCCCCACC...TCCACCTGCTCTTTTCCATCTTGATGTCTGACCCCATGCCTGAGAGTTCACAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| 3UTR-3UTR GCA 90 bp | GGGGTCCAGGGCGTCCACCTCTGTGTTCATGTCACTGTTGATGTTGAGGAAGTCCCTCAGGGTTGGCCATaGTGCGGTGTATGGCAGCGA | + |
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Preference number: 2 (lower is better) Translates to: GVQGVHLCVHVTVDVEEVPQGWP*CGVWQR Trigger: TCGCTGCCATACACCGCAGCATGGCCAACCCTGAGG...GACTTCCTCAACATCAACAGTGACATGAACACAGAGGTGGACGCCCTGGACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGGCCTTTCTCCAGCTGTAGGCCATGCTCTGAGGCATAGTCAGAGGTTCCTCCCTGTGGCAGCATGTTaGGGTGCAGGAGGAACCACA | + |
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Preference number: 2 (lower is better) Translates to: QGLSPAVGHALRHSQRFLPVAAC*GAGGTT Trigger: TGTGGTTCCTCCTGCACCCCAACATGCTGCCACAGG...GAGGAACCTCTGACTATGCCTCAGAGCATGGCCTACAGCTGGAGAAAGGCCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| 3UTR-3UTR TCA 90 bp | CTGGGGTCCAGGGCGTCCACCTCTGTGTTCATGTCACTGTTGATGTTGAGGAAGAGACTGGGTAGGGCATaGAGAGGTGGGGTCTGTGCT | + |
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Preference number: 2 (lower is better) Translates to: LGSRASTSVFMSLLMLRKRLGRA*RGGVCA Trigger: AGCACAGACCCCACCTCTTCATGCCCTACCCAGTCT...CTTCCTCAACATCAACAGTGACATGAACACAGAGGTGGACGCCCTGGACCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
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| 3UTR-3UTR GCA 90 bp | AGGGCGTCCACCTCTGTGTTCATGTCACTGTTGATGTTGAGGAAGTCCCCAGGACCTCCATCTTGTCGATaGGAGCCAGGTTCAGGGCCC | + |
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Preference number: 2 (lower is better) Translates to: RASTSVFMSLLMLRKSPGPPSCR*EPGSGP Trigger: GGGCCCTGAACCTGGCTCGCATCGACAAGATGGAGG...TCCTGGGGACTTCCTCAACATCAACAGTGACATGAACACAGAGGTGGACGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
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| 3UTR-3UTR CCA 90 bp | GGGGTCCAGGGCGTCCACCTCTGTGTTCATGTCACTGTTGATGTTGAGGAAGTCGGACAGGGTCATCAGTaGCTTTGGTGGGAGTTGGGA | + |
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Preference number: 2 (lower is better) Translates to: GVQGVHLCVHVTVDVEEVGQGHQ*LWWELG Trigger: TCCCAACTCCCACCAAAGCCACTGATGACCCTGTCC...GACTTCCTCAACATCAACAGTGACATGAACACAGAGGTGGACGCCCTGGACCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
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| 3UTR-3UTR GCA 90 bp | GGTTCCTCTCCTAGGAGAATGTGTGTGCTCAGAGTTTCCCCTCCTGTGTCTCCACTTGCTTCTGTTGAGTaGCCCAGGAGTGTCCTGTGG | + |
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Preference number: 2 (lower is better) Translates to: GSSPRRMCVLRVSPPVSPLASVE*PRSVLW Trigger: CCACAGGACACTCCTGGGGCACTCAACAGAAGCAAG...TGGAGACACAGGAGGGGAAACTCTGAGCACACACATTCTCCTAGGAGAGGAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| 3UTR-3UTR GCA 90 bp | ATAGAGACCTGTCACCTGCACATCAGGGAAGGACTGGTCACTGTTGCCAGAGACTGCAGAGGCACTGACTaGAGGGACAGGGTCATCAGT | + |
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Preference number: 2 (lower is better) Translates to: IETCHLHIREGLVTVARDCRGTD*RDRVIS Trigger: ACTGATGACCCTGTCCCTGCAGTCAGTGCCTCTGCA...GTCTCTGGCAACAGTGACCAGTCCTTCCCTGATGTGCAGGTGACAGGTCTCTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
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| 3UTR-3UTR GCA 90 bp | ACTACACCTACAGAGTCTTGGCACTACCCGGACACGGGGTCTTCACACTTAAACGTCTCACCATGGCCATaGCTCTGTCTCAAGTCCTGC | + |
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Preference number: 2 (lower is better) Translates to: TTPTESWHYPDTGSSHLNVSPWP*LCLKSC Trigger: GCAGGACTTGAGACAGAGGCATGGCCATGGTGAGAC...GTTTAAGTGTGAAGACCCCGTGTCCGGGTAGTGCCAAGACTCTGTAGGTGTAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| 3UTR-3UTR GCA 90 bp | ATAGAGACCTGTCACCTGCACATCAGGGAAGGACTGGTCACTGTTGCCAGAGACTTTCGTTTCCACTTGTaGATCTCCTCCTCCATCTTG | + |
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Preference number: 2 (lower is better) Translates to: IETCHLHIREGLVTVARDFRFHL*ISSSIL Trigger: CAAGATGGAGGAGGAGATGCACAAGTGGAAACGAAA...GTCTCTGGCAACAGTGACCAGTCCTTCCCTGATGTGCAGGTGACAGGTCTCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
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| 3UTR CCA 72 bp | TTTCTGAGGGCCCGGCACACAGCTGCTGAGCAAGGCTaGCCGGCTGGGCTGGGCTGCACTGTCTCAGTGGGG | + |
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Preference number: 3 (lower is better) Translates to: FLRARHTAAEQG*PAGLGCTVSVG Trigger: CCCCACTGAGACAGTGCAGCCCAGCCCAGCCGGCCAGCCTTGCTCAGCAGCTGTGTGCCGGGCCCTCAGAAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| 3UTR GCA 72 bp | ACAGCTGCTGAGCAAGGCTGGCCGGCTGGGCTGGGCTaGACTGTCTCAGTGGGGAGACCTGAAAGATGGCCC | + |
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Preference number: 3 (lower is better) Translates to: TAAEQGWPAGLG*TVSVGRPERWP Trigger: GGGCCATCTTTCAGGTCTCCCCACTGAGACAGTGCAGCCCAGCCCAGCCGGCCAGCCTTGCTCAGCAGCTGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| 3UTR CCA 72 bp | GGCACACAGCTGCTGAGCAAGGCTGGCCGGCTGGGCTaGGCTGCACTGTCTCAGTGGGGAGACCTGAAAGAT | + |
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Preference number: 3 (lower is better) Translates to: GTQLLSKAGRLG*AALSQWGDLKD Trigger: ATCTTTCAGGTCTCCCCACTGAGACAGTGCAGCCCAGCCCAGCCGGCCAGCCTTGCTCAGCAGCTGTGTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| 3UTR-3UTR CAA 90 bp | GACTGGGTAGGGCATGAAGAGGTGGGGTCTGTGCTGGTGCCGGGGAGTCTGGGGGAGGAGCCGCTGGACTaGGTTTCCACCTTCTCGAAG | + |
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Preference number: 3 (lower is better) Translates to: DWVGHEEVGSVLVPGSLGEEPLD*VSTFSK Trigger: CTTCGAGAAGGTGGAAACCAAGTCCAGCGGCTCCTC...CCCCAGACTCCCCGGCACCAGCACAGACCCCACCTCTTCATGCCCTACCCAGTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
||
| 3UTR TCA 72 bp | TTCCAGGACGCCGGCAGCTTTCCGGGCGGTCTGAGATaGGCTTGTCCAACTCCTCAGGGTTGGCCATGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: FQDAGSFPGGLR*ACPTPQGWPCC Trigger: GCAGCATGGCCAACCCTGAGGAGTTGGACAAGCTCATCTCAGACCGCCCGGAAAGCTGCCGGCGTCCTGGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
||
| 3UTR-3UTR CAA 90 bp | ATAGAGACCTGTCACCTGCACATCAGGGAAGGACTGGTCACTGTTGCCAGAGACGCCCACAGGCAGCCCTaGCGTGAGGAGCCGCTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: IETCHLHIREGLVTVARDAHRQP*REEPLD Trigger: GTCCAGCGGCTCCTCACGCAAGGGCTGCCTGTGGGC...GTCTCTGGCAACAGTGACCAGTCCTTCCCTGATGTGCAGGTGACAGGTCTCTAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCCCAGGAACCCTACCCATGGCTGGCTGCGGGAGAGGCCCTGGGCTGAGACTGTCCTTTCGTTTCCACTaGTGCATCTCCTCCTCCATC | + |
|
Preference number: 3 (lower is better) Translates to: SPGTLPMAGCGRGPGLRLSFRFH*CISSSI Trigger: GATGGAGGAGGAGATGCACAAGTGGAAACGAAAGGA...CAGTCTCAGCCCAGGGCCTCTCCCGCAGCCAGCCATGGGTAGGGTTCCTGGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
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| 3UTR TCA 72 bp | GAGGTAGAGGGCTTGCCATCCCCGCCTTGCTTCTGTTaGGTGCCCCAGGAGTGTCCTGTGGCAGCATGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: EVEGLPSPPCFC*VPQECPVAACW Trigger: CCAACATGCTGCCACAGGACACTCCTGGGGCACTCAACAGAAGCAAGGCGGGGATGGCAAGCCCTCTACCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| 3UTR TCA 72 bp | TCGTTTTCCAGGACGCCGGCAGCTTTCCGGGCGGTCTaGGATGAGCTTGTCCAACTCCTCAGGGTTGGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: SFSRTPAAFRAV*DELVQLLRVGH Trigger: ATGGCCAACCCTGAGGAGTTGGACAAGCTCATCTCAGACCGCCCGGAAAGCTGCCGGCGTCCTGGAAAACGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
||
| 3UTR CCA 72 bp | CGCCTTGCTTCTGTTGAGTGCCCCAGGAGTGTCCTGTaGCAGCATGTTGGGGTGCAGGAGGAACCACAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: RLASVECPRSVL*QHVGVQEEPQA Trigger: AGCTTGTGGTTCCTCCTGCACCCCAACATGCTGCCACAGGACACTCCTGGGGCACTCAACAGAAGCAAGGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
||
| 3UTR CCA 72 bp | CCATGGCCATGCCTCTGTCTCAAGTCCTGCAGAAGATaGGGAGGTAGAGGGCTTGCCATCCCCGCCTTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: PWPCLCLKSCRR*GGRGLAIPALL Trigger: AAGCAAGGCGGGGATGGCAAGCCCTCTACCTCCCCATCTTCTGCAGGACTTGAGACAGAGGCATGGCCATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
||
| 3UTR CCA 72 bp | GCCCCTGATGACAAGACCTCACGCTGCCCTTACAGATaGCTGGCCTGCCTGCTGGGTCTTCTGAACAACCTG | + |
|
Preference number: 3 (lower is better) Translates to: APDDKTSRCPYR*LACLLGLLNNL Trigger: CAGGTTGTTCAGAAGACCCAGCAGGCAGGCCAGCCATCTGTAAGGGCAGCGTGAGGTCTTGTCATCAGGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
||
| 3UTR-3UTR CAA 90 bp | TCAGGGAAGGACTGGTCACTGTTGCCAGAGACAGGGGTCAGGCTTGGGGCTCCCTTGTTCAGGGACAGGTaGTGCCTCACGGAGTTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: SGKDWSLLPETGVRLGAPLFRDR*CLTEFF Trigger: GAAGAACTCCGTGAGGCACAACCTGTCCCTGAACAA...GGGAGCCCCAAGCCTGACCCCTGTCTCTGGCAACAGTGACCAGTCCTTCCCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGAGCCGGGTCTCACCATGGCCATGCCTCTGTCTCAAGTCCTGCAGAAGATGGTTCCCCCGTCAGCAATaGGCTCGAGACACGGTACAG | + |
|
Preference number: 3 (lower is better) Translates to: KSRVSPWPCLCLKSCRRWFPRQQ*ARDTVQ Trigger: CTGTACCGTGTCTCGAGCCAATTGCTGACGGGGGAA...CCATCTTCTGCAGGACTTGAGACAGAGGCATGGCCATGGTGAGACCCGGCTCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
||
| 3UTR-3UTR CAA 90 bp | AAGAGTGGTGAGCGCTCGAGCCCAAGGTTCCCATCTTCCTGTTTCATGTCTCTACCCGCCTTGCTTCTGTaGAGTGCCCCAGGAGTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: KSGERSSPRFPSSCFMSLPALLL*SAPGVS Trigger: GGACACTCCTGGGGCACTCAACAGAAGCAAGGCGGG...TAGAGACATGAAACAGGAAGATGGGAACCTTGGGCTCGAGCGCTCACCACTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
||
| 3UTR-3UTR CAA 90 bp | GCTGGGGTCCAGGGCGTCCACCTCTGTGTTCATGTCACTGTTGATGTTGAGGAATCCAACTCCTCAGGGTaGGCCATGCTGCGGTGTATG | + |
|
Preference number: 3 (lower is better) Translates to: AGVQGVHLCVHVTVDVEESNSSG*AMLRCM Trigger: CATACACCGCAGCATGGCCAACCCTGAGGAGTTGGA...TTCCTCAACATCAACAGTGACATGAACACAGAGGTGGACGCCCTGGACCCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
||
| 3UTR TCA 72 bp | ACCGACAGGGCGCTACACTGGTGCTACAAAGAGTGGTaGGCGCTCGAGCCCAAGGTTCCCATCTTCCTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: TDRALHWCYKEW*ALEPKVPIFLF Trigger: AAACAGGAAGATGGGAACCTTGGGCTCGAGCGCTCACCACTCTTTGTAGCACCAGTGTAGCGCCCTGTCGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| 3UTR GCA 72 bp | CGGTGTATGGCAGCGAGGTCCTTTCGTTTCCACTTGTaGATCTCCTCCTCCATCTTGTCGATGCGAGCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: RCMAARSFRFHL*ISSSILSMRAR Trigger: CCTGGCTCGCATCGACAAGATGGAGGAGGAGATGCACAAGTGGAAACGAAAGGACCTCGCTGCCATACACCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTGGGGTCCAGGGCGTCCACCTCTGTGTTCATGTCACTGTTGATGTTGAGGAACGGTCTGAGATGAGCTaGTCCAACTCCTCAGGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: AGVQGVHLCVHVTVDVEERSEMS*SNSSGL Trigger: CAACCCTGAGGAGTTGGACAAGCTCATCTCAGACCG...TTCCTCAACATCAACAGTGACATGAACACAGAGGTGGACGCCCTGGACCCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
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| 3UTR-3UTR CAA 90 bp | ATAGAGACCTGTCACCTGCACATCAGGGAAGGACTGGTCACTGTTGCCAGAGACATCTCCTCCTCCATCTaGTCGATGCGAGCCAGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: IETCHLHIREGLVTVARDISSSI*SMRARF Trigger: GAACCTGGCTCGCATCGACAAGATGGAGGAGGAGAT...GTCTCTGGCAACAGTGACCAGTCCTTCCCTGATGTGCAGGTGACAGGTCTCTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
||
| 3UTR CCA 72 bp | GTCTTAGCACCACAGTCCTCCCCAAACTTGATGCTATaGTACCTCCTCTCCCGTATATCCCCAGGAGCAGAT | + |
|
Preference number: 3 (lower is better) Translates to: VLAPQSSPNLML*YLLSRISPGAD Trigger: ATCTGCTCCTGGGGATATACGGGAGAGGAGGTACCATAGCATCAAGTTTGGGGAGGACTGTGGTGCTAAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
||
| 3UTR-3UTR CAA 90 bp | GTTGTGAACTCTCAGGCATGGGGTCAGACATCAAGATGGAAAAGAGCAGGTGGAACTAGGGAGTTAGGTTaGCTGAGCAGTGGGGAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: VVNSQAWGQTSRWKRAGGTRELG*LSSGES Trigger: AGACTCCCCACTGCTCAGCAAACCTAACTCCCTAGT...TCCACCTGCTCTTTTCCATCTTGATGTCTGACCCCATGCCTGAGAGTTCACAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
||
| 3UTR-3UTR CAA 90 bp | GTTGTGAACTCTCAGGCATGGGGTCAGACATCAAGATGGAAAAGAGCAGGTGGACAGTCCTCCCCAAACTaGATGCTATGGTACCTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: VVNSQAWGQTSRWKRAGGQSSPN*MLWYLL Trigger: GAGGAGGTACCATAGCATCAAGTTTGGGGAGGACTG...TCCACCTGCTCTTTTCCATCTTGATGTCTGACCCCATGCCTGAGAGTTCACAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
||
| 3UTR CCA 72 bp | TCTTCTGAACAACCTGGGGTTGTGAACTCTCAGGCATaGGGTCAGACATCAAGATGGAAAAGAGCAGGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: SSEQPGVVNSQA*GQTSRWKRAGG Trigger: TCCACCTGCTCTTTTCCATCTTGATGTCTGACCCCATGCCTGAGAGTTCACAACCCCAGGTTGTTCAGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
||
| CDS-3UTR GCA 90 bp | TCCCCAGGAACCCTACCCATGGCTGGCTGCGGGAGAGGCCCTGGGCTGAGACTGCCACGGCAGTCTGGCTaGGGCGGAGCAGGGGACGTG | + |
|
Preference number: 4 (lower is better) Translates to: SPGTLPMAGCGRGPGLRLPRQSG*GGAGDV Trigger: CACGTCCCCTGCTCCGCCGCAGCCAGACTGCCGTGG...CAGTCTCAGCCCAGGGCCTCTCCCGCAGCCAGCCATGGGTAGGGTTCCTGGGGA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
||
| CDS-3UTR TCA 90 bp | GGACGCCGGCAGCTTTCCGGGCGGTCTGAGATGAGCTTGTCCAACTCCTCAGGGGCACGTCCACGGCCGTaGGCCAGGACAGCGACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: GRRQLSGRSEMSLSNSSGARPRP*ARTATE Trigger: TTCAGTCGCTGTCCTGGCTCACGGCCGTGGACGTGC...CCCTGAGGAGTTGGACAAGCTCATCTCAGACCGCCCGGAAAGCTGCCGGCGTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
||
| CDS-3UTR GCA 90 bp | GTGAGGACAGACATAGCCAAGAAGAGGCAGCGGGCACCGACAGGGCGCTACACTCCACGGCAGTCTGGCTaGGGCGGAGCAGGGGACGTG | + |
|
Preference number: 4 (lower is better) Translates to: VRTDIAKKRQRAPTGRYTPRQSG*GGAGDV Trigger: CACGTCCCCTGCTCCGCCGCAGCCAGACTGCCGTGG...AGTGTAGCGCCCTGTCGGTGCCCGCTGCCTCTTCTTGGCTATGTCTGTCCTCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
||
| CDS-3UTR GCA 90 bp | CCCGCCTTGCTTCTGTTGAGTGCCCCAGGAGTGTCCTGTGGCAGCATGTTGGGGCTACCCATGGCTGGCTaGGGGAGAGGCCCTGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PALLLLSAPGVSCGSMLGLPMAG*GRGPGL Trigger: CAGCCCAGGGCCTCTCCCGCAGCCAGCCATGGGTAG...CCCCAACATGCTGCCACAGGACACTCCTGGGGCACTCAACAGAAGCAAGGCGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| CDS-3UTR CCA 90 bp | ACATCAGGGAAGGACTGGTCACTGTTGCCAGAGACAGGGGTCAGGCTTGGGGCTGCGGAGCAGGGGACGTaGGGCCGCACCCACATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TSGKDWSLLPETGVRLGAAEQGT*GRTHMQ Trigger: CTGCATGTGGGTGCGGCCCCACGTCCCCTGCTCCGC...AGCCCCAAGCCTGACCCCTGTCTCTGGCAACAGTGACCAGTCCTTCCCTGATGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
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| CDS-3UTR CCA 90 bp | CTGATGACAAGACCTCACGCTGCCCTTACAGATGGCTGGCCTGCCTGCTGGGTCAGCCCAGCACACCCCTaGGGACCACGGCAGTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LMTRPHAALTDGWPACWVSPAHP*GPRQSG Trigger: GCCAGACTGCCGTGGTCCCCAGGGGTGTGCTGGGCT...GACCCAGCAGGCAGGCCAGCCATCTGTAAGGGCAGCGTGAGGTCTTGTCATCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| CDS-3UTR CCA 90 bp | CGTTTTCCAGGACGCCGGCAGCTTTCCGGGCGGTCTGAGATGAGCTTGTCCAACAGCCCAGCACACCCCTaGGGACCACGGCAGTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RFPGRRQLSGRSEMSLSNSPAHP*GPRQSG Trigger: GCCAGACTGCCGTGGTCCCCAGGGGTGTGCTGGGCT...GTTGGACAAGCTCATCTCAGACCGCCCGGAAAGCTGCCGGCGTCCTGGAAAACG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
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| 3UTR CAA 72 bp | GGACGCCGGCAGCTTTCCGGGCGGTCTGAGATGAGCTaGTCCAACTCCTCAGGGTTGGCCATGCTGCGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GRRQLSGRSEMS*SNSSGLAMLRC Trigger: ACACCGCAGCATGGCCAACCCTGAGGAGTTGGACAAGCTCATCTCAGACCGCCCGGAAAGCTGCCGGCGTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
||
| CDS-3UTR TCA 90 bp | CGTTTTCCAGGACGCCGGCAGCTTTCCGGGCGGTCTGAGATGAGCTTGTCCAACTTCCTGGAGGCCCGATaGTGCCTGGCCTCCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RFPGRRQLSGRSEMSLSNFLEAR*CLASCR Trigger: CCTGCAGGAGGCCAGGCATCATCGGGCCTCCAGGAA...GTTGGACAAGCTCATCTCAGACCGCCCGGAAAGCTGCCGGCGTCCTGGAAAACG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
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| CDS-3UTR GCA 90 bp | AGAAGATGGGGAGGTAGAGGGCTTGCCATCCCCGCCTTGCTTCTGTTGAGTGCCCCGGCAGGAGGGCACTaGTGGGACCCCAGAGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RRWGGRGLAIPALLLLSAPAGGH*WDPRGR Trigger: TCTGCCTCTGGGGTCCCAGCAGTGCCCTCCTGCCGG...GGCACTCAACAGAAGCAAGGCGGGGATGGCAAGCCCTCTACCTCCCCATCTTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| CDS-3UTR GCA 90 bp | GTGAGGACAGACATAGCCAAGAAGAGGCAGCGGGCACCGACAGGGCGCTACACTTGGGGCCACACCGTCTaGGGCAGTGGAGTAGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VRTDIAKKRQRAPTGRYTWGHTV*GSGVGS Trigger: GCTGCCTACTCCACTGCCGCAGACGGTGTGGCCCCA...AGTGTAGCGCCCTGTCGGTGCCCGCTGCCTCTTCTTGGCTATGTCTGTCCTCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| CDS-3UTR CCA 90 bp | AAGAGCCGGGTCTCACCATGGCCATGCCTCTGTCTCAAGTCCTGCAGAAGATGGGCGGAGCAGGGGACGTaGGGCCGCACCCACATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KSRVSPWPCLCLKSCRRWAEQGT*GRTHMQ Trigger: CTGCATGTGGGTGCGGCCCCACGTCCCCTGCTCCGC...CCATCTTCTGCAGGACTTGAGACAGAGGCATGGCCATGGTGAGACCCGGCTCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| CDS-3UTR TCA 90 bp | CCCTTACAGATGGCTGGCCTGCCTGCTGGGTCTTCTGAACAACCTGGGGTTGTGGCACGTCCACGGCCGTaGGCCAGGACAGCGACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: PLQMAGLPAGSSEQPGVVARPRP*ARTATE Trigger: TTCAGTCGCTGTCCTGGCTCACGGCCGTGGACGTGC...CACAACCCCAGGTTGTTCAGAAGACCCAGCAGGCAGGCCAGCCATCTGTAAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| CDS-3UTR GCA 90 bp | CCCGCCTTGCTTCTGTTGAGTGCCCCAGGAGTGTCCTGTGGCAGCATGTTGGGGCTGAGACGCATGCATTaGCCCGTGGGCCTGTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: PALLLLSAPGVSCGSMLGLRRMH*PVGLWV Trigger: TACCCACAGGCCCACGGGGCAATGCATGCGTCTCAG...CCCCAACATGCTGCCACAGGACACTCCTGGGGCACTCAACAGAAGCAAGGCGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
||
| CDS-3UTR GCA 90 bp | CCGGGTCTCACCATGGCCATGCCTCTGTCTCAAGTCCTGCAGAAGATGGGGAGGGGCTGGAGCTGGTGGTaGAGAGGCACTGACTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PGLTMAMPLSQVLQKMGRGWSWW*RGTDCR Trigger: CCTGCAGTCAGTGCCTCTGCACCACCAGCTCCAGCC...CCTCCCCATCTTCTGCAGGACTTGAGACAGAGGCATGGCCATGGTGAGACCCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| CDS-3UTR CCA 90 bp | AGAAGATGGGGAGGTAGAGGGCTTGCCATCCCCGCCTTGCTTCTGTTGAGTGCCGGCAGCTGTGGGCCATaGCCACCGTGGTGGCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: RRWGGRGLAIPALLLLSAGSCGP*PPWWHE Trigger: CTCATGCCACCACGGTGGCCATGGCCCACAGCTGCC...GGCACTCAACAGAAGCAAGGCGGGGATGGCAAGCCCTCTACCTCCCCATCTTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| CDS-3UTR CCA 90 bp | AGAAGATGGGGAGGTAGAGGGCTTGCCATCCCCGCCTTGCTTCTGTTGAGTGCCCAGGAACCCTACCCATaGCTGGCTGCGGGAGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RRWGGRGLAIPALLLLSAQEPYP*LAAGEA Trigger: GGCCTCTCCCGCAGCCAGCCATGGGTAGGGTTCCTG...GGCACTCAACAGAAGCAAGGCGGGGATGGCAAGCCCTCTACCTCCCCATCTTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
||
| CDS-3UTR CCA 90 bp | GGACGCCGGCAGCTTTCCGGGCGGTCTGAGATGAGCTTGTCCAACTCCTCAGGGCCTCCTGCAGGGAACTaGTTCATCTGGCTGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GRRQLSGRSEMSLSNSSGPPAGN*FIWLAL Trigger: CAGAGCCAGCCAGATGAACCAGTTCCCTGCAGGAGG...CCCTGAGGAGTTGGACAAGCTCATCTCAGACCGCCCGGAAAGCTGCCGGCGTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
||
| CDS-3UTR TCA 90 bp | CAGGGCCTTTCTCCAGCTGTAGGCCATGCTCTGAGGCATAGTCAGAGGTTCCTCTTCCTGGAGGCCCGATaGTGCCTGGCCTCCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QGLSPAVGHALRHSQRFLFLEAR*CLASCR Trigger: CCTGCAGGAGGCCAGGCATCATCGGGCCTCCAGGAA...GAGGAACCTCTGACTATGCCTCAGAGCATGGCCTACAGCTGGAGAAAGGCCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
||
| CDS-3UTR TCA 90 bp | AGAAGATGGGGAGGTAGAGGGCTTGCCATCCCCGCCTTGCTTCTGTTGAGTGCCGGAGAGGCCCTGGGCTaGGACTGGGTAGGGCATGAA | + |
|
Preference number: 4 (lower is better) Translates to: RRWGGRGLAIPALLLLSAGEALG*DWVGHE Trigger: TTCATGCCCTACCCAGTCTCAGCCCAGGGCCTCTCC...GGCACTCAACAGAAGCAAGGCGGGGATGGCAAGCCCTCTACCTCCCCATCTTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
||
| CDS-3UTR GCA 90 bp | CCCGCCTTGCTTCTGTTGAGTGCCCCAGGAGTGTCCTGTGGCAGCATGTTGGGGCCATTTGCCATCTGCTaGAGTCGAGGCACGTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: PALLLLSAPGVSCGSMLGPFAIC*SRGTST Trigger: CGTGGACGTGCCTCGACTGCAGCAGATGGCAAATGG...CCCCAACATGCTGCCACAGGACACTCCTGGGGCACTCAACAGAAGCAAGGCGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
||
| CDS-3UTR GCA 90 bp | AAGAGCCGGGTCTCACCATGGCCATGCCTCTGTCTCAAGTCCTGCAGAAGATGGCCCACAGGCAGCCCTTaGGTGAGGAGCCGCTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: KSRVSPWPCLCLKSCRRWPTGSP*VRSRWT Trigger: AGTCCAGCGGCTCCTCACGCAAGGGCTGCCTGTGGG...CCATCTTCTGCAGGACTTGAGACAGAGGCATGGCCATGGTGAGACCCGGCTCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
||
| CDS-3UTR CCA 90 bp | ACATCAGGGAAGGACTGGTCACTGTTGCCAGAGACAGGGGTCAGGCTTGGGGCTCGATCAGACAGCTGCTaGGACCCCAGAGGCAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TSGKDWSLLPETGVRLGARSDSC*DPRGRG Trigger: CCCTCTGCCTCTGGGGTCCCAGCAGCTGTCTGATCG...AGCCCCAAGCCTGACCCCTGTCTCTGGCAACAGTGACCAGTCCTTCCCTGATGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
||
| 3UTR CAA 72 bp | GGAGGTAGAGGGCTTGCCATCCCCGCCTTGCTTCTGTaGAGTGCCCCAGGAGTGTCCTGTGGCAGCATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GGRGLAIPALLL*SAPGVSCGSML Trigger: CAACATGCTGCCACAGGACACTCCTGGGGCACTCAACAGAAGCAAGGCGGGGATGGCAAGCCCTCTACCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
||
| CDS-3UTR TCA 90 bp | GTGAGGACAGACATAGCCAAGAAGAGGCAGCGGGCACCGACAGGGCGCTACACTAGACTGGGTAGGGCATaGAGAGGTGGGGTCTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VRTDIAKKRQRAPTGRYTRLGRA*RGGVCA Trigger: AGCACAGACCCCACCTCTTCATGCCCTACCCAGTCT...AGTGTAGCGCCCTGTCGGTGCCCGCTGCCTCTTCTTGGCTATGTCTGTCCTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
||
| CDS-3UTR GCA 90 bp | ACATCAGGGAAGGACTGGTCACTGTTGCCAGAGACAGGGGTCAGGCTTGGGGCTACCCACATGCAGGTCTaGTGTCCCAGCCAAGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: TSGKDWSLLPETGVRLGATHMQV*CPSQGT Trigger: GGTGCCTTGGCTGGGACAGCAGACCTGCATGTGGGT...AGCCCCAAGCCTGACCCCTGTCTCTGGCAACAGTGACCAGTCCTTCCCTGATGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
||
| CDS-3UTR GCA 90 bp | CCCTTACAGATGGCTGGCCTGCCTGCTGGGTCTTCTGAACAACCTGGGGTTGTGCCTCCATCTTGTCGATaGGAGCCAGGTTCAGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PLQMAGLPAGSSEQPGVVPPSCR*EPGSGP Trigger: GGGCCCTGAACCTGGCTCGCATCGACAAGATGGAGG...CACAACCCCAGGTTGTTCAGAAGACCCAGCAGGCAGGCCAGCCATCTGTAAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
||
| CDS-3UTR GCA 90 bp | AAGAGCCGGGTCTCACCATGGCCATGCCTCTGTCTCAAGTCCTGCAGAAGATGGAAGAGGTGGGGTCTGTaGTGGTGCCGGGGAGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KSRVSPWPCLCLKSCRRWKRWGL*WCRGVW Trigger: CCAGACTCCCCGGCACCAGCACAGACCCCACCTCTT...CCATCTTCTGCAGGACTTGAGACAGAGGCATGGCCATGGTGAGACCCGGCTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
||
| CDS-3UTR CCA 90 bp | CTGATGACAAGACCTCACGCTGCCCTTACAGATGGCTGGCCTGCCTGCTGGGTCCCTCCTGCAGGGAACTaGTTCATCTGCTCAGCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LMTRPHAALTDGWPACWVPPAGN*FICSAL Trigger: CAGCGCTGAGCAGATGAACCAGTTCCCTGCAGGAGG...GACCCAGCAGGCAGGCCAGCCATCTGTAAGGGCAGCGTGAGGTCTTGTCATCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
||
| CDS-3UTR CCA 90 bp | GTGAGGACAGACATAGCCAAGAAGAGGCAGCGGGCACCGACAGGGCGCTACACTCCAACTCCTCAGGGTTaGCCATGCTGCGGTGTATGG | + |
|
Preference number: 4 (lower is better) Translates to: VRTDIAKKRQRAPTGRYTPTPQG*PCCGVW Trigger: CCATACACCGCAGCATGGCCAACCCTGAGGAGTTGG...AGTGTAGCGCCCTGTCGGTGCCCGCTGCCTCTTCTTGGCTATGTCTGTCCTCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
||
| CDS-3UTR CCA 90 bp | CAGGGCCTTTCTCCAGCTGTAGGCCATGCTCTGAGGCATAGTCAGAGGTTCCTCTGGGGCTGGAGCTGGTaGTGCAGAGGCACTGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: QGLSPAVGHALRHSQRFLWGWSW*CRGTDC Trigger: GCAGTCAGTGCCTCTGCACCACCAGCTCCAGCCCCA...GAGGAACCTCTGACTATGCCTCAGAGCATGGCCTACAGCTGGAGAAAGGCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
||
| CDS-3UTR CCA 90 bp | GGACGCCGGCAGCTTTCCGGGCGGTCTGAGATGAGCTTGTCCAACTCCTCAGGGTGTTCTTCAAGGCCATaGCGATCAGACAGCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GRRQLSGRSEMSLSNSSGCSSRP*RSDSCW Trigger: CCAGCAGCTGTCTGATCGCCATGGCCTTGAAGAACA...CCCTGAGGAGTTGGACAAGCTCATCTCAGACCGCCCGGAAAGCTGCCGGCGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
||
| CDS-3UTR TCA 90 bp | AAGTCCTGCAGAAGATGGGGAGGTAGAGGGCTTGCCATCCCCGCCTTGCTTCTGGCCACCGTGGTGGCATaGGTTAGCATGGGGGCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: KSCRRWGGRGLAIPALLLATVVA*VSMGAL Trigger: TAAAGCCCCCATGCTAACTCATGCCACCACGGTGGC...CAGAAGCAAGGCGGGGATGGCAAGCCCTCTACCTCCCCATCTTCTGCAGGACTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
||
| CDS-3UTR GCA 90 bp | CCGGGTCTCACCATGGCCATGCCTCTGTCTCAAGTCCTGCAGAAGATGGGGAGGTGCAGAGGCACTGACTaGAGGGACAGGGTCATCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PGLTMAMPLSQVLQKMGRCRGTD*RDRVIS Trigger: ACTGATGACCCTGTCCCTGCAGTCAGTGCCTCTGCA...CCTCCCCATCTTCTGCAGGACTTGAGACAGAGGCATGGCCATGGTGAGACCCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
||
| CDS-3UTR CCA 90 bp | AAGTCCTGCAGAAGATGGGGAGGTAGAGGGCTTGCCATCCCCGCCTTGCTTCTGTGGGGAGTACAGCTGTaGCATTTCCTGGAGGCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: KSCRRWGGRGLAIPALLLWGVQL*HFLEAR Trigger: TCGGGCCTCCAGGAAATGCCACAGCTGTACTCCCCA...CAGAAGCAAGGCGGGGATGGCAAGCCCTCTACCTCCCCATCTTCTGCAGGACTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| CDS-3UTR CCA 90 bp | CCGGGTCTCACCATGGCCATGCCTCTGTCTCAAGTCCTGCAGAAGATGGGGAGGAGAGGGAACGGGATTTaGGTAGCTGGGGAGTACAGC | + |
|
Preference number: 4 (lower is better) Translates to: PGLTMAMPLSQVLQKMGRRGNGI*VAGEYS Trigger: GCTGTACTCCCCAGCTACCCAAATCCCGTTCCCTCT...CCTCCCCATCTTCTGCAGGACTTGAGACAGAGGCATGGCCATGGTGAGACCCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
||
| CDS-3UTR CCA 90 bp | GTGAGGACAGACATAGCCAAGAAGAGGCAGCGGGCACCGACAGGGCGCTACACTTGCGTGAGGAGCCGCTaGACTTGGTTTCCACCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VRTDIAKKRQRAPTGRYTCVRSR*TWFPPS Trigger: AGAAGGTGGAAACCAAGTCCAGCGGCTCCTCACGCA...AGTGTAGCGCCCTGTCGGTGCCCGCTGCCTCTTCTTGGCTATGTCTGTCCTCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| CDS-3UTR CCA 90 bp | GGTTCCTCTCCTAGGAGAATGTGTGTGCTCAGAGTTTCCCCTCCTGTGTCTCCAAGGTGTGCCTGGGGCTaGAGCTGGTGGTGCAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GSSPRRMCVLRVSPPVSPRCAWG*SWWCRG Trigger: GCCTCTGCACCACCAGCTCCAGCCCCAGGCACACCT...TGGAGACACAGGAGGGGAAACTCTGAGCACACACATTCTCCTAGGAGAGGAACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
||
| CDS-3UTR TCA 90 bp | AAGAGCCGGGTCTCACCATGGCCATGCCTCTGTCTCAAGTCCTGCAGAAGATGGGCTTTCCGGGCGGTCTaGGATGAGCTTGTCCAACTC | + |
|
Preference number: 4 (lower is better) Translates to: KSRVSPWPCLCLKSCRRWAFRAV*DELVQL Trigger: GAGTTGGACAAGCTCATCTCAGACCGCCCGGAAAGC...CCATCTTCTGCAGGACTTGAGACAGAGGCATGGCCATGGTGAGACCCGGCTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
||
| CDS-3UTR TCA 90 bp | AGAAGATGGGGAGGTAGAGGGCTTGCCATCCCCGCCTTGCTTCTGTTGAGTGCCCCAGCGTGTCTAGGCTaGAGCTGTCCTCCTTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: RRWGGRGLAIPALLLLSAPACLG*SCPPSS Trigger: AGATGAAGGAGGACAGCTTCAGCCTAGACACGCTGG...GGCACTCAACAGAAGCAAGGCGGGGATGGCAAGCCCTCTACCTCCCCATCTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| CDS-3UTR GCA 90 bp | GGAGTGTCCTGTGGCAGCATGTTGGGGTGCAGGAGGAACCACAAGCTGTCATTTCGCCCATTTGCCATCTaGTGCAGTCGAGGCACGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GVSCGSMLGCRRNHKLSFRPFAI*CSRGTS Trigger: GGACGTGCCTCGACTGCAGCAGATGGCAAATGGGCG...AAATGACAGCTTGTGGTTCCTCCTGCACCCCAACATGCTGCCACAGGACACTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| CDS-3UTR GCA 90 bp | GGGTCCAGGGCGTCCACCTCTGTGTTCATGTCACTGTTGATGTTGAGGAAGTCCCGCCCATTTGCCATCTaGTGCAGTCGAGGCACGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GSRASTSVFMSLLMLRKSRPFAI*CSRGTS Trigger: GGACGTGCCTCGACTGCAGCAGATGGCAAATGGGCG...GGACTTCCTCAACATCAACAGTGACATGAACACAGAGGTGGACGCCCTGGACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
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| CDS-3UTR CCA 90 bp | GTTGTGAACTCTCAGGCATGGGGTCAGACATCAAGATGGAAAAGAGCAGGTGGAGCAGGAGGGCACTGCTaGGACCCCAGAGGCAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VVNSQAWGQTSRWKRAGGAGGHC*DPRGRG Trigger: CCCTCTGCCTCTGGGGTCCCAGCAGTGCCCTCCTGC...TCCACCTGCTCTTTTCCATCTTGATGTCTGACCCCATGCCTGAGAGTTCACAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| CDS-3UTR CCA 90 bp | AAGTCCTGCAGAAGATGGGGAGGTAGAGGGCTTGCCATCCCCGCCTTGCTTCTGAGGAGCCGCTGGACTTaGTTTCCACCTTCTCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: KSCRRWGGRGLAIPALLLRSRWT*FPPSRS Trigger: GCTTCGAGAAGGTGGAAACCAAGTCCAGCGGCTCCT...CAGAAGCAAGGCGGGGATGGCAAGCCCTCTACCTCCCCATCTTCTGCAGGACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| CDS-3UTR CCA 90 bp | GACCTCACGCTGCCCTTACAGATGGCTGGCCTGCCTGCTGGGTCTTCTGAACAAGGTCATCAGTGGCTTTaGTGGGAGTTGGGAGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: DLTLPLQMAGLPAGSSEQGHQWL*WELGDG Trigger: GCCATCTCCCAACTCCCACCAAAGCCACTGATGACC...TTGTTCAGAAGACCCAGCAGGCAGGCCAGCCATCTGTAAGGGCAGCGTGAGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| CDS-3UTR CCA 90 bp | GACCTCACGCTGCCCTTACAGATGGCTGGCCTGCCTGCTGGGTCTTCTGAACAAGGACAGGGTCATCAGTaGCTTTGGTGGGAGTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: DLTLPLQMAGLPAGSSEQGQGHQ*LWWELG Trigger: TCCCAACTCCCACCAAAGCCACTGATGACCCTGTCC...TTGTTCAGAAGACCCAGCAGGCAGGCCAGCCATCTGTAAGGGCAGCGTGAGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| CDS-3UTR CCA 90 bp | ACATCAGGGAAGGACTGGTCACTGTTGCCAGAGACAGGGGTCAGGCTTGGGGCTGGGAACTGGTTCATCTaGCTGGCTCTGTGGTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TSGKDWSLLPETGVRLGAGNWFI*LALWLP Trigger: AGGCAACCACAGAGCCAGCCAGATGAACCAGTTCCC...AGCCCCAAGCCTGACCCCTGTCTCTGGCAACAGTGACCAGTCCTTCCCTGATGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
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| 3UTR CAA 72 bp | CTGTTGAGTGCCCCAGGAGTGTCCTGTGGCAGCATGTaGGGGTGCAGGAGGAACCACAAGCTGTCATTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LLSAPGVSCGSM*GCRRNHKLSFP Trigger: GGGAAATGACAGCTTGTGGTTCCTCCTGCACCCCAACATGCTGCCACAGGACACTCCTGGGGCACTCAACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| CDS-3UTR TCA 90 bp | GTTGTGAACTCTCAGGCATGGGGTCAGACATCAAGATGGAAAAGAGCAGGTGGAAGCCAGGACAGCGACTaGAGGTCCCCAGGGAGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: VVNSQAWGQTSRWKRAGGSQDSD*RSPGRS Trigger: CGACCTCCCTGGGGACCTTCAGTCGCTGTCCTGGCT...TCCACCTGCTCTTTTCCATCTTGATGTCTGACCCCATGCCTGAGAGTTCACAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| CDS-3UTR TCA 90 bp | GTTGTGAACTCTCAGGCATGGGGTCAGACATCAAGATGGAAAAGAGCAGGTGGACAGGCAGCCCTTGCGTaGGGAGCCGCTGGACTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VVNSQAWGQTSRWKRAGGQAALA*GAAGLG Trigger: ACCAAGTCCAGCGGCTCCTCACGCAAGGGCTGCCTG...TCCACCTGCTCTTTTCCATCTTGATGTCTGACCCCATGCCTGAGAGTTCACAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| CDS-3UTR GCA 90 bp | CAGGGCCTTTCTCCAGCTGTAGGCCATGCTCTGAGGCATAGTCAGAGGTTCCTCGTCTATCCGCCCATTTaGCATCTGCTGCAGTCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QGLSPAVGHALRHSQRFLVYPPI*HLLQSR Trigger: CCTCGACTGCAGCAGATGGCAAATGGGCGGATAGAC...GAGGAACCTCTGACTATGCCTCAGAGCATGGCCTACAGCTGGAGAAAGGCCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| CDS-3UTR GCA 90 bp | CCGGGTCTCACCATGGCCATGCCTCTGTCTCAAGTCCTGCAGAAGATGGGGAGGCACTCACGGGCAAGCTaGCTGTTTTGCTGTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PGLTMAMPLSQVLQKMGRHSRAS*LFCCSS Trigger: TGAAGAACAGCAAAACAGGCAGCTTGCCCGTGAGTG...CCTCCCCATCTTCTGCAGGACTTGAGACAGAGGCATGGCCATGGTGAGACCCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| CDS-3UTR CCA 90 bp | GTGAGGACAGACATAGCCAAGAAGAGGCAGCGGGCACCGACAGGGCGCTACACTAAACCTGTATTCCTGTaGAGAGCAGTGGTGGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VRTDIAKKRQRAPTGRYTKPVFL*RAVVAV Trigger: CACAGCCACCACTGCTCTCCACAGGAATACAGGTTT...AGTGTAGCGCCCTGTCGGTGCCCGCTGCCTCTTCTTGGCTATGTCTGTCCTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| CDS-3UTR CCA 90 bp | CTGATGACAAGACCTCACGCTGCCCTTACAGATGGCTGGCCTGCCTGCTGGGTCAGCTGTAGGAGTAGATaGGCTTGGGGTAGTGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LMTRPHAALTDGWPACWVSCRSR*AWGSVW Trigger: CCAAACACTACCCCAAGCCCATCTACTCCTACAGCT...GACCCAGCAGGCAGGCCAGCCATCTGTAAGGGCAGCGTGAGGTCTTGTCATCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| CDS-3UTR CCA 90 bp | CCCTTACAGATGGCTGGCCTGCCTGCTGGGTCTTCTGAACAACCTGGGGTTGTGAATAGGCTTGTTCCCTaGTGTACCCAGGTACTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: PLQMAGLPAGSSEQPGVVNRLVP*CTQVLR Trigger: GCGCAGTACCTGGGTACACCAGGGAACAAGCCTATT...CACAACCCCAGGTTGTTCAGAAGACCCAGCAGGCAGGCCAGCCATCTGTAAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
||
| 3UTR CAA 72 bp | CTGCGGTGTATGGCAGCGAGGTCCTTTCGTTTCCACTaGTGCATCTCCTCCTCCATCTTGTCGATGCGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LRCMAARSFRFH*CISSSILSMRA Trigger: GGCTCGCATCGACAAGATGGAGGAGGAGATGCACAAGTGGAAACGAAAGGACCTCGCTGCCATACACCGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
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| 3UTR CAA 72 bp | GGGTCCAGGGCGTCCACCTCTGTGTTCATGTCACTGTaGATGTTGAGGAAGTCCCCAGGAACCCTACCCATG | + |
|
Preference number: 4 (lower is better) Translates to: GSRASTSVFMSL*MLRKSPGTLPM Trigger: CATGGGTAGGGTTCCTGGGGACTTCCTCAACATCAACAGTGACATGAACACAGAGGTGGACGCCCTGGACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
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| CDS-3UTR TCA 90 bp | GTCCCAAGGTGGGCTCTGCCAGGAGTCAGGCTATTAAGAGCCGGGTCTCACCATTGTGCCCCGAGCTTCTaGTCATTTCTGACATTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VPRWALPGVRLLRAGSHHCAPSF*SFLTFW Trigger: CCAGAATGTCAGAAATGATCAGAAGCTCGGGGCACA...ATGGTGAGACCCGGCTCTTAATAGCCTGACTCCTGGCAGAGCCCACCTTGGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| CDS-3UTR TCA 90 bp | ACTACACCTACAGAGTCTTGGCACTACCCGGACACGGGGTCTTCACACTTAAACCCGGGCGGTCTGAGATaGGCTTGTCCAACTCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TTPTESWHYPDTGSSHLNPGGLR*ACPTPQ Trigger: CTGAGGAGTTGGACAAGCTCATCTCAGACCGCCCGG...GTTTAAGTGTGAAGACCCCGTGTCCGGGTAGTGCCAAGACTCTGTAGGTGTAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| CDS-3UTR GCA 90 bp | ATAGAGACCTGTCACCTGCACATCAGGGAAGGACTGGTCACTGTTGCCAGAGACCCATTTGCCATCTGCTaGAGTCGAGGCACGTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: IETCHLHIREGLVTVARDPFAIC*SRGTST Trigger: CGTGGACGTGCCTCGACTGCAGCAGATGGCAAATGG...GTCTCTGGCAACAGTGACCAGTCCTTCCCTGATGTGCAGGTGACAGGTCTCTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
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| CDS-3UTR GCA 90 bp | AAGAGTGGTGAGCGCTCGAGCCCAAGGTTCCCATCTTCCTGTTTCATGTCTCTAACCCACATGCAGGTCTaGTGTCCCAGCCAAGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: KSGERSSPRFPSSCFMSLTHMQV*CPSQGT Trigger: GGTGCCTTGGCTGGGACAGCAGACCTGCATGTGGGT...TAGAGACATGAAACAGGAAGATGGGAACCTTGGGCTCGAGCGCTCACCACTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| CDS-3UTR GCA 90 bp | AAGAGTGGTGAGCGCTCGAGCCCAAGGTTCCCATCTTCCTGTTTCATGTCTCTACCTCAGGGTTGGCCATaGTGCGGTGTATGGCAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: KSGERSSPRFPSSCFMSLPQGWP*CGVWQR Trigger: TCGCTGCCATACACCGCAGCATGGCCAACCCTGAGG...TAGAGACATGAAACAGGAAGATGGGAACCTTGGGCTCGAGCGCTCACCACTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| CDS-3UTR CCA 90 bp | AAGAGTGGTGAGCGCTCGAGCCCAAGGTTCCCATCTTCCTGTTTCATGTCTCTATGTGGAGAGCAGTGGTaGCTGTGCCCCGAGCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KSGERSSPRFPSSCFMSLCGEQW*LCPELL Trigger: CAGAAGCTCGGGGCACAGCCACCACTGCTCTCCACA...TAGAGACATGAAACAGGAAGATGGGAACCTTGGGCTCGAGCGCTCACCACTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
||
| CDS-3UTR CCA 90 bp | ATAGAGACCTGTCACCTGCACATCAGGGAAGGACTGGTCACTGTTGCCAGAGACTGGGGAGTACAGCTGTaGCATTTCCTGGAGGCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: IETCHLHIREGLVTVARDWGVQL*HFLEAR Trigger: TCGGGCCTCCAGGAAATGCCACAGCTGTACTCCCCA...GTCTCTGGCAACAGTGACCAGTCCTTCCCTGATGTGCAGGTGACAGGTCTCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
||
| CDS-3UTR CCA 90 bp | GCTGGGGTCCAGGGCGTCCACCTCTGTGTTCATGTCACTGTTGATGTTGAGGAAAGAGGGAACGGGATTTaGGTAGCTGGGGAGTACAGC | + |
|
Preference number: 4 (lower is better) Translates to: AGVQGVHLCVHVTVDVEERGNGI*VAGEYS Trigger: GCTGTACTCCCCAGCTACCCAAATCCCGTTCCCTCT...TTCCTCAACATCAACAGTGACATGAACACAGAGGTGGACGCCCTGGACCCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
||
| CDS-3UTR CCA 90 bp | CAGGGCCTTTCTCCAGCTGTAGGCCATGCTCTGAGGCATAGTCAGAGGTTCCTCGTAGTGTTTGGGGTGTaGCTCCTGAGACGCATGCAT | + |
|
Preference number: 4 (lower is better) Translates to: QGLSPAVGHALRHSQRFLVVFGV*LLRRMH Trigger: ATGCATGCGTCTCAGGAGCCACACCCCAAACACTAC...GAGGAACCTCTGACTATGCCTCAGAGCATGGCCTACAGCTGGAGAAAGGCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
||
| CDS-3UTR CCA 90 bp | AGGACACACTACTGTGTCCCAAGGTGGGCTCTGCCAGGAGTCAGGCTATTAAGAGCTTGGGGTAGTGTTTaGGGTGTGGCTCCTGAGACG | + |
|
Preference number: 4 (lower is better) Translates to: RTHYCVPRWALPGVRLLRAWGSV*GVAPET Trigger: CGTCTCAGGAGCCACACCCCAAACACTACCCCAAGC...TCTTAATAGCCTGACTCCTGGCAGAGCCCACCTTGGGACACAGTAGTGTGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
||
| CDS-3UTR TCA 90 bp | CTGATGACAAGACCTCACGCTGCCCTTACAGATGGCTGGCCTGCCTGCTGGGTCGCTTCTGATCATTTCTaGCATTCTGGACCAAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: LMTRPHAALTDGWPACWVASDHF*HSGPNA Trigger: GGCATTTGGTCCAGAATGTCAGAAATGATCAGAAGC...GACCCAGCAGGCAGGCCAGCCATCTGTAAGGGCAGCGTGAGGTCTTGTCATCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
||
| CDS-3UTR GCA 90 bp | ACTACACCTACAGAGTCTTGGCACTACCCGGACACGGGGTCTTCACACTTAAACGGGAACTGGTTCATCTaGTCAGCGCTGGCTCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TTPTESWHYPDTGSSHLNGNWFI*SALALW Trigger: CCACAGAGCCAGCGCTGAGCAGATGAACCAGTTCCC...GTTTAAGTGTGAAGACCCCGTGTCCGGGTAGTGCCAAGACTCTGTAGGTGTAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
||
| CDS-3UTR CCA 90 bp | CAGGGCCTTTCTCCAGCTGTAGGCCATGCTCTGAGGCATAGTCAGAGGTTCCTCACATCAGGGAAGGACTaGTCACTGTTGCCAGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: QGLSPAVGHALRHSQRFLTSGKD*SLLPET Trigger: TGTCTCTGGCAACAGTGACCAGTCCTTCCCTGATGT...GAGGAACCTCTGACTATGCCTCAGAGCATGGCCTACAGCTGGAGAAAGGCCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
||
| CDS-3UTR GCA 90 bp | GGGGTCCAGGGCGTCCACCTCTGTGTTCATGTCACTGTTGATGTTGAGGAAGTCCACTCACGGGCAAGCTaGCTGTTTTGCTGTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GVQGVHLCVHVTVDVEEVHSRAS*LFCCSS Trigger: TGAAGAACAGCAAAACAGGCAGCTTGCCCGTGAGTG...GACTTCCTCAACATCAACAGTGACATGAACACAGAGGTGGACGCCCTGGACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
||
| CDS-3UTR GCA 90 bp | CCCTTACAGATGGCTGGCCTGCCTGCTGGGTCTTCTGAACAACCTGGGGTTGTGTTTCGTTTCCACTTGTaGATCTCCTCCTCCATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PLQMAGLPAGSSEQPGVVFRFHL*ISSSIL Trigger: CAAGATGGAGGAGGAGATGCACAAGTGGAAACGAAA...CACAACCCCAGGTTGTTCAGAAGACCCAGCAGGCAGGCCAGCCATCTGTAAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
||
| CDS-3UTR CCA 90 bp | AAGAGTGGTGAGCGCTCGAGCCCAAGGTTCCCATCTTCCTGTTTCATGTCTCTAAGGAGTAGATGGGCTTaGGGTAGTGTTTGGGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: KSGERSSPRFPSSCFMSLRSRWA*GSVWGV Trigger: CACACCCCAAACACTACCCCAAGCCCATCTACTCCT...TAGAGACATGAAACAGGAAGATGGGAACCTTGGGCTCGAGCGCTCACCACTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| CDS-3UTR CCA 90 bp | CCGGGTCTCACCATGGCCATGCCTCTGTCTCAAGTCCTGCAGAAGATGGGGAGGTCATTTCTGACATTCTaGACCAAATGCCACTTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: PGLTMAMPLSQVLQKMGRSFLTF*TKCHFL Trigger: TAGAAAGTGGCATTTGGTCCAGAATGTCAGAAATGA...CCTCCCCATCTTCTGCAGGACTTGAGACAGAGGCATGGCCATGGTGAGACCCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| CDS-3UTR CCA 90 bp | GTTGTGAACTCTCAGGCATGGGGTCAGACATCAAGATGGAAAAGAGCAGGTGGATGTTCTTCAAGGCCATaGCGATCAGACAGCTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: VVNSQAWGQTSRWKRAGGCSSRP*RSDSCR Trigger: CCTACAGCTGTCTGATCGCCATGGCCTTGAAGAACA...TCCACCTGCTCTTTTCCATCTTGATGTCTGACCCCATGCCTGAGAGTTCACAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| 3UTR CAA 72 bp | TTTCCTCTTGTCTTAGCACCACAGTCCTCCCCAAACTaGATGCTATGGTACCTCCTCTCCCGTATATCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FPLVLAPQSSPN*MLWYLLSRISP Trigger: TGGGGATATACGGGAGAGGAGGTACCATAGCATCAAGTTTGGGGAGGACTGTGGTGCTAAGACAAGAGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| CDS GCA 90 bp | GCAGTCTGGCTGCGGCGGAGCAGGGGACGTGGGGCCGCACCCACATaGAGGTCTGCTGTCCCAGCCAAGGCACCTGGGTGTGGATGTGTC | + |
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Preference number: 5 (lower is better) Translates to: AVWLRRSRGRGAAPT*RSAVPAKAPGCGCV Trigger: GACACATCCACACCCAGGTGCCTTGGCTGGGACAGCAGACCTGCATGTGGGTGCGGCCCCACGTCCCCTGCTCCGCCGCAGCCAGACTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044790.12 ENSMUST00000129530.8 ENSMUST00000144050.2 |
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| CDS-3UTR CAA 90 bp | CCGGGTCTCACCATGGCCATGCCTCTGTCTCAAGTCCTGCAGAAGATGGGGAGGGCCCACAGGCAGCCCTaGCGTGAGGAGCCGCTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: PGLTMAMPLSQVLQKMGRAHRQP*REEPLD Trigger: GTCCAGCGGCTCCTCACGCAAGGGCTGCCTGTGGGC...CCTCCCCATCTTCTGCAGGACTTGAGACAGAGGCATGGCCATGGTGAGACCCGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| CDS-3UTR CAA 90 bp | GTGAGGACAGACATAGCCAAGAAGAGGCAGCGGGCACCGACAGGGCGCTACACTAGACAGGGGTCAGGCTaGGGGCTCCCAGGTCGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VRTDIAKKRQRAPTGRYTRQGSG*GLPGRS Trigger: GCTGCGACCTGGGAGCCCCAAGCCTGACCCCTGTCT...AGTGTAGCGCCCTGTCGGTGCCCGCTGCCTCTTCTTGGCTATGTCTGTCCTCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| CDS CCA 90 bp | GATGCCTGGCCTCCTGCAGGGAACTGGTTCATCTGGCTGGCTCTGTaGTTGCCTATAGGGCTCAAGCCCAGCACACCCCTGGGGACCACG | + |
|
Preference number: 5 (lower is better) Translates to: DAWPPAGNWFIWLAL*LPIGLKPSTPLGTT Trigger: CGTGGTCCCCAGGGGTGTGCTGGGCTTGAGCCCTATAGGCAACCACAGAGCCAGCCAGATGAACCAGTTCCCTGCAGGAGGCCAGGCATC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
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| CDS-3UTR CAA 90 bp | GGACGCCGGCAGCTTTCCGGGCGGTCTGAGATGAGCTTGTCCAACTCCTCAGGGTGGCTGGCTCTGTGGTaGCCTATAGGGCTCAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GRRQLSGRSEMSLSNSSGWLALW*PIGLKP Trigger: GGGCTTGAGCCCTATAGGCAACCACAGAGCCAGCCA...CCCTGAGGAGTTGGACAAGCTCATCTCAGACCGCCCGGAAAGCTGCCGGCGTCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
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| CDS GCA 90 bp | TGTGTCACACCTGAACTGCCCAGGTCTATCCGCCCATTTGCCATCTaGTGCAGTCGAGGCACGTCCACGGCCGTGAGCCAGGACAGCGAC | + |
|
Preference number: 5 (lower is better) Translates to: CVTPELPRSIRPFAI*CSRGTSTAVSQDSD Trigger: GTCGCTGTCCTGGCTCACGGCCGTGGACGTGCCTCGACTGCAGCAGATGGCAAATGGGCGGATAGACCTGGGCAGTTCAGGTGTGACACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044790.12 ENSMUST00000129530.8 |
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| CDS-3UTR CAA 90 bp | GACCTCACGCTGCCCTTACAGATGGCTGGCCTGCCTGCTGGGTCTTCTGAACAAGCGCTGGCTCTGTGGTaGCCTATAGGGCTCAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: DLTLPLQMAGLPAGSSEQALALW*PIGLKP Trigger: GGGCTTGAGCCCTATAGGCAACCACAGAGCCAGCGC...TTGTTCAGAAGACCCAGCAGGCAGGCCAGCCATCTGTAAGGGCAGCGTGAGGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| CDS TCA 90 bp | GTCTGCTGTCCCAGCCAAGGCACCTGGGTGTGGATGTGTCACACCTaGACTGCCCAGGTCTATCCGCCCATTTGCCATCTGCTGCAGTCG | + |
|
Preference number: 5 (lower is better) Translates to: VCCPSQGTWVWMCHT*TAQVYPPICHLLQS Trigger: CGACTGCAGCAGATGGCAAATGGGCGGATAGACCTGGGCAGTTCAGGTGTGACACATCCACACCCAGGTGCCTTGGCTGGGACAGCAGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044790.12 ENSMUST00000129530.8 |
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| CDS TCA 90 bp | TTGGGTAGCTGGGGAGTACAGCTGTGGCATTTCCTGGAGGCCCGATaGTGCCTGGCCTCCTGCAGGGAACTGGTTCATCTGCTCAGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: LGSWGVQLWHFLEAR*CLASCRELVHLLSA Trigger: AGCGCTGAGCAGATGAACCAGTTCCCTGCAGGAGGCCAGGCATCATCGGGCCTCCAGGAAATGCCACAGCTGTACTCCCCAGCTACCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044790.12 ENSMUST00000144050.2 |
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| CDS TCA 90 bp | TTGGGTAGCTGGGGAGTACAGCTGTGGCATTTCCTGGAGGCCCGATaGTGCCTGGCCTCCTGCAGGGAACTGGTTCATCTGGCTGGCTCT | + |
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Preference number: 5 (lower is better) Translates to: LGSWGVQLWHFLEAR*CLASCRELVHLAGS Trigger: AGAGCCAGCCAGATGAACCAGTTCCCTGCAGGAGGCCAGGCATCATCGGGCCTCCAGGAAATGCCACAGCTGTACTCCCCAGCTACCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
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| CDS GCA 90 bp | CTGTCCCAGCCAAGGCACCTGGGTGTGGATGTGTCACACCTGAACTaGCCAGGTCTATCCGCCCATTTGCCATCTGCTGCAGTCGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LSQPRHLGVDVSHLN*PGLSAHLPSAAVEA Trigger: TGCCTCGACTGCAGCAGATGGCAAATGGGCGGATAGACCTGGGCAGTTCAGGTGTGACACATCCACACCCAGGTGCCTTGGCTGGGACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044790.12 ENSMUST00000129530.8 |
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| CDS CCA 90 bp | TGGCGATCAGACAGCTGTAGGAGTAGATGGGCTTGGGGTAGTGTTTaGGGTGTGGCTCCTGAGACGCATGCATTGCCCCGTGGGCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: WRSDSCRSRWAWGSV*GVAPETHALPRGPV Trigger: CACAGGCCCACGGGGCAATGCATGCGTCTCAGGAGCCACACCCCAAACACTACCCCAAGCCCATCTACTCCTACAGCTGTCTGATCGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| CDS-3UTR CAA 90 bp | CTGATGACAAGACCTCACGCTGCCCTTACAGATGGCTGGCCTGCCTGCTGGGTCGAGGAGCCGCTGGACTaGGTTTCCACCTTCTCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LMTRPHAALTDGWPACWVEEPLD*VSTFSK Trigger: CTTCGAGAAGGTGGAAACCAAGTCCAGCGGCTCCTC...GACCCAGCAGGCAGGCCAGCCATCTGTAAGGGCAGCGTGAGGTCTTGTCATCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| CDS GCA 90 bp | AGCTGCCTGTTTTGCTGTTCTTCAAGGCCATGGCGATCAGACAGCTaGTGGGACCCCAGAGGCAGAGGGAACGGGATTTGGGTAGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SCLFCCSSRPWRSDS*WDPRGRGNGIWVAG Trigger: CCCAGCTACCCAAATCCCGTTCCCTCTGCCTCTGGGGTCCCAGCAGCTGTCTGATCGCCATGGCCTTGAAGAACAGCAAAACAGGCAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
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| CDS-3UTR CAA 90 bp | GGAGCTGGTGGTGCAGAGGCACTGACTGCAGGGACAGGGTCATCAGTGGCTTTGGGCAAGCTGCCTGTTTaGCTGTTCTTCAAGGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: GAGGAEALTAGTGSSVALGKLPV*LFFKAM Trigger: CATGGCCTTGAAGAACAGCAAAACAGGCAGCTTGCC...CAAAGCCACTGATGACCCTGTCCCTGCAGTCAGTGCCTCTGCACCACCAGCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
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| CDS-3UTR CAA 90 bp | CTGTGTCCCAAGGTGGGCTCTGCCAGGAGTCAGGCTATTAAGAGCCGGGTCTCAATCTCCTCCTCCATCTaGTCGATGCGAGCCAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LCPKVGSARSQAIKSRVSISSSI*SMRARF Trigger: GAACCTGGCTCGCATCGACAAGATGGAGGAGGAGAT...TGAGACCCGGCTCTTAATAGCCTGACTCCTGGCAGAGCCCACCTTGGGACACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| CDS-3UTR CAA 90 bp | CAGGGCCTTTCTCCAGCTGTAGGCCATGCTCTGAGGCATAGTCAGAGGTTCCTCTCCAACTCCTCAGGGTaGGCCATGCTGCGGTGTATG | + |
|
Preference number: 5 (lower is better) Translates to: QGLSPAVGHALRHSQRFLSNSSG*AMLRCM Trigger: CATACACCGCAGCATGGCCAACCCTGAGGAGTTGGA...GAGGAACCTCTGACTATGCCTCAGAGCATGGCCTACAGCTGGAGAAAGGCCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| CDS-3UTR CAA 90 bp | AAGAGCCGGGTCTCACCATGGCCATGCCTCTGTCTCAAGTCCTGCAGAAGATGGCGGTCTGAGATGAGCTaGTCCAACTCCTCAGGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: KSRVSPWPCLCLKSCRRWRSEMS*SNSSGL Trigger: CAACCCTGAGGAGTTGGACAAGCTCATCTCAGACCG...CCATCTTCTGCAGGACTTGAGACAGAGGCATGGCCATGGTGAGACCCGGCTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| CDS-3UTR CAA 90 bp | GGAGTGTCCTGTGGCAGCATGTTGGGGTGCAGGAGGAACCACAAGCTGTCATTTAAGGACTGGTCACTGTaGCCAGAGACAGGGGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GVSCGSMLGCRRNHKLSFKDWSL*PETGVR Trigger: CCTGACCCCTGTCTCTGGCAACAGTGACCAGTCCTT...AAATGACAGCTTGTGGTTCCTCCTGCACCCCAACATGCTGCCACAGGACACTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| CDS CCA 90 bp | TCGTCACCCACGGGAGGCAGAAACCTGTATTCCTGTGGAGAGCAGTaGTGGCTGTGCCCCGAGCTTCTGATCATTTCTGACATTCTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: SSPTGGRNLYSCGEQ*WLCPELLIISDILD Trigger: GTCCAGAATGTCAGAAATGATCAGAAGCTCGGGGCACAGCCACCACTGCTCTCCACAGGAATACAGGTTTCTGCCTCCCGTGGGTGACGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| CDS-3UTR CAA 90 bp | CTGATGACAAGACCTCACGCTGCCCTTACAGATGGCTGGCCTGCCTGCTGGGTCGTGTTCATGTCACTGTaGATGTTGAGGAAGTCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LMTRPHAALTDGWPACWVVFMSL*MLRKSP Trigger: TGGGGACTTCCTCAACATCAACAGTGACATGAACAC...GACCCAGCAGGCAGGCCAGCCATCTGTAAGGGCAGCGTGAGGTCTTGTCATCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| CDS-3UTR CAA 90 bp | CAGGGCCTTTCTCCAGCTGTAGGCCATGCTCTGAGGCATAGTCAGAGGTTCCTCTCCTTTCGTTTCCACTaGTGCATCTCCTCCTCCATC | + |
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Preference number: 5 (lower is better) Translates to: QGLSPAVGHALRHSQRFLSFRFH*CISSSI Trigger: GATGGAGGAGGAGATGCACAAGTGGAAACGAAAGGA...GAGGAACCTCTGACTATGCCTCAGAGCATGGCCTACAGCTGGAGAAAGGCCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| CDS GCA 90 bp | ACGGGAGGCAGAAACCTGTATTCCTGTGGAGAGCAGTGGTGGCTGTaGCCCGAGCTTCTGATCATTTCTGACATTCTGGACCAAATGCCA | + |
|
Preference number: 5 (lower is better) Translates to: TGGRNLYSCGEQWWL*PELLIISDILDQMP Trigger: TGGCATTTGGTCCAGAATGTCAGAAATGATCAGAAGCTCGGGGCACAGCCACCACTGCTCTCCACAGGAATACAGGTTTCTGCCTCCCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| CDS-3UTR CAA 90 bp | GGTTCCTCTCCTAGGAGAATGTGTGTGCTCAGAGTTTCCCCTCCTGTGTCTCCATTGTTCAGGGACAGGTaGTGCCTCACGGAGTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GSSPRRMCVLRVSPPVSPLFRDR*CLTEFF Trigger: GAAGAACTCCGTGAGGCACAACCTGTCCCTGAACAA...TGGAGACACAGGAGGGGAAACTCTGAGCACACACATTCTCCTAGGAGAGGAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| CDS-3UTR CAA 90 bp | GGTTCCTCTCCTAGGAGAATGTGTGTGCTCAGAGTTTCCCCTCCTGTGTCTCCAATGTCACTGTTGATGTaGAGGAAGTCCCCAGGAACC | + |
|
Preference number: 5 (lower is better) Translates to: GSSPRRMCVLRVSPPVSPMSLLM*RKSPGT Trigger: GGTTCCTGGGGACTTCCTCAACATCAACAGTGACAT...TGGAGACACAGGAGGGGAAACTCTGAGCACACACATTCTCCTAGGAGAGGAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| CDS-3UTR CAA 90 bp | GTTGTGAACTCTCAGGCATGGGGTCAGACATCAAGATGGAAAAGAGCAGGTGGAGGCAAGCTGCCTGTTTaGCTGTTCTTCAAGGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: VVNSQAWGQTSRWKRAGGGKLPV*LFFKAM Trigger: CATGGCCTTGAAGAACAGCAAAACAGGCAGCTTGCC...TCCACCTGCTCTTTTCCATCTTGATGTCTGACCCCATGCCTGAGAGTTCACAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| CDS TCA 72 bp | CGAGGCACGTCCACGGCCGTGAGCCAGGACAGCGACTaGAGGTCCCCAGGGAGGTCGTCGTCACCCACGGGA | + |
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Preference number: 6 (lower is better) Translates to: RGTSTAVSQDSD*RSPGRSSSPTG Trigger: TCCCGTGGGTGACGACGACCTCCCTGGGGACCTTCAGTCGCTGTCCTGGCTCACGGCCGTGGACGTGCCTCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| CDS TCA 72 bp | CCCTGGTGTACCCAGGTACTGCGCAGAGTTGGCCGCTaGTGGGGCCACACCGTCTGCGGCAGTGGAGTAGGC | + |
|
Preference number: 6 (lower is better) Translates to: PWCTQVLRRVGR*WGHTVCGSGVG Trigger: GCCTACTCCACTGCCGCAGACGGTGTGGCCCCATCAGCGGCCAACTCTGCGCAGTACCTGGGTACACCAGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| CDS CCA 72 bp | GCTTGTTCCCTGGTGTACCCAGGTACTGCGCAGAGTTaGCCGCTGATGGGGCCACACCGTCTGCGGCAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: ACSLVYPGTAQS*PLMGPHRLRQW Trigger: CCACTGCCGCAGACGGTGTGGCCCCATCAGCGGCCAACTCTGCGCAGTACCTGGGTACACCAGGGAACAAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| CDS CAA 72 bp | GGTAGTGTTTGGGGTGTGGCTCCTGAGACGCATGCATaGCCCCGTGGGCCTGTGGGTAGGAAGGCCGAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: GSVWGVAPETHA*PRGPVGRKAEP Trigger: CGGCTCGGCCTTCCTACCCACAGGCCCACGGGGCAATGCATGCGTCTCAGGAGCCACACCCCAAACACTACC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044790.12 ENSMUST00000144050.2 |
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| CDS CAA 72 bp | GGCTTGTTCCCTGGTGTACCCAGGTACTGCGCAGAGTaGGCCGCTGATGGGGCCACACCGTCTGCGGCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: GLFPGVPRYCAE*AADGATPSAAV Trigger: CACTGCCGCAGACGGTGTGGCCCCATCAGCGGCCAACTCTGCGCAGTACCTGGGTACACCAGGGAACAAGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| CDS GCA 72 bp | GAACTGCCCAGGTCTATCCGCCCATTTGCCATCTGCTaGAGTCGAGGCACGTCCACGGCCGTGAGCCAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: ELPRSIRPFAIC*SRGTSTAVSQD Trigger: GTCCTGGCTCACGGCCGTGGACGTGCCTCGACTGCAGCAGATGGCAAATGGGCGGATAGACCTGGGCAGTTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044790.12 ENSMUST00000129530.8 |
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| CDS GCA 72 bp | CCTGAACTGCCCAGGTCTATCCGCCCATTTGCCATCTaGTGCAGTCGAGGCACGTCCACGGCCGTGAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: PELPRSIRPFAI*CSRGTSTAVSQ Trigger: CTGGCTCACGGCCGTGGACGTGCCTCGACTGCAGCAGATGGCAAATGGGCGGATAGACCTGGGCAGTTCAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044790.12 ENSMUST00000129530.8 |
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| CDS CCA 72 bp | TGGAGGCCCGATGATGCCTGGCCTCCTGCAGGGAACTaGTTCATCTGCTCAGCGCTGGCTCTGTGGTTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: WRPDDAWPPAGN*FICSALALWLP Trigger: AGGCAACCACAGAGCCAGCGCTGAGCAGATGAACCAGTTCCCTGCAGGAGGCCAGGCATCATCGGGCCTCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044790.12 ENSMUST00000144050.2 |
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| CDS CCA 72 bp | GGACCCCAGAGGCAGAGGGAACGGGATTTGGGTAGCTaGGGAGTACAGCTGTGGCATTTCCTGGAGGCCCGA | + |
|
Preference number: 6 (lower is better) Translates to: GPQRQRERDLGS*GVQLWHFLEAR Trigger: TCGGGCCTCCAGGAAATGCCACAGCTGTACTCCCCAGCTACCCAAATCCCGTTCCCTCTGCCTCTGGGGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044790.12 ENSMUST00000129530.8 ENSMUST00000144050.2 |
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| CDS CAA 72 bp | GTGTCACACCTGAACTGCCCAGGTCTATCCGCCCATTaGCCATCTGCTGCAGTCGAGGCACGTCCACGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: VSHLNCPGLSAH*PSAAVEARPRP Trigger: CGGCCGTGGACGTGCCTCGACTGCAGCAGATGGCAAATGGGCGGATAGACCTGGGCAGTTCAGGTGTGACAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044790.12 ENSMUST00000129530.8 |
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| CDS CCA 72 bp | GCAGGGAACTGGTTCATCTGCTCAGCGCTGGCTCTGTaGTTGCCTATAGGGCTCAAGCCCAGCACACCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: AGNWFICSALAL*LPIGLKPSTPL Trigger: CAGGGGTGTGCTGGGCTTGAGCCCTATAGGCAACCACAGAGCCAGCGCTGAGCAGATGAACCAGTTCCCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044790.12 ENSMUST00000144050.2 |
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| CDS CCA 72 bp | CACTGCTGGGACCCCAGAGGCAGAGGGAACGGGATTTaGGTAGCTGGGGAGTACAGCTGTGGCATTTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: HCWDPRGRGNGI*VAGEYSCGISW Trigger: CCAGGAAATGCCACAGCTGTACTCCCCAGCTACCCAAATCCCGTTCCCTCTGCCTCTGGGGTCCCAGCAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044790.12 ENSMUST00000144050.2 |
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| CDS CCA 72 bp | TGGAGGCCCGATGATGCCTGGCCTCCTGCAGGGAACTaGTTCATCTGGCTGGCTCTGTGGTTGCCTATAGGG | + |
|
Preference number: 6 (lower is better) Translates to: WRPDDAWPPAGN*FIWLALWLPIG Trigger: CCCTATAGGCAACCACAGAGCCAGCCAGATGAACCAGTTCCCTGCAGGAGGCCAGGCATCATCGGGCCTCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
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| CDS CCA 72 bp | AGCTGCTGGGACCCCAGAGGCAGAGGGAACGGGATTTaGGTAGCTGGGGAGTACAGCTGTGGCATTTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SCWDPRGRGNGI*VAGEYSCGISW Trigger: CCAGGAAATGCCACAGCTGTACTCCCCAGCTACCCAAATCCCGTTCCCTCTGCCTCTGGGGTCCCAGCAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
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| CDS CAA 72 bp | GCACTGCTGGGACCCCAGAGGCAGAGGGAACGGGATTaGGGTAGCTGGGGAGTACAGCTGTGGCATTTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: ALLGPQRQRERD*GSWGVQLWHFL Trigger: CAGGAAATGCCACAGCTGTACTCCCCAGCTACCCAAATCCCGTTCCCTCTGCCTCTGGGGTCCCAGCAGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044790.12 ENSMUST00000144050.2 |
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| CDS CAA 72 bp | CAGCTGCTGGGACCCCAGAGGCAGAGGGAACGGGATTaGGGTAGCTGGGGAGTACAGCTGTGGCATTTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: QLLGPQRQRERD*GSWGVQLWHFL Trigger: CAGGAAATGCCACAGCTGTACTCCCCAGCTACCCAAATCCCGTTCCCTCTGCCTCTGGGGTCCCAGCAGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
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| CDS TCA 72 bp | TGGGGAGTACAGCTGTGGCATTTCCTGGAGGCCCGATaGTGCCTGGCCTCCTGCAGGGAACTGGTTCATCTG | + |
|
Preference number: 6 (lower is better) Translates to: WGVQLWHFLEAR*CLASCRELVHL Trigger: CAGATGAACCAGTTCCCTGCAGGAGGCCAGGCATCATCGGGCCTCCAGGAAATGCCACAGCTGTACTCCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044790.12 ENSMUST00000129530.8 ENSMUST00000144050.2 |
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| CDS GCA 72 bp | GATGATGCCTGGCCTCCTGCAGGGAACTGGTTCATCTaGTCAGCGCTGGCTCTGTGGTTGCCTATAGGGCTC | + |
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Preference number: 6 (lower is better) Translates to: DDAWPPAGNWFI*SALALWLPIGL Trigger: GAGCCCTATAGGCAACCACAGAGCCAGCGCTGAGCAGATGAACCAGTTCCCTGCAGGAGGCCAGGCATCATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044790.12 ENSMUST00000144050.2 |
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| CDS CCA 72 bp | GTCGTCACCCACGGGAGGCAGAAACCTGTATTCCTGTaGAGAGCAGTGGTGGCTGTGCCCCGAGCTTCTGAT | + |
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Preference number: 6 (lower is better) Translates to: VVTHGRQKPVFL*RAVVAVPRASD Trigger: ATCAGAAGCTCGGGGCACAGCCACCACTGCTCTCCACAGGAATACAGGTTTCTGCCTCCCGTGGGTGACGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| CDS CCA 72 bp | ATTTGGGTAGCTGGGGAGTACAGCTGTGGCATTTCCTaGAGGCCCGATGATGCCTGGCCTCCTGCAGGGAAC | + |
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Preference number: 6 (lower is better) Translates to: IWVAGEYSCGIS*RPDDAWPPAGN Trigger: GTTCCCTGCAGGAGGCCAGGCATCATCGGGCCTCCAGGAAATGCCACAGCTGTACTCCCCAGCTACCCAAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044790.12 ENSMUST00000129530.8 ENSMUST00000144050.2 |
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| CDS CCA 72 bp | GATGATGCCTGGCCTCCTGCAGGGAACTGGTTCATCTaGCTGGCTCTGTGGTTGCCTATAGGGCTCAAGCCC | + |
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Preference number: 6 (lower is better) Translates to: DDAWPPAGNWFI*LALWLPIGLKP Trigger: GGGCTTGAGCCCTATAGGCAACCACAGAGCCAGCCAGATGAACCAGTTCCCTGCAGGAGGCCAGGCATCATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
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| CDS GCA 72 bp | CCAAGGCACCTGGGTGTGGATGTGTCACACCTGAACTaGCCAGGTCTATCCGCCCATTTGCCATCTGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: PRHLGVDVSHLN*PGLSAHLPSAA Trigger: TGCAGCAGATGGCAAATGGGCGGATAGACCTGGGCAGTTCAGGTGTGACACATCCACACCCAGGTGCCTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044790.12 ENSMUST00000129530.8 |
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| CDS CCA 72 bp | GACAGCTGTAGGAGTAGATGGGCTTGGGGTAGTGTTTaGGGTGTGGCTCCTGAGACGCATGCATTGCCCCGT | + |
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Preference number: 6 (lower is better) Translates to: DSCRSRWAWGSV*GVAPETHALPR Trigger: ACGGGGCAATGCATGCGTCTCAGGAGCCACACCCCAAACACTACCCCAAGCCCATCTACTCCTACAGCTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| CDS GCA 72 bp | TTTTGCTGTTCTTCAAGGCCATGGCGATCAGACAGCTaGTGGGACCCCAGAGGCAGAGGGAACGGGATTTGG | + |
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Preference number: 6 (lower is better) Translates to: FCCSSRPWRSDS*WDPRGRGNGIW Trigger: CCAAATCCCGTTCCCTCTGCCTCTGGGGTCCCAGCAGCTGTCTGATCGCCATGGCCTTGAAGAACAGCAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129530.8 |
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| CDS CCA 72 bp | ACGGGAGGCAGAAACCTGTATTCCTGTGGAGAGCAGTaGTGGCTGTGCCCCGAGCTTCTGATCATTTCTGAC | + |
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Preference number: 6 (lower is better) Translates to: TGGRNLYSCGEQ*WLCPELLIISD Trigger: GTCAGAAATGATCAGAAGCTCGGGGCACAGCCACCACTGCTCTCCACAGGAATACAGGTTTCTGCCTCCCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| CDS GCA 72 bp | AGCTGTAGATCTCACTCACGGGCAAGCTGCCTGTTTTaGTGTTCTTCAAGGCCATGGCGATCAGACAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: SCRSHSRASCLF*CSSRPWRSDSC Trigger: ACAGCTGTCTGATCGCCATGGCCTTGAAGAACAGCAAAACAGGCAGCTTGCCCGTGAGTGAGATCTACAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| CDS CCA 72 bp | GGAGGCAGAAACCTGTATTCCTGTGGAGAGCAGTGGTaGCTGTGCCCCGAGCTTCTGATCATTTCTGACATT | + |
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Preference number: 6 (lower is better) Translates to: GGRNLYSCGEQW*LCPELLIISDI Trigger: AATGTCAGAAATGATCAGAAGCTCGGGGCACAGCCACCACTGCTCTCCACAGGAATACAGGTTTCTGCCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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| CDS GCA 72 bp | AGAAACCTGTATTCCTGTGGAGAGCAGTGGTGGCTGTaGCCCGAGCTTCTGATCATTTCTGACATTCTGGAC | + |
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Preference number: 6 (lower is better) Translates to: RNLYSCGEQWWL*PELLIISDILD Trigger: GTCCAGAATGTCAGAAATGATCAGAAGCTCGGGGCACAGCCACCACTGCTCTCCACAGGAATACAGGTTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044790.12 |
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