Pregenerated sensors for FOXN3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033713Ensembl transcript IDs: ENSMUST00000046859.12, ENSMUST00000085108.8, ENSMUST00000177451.8, ENSMUST00000222458.2
Found 175 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCTTGCCACACAGCAAGGCCGATGGCATTTGTGGTACCTTGGGATaGCAGGGCCAGAGCATGGGGTTATCCTCTAGGGGACAAGGGCTC | + |
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Preference number: 1 (lower is better) Translates to: GLPHSKADGICGTLG*QGQSMGLSSRGQGL Trigger: GAGCCCTTGTCCCCTAGAGGATAACCCCATGCTCTGGCCCTGGCATCCCAAGGTACCACAAATGCCATCGGCCTTGCTGTGTGGCAAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
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| 3UTR GCA 90 bp | CTCAAGGCTAAGAAACACAGAGGACTGGCAGCCAGGCCCTGGGCTTaGCACACAGCAAGGCCGATGGCATTTGTGGTACCTTGGGATGCC | + |
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Preference number: 1 (lower is better) Translates to: LKAKKHRGLAARPWA*HTARPMAFVVPWDA Trigger: GGCATCCCAAGGTACCACAAATGCCATCGGCCTTGCTGTGTGGCAAGCCCAGGGCCTGGCTGCCAGTCCTCTGTGTTTCTTAGCCTTGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
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| 3UTR GCA 90 bp | GTGGATGGCTTGTTGGGTGCCAGAGGTTTGTGGAGAACACACCCGTaGTCTCATCTAACCCCGAACCCTCACGCTGAGAGAGCCCAGGCT | + |
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Preference number: 1 (lower is better) Translates to: VDGLLGARGLWRTHP*SHLTPNPHAERAQA Trigger: AGCCTGGGCTCTCTCAGCGTGAGGGTTCGGGGTTAGATGAGAGCACGGGTGTGTTCTCCACAAACCTCTGGCACCCAACAAGCCATCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
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| 3UTR CCA 90 bp | GAAAGGGCGCCAACCCATCCCTCCTTGAAAGACGTGGCCCCAAGATaGAGACCTGCCCCAGTCATCCTGACCACGAGTTCCTTATGCCAC | + |
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Preference number: 1 (lower is better) Translates to: ERAPTHPSLKDVAPR*RPAPVILTTSSLCH Trigger: GTGGCATAAGGAACTCGTGGTCAGGATGACTGGGGCAGGTCTCCATCTTGGGGCCACGTCTTTCAAGGAGGGATGGGTTGGCGCCCTTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
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| 3UTR CCA 90 bp | AGCCCAAATTGGTGGCTTGGGACATTGCACATGGGCCTGCTGTGTTaGGACTGTAAGCACCAAAACCACCCCATCTGTGGCTCGGGCGCC | + |
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Preference number: 1 (lower is better) Translates to: SPNWWLGTLHMGLLC*DCKHQNHPICGSGA Trigger: GGCGCCCGAGCCACAGATGGGGTGGTTTTGGTGCTTACAGTCCCAACACAGCAGGCCCATGTGCAATGTCCCAAGCCACCAATTTGGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
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| 3UTR TCA 90 bp | GTAGAACGCTCGCTCGCTCGCTCGGGGCTGCTCCATCCAACCCCTTaGTGGCGTACTTCCTCCAACCCATGTACCCATTTCTTACCCTCA | + |
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Preference number: 1 (lower is better) Translates to: VERSLARSGLLHPTP*WRTSSNPCTHFLPS Trigger: TGAGGGTAAGAAATGGGTACATGGGTTGGAGGAAGTACGCCATCAAGGGGTTGGATGGAGCAGCCCCGAGCGAGCGAGCGAGCGTTCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
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| 3UTR CCA 90 bp | CACTATCTAGGTGGTCTTAGTCCCAAGGTGGTTACTGTGCCGAAGTaGCAGAGATGGCCAGCCCCCTCCTCACTGCGCAATCACACTGTC | + |
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Preference number: 1 (lower is better) Translates to: HYLGGLSPKVVTVPK*QRWPAPSSLRNHTV Trigger: GACAGTGTGATTGCGCAGTGAGGAGGGGGCTGGCCATCTCTGCCACTTCGGCACAGTAACCACCTTGGGACTAAGACCACCTAGATAGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
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| 3UTR CCA 90 bp | AAGTTGACAGCAGAAACCAAAGCGTGGCTCAGGGTTCCAGAGCTGTaGATGGCTTGTTGGGTGCCAGAGGTTTGTGGAGAACACACCCGT | + |
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Preference number: 1 (lower is better) Translates to: KLTAETKAWLRVPEL*MACWVPEVCGEHTR Trigger: ACGGGTGTGTTCTCCACAAACCTCTGGCACCCAACAAGCCATCCACAGCTCTGGAACCCTGAGCCACGCTTTGGTTTCTGCTGTCAACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
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| 3UTR TCA 90 bp | CGTGTGGGGTTTGCATCGGAAGAAGCCCCCTGCCACAAACAGTGCTaGGTGCTTACCTTTACCTTCAGGTCTGAGTTTGAACATCTTGGG | + |
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Preference number: 1 (lower is better) Translates to: RVGFASEEAPCHKQC*VLTFTFRSEFEHLG Trigger: CCCAAGATGTTCAAACTCAGACCTGAAGGTAAAGGTAAGCACTCAGCACTGTTTGTGGCAGGGGGCTTCTTCCGATGCAAACCCCACACG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
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| 3UTR GCA 90 bp | ATCGATAAAGCCCAAATTGGTGGCTTGGGACATTGCACATGGGCCTaGTGTGTTGGGACTGTAAGCACCAAAACCACCCCATCTGTGGCT | + |
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Preference number: 1 (lower is better) Translates to: IDKAQIGGLGHCTWA*CVGTVSTKTTPSVA Trigger: AGCCACAGATGGGGTGGTTTTGGTGCTTACAGTCCCAACACAGCAGGCCCATGTGCAATGTCCCAAGCCACCAATTTGGGCTTTATCGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
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| 3UTR TCA 90 bp | GAAAAGAGAGTGAGTCTCTCTCTTCTCTTAACTGTGTCTGAGGGCTaGCAGCCGGCAGTTGTTATGTCGCGGTGCTATGTGTCCCCAAAG | + |
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Preference number: 1 (lower is better) Translates to: EKRVSLSLLLTVSEG*QPAVVMSRCYVSPK Trigger: CTTTGGGGACACATAGCACCGCGACATAACAACTGCCGGCTGTCAGCCCTCAGACACAGTTAAGAGAAGAGAGAGACTCACTCTCTTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
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| 3UTR CCA 90 bp | TTTTTGGCAAAGGTAACTGGAGTTTCTGGCTTGTGTGACATGGTCTaGTTGTTGTTCAGCTCTCACTATCTAGGTGGTCTTAGTCCCAAG | + |
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Preference number: 1 (lower is better) Translates to: FLAKVTGVSGLCDMV*LLFSSHYLGGLSPK Trigger: CTTGGGACTAAGACCACCTAGATAGTGAGAGCTGAACAACAACCAGACCATGTCACACAAGCCAGAAACTCCAGTTACCTTTGCCAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
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| 3UTR CCA 90 bp | TTTCTTAACAGCTACTGTCATTTCTTGGGCATGATTGCTTTTCCTTaGGCAGTTAAGAGGGCACAGCCTATTTTCTGCATCACCTTTAAG | + |
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Preference number: 1 (lower is better) Translates to: FLNSYCHFLGMIAFP*AVKRAQPIFCITFK Trigger: CTTAAAGGTGATGCAGAAAATAGGCTGTGCCCTCTTAACTGCCCAAGGAAAAGCAATCATGCCCAAGAAATGACAGTAGCTGTTAAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
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| 3UTR CCA 90 bp | TTTTCTTCAAAGGAATCCATGCATTTGTGGATCAGAAATTTCTGCTaGCTACACTGGCTGAATGTGAAAGTCACTGATCTGTTCTGTTTT | + |
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Preference number: 1 (lower is better) Translates to: FSSKESMHLWIRNFC*LHWLNVKVTDLFCF Trigger: AAAACAGAACAGATCAGTGACTTTCACATTCAGCCAGTGTAGCCAGCAGAAATTTCTGATCCACAAATGCATGGATTCCTTTGAAGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
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| 3UTR-3UTR CCA 90 bp | CTCCTCACTGCGCAATCACACTGTCACAGTAGAACGCTCGCTCGCTCGCTCGGGCTGGCAGCCAGGCCCTaGGCTTGCCACACAGCAAGG | + |
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Preference number: 2 (lower is better) Translates to: LLTAQSHCHSRTLARSLGLAARP*ACHTAR Trigger: CCTTGCTGTGTGGCAAGCCCAGGGCCTGGCTGCCAG...CCCGAGCGAGCGAGCGAGCGTTCTACTGTGACAGTGTGATTGCGCAGTGAGGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
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| 3UTR-3UTR CCA 90 bp | GGGCATCCTTGCCTTCCTTCGGGCTGGGTTTCCGGTCCTCCTCCTCTGGTTCACATCGCCACTGACCACTaGGGAGCCACATGGGGGCTC | + |
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Preference number: 2 (lower is better) Translates to: GHPCLPSGWVSGPPPLVHIATDH*GATWGL Trigger: GAGCCCCCATGTGGCTCCCCAGTGGTCAGTGGCGAT...GTGAACCAGAGGAGGAGGACCGGAAACCCAGCCCGAAGGAAGGCAAGGATGCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222458.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCATCCTTGCCTTCCTTCGGGCTGGGTTTCCGGTCCTCCTCCTCTGGTTCACAGATGGAGTCGCTGGTaGGAGAGGTGCTCCGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: GHPCLPSGWVSGPPPLVHRWSRW*ERCSGQ Trigger: CTGCCCGGAGCACCTCTCCCACCAGCGACTCCATCT...GTGAACCAGAGGAGGAGGACCGGAAACCCAGCCCGAAGGAAGGCAAGGATGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222458.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCATCCTTGCCTTCCTTCGGGCTGGGTTTCCGGTCCTCCTCCTCTGGTTCACAGGAGATGGAGTCGCTaGTGGGAGAGGTGCTCCGGG | + |
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Preference number: 2 (lower is better) Translates to: GHPCLPSGWVSGPPPLVHRRWSR*WERCSG Trigger: CCCGGAGCACCTCTCCCACCAGCGACTCCATCTCCT...GTGAACCAGAGGAGGAGGACCGGAAACCCAGCCCGAAGGAAGGCAAGGATGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222458.2 |
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| 3UTR-3UTR TCA 90 bp | CTCCTCACTGCGCAATCACACTGTCACAGTAGAACGCTCGCTCGCTCGCTCGGGAGAGGGGGTCGGGGCTaGGTGCAGACAAGGCAGTAC | + |
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Preference number: 2 (lower is better) Translates to: LLTAQSHCHSRTLARSLGRGGRG*VQTRQY Trigger: GTACTGCCTTGTCTGCACTCAGCCCCGACCCCCTCT...CCCGAGCGAGCGAGCGAGCGTTCTACTGTGACAGTGTGATTGCGCAGTGAGGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
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| 3UTR-3UTR GCA 90 bp | AAGTGGCTGCCGCCGTTGCCATGGTACCTGGTACTGACAGGTGGACACAGCTTTGCCAGGCCCTGGGCTTaGCACACAGCAAGGCCGATG | + |
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Preference number: 2 (lower is better) Translates to: KWLPPLPWYLVLTGGHSFARPWA*HTARPM Trigger: CATCGGCCTTGCTGTGTGGCAAGCCCAGGGCCTGGC...AAAGCTGTGTCCACCTGTCAGTACCAGGTACCATGGCAACGGCGGCAGCCACTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
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| 3UTR-3UTR TCA 90 bp | GGGCATCCTTGCCTTCCTTCGGGCTGGGTTTCCGGTCCTCCTCCTCTGGTTCACATAGTGGTCGTCGGCTaGGGAGGAGGAAGAGGAGAT | + |
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Preference number: 2 (lower is better) Translates to: GHPCLPSGWVSGPPPLVHIVVVG*GGGRGD Trigger: ATCTCCTCTTCCTCCTCCTCAGCCGACGACCACTAT...GTGAACCAGAGGAGGAGGACCGGAAACCCAGCCCGAAGGAAGGCAAGGATGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222458.2 |
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| 3UTR-3UTR TCA 90 bp | TGCCAGGGCCAGAGCATGGGGTTATCCTCTAGGGGACAAGGGCTCTTCAGTCTCCTGAGCAGTGACGACTaGCTCTGTGTGCGTGTGTGC | + |
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Preference number: 2 (lower is better) Translates to: CQGQSMGLSSRGQGLFSLLSSDD*LCVRVC Trigger: GCACACACGCACACAGAGTCAGTCGTCACTGCTCAG...GAGACTGAAGAGCCCTTGTCCCCTAGAGGATAACCCCATGCTCTGGCCCTGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
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| 3UTR-3UTR TCA 90 bp | CAGCAAGTCAGAAATGGTCATTCCACAGCGGGCTCGTTCCGGAGGCTCGGCAGCTCTCTTAACTGTGTCTaGGGGCTGACAGCCGGCAGT | + |
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Preference number: 2 (lower is better) Translates to: QQVRNGHSTAGSFRRLGSSLNCV*GLTAGS Trigger: ACTGCCGGCTGTCAGCCCTCAGACACAGTTAAGAGA...GCTGCCGAGCCTCCGGAACGAGCCCGCTGTGGAATGACCATTTCTGACTTGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
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| 3UTR-3UTR GCA 90 bp | CAGCAAGTCAGAAATGGTCATTCCACAGCGGGCTCGTTCCGGAGGCTCGGCAGCGTGCCTCCTAGGTGGTaGTCCATGTTCCTGTGGCAT | + |
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Preference number: 2 (lower is better) Translates to: QQVRNGHSTAGSFRRLGSVPPRW*SMFLWH Trigger: ATGCCACAGGAACATGGAGCACCACCTAGGAGGCAC...GCTGCCGAGCCTCCGGAACGAGCCCGCTGTGGAATGACCATTTCTGACTTGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
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| 3UTR CAA 90 bp | AGTAGAACGCTCGCTCGCTCGCTCGGGGCTGCTCCATCCAACCCCTaGATGGCGTACTTCCTCCAACCCATGTACCCATTTCTTACCCTC | + |
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Preference number: 2 (lower is better) Translates to: SRTLARSLGAAPSNP*MAYFLQPMYPFLTL Trigger: GAGGGTAAGAAATGGGTACATGGGTTGGAGGAAGTACGCCATCAAGGGGTTGGATGGAGCAGCCCCGAGCGAGCGAGCGAGCGTTCTACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
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| 3UTR CAA 90 bp | CCAAAAGCTGCCCTCAGGTTAGGTAGGGGGAAGTGGCTGCCGCCGTaGCCATGGTACCTGGTACTGACAGGTGGACACAGCTTTAAAGGC | + |
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Preference number: 2 (lower is better) Translates to: PKAALRLGRGKWLPP*PWYLVLTGGHSFKG Trigger: GCCTTTAAAGCTGTGTCCACCTGTCAGTACCAGGTACCATGGCAACGGCGGCAGCCACTTCCCCCTACCTAACCTGAGGGCAGCTTTTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
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| 3UTR-3UTR CCA 90 bp | AGGAAAAACCCGCTCTTGGGAAAGGGCGCCAACCCATCCCTCCTTGAAAGACGTGGTGCCAGAGGTTTGTaGAGAACACACCCGTGCTCT | + |
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Preference number: 2 (lower is better) Translates to: RKNPLLGKGANPSLLERRGARGL*RTHPCS Trigger: AGAGCACGGGTGTGTTCTCCACAAACCTCTGGCACC...ACGTCTTTCAAGGAGGGATGGGTTGGCGCCCTTTCCCAAGAGCGGGTTTTTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
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| 3UTR-3UTR TCA 90 bp | GAGCAGAACTCAGTGGTTATCAATGGCTCTGACGATCCCTGTTTTCCCTCCTCAGGTTGGGCTGAGCAGTaGCGACTGACTCTGTGTGCG | + |
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Preference number: 2 (lower is better) Translates to: EQNSVVINGSDDPCFPSSGWAEQ*RLTLCA Trigger: CGCACACAGAGTCAGTCGTCACTGCTCAGCCCAACC...TGAGGAGGGAAAACAGGGATCGTCAGAGCCATTGATAACCACTGAGTTCTGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
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| 3UTR-3UTR GCA 90 bp | CCTTGGGCAGTTAAGAGGGCACAGCCTATTTTCTGCATCACCTTTAAGTTGTGTGCCAGGCCCTGGGCTTaGCACACAGCAAGGCCGATG | + |
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Preference number: 2 (lower is better) Translates to: PWAVKRAQPIFCITFKLCARPWA*HTARPM Trigger: CATCGGCCTTGCTGTGTGGCAAGCCCAGGGCCTGGC...ACACAACTTAAAGGTGATGCAGAAAATAGGCTGTGCCCTCTTAACTGCCCAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
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| 3UTR-3UTR GCA 90 bp | CCTCTGGTTCACTGTGGCTCTCATGGCTCTGGAAGCTTCCCTCACTGCCCTCCTTCCTGGAGAAAAACCTaGTTGTATCTCAGGGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: PLVHCGSHGSGSFPHCPPSWRKT*LYLRGR Trigger: TCTCCCCCTGAGATACAAGCAGGTTTTTCTCCAGGA...AGGAGGGCAGTGAGGGAAGCTTCCAGAGCCATGAGAGCCACAGTGAACCAGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000222458.2 |
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| 3UTR-3UTR CCA 90 bp | ATAAAGCCCAAATTGGTGGCTTGGGACATTGCACATGGGCCTGCTGTGTTGGGACTGCCGCCGTTGCCATaGTACCTGGTACTGACAGGT | + |
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Preference number: 2 (lower is better) Translates to: IKPKLVAWDIAHGPAVLGLPPLP*YLVLTG Trigger: ACCTGTCAGTACCAGGTACCATGGCAACGGCGGCAG...TCCCAACACAGCAGGCCCATGTGCAATGTCCCAAGCCACCAATTTGGGCTTTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
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| 3UTR CAA 90 bp | CCAAGGGACAGTACAGAGGTTGGAGTAGCATCGATAAAGCCCAAATaGGTGGCTTGGGACATTGCACATGGGCCTGCTGTGTTGGGACTG | + |
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Preference number: 2 (lower is better) Translates to: PRDSTEVGVASIKPK*VAWDIAHGPAVLGL Trigger: CAGTCCCAACACAGCAGGCCCATGTGCAATGTCCCAAGCCACCAATTTGGGCTTTATCGATGCTACTCCAACCTCTGTACTGTCCCTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
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| 3UTR-3UTR GCA 90 bp | ACATACACACACACACACACACAGGACCAACCTTCAGGCTTATGGCTTTGGAAGTGTGGTACCTTGGGATaGCAGGGCCAGAGCATGGGG | + |
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Preference number: 2 (lower is better) Translates to: TYTHTHTQDQPSGLWLWKCGTLG*QGQSMG Trigger: CCCCATGCTCTGGCCCTGGCATCCCAAGGTACCACA...CTTCCAAAGCCATAAGCCTGAAGGTTGGTCCTGTGTGTGTGTGTGTGTGTATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGCACAGCCTATTTTCTGCATCACCTTTAAGTTGTGTGTTTGTGTGCACATGCTGGCAGCCAGGCCCTaGGCTTGCCACACAGCAAGG | + |
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Preference number: 2 (lower is better) Translates to: RAQPIFCITFKLCVCVHMLAARP*ACHTAR Trigger: CCTTGCTGTGTGGCAAGCCCAGGGCCTGGCTGCCAG...CATGTGCACACAAACACACAACTTAAAGGTGATGCAGAAAATAGGCTGTGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
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| 3UTR CAA 90 bp | GGCAGTGAGAACGATGGAGTGAGGCTGGCTGAGCCAGCTATGACCTaGGATGGCTTCAACACACATACTCTAGAAATGGCGACTGTGTCT | + |
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Preference number: 2 (lower is better) Translates to: GSENDGVRLAEPAMT*DGFNTHTLEMATVS Trigger: AGACACAGTCGCCATTTCTAGAGTATGTGTGTTGAAGCCATCCAAGGTCATAGCTGGCTCAGCCAGCCTCACTCCATCGTTCTCACTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
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| 3UTR-3UTR TCA 90 bp | ACATACACACACACACACACACAGGACCAACCTTCAGGCTTATGGCTTTGGAAGCTGAGCAGTGACGACTaGCTCTGTGTGCGTGTGTGC | + |
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Preference number: 2 (lower is better) Translates to: TYTHTHTQDQPSGLWLWKLSSDD*LCVRVC Trigger: GCACACACGCACACAGAGTCAGTCGTCACTGCTCAG...CTTCCAAAGCCATAAGCCTGAAGGTTGGTCCTGTGTGTGTGTGTGTGTGTATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
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| 3UTR-3UTR CCA 90 bp | GAGCAGAACTCAGTGGTTATCAATGGCTCTGACGATCCCTGTTTTCCCTCCTCAGCATTTGTGGTACCTTaGGATGCCAGGGCCAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: EQNSVVINGSDDPCFPSSAFVVP*DARARA Trigger: TGCTCTGGCCCTGGCATCCCAAGGTACCACAAATGC...TGAGGAGGGAAAACAGGGATCGTCAGAGCCATTGATAACCACTGAGTTCTGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
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| 3UTR-3UTR CCA 90 bp | AAGTGGCTGCCGCCGTTGCCATGGTACCTGGTACTGACAGGTGGACACAGCTTTTTCTGCTGGCTACACTaGCTGAATGTGAAAGTCACT | + |
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Preference number: 2 (lower is better) Translates to: KWLPPLPWYLVLTGGHSFFCWLH*LNVKVT Trigger: AGTGACTTTCACATTCAGCCAGTGTAGCCAGCAGAA...AAAGCTGTGTCCACCTGTCAGTACCAGGTACCATGGCAACGGCGGCAGCCACTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
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| 3UTR-3UTR CCA 90 bp | CAGCAAGTCAGAAATGGTCATTCCACAGCGGGCTCGTTCCGGAGGCTCGGCAGCGAATCCATGCATTTGTaGATCAGAAATTTCTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: QQVRNGHSTAGSFRRLGSESMHL*IRNFCW Trigger: CCAGCAGAAATTTCTGATCCACAAATGCATGGATTC...GCTGCCGAGCCTCCGGAACGAGCCCGCTGTGGAATGACCATTTCTGACTTGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
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| 3UTR-3UTR CCA 90 bp | AGGAAAAACCCGCTCTTGGGAAAGGGCGCCAACCCATCCCTCCTTGAAAGACGTGAGTCCGTGAGATACTaGAATGACACATTAACCCGC | + |
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Preference number: 2 (lower is better) Translates to: RKNPLLGKGANPSLLERRESVRY*NDTLTR Trigger: GCGGGTTAATGTGTCATTCCAGTATCTCACGGACTC...ACGTCTTTCAAGGAGGGATGGGTTGGCGCCCTTTCCCAAGAGCGGGTTTTTCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
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| 3UTR-3UTR TCA 90 bp | AAGTGGCTGCCGCCGTTGCCATGGTACCTGGTACTGACAGGTGGACACAGCTTTATTGCAAACCCTTTTTaGGGACAGTACAGGAGTTGT | + |
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Preference number: 2 (lower is better) Translates to: KWLPPLPWYLVLTGGHSFIANPF*GQYRSC Trigger: ACAACTCCTGTACTGTCCTCAAAAAGGGTTTGCAAT...AAAGCTGTGTCCACCTGTCAGTACCAGGTACCATGGCAACGGCGGCAGCCACTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
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| 3UTR-3UTR GCA 90 bp | AAGTGGCTGCCGCCGTTGCCATGGTACCTGGTACTGACAGGTGGACACAGCTTTTGGATCAGAAATTTCTaGTGGCTACACTGGCTGAAT | + |
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Preference number: 2 (lower is better) Translates to: KWLPPLPWYLVLTGGHSFWIRNF*WLHWLN Trigger: ATTCAGCCAGTGTAGCCAGCAGAAATTTCTGATCCA...AAAGCTGTGTCCACCTGTCAGTACCAGGTACCATGGCAACGGCGGCAGCCACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
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| 3UTR-3UTR CCA 90 bp | CCTTGGGCAGTTAAGAGGGCACAGCCTATTTTCTGCATCACCTTTAAGTTGTGTAGAAACACAGAGGACTaGCAGCCAGGCCCTGGGCTT | + |
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Preference number: 2 (lower is better) Translates to: PWAVKRAQPIFCITFKLCRNTED*QPGPGL Trigger: AAGCCCAGGGCCTGGCTGCCAGTCCTCTGTGTTTCT...ACACAACTTAAAGGTGATGCAGAAAATAGGCTGTGCCCTCTTAACTGCCCAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
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| 3UTR-3UTR GCA 90 bp | AGAAATTTCTGCTGGCTACACTGGCTGAATGTGAAAGTCACTGATCTGTTCTGTTGTGGTACCTTGGGATaGCAGGGCCAGAGCATGGGG | + |
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Preference number: 2 (lower is better) Translates to: RNFCWLHWLNVKVTDLFCCGTLG*QGQSMG Trigger: CCCCATGCTCTGGCCCTGGCATCCCAAGGTACCACA...ACAGAACAGATCAGTGACTTTCACATTCAGCCAGTGTAGCCAGCAGAAATTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
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| 3UTR-3UTR TCA 90 bp | ACACACAGGACCAACCTTCAGGCTTATGGCTTTGGAAGTCTTCTTAATTTAACAGGTTGGGCTGAGCAGTaGCGACTGACTCTGTGTGCG | + |
|
Preference number: 2 (lower is better) Translates to: THRTNLQAYGFGSLLNLTGWAEQ*RLTLCA Trigger: CGCACACAGAGTCAGTCGTCACTGCTCAGCCCAACC...TGTTAAATTAAGAAGACTTCCAAAGCCATAAGCCTGAAGGTTGGTCCTGTGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| 3UTR-3UTR GCA 90 bp | ATAAAGCCCAAATTGGTGGCTTGGGACATTGCACATGGGCCTGCTGTGTTGGGAAGCATCTGCAGATATTaGTATAGTTCCCCACTTGCC | + |
|
Preference number: 2 (lower is better) Translates to: IKPKLVAWDIAHGPAVLGSICRY*YSSPLA Trigger: GGCAAGTGGGGAACTATAGCAATATCTGCAGATGCT...TCCCAACACAGCAGGCCCATGTGCAATGTCCCAAGCCACCAATTTGGGCTTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
||
| 3UTR-3UTR CCA 90 bp | AGGGCACAGCCTATTTTCTGCATCACCTTTAAGTTGTGTGTTTGTGTGCACATGGCATTTGTGGTACCTTaGGATGCCAGGGCCAGAGCA | + |
|
Preference number: 2 (lower is better) Translates to: RAQPIFCITFKLCVCVHMAFVVP*DARARA Trigger: TGCTCTGGCCCTGGCATCCCAAGGTACCACAAATGC...CATGTGCACACAAACACACAACTTAAAGGTGATGCAGAAAATAGGCTGTGCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| 3UTR CAA 90 bp | GCAAAGGTAACTGGAGTTTCTGGCTTGTGTGACATGGTCTGGTTGTaGTTCAGCTCTCACTATCTAGGTGGTCTTAGTCCCAAGGTGGTT | + |
|
Preference number: 2 (lower is better) Translates to: AKVTGVSGLCDMVWL*FSSHYLGGLSPKVV Trigger: AACCACCTTGGGACTAAGACCACCTAGATAGTGAGAGCTGAACAACAACCAGACCATGTCACACAAGCCAGAAACTCCAGTTACCTTTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
||
| 3UTR CAA 90 bp | TTGGCAAAGGTAACTGGAGTTTCTGGCTTGTGTGACATGGTCTGGTaGTTGTTCAGCTCTCACTATCTAGGTGGTCTTAGTCCCAAGGTG | + |
|
Preference number: 2 (lower is better) Translates to: LAKVTGVSGLCDMVW*LFSSHYLGGLSPKV Trigger: CACCTTGGGACTAAGACCACCTAGATAGTGAGAGCTGAACAACAACCAGACCATGTCACACAAGCCAGAAACTCCAGTTACCTTTGCCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
||
| 3UTR-3UTR TCA 90 bp | ACACACAGGACCAACCTTCAGGCTTATGGCTTTGGAAGTCTTCTTAATTTAACACTGAGCAGTGACGACTaGCTCTGTGTGCGTGTGTGC | + |
|
Preference number: 2 (lower is better) Translates to: THRTNLQAYGFGSLLNLTLSSDD*LCVRVC Trigger: GCACACACGCACACAGAGTCAGTCGTCACTGCTCAG...TGTTAAATTAAGAAGACTTCCAAAGCCATAAGCCTGAAGGTTGGTCCTGTGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| 3UTR-3UTR TCA 90 bp | ATAAAGCCCAAATTGGTGGCTTGGGACATTGCACATGGGCCTGCTGTGTTGGGAAAAAGTACTAGAGAATaGGGAAAGACTGTCAGGAGC | + |
|
Preference number: 2 (lower is better) Translates to: IKPKLVAWDIAHGPAVLGKSTRE*GKTVRS Trigger: GCTCCTGACAGTCTTTCCTCATTCTCTAGTACTTTT...TCCCAACACAGCAGGCCCATGTGCAATGTCCCAAGCCACCAATTTGGGCTTTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
||
| 3UTR-3UTR CCA 90 bp | ACACACAGGACCAACCTTCAGGCTTATGGCTTTGGAAGTCTTCTTAATTTAACAAGAAACACAGAGGACTaGCAGCCAGGCCCTGGGCTT | + |
|
Preference number: 2 (lower is better) Translates to: THRTNLQAYGFGSLLNLTRNTED*QPGPGL Trigger: AAGCCCAGGGCCTGGCTGCCAGTCCTCTGTGTTTCT...TGTTAAATTAAGAAGACTTCCAAAGCCATAAGCCTGAAGGTTGGTCCTGTGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| 3UTR-3UTR CCA 90 bp | AATCGTCCTTCAAGAAAGCTCCGTGGTCGGAACTGCTCTGAACAGGAGGCAATAATGATTGCTTTTCCTTaGGCAGTTAAGAGGGCACAG | + |
|
Preference number: 2 (lower is better) Translates to: NRPSRKLRGRNCSEQEAIMIAFP*AVKRAQ Trigger: CTGTGCCCTCTTAACTGCCCAAGGAAAAGCAATCAT...TATTGCCTCCTGTTCAGAGCAGTTCCGACCACGGAGCTTTCTTGAAGGACGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
||
| 3UTR-3UTR TCA 90 bp | GAGCAGAACTCAGTGGTTATCAATGGCTCTGACGATCCCTGTTTTCCCTCCTCACACTCCAAACACAACTaGCTTCTTAAACCTAAGGGT | + |
|
Preference number: 2 (lower is better) Translates to: EQNSVVINGSDDPCFPSSHSKHN*LLKPKG Trigger: ACCCTTAGGTTTAAGAAGTCAGTTGTGTTTGGAGTG...TGAGGAGGGAAAACAGGGATCGTCAGAGCCATTGATAACCACTGAGTTCTGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| 3UTR-3UTR CCA 90 bp | TTCCTTATGGCTGCCGTCATCCCAATGGGAGTGATTGGTAACGGCCGGACACCAATTTTGTATCACTCCTaGAGAAAAACCTGCTTGTAT | + |
|
Preference number: 2 (lower is better) Translates to: FLMAAVIPMGVIGNGRTPILYHS*RKTCLY Trigger: ATACAAGCAGGTTTTTCTCCAGGAGTGATACAAAAT...TGGTGTCCGGCCGTTACCAATCACTCCCATTGGGATGACGGCAGCCATAAGGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222458.2 |
||
| 3UTR-3UTR GCA 90 bp | GATATTAATTGCAAACCCTTTTTGAGGACAGTACAGGAGTTGTATTGTTTGTCATGTGGTACCTTGGGATaGCAGGGCCAGAGCATGGGG | + |
|
Preference number: 2 (lower is better) Translates to: DINCKPFLRTVQELYCLSCGTLG*QGQSMG Trigger: CCCCATGCTCTGGCCCTGGCATCCCAAGGTACCACA...TGACAAACAATACAACTCCTGTACTGTCCTCAAAAAGGGTTTGCAATTAATATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| 3UTR-3UTR TCA 90 bp | CCTTGGGCAGTTAAGAGGGCACAGCCTATTTTCTGCATCACCTTTAAGTTGTGTCACTCCAAACACAACTaGCTTCTTAAACCTAAGGGT | + |
|
Preference number: 2 (lower is better) Translates to: PWAVKRAQPIFCITFKLCHSKHN*LLKPKG Trigger: ACCCTTAGGTTTAAGAAGTCAGTTGTGTTTGGAGTG...ACACAACTTAAAGGTGATGCAGAAAATAGGCTGTGCCCTCTTAACTGCCCAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| 3UTR CAA 90 bp | AGTAAGCGTCCCATAACTCTCTCGAGTCTATCGTACACACTAAGTTaGCCCTCGAATTATTGCGTCGTGTTAAACACATACAGACATAGG | + |
|
Preference number: 2 (lower is better) Translates to: SKRPITLSSLSYTLS*PSNYCVVLNTYRHR Trigger: CCTATGTCTGTATGTGTTTAACACGACGCAATAATTCGAGGGCAAACTTAGTGTGTACGATAGACTCGAGAGAGTTATGGGACGCTTACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
||
| 3UTR-3UTR TCA 90 bp | AGGGCACAGCCTATTTTCTGCATCACCTTTAAGTTGTGTGTTTGTGTGCACATGCACTCCAAACACAACTaGCTTCTTAAACCTAAGGGT | + |
|
Preference number: 2 (lower is better) Translates to: RAQPIFCITFKLCVCVHMHSKHN*LLKPKG Trigger: ACCCTTAGGTTTAAGAAGTCAGTTGTGTTTGGAGTG...CATGTGCACACAAACACACAACTTAAAGGTGATGCAGAAAATAGGCTGTGCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| 3UTR-3UTR GCA 90 bp | GATATTAATTGCAAACCCTTTTTGAGGACAGTACAGGAGTTGTATTGTTTGTCAGTGCCTCCTAGGTGGTaGTCCATGTTCCTGTGGCAT | + |
|
Preference number: 2 (lower is better) Translates to: DINCKPFLRTVQELYCLSVPPRW*SMFLWH Trigger: ATGCCACAGGAACATGGAGCACCACCTAGGAGGCAC...TGACAAACAATACAACTCCTGTACTGTCCTCAAAAAGGGTTTGCAATTAATATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| 3UTR-3UTR CCA 90 bp | GATATTAATTGCAAACCCTTTTTGAGGACAGTACAGGAGTTGTATTGTTTGTCAGCATTTGTGGTACCTTaGGATGCCAGGGCCAGAGCA | + |
|
Preference number: 2 (lower is better) Translates to: DINCKPFLRTVQELYCLSAFVVP*DARARA Trigger: TGCTCTGGCCCTGGCATCCCAAGGTACCACAAATGC...TGACAAACAATACAACTCCTGTACTGTCCTCAAAAAGGGTTTGCAATTAATATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| 3UTR-3UTR TCA 90 bp | GATATTAATTGCAAACCCTTTTTGAGGACAGTACAGGAGTTGTATTGTTTGTCAGTCATTTCTTGGGCATaGTTGCTTTTCCTTGGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: DINCKPFLRTVQELYCLSVISWA*LLFLGQ Trigger: CTGCCCAAGGAAAAGCAATCATGCCCAAGAAATGAC...TGACAAACAATACAACTCCTGTACTGTCCTCAAAAAGGGTTTGCAATTAATATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| 3UTR TCA 72 bp | CCCGCTCTTGGGAAAGGGCGCCAACCCATCCCTCCTTaGAAGACGTGGCCCCAAGATGGAGACCTGCCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: PALGKGRQPIPP*KTWPQDGDLPQ Trigger: CTGGGGCAGGTCTCCATCTTGGGGCCACGTCTTTCAAGGAGGGATGGGTTGGCGCCCTTTCCCAAGAGCGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
||
| 3UTR CCA 72 bp | GGGCTGGGTTTCCGGTCCTCCTCCTCTGGTTCACTGTaGCTCTCATGGCTCTGGAAGCTTCCCTCACTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: GLGFRSSSSGSL*LSWLWKLPSLP Trigger: GGGCAGTGAGGGAAGCTTCCAGAGCCATGAGAGCCACAGTGAACCAGAGGAGGAGGACCGGAAACCCAGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222458.2 |
||
| 3UTR CCA 72 bp | GGTGGTCTTAGTCCCAAGGTGGTTACTGTGCCGAAGTaGCAGAGATGGCCAGCCCCCTCCTCACTGCGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: GGLSPKVVTVPK*QRWPAPSSLRN Trigger: ATTGCGCAGTGAGGAGGGGGCTGGCCATCTCTGCCACTTCGGCACAGTAACCACCTTGGGACTAAGACCACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
||
| 3UTR CCA 72 bp | CACCCAAAAGCTGCCCTCAGGTTAGGTAGGGGGAAGTaGCTGCCGCCGTTGCCATGGTACCTGGTACTGACA | + |
|
Preference number: 3 (lower is better) Translates to: HPKAALRLGRGK*LPPLPWYLVLT Trigger: TGTCAGTACCAGGTACCATGGCAACGGCGGCAGCCACTTCCCCCTACCTAACCTGAGGGCAGCTTTTGGGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
||
| 3UTR CCA 72 bp | CCAACCCATCCCTCCTTGAAAGACGTGGCCCCAAGATaGAGACCTGCCCCAGTCATCCTGACCACGAGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: PTHPSLKDVAPR*RPAPVILTTSS Trigger: GGAACTCGTGGTCAGGATGACTGGGGCAGGTCTCCATCTTGGGGCCACGTCTTTCAAGGAGGGATGGGTTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
||
| 3UTR CCA 72 bp | AAGGCTAAGAAACACAGAGGACTGGCAGCCAGGCCCTaGGCTTGCCACACAGCAAGGCCGATGGCATTTGTG | + |
|
Preference number: 3 (lower is better) Translates to: KAKKHRGLAARP*ACHTARPMAFV Trigger: CACAAATGCCATCGGCCTTGCTGTGTGGCAAGCCCAGGGCCTGGCTGCCAGTCCTCTGTGTTTCTTAGCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| 3UTR CCA 72 bp | GCATTTGTGGTACCTTGGGATGCCAGGGCCAGAGCATaGGGTTATCCTCTAGGGGACAAGGGCTCTTCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: AFVVPWDARARA*GYPLGDKGSSV Trigger: GACTGAAGAGCCCTTGTCCCCTAGAGGATAACCCCATGCTCTGGCCCTGGCATCCCAAGGTACCACAAATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| 3UTR CCA 72 bp | TGCCACACAGCAAGGCCGATGGCATTTGTGGTACCTTaGGATGCCAGGGCCAGAGCATGGGGTTATCCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: CHTARPMAFVVP*DARARAWGYPL Trigger: TAGAGGATAACCCCATGCTCTGGCCCTGGCATCCCAAGGTACCACAAATGCCATCGGCCTTGCTGTGTGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| 3UTR CCA 72 bp | TGGTGGCTTGGGACATTGCACATGGGCCTGCTGTGTTaGGACTGTAAGCACCAAAACCACCCCATCTGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: WWLGTLHMGLLC*DCKHQNHPICG Trigger: GCCACAGATGGGGTGGTTTTGGTGCTTACAGTCCCAACACAGCAGGCCCATGTGCAATGTCCCAAGCCACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
||
| 3UTR GCA 72 bp | CTCTTCAGTAGAGAATCAGAGGGGGTCGGGGCTGAGTaGAGACAAGGCAGTACAGAGCTCAACCATCCAAGC | + |
|
Preference number: 3 (lower is better) Translates to: LFSRESEGVGAE*RQGSTELNHPS Trigger: GCTTGGATGGTTGAGCTCTGTACTGCCTTGTCTGCACTCAGCCCCGACCCCCTCTGATTCTCTACTGAAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
||
| 3UTR GCA 72 bp | GCCCAAATTGGTGGCTTGGGACATTGCACATGGGCCTaGTGTGTTGGGACTGTAAGCACCAAAACCACCCCA | + |
|
Preference number: 3 (lower is better) Translates to: AQIGGLGHCTWA*CVGTVSTKTTP Trigger: TGGGGTGGTTTTGGTGCTTACAGTCCCAACACAGCAGGCCCATGTGCAATGTCCCAAGCCACCAATTTGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
||
| 3UTR CCA 72 bp | AGGTTAGGTAGGGGGAAGTGGCTGCCGCCGTTGCCATaGTACCTGGTACTGACAGGTGGACACAGCTTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: RLGRGKWLPPLP*YLVLTGGHSFK Trigger: TTTAAAGCTGTGTCCACCTGTCAGTACCAGGTACCATGGCAACGGCGGCAGCCACTTCCCCCTACCTAACCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
||
| 3UTR TCA 72 bp | TCGTCCTTCAAGAAAGCTCCGTGGTCGGAACTGCTCTaGACAGGAGGCAATAGACAGGCTAGCGACTACAGG | + |
|
Preference number: 3 (lower is better) Translates to: SSFKKAPWSELL*TGGNRQASDYR Trigger: CCTGTAGTCGCTAGCCTGTCTATTGCCTCCTGTTCAGAGCAGTTCCGACCACGGAGCTTTCTTGAAGGACGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
||
| 3UTR CCA 72 bp | ATAGACAGGCTAGCGACTACAGGAAAAACCCGCTCTTaGGAAAGGGCGCCAACCCATCCCTCCTTGAAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: IDRLATTGKTRS*ERAPTHPSLKD Trigger: GTCTTTCAAGGAGGGATGGGTTGGCGCCCTTTCCCAAGAGCGGGTTTTTCCTGTAGTCGCTAGCCTGTCTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
||
| 3UTR-3UTR CAA 90 bp | CAGCAAGTCAGAAATGGTCATTCCACAGCGGGCTCGTTCCGGAGGCTCGGCAGCGCCACGGTAGTGATTTaGTTTTTAAATGTTCCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: QQVRNGHSTAGSFRRLGSATVVI*FLNVPS Trigger: GGAGGGAACATTTAAAAACAAAATCACTACCGTGGC...GCTGCCGAGCCTCCGGAACGAGCCCGCTGTGGAATGACCATTTCTGACTTGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
||
| 3UTR TCA 72 bp | GTGAGTCTCTCTCTTCTCTTAACTGTGTCTGAGGGCTaGCAGCCGGCAGTTGTTATGTCGCGGTGCTATGTG | + |
|
Preference number: 3 (lower is better) Translates to: VSLSLLLTVSEG*QPAVVMSRCYV Trigger: CACATAGCACCGCGACATAACAACTGCCGGCTGTCAGCCCTCAGACACAGTTAAGAGAAGAGAGAGACTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
||
| 3UTR-3UTR CAA 90 bp | CCTTGGGCAGTTAAGAGGGCACAGCCTATTTTCTGCATCACCTTTAAGTTGTGTGGCATTTGTGGTACCTaGGGATGCCAGGGCCAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: PWAVKRAQPIFCITFKLCGICGT*GCQGQS Trigger: GCTCTGGCCCTGGCATCCCAAGGTACCACAAATGCC...ACACAACTTAAAGGTGATGCAGAAAATAGGCTGTGCCCTCTTAACTGCCCAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCCTCACTGCGCAATCACACTGTCACAGTAGAACGCTCGCTCGCTCGCTCGGGCTTCTTCTGGCGAATTaGCATAATTATTCACTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: LLTAQSHCHSRTLARSLGLLLAN*HNYSLP Trigger: AGGCAGTGAATAATTATGCAAATTCGCCAGAAGAAG...CCCGAGCGAGCGAGCGAGCGTTCTACTGTGACAGTGTGATTGCGCAGTGAGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
||
| 3UTR-3UTR CAA 90 bp | ACTGCCTTTTTCCTAGAACCAGATCACGGTAAGGATTTTCCTCAAGTAAGCGTCGGCATTTGTGGTACCTaGGGATGCCAGGGCCAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: TAFFLEPDHGKDFPQVSVGICGT*GCQGQS Trigger: GCTCTGGCCCTGGCATCCCAAGGTACCACAAATGCC...GACGCTTACTTGAGGAAAATCCTTACCGTGATCTGGTTCTAGGAAAAAGGCAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
||
| 3UTR TCA 72 bp | AAAGAGAGTGAGTCTCTCTCTTCTCTTAACTGTGTCTaGGGGCTGACAGCCGGCAGTTGTTATGTCGCGGTG | + |
|
Preference number: 3 (lower is better) Translates to: KESESLSSLNCV*GLTAGSCYVAV Trigger: CACCGCGACATAACAACTGCCGGCTGTCAGCCCTCAGACACAGTTAAGAGAAGAGAGAGACTCACTCTCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
||
| 3UTR CCA 72 bp | GATAAAGCCCAAATTGGTGGCTTGGGACATTGCACATaGGCCTGCTGTGTTGGGACTGTAAGCACCAAAACC | + |
|
Preference number: 3 (lower is better) Translates to: DKAQIGGLGHCT*ACCVGTVSTKT Trigger: GGTTTTGGTGCTTACAGTCCCAACACAGCAGGCCCATGTGCAATGTCCCAAGCCACCAATTTGGGCTTTATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
||
| 3UTR GCA 72 bp | CATCGGAAGAAGCCCCCTGCCACAAACAGTGCTGAGTaGTTACCTTTACCTTCAGGTCTGAGTTTGAACATC | + |
|
Preference number: 3 (lower is better) Translates to: HRKKPPATNSAE*LPLPSGLSLNI Trigger: GATGTTCAAACTCAGACCTGAAGGTAAAGGTAAGCACTCAGCACTGTTTGTGGCAGGGGGCTTCTTCCGATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
||
| 3UTR TCA 72 bp | TTTGCATCGGAAGAAGCCCCCTGCCACAAACAGTGCTaGGTGCTTACCTTTACCTTCAGGTCTGAGTTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: FASEEAPCHKQC*VLTFTFRSEFE Trigger: TTCAAACTCAGACCTGAAGGTAAAGGTAAGCACTCAGCACTGTTTGTGGCAGGGGGCTTCTTCCGATGCAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
||
| 3UTR-3UTR CAA 90 bp | ATAAAGCCCAAATTGGTGGCTTGGGACATTGCACATGGGCCTGCTGTGTTGGGACCCAACAGTCAGAATTaGTCCCTGAAGAAGGTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: IKPKLVAWDIAHGPAVLGPNSQN*SLKKVK Trigger: TTTAACCTTCTTCAGGGACAAATTCTGACTGTTGGG...TCCCAACACAGCAGGCCCATGTGCAATGTCCCAAGCCACCAATTTGGGCTTTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
||
| 3UTR-3UTR CAA 90 bp | AATCGTCCTTCAAGAAAGCTCCGTGGTCGGAACTGCTCTGAACAGGAGGCAATACATGTTTTTGCTTTGTaGAGTCCATCAATGTGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: NRPSRKLRGRNCSEQEAIHVFAL*SPSMCL Trigger: AAGGCACATTGATGGACTCAACAAAGCAAAAACATG...TATTGCCTCCTGTTCAGAGCAGTTCCGACCACGGAGCTTTCTTGAAGGACGATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
||
| 3UTR CCA 72 bp | AAGGTAACTGGAGTTTCTGGCTTGTGTGACATGGTCTaGTTGTTGTTCAGCTCTCACTATCTAGGTGGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: KVTGVSGLCDMV*LLFSSHYLGGL Trigger: AAGACCACCTAGATAGTGAGAGCTGAACAACAACCAGACCATGTCACACAAGCCAGAAACTCCAGTTACCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
||
| 3UTR CCA 72 bp | CCACGAGTTCCTTATGCCACAATCTGTGTGTGGTTTTaGTTCAGCTTTAGATTCAGAGAGCCAGCTTTACTA | + |
|
Preference number: 3 (lower is better) Translates to: PRVPYATICVWF*FSFRFREPALL Trigger: TAGTAAAGCTGGCTCTCTGAATCTAAAGCTGAACCAAAACCACACACAGATTGTGGCATAAGGAACTCGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
||
| 3UTR-3UTR CAA 90 bp | TTGTTGTTCAGCTCTCACTATCTAGGTGGTCTTAGTCCCAAGGTGGTTACTGTGTGTCATGTTTTTGCTTaGTTGAGTCCATCAATGTGC | + |
|
Preference number: 3 (lower is better) Translates to: LLFSSHYLGGLSPKVVTVCHVFA*LSPSMC Trigger: GCACATTGATGGACTCAACAAAGCAAAAACATGACA...CACAGTAACCACCTTGGGACTAAGACCACCTAGATAGTGAGAGCTGAACAACAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
||
| 3UTR-3UTR CAA 90 bp | TTGTTGTTCAGCTCTCACTATCTAGGTGGTCTTAGTCCCAAGGTGGTTACTGTGAAGGAATCCATGCATTaGTGGATCAGAAATTTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: LLFSSHYLGGLSPKVVTVKESMH*WIRNFC Trigger: GCAGAAATTTCTGATCCACAAATGCATGGATTCCTT...CACAGTAACCACCTTGGGACTAAGACCACCTAGATAGTGAGAGCTGAACAACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
||
| 3UTR GCA 72 bp | TTTGCAAAAGGGTGGAGAAGGCATGTTCTCTACTTTTaGAAATGCAACACAGTGGAGGAACACTGCTGTATA | + |
|
Preference number: 3 (lower is better) Translates to: FAKGWRRHVLYF*KCNTVEEHCCI Trigger: TATACAGCAGTGTTCCTCCACTGTGTTGCATTTGCAAAAGTAGAGAACATGCCTTCTCCACCCTTTTGCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
||
| 3UTR TCA 72 bp | TGCAGAGTAAGTTCCCCAACAGTCAGAATTTGTCCCTaGAGAAGGTTAAACCTTAAACACCTGCTTCAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: CRVSSPTVRICP*RRLNLKHLLQK Trigger: TTTTTGAAGCAGGTGTTTAAGGTTTAACCTTCTTCAGGGACAAATTCTGACTGTTGGGGAACTTACTCTGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
||
| CDS-3UTR CCA 90 bp | CTCCTCACTGCGCAATCACACTGTCACAGTAGAACGCTCGCTCGCTCGCTCGGGAGGAGATGGAGTCGCTaGTGGGAGAGGTGCTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LLTAQSHCHSRTLARSLGRRWSR*WERCSG Trigger: CCCGGAGCACCTCTCCCACCAGCGACTCCATCTCCT...CCCGAGCGAGCGAGCGAGCGTTCTACTGTGACAGTGTGATTGCGCAGTGAGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
||
| 3UTR CAA 72 bp | GCCCTCAGGTTAGGTAGGGGGAAGTGGCTGCCGCCGTaGCCATGGTACCTGGTACTGACAGGTGGACACAGC | + |
|
Preference number: 4 (lower is better) Translates to: ALRLGRGKWLPP*PWYLVLTGGHS Trigger: GCTGTGTCCACCTGTCAGTACCAGGTACCATGGCAACGGCGGCAGCCACTTCCCCCTACCTAACCTGAGGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
||
| 3UTR CAA 72 bp | ACCCGCTCTTGGGAAAGGGCGCCAACCCATCCCTCCTaGAAAGACGTGGCCCCAAGATGGAGACCTGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TRSWERAPTHPS*KDVAPRWRPAP Trigger: TGGGGCAGGTCTCCATCTTGGGGCCACGTCTTTCAAGGAGGGATGGGTTGGCGCCCTTTCCCAAGAGCGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
||
| CDS-3UTR GCA 90 bp | TGCCAGGGCCAGAGCATGGGGTTATCCTCTAGGGGACAAGGGCTCTTCAGTCTCCGAATCCCTGCTAAGTaGAGGAGTGAACCGGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: CQGQSMGLSSRGQGLFSLRIPAK*RSEPAA Trigger: GGCGGCCGGTTCACTCCTGCACTTAGCAGGGATTCG...GAGACTGAAGAGCCCTTGTCCCCTAGAGGATAACCCCATGCTCTGGCCCTGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| CDS-3UTR CCA 90 bp | CAGCAAGTCAGAAATGGTCATTCCACAGCGGGCTCGTTCCGGAGGCTCGGCAGCCCGGTCCTCCTCCTCTaGTTCACTGTGGCTCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: QQVRNGHSTAGSFRRLGSPVLLL*FTVALM Trigger: CATGAGAGCCACAGTGAACCAGAGGAGGAGGACCGG...GCTGCCGAGCCTCCGGAACGAGCCCGCTGTGGAATGACCATTTCTGACTTGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
||
| CDS-3UTR CCA 90 bp | TGCCAGGGCCAGAGCATGGGGTTATCCTCTAGGGGACAAGGGCTCTTCAGTCTCCCGGTCCTCCTCCTCTaGTTCACTGTGGCTCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: CQGQSMGLSSRGQGLFSLPVLLL*FTVALM Trigger: CATGAGAGCCACAGTGAACCAGAGGAGGAGGACCGG...GAGACTGAAGAGCCCTTGTCCCCTAGAGGATAACCCCATGCTCTGGCCCTGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| CDS-3UTR CCA 90 bp | TGCCAGGGCCAGAGCATGGGGTTATCCTCTAGGGGACAAGGGCTCTTCAGTCTCTGGCGCTTCTTGTGCTaGGATGCGTATCCGCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: CQGQSMGLSSRGQGLFSLWRFLC*DAYPLS Trigger: GGACAGCGGATACGCATCCCAGCACAAGAAGCGCCA...GAGACTGAAGAGCCCTTGTCCCCTAGAGGATAACCCCATGCTCTGGCCCTGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| CDS-3UTR CCA 90 bp | CAGCAAGTCAGAAATGGTCATTCCACAGCGGGCTCGTTCCGGAGGCTCGGCAGCGTAGATGTCCTTCACTaGAAGGCGCTTGGTCGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: QQVRNGHSTAGSFRRLGSVDVLH*KALGRR Trigger: TCTCCGACCAAGCGCCTTCCAGTGAAGGACATCTAC...GCTGCCGAGCCTCCGGAACGAGCCCGCTGTGGAATGACCATTTCTGACTTGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
||
| CDS-3UTR GCA 90 bp | AGAGCATGGGGTTATCCTCTAGGGGACAAGGGCTCTTCAGTCTCTGTAACTGCTCCCCCAGGGCATCCTTaGCTTCCTTCGGGCTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: RAWGYPLGDKGSSVSVTAPPGHP*LPSGWV Trigger: AACCCAGCCCGAAGGAAGGCAAGGATGCCCTGGGGG...AGCAGTTACAGAGACTGAAGAGCCCTTGTCCCCTAGAGGATAACCCCATGCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| CDS-3UTR GCA 90 bp | AGCATGGGGTTATCCTCTAGGGGACAAGGGCTCTTCAGTCTCTGTAACTGCTTCCCCCCAGGGCATCCTTaGCTTCCTTCGGGCTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SMGLSSRGQGLFSLCNCFPPGHP*LPSGWV Trigger: AACCCAGCCCGAAGGAAGGCAAGGATGCCCTGGGGG...GAAGCAGTTACAGAGACTGAAGAGCCCTTGTCCCCTAGAGGATAACCCCATGCT 57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| CDS-3UTR GCA 90 bp | GGCACTACTGTAGTTGTGGTCCTCCTTCGGATCGCCACTGACCACTGGGGAGCCTCAATGTCAGGATCTTaGAGGAGGGCTCCGTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GTTVVVVLLRIATDHWGASMSGS*RRAPFL Trigger: GAGAAACGGAGCCCTCCTGCAAGATCCTGACATTGA...GGCTCCCCAGTGGTCAGTGGCGATCCGAAGGAGGACCACAACTACAGTAGTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222458.2 |
||
| CDS-3UTR CCA 90 bp | ATAAAGCCCAAATTGGTGGCTTGGGACATTGCACATGGGCCTGCTGTGTTGGGACTTCCTGGAGGGCCTTaGAGAAACCGCTGCCCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: IKPKLVAWDIAHGPAVLGLPGGP*RNRCPG Trigger: ACCGGGGCAGCGGTTTCTCCAAGGCCCTCCAGGAAG...TCCCAACACAGCAGGCCCATGTGCAATGTCCCAAGCCACCAATTTGGGCTTTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
||
| CDS-3UTR CCA 90 bp | AGCATGGGGTTATCCTCTAGGGGACAAGGGCTCTTCAGTCTCTGTAACTGCTTCCTTCCTGGAGGGCCTTaGAGAAACCGCTGCCCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: SMGLSSRGQGLFSLCNCFLPGGP*RNRCPG Trigger: ACCGGGGCAGCGGTTTCTCCAAGGCCCTCCAGGAAG...GAAGCAGTTACAGAGACTGAAGAGCCCTTGTCCCCTAGAGGATAACCCCATGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| CDS-3UTR CCA 90 bp | AGAGCATGGGGTTATCCTCTAGGGGACAAGGGCTCTTCAGTCTCTGTAACTGCTAGATGGAGTCGCTGGTaGGAGAGGTGCTCCGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RAWGYPLGDKGSSVSVTARWSRW*ERCSGQ Trigger: CTGCCCGGAGCACCTCTCCCACCAGCGACTCCATCT...AGCAGTTACAGAGACTGAAGAGCCCTTGTCCCCTAGAGGATAACCCCATGCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| CDS-3UTR CCA 90 bp | AGAGCATGGGGTTATCCTCTAGGGGACAAGGGCTCTTCAGTCTCTGTAACTGCTAGGAGATGGAGTCGCTaGTGGGAGAGGTGCTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: RAWGYPLGDKGSSVSVTARRWSR*WERCSG Trigger: CCCGGAGCACCTCTCCCACCAGCGACTCCATCTCCT...AGCAGTTACAGAGACTGAAGAGCCCTTGTCCCCTAGAGGATAACCCCATGCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| 3UTR CAA 72 bp | TTGCCACACAGCAAGGCCGATGGCATTTGTGGTACCTaGGGATGCCAGGGCCAGAGCATGGGGTTATCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LPHSKADGICGT*GCQGQSMGLSS Trigger: AGAGGATAACCCCATGCTCTGGCCCTGGCATCCCAAGGTACCACAAATGCCATCGGCCTTGCTGTGTGGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| CDS-3UTR TCA 90 bp | AGGAAAAACCCGCTCTTGGGAAAGGGCGCCAACCCATCCCTCCTTGAAAGACGTATAGTGGTCGTCGGCTaGGGAGGAGGAAGAGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: RKNPLLGKGANPSLLERRIVVVG*GGGRGD Trigger: ATCTCCTCTTCCTCCTCCTCAGCCGACGACCACTAT...ACGTCTTTCAAGGAGGGATGGGTTGGCGCCCTTTCCCAAGAGCGGGTTTTTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
||
| CDS-3UTR CCA 90 bp | GAGCAGAACTCAGTGGTTATCAATGGCTCTGACGATCCCTGTTTTCCCTCCTCACTTCCTGGAGGGCCTTaGAGAAACCGCTGCCCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: EQNSVVINGSDDPCFPSSLPGGP*RNRCPG Trigger: ACCGGGGCAGCGGTTTCTCCAAGGCCCTCCAGGAAG...TGAGGAGGGAAAACAGGGATCGTCAGAGCCATTGATAACCACTGAGTTCTGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| CDS-3UTR CCA 90 bp | GAGCAGAACTCAGTGGTTATCAATGGCTCTGACGATCCCTGTTTTCCCTCCTCAAGATGGAGTCGCTGGTaGGAGAGGTGCTCCGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: EQNSVVINGSDDPCFPSSRWSRW*ERCSGQ Trigger: CTGCCCGGAGCACCTCTCCCACCAGCGACTCCATCT...TGAGGAGGGAAAACAGGGATCGTCAGAGCCATTGATAACCACTGAGTTCTGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| CDS-3UTR CCA 90 bp | AGCATGGGGTTATCCTCTAGGGGACAAGGGCTCTTCAGTCTCTGTAACTGCTTCCCCTCACTGCCCTCCTaGCTCCCCTTCGTAGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SMGLSSRGQGLFSLCNCFPSLPS*LPFVAN Trigger: GTTTGCTACGAAGGGGAGCCAGGAGGGCAGTGAGGG...GAAGCAGTTACAGAGACTGAAGAGCCCTTGTCCCCTAGAGGATAACCCCATGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| CDS-3UTR CCA 90 bp | AGCATGGGGTTATCCTCTAGGGGACAAGGGCTCTTCAGTCTCTGTAACTGCTTCTGCCTTCCTTCGGGCTaGGTTTCCGGTCCTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SMGLSSRGQGLFSLCNCFCLPSG*VSGPPP Trigger: AGGAGGAGGACCGGAAACCCAGCCCGAAGGAAGGCA...GAAGCAGTTACAGAGACTGAAGAGCCCTTGTCCCCTAGAGGATAACCCCATGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| CDS-3UTR GCA 90 bp | ACATACACACACACACACACACAGGACCAACCTTCAGGCTTATGGCTTTGGAAGCCCCCAGGGCATCCTTaGCTTCCTTCGGGCTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: TYTHTHTQDQPSGLWLWKPPGHP*LPSGWV Trigger: AACCCAGCCCGAAGGAAGGCAAGGATGCCCTGGGGG...CTTCCAAAGCCATAAGCCTGAAGGTTGGTCCTGTGTGTGTGTGTGTGTGTATGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| CDS-3UTR GCA 90 bp | AATCGTCCTTCAAGAAAGCTCCGTGGTCGGAACTGCTCTGAACAGGAGGCAATACGAATCCCTGCTAAGTaGAGGAGTGAACCGGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: NRPSRKLRGRNCSEQEAIRIPAK*RSEPAA Trigger: GGCGGCCGGTTCACTCCTGCACTTAGCAGGGATTCG...TATTGCCTCCTGTTCAGAGCAGTTCCGACCACGGAGCTTTCTTGAAGGACGATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
||
| CDS-3UTR CCA 90 bp | GAGCAGAACTCAGTGGTTATCAATGGCTCTGACGATCCCTGTTTTCCCTCCTCATGCCTTCCTTCGGGCTaGGTTTCCGGTCCTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: EQNSVVINGSDDPCFPSSCLPSG*VSGPPP Trigger: AGGAGGAGGACCGGAAACCCAGCCCGAAGGAAGGCA...TGAGGAGGGAAAACAGGGATCGTCAGAGCCATTGATAACCACTGAGTTCTGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| CDS-3UTR CCA 90 bp | AGAGCATGGGGTTATCCTCTAGGGGACAAGGGCTCTTCAGTCTCTGTAACTGCTTGGCGCTTCTTGTGCTaGGATGCGTATCCGCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RAWGYPLGDKGSSVSVTAWRFLC*DAYPLS Trigger: GGACAGCGGATACGCATCCCAGCACAAGAAGCGCCA...AGCAGTTACAGAGACTGAAGAGCCCTTGTCCCCTAGAGGATAACCCCATGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| CDS-3UTR TCA 90 bp | AGAGCATGGGGTTATCCTCTAGGGGACAAGGGCTCTTCAGTCTCTGTAACTGCTTCATCCCAATGGGAGTaGTTGGTAACGGCCGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: RAWGYPLGDKGSSVSVTASSQWE*LVTAGH Trigger: GTGTCCGGCCGTTACCAATCACTCCCATTGGGATGA...AGCAGTTACAGAGACTGAAGAGCCCTTGTCCCCTAGAGGATAACCCCATGCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| CDS-3UTR TCA 90 bp | AGAGCATGGGGTTATCCTCTAGGGGACAAGGGCTCTTCAGTCTCTGTAACTGCTATAGTGGTCGTCGGCTaGGGAGGAGGAAGAGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: RAWGYPLGDKGSSVSVTAIVVVG*GGGRGD Trigger: ATCTCCTCTTCCTCCTCCTCAGCCGACGACCACTAT...AGCAGTTACAGAGACTGAAGAGCCCTTGTCCCCTAGAGGATAACCCCATGCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| CDS-3UTR CCA 90 bp | AAGTGGCTGCCGCCGTTGCCATGGTACCTGGTACTGACAGGTGGACACAGCTTTCTGAGGAGTAGGAGGTaGGTGGTAAGGTGTCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KWLPPLPWYLVLTGGHSFLRSRR*VVRCLF Trigger: AAAAAGACACCTTACCACCCACCTCCTACTCCTCAG...AAAGCTGTGTCCACCTGTCAGTACCAGGTACCATGGCAACGGCGGCAGCCACTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
||
| CDS-3UTR CCA 90 bp | GAGCAGAACTCAGTGGTTATCAATGGCTCTGACGATCCCTGTTTTCCCTCCTCATGGCTCTCATGGCTCTaGAAGCTTCCCTCACTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: EQNSVVINGSDDPCFPSSWLSWL*KLPSLP Trigger: GGGCAGTGAGGGAAGCTTCCAGAGCCATGAGAGCCA...TGAGGAGGGAAAACAGGGATCGTCAGAGCCATTGATAACCACTGAGTTCTGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| CDS-3UTR CCA 90 bp | ACATACACACACACACACACACAGGACCAACCTTCAGGCTTATGGCTTTGGAAGTGCCTTCCTTCGGGCTaGGTTTCCGGTCCTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TYTHTHTQDQPSGLWLWKCLPSG*VSGPPP Trigger: AGGAGGAGGACCGGAAACCCAGCCCGAAGGAAGGCA...CTTCCAAAGCCATAAGCCTGAAGGTTGGTCCTGTGTGTGTGTGTGTGTGTATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| CDS-3UTR CCA 90 bp | GAGCAGAACTCAGTGGTTATCAATGGCTCTGACGATCCCTGTTTTCCCTCCTCATGGCGCTTCTTGTGCTaGGATGCGTATCCGCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: EQNSVVINGSDDPCFPSSWRFLC*DAYPLS Trigger: GGACAGCGGATACGCATCCCAGCACAAGAAGCGCCA...TGAGGAGGGAAAACAGGGATCGTCAGAGCCATTGATAACCACTGAGTTCTGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| CDS-3UTR CCA 90 bp | AGGGCACAGCCTATTTTCTGCATCACCTTTAAGTTGTGTGTTTGTGTGCACATGATCGCCACTGACCACTaGGGAGCCACATGGGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RAQPIFCITFKLCVCVHMIATDH*GATWGL Trigger: GAGCCCCCATGTGGCTCCCCAGTGGTCAGTGGCGAT...CATGTGCACACAAACACACAACTTAAAGGTGATGCAGAAAATAGGCTGTGCCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| CDS-3UTR CCA 90 bp | AGCATGGGGTTATCCTCTAGGGGACAAGGGCTCTTCAGTCTCTGTAACTGCTTCGGGCAGTGGAGGACTTaGCACTACTGTAGTTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SMGLSSRGQGLFSLCNCFGQWRT*HYCSCG Trigger: ACCACAACTACAGTAGTGCCAAGTCCTCCACTGCCC...GAAGCAGTTACAGAGACTGAAGAGCCCTTGTCCCCTAGAGGATAACCCCATGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| CDS-3UTR CCA 90 bp | ACTGCCTTTTTCCTAGAACCAGATCACGGTAAGGATTTTCCTCAAGTAAGCGTCAGATGGAGTCGCTGGTaGGAGAGGTGCTCCGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TAFFLEPDHGKDFPQVSVRWSRW*ERCSGQ Trigger: CTGCCCGGAGCACCTCTCCCACCAGCGACTCCATCT...GACGCTTACTTGAGGAAAATCCTTACCGTGATCTGGTTCTAGGAAAAAGGCAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
||
| CDS-3UTR CCA 90 bp | ACATACACACACACACACACACAGGACCAACCTTCAGGCTTATGGCTTTGGAAGTGGCTCTCATGGCTCTaGAAGCTTCCCTCACTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TYTHTHTQDQPSGLWLWKWLSWL*KLPSLP Trigger: GGGCAGTGAGGGAAGCTTCCAGAGCCATGAGAGCCA...CTTCCAAAGCCATAAGCCTGAAGGTTGGTCCTGTGTGTGTGTGTGTGTGTATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| CDS-3UTR TCA 90 bp | GAGCAGAACTCAGTGGTTATCAATGGCTCTGACGATCCCTGTTTTCCCTCCTCACCAGATGGGTGGACCTaGTGTGCTTTGATAAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: EQNSVVINGSDDPCFPSSPDGWT*CALISL Trigger: CAGGCTTATCAAAGCACATCAGGTCCACCCATCTGG...TGAGGAGGGAAAACAGGGATCGTCAGAGCCATTGATAACCACTGAGTTCTGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| CDS-3UTR TCA 90 bp | ACATACACACACACACACACACAGGACCAACCTTCAGGCTTATGGCTTTGGAAGTCATCCCAATGGGAGTaGTTGGTAACGGCCGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: TYTHTHTQDQPSGLWLWKSSQWE*LVTAGH Trigger: GTGTCCGGCCGTTACCAATCACTCCCATTGGGATGA...CTTCCAAAGCCATAAGCCTGAAGGTTGGTCCTGTGTGTGTGTGTGTGTGTATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| CDS-3UTR GCA 90 bp | GAGCAGAACTCAGTGGTTATCAATGGCTCTGACGATCCCTGTTTTCCCTCCTCAACTCCTGGAGAAACTTaGAGGAGGGCTCCGTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: EQNSVVINGSDDPCFPSSTPGET*RRAPFL Trigger: GAGAAACGGAGCCCTCCTGCAAGTTTCTCCAGGAGT...TGAGGAGGGAAAACAGGGATCGTCAGAGCCATTGATAACCACTGAGTTCTGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| CDS-3UTR CCA 90 bp | AGGGCACAGCCTATTTTCTGCATCACCTTTAAGTTGTGTGTTTGTGTGCACATGCCCTCACTGCCCTCCTaGCTCCCCTTCGTAGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: RAQPIFCITFKLCVCVHMPSLPS*LPFVAN Trigger: GTTTGCTACGAAGGGGAGCCAGGAGGGCAGTGAGGG...CATGTGCACACAAACACACAACTTAAAGGTGATGCAGAAAATAGGCTGTGCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| CDS-3UTR CCA 90 bp | GAGCAGAACTCAGTGGTTATCAATGGCTCTGACGATCCCTGTTTTCCCTCCTCATCCTCTGGTTCACTGTaGCTCTCATGGCTCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: EQNSVVINGSDDPCFPSSSSGSL*LSWLWK Trigger: CTTCCAGAGCCATGAGAGCCACAGTGAACCAGAGGA...TGAGGAGGGAAAACAGGGATCGTCAGAGCCATTGATAACCACTGAGTTCTGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| 3UTR CAA 72 bp | AGTACAGAGGTTGGAGTAGCATCGATAAAGCCCAAATaGGTGGCTTGGGACATTGCACATGGGCCTGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: STEVGVASIKPK*VAWDIAHGPAV Trigger: CACAGCAGGCCCATGTGCAATGTCCCAAGCCACCAATTTGGGCTTTATCGATGCTACTCCAACCTCTGTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
||
| 3UTR CAA 72 bp | AACGATGGAGTGAGGCTGGCTGAGCCAGCTATGACCTaGGATGGCTTCAACACACATACTCTAGAAATGGCG | + |
|
Preference number: 4 (lower is better) Translates to: NDGVRLAEPAMT*DGFNTHTLEMA Trigger: CGCCATTTCTAGAGTATGTGTGTTGAAGCCATCCAAGGTCATAGCTGGCTCAGCCAGCCTCACTCCATCGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
||
| CDS-3UTR TCA 90 bp | AGAGCATGGGGTTATCCTCTAGGGGACAAGGGCTCTTCAGTCTCTGTAACTGCTCCTTTCCCAATACTCTaGCTCCTCTCTTTGTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: RAWGYPLGDKGSSVSVTAPFPIL*LLSLST Trigger: AGTGGACAAAGAGAGGAGTCAGAGTATTGGGAAAGG...AGCAGTTACAGAGACTGAAGAGCCCTTGTCCCCTAGAGGATAACCCCATGCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| CDS-3UTR TCA 90 bp | CCTTGGGCAGTTAAGAGGGCACAGCCTATTTTCTGCATCACCTTTAAGTTGTGTATAGTGGTCGTCGGCTaGGGAGGAGGAAGAGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PWAVKRAQPIFCITFKLCIVVVG*GGGRGD Trigger: ATCTCCTCTTCCTCCTCCTCAGCCGACGACCACTAT...ACACAACTTAAAGGTGATGCAGAAAATAGGCTGTGCCCTCTTAACTGCCCAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| CDS-3UTR GCA 90 bp | ACATACACACACACACACACACAGGACCAACCTTCAGGCTTATGGCTTTGGAAGACTCCTGGAGAAACTTaGAGGAGGGCTCCGTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TYTHTHTQDQPSGLWLWKTPGET*RRAPFL Trigger: GAGAAACGGAGCCCTCCTGCAAGTTTCTCCAGGAGT...CTTCCAAAGCCATAAGCCTGAAGGTTGGTCCTGTGTGTGTGTGTGTGTGTATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| CDS-3UTR CCA 90 bp | ACATACACACACACACACACACAGGACCAACCTTCAGGCTTATGGCTTTGGAAGGTAGATGTCCTTCACTaGAAGGCGCTTGGTCGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TYTHTHTQDQPSGLWLWKVDVLH*KALGRR Trigger: TCTCCGACCAAGCGCCTTCCAGTGAAGGACATCTAC...CTTCCAAAGCCATAAGCCTGAAGGTTGGTCCTGTGTGTGTGTGTGTGTGTATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| CDS-3UTR CCA 90 bp | AGAGCATGGGGTTATCCTCTAGGGGACAAGGGCTCTTCAGTCTCTGTAACTGCTCTGAGGAGTAGGAGGTaGGTGGTAAGGTGTCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: RAWGYPLGDKGSSVSVTALRSRR*VVRCLF Trigger: AAAAAGACACCTTACCACCCACCTCCTACTCCTCAG...AGCAGTTACAGAGACTGAAGAGCCCTTGTCCCCTAGAGGATAACCCCATGCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| CDS-3UTR GCA 90 bp | ACACACAGGACCAACCTTCAGGCTTATGGCTTTGGAAGTCTTCTTAATTTAACACGAATCCCTGCTAAGTaGAGGAGTGAACCGGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: THRTNLQAYGFGSLLNLTRIPAK*RSEPAA Trigger: GGCGGCCGGTTCACTCCTGCACTTAGCAGGGATTCG...TGTTAAATTAAGAAGACTTCCAAAGCCATAAGCCTGAAGGTTGGTCCTGTGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| CDS-3UTR CCA 90 bp | CCTTGGGCAGTTAAGAGGGCACAGCCTATTTTCTGCATCACCTTTAAGTTGTGTGGGCAGTGGAGGACTTaGCACTACTGTAGTTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PWAVKRAQPIFCITFKLCGQWRT*HYCSCG Trigger: ACCACAACTACAGTAGTGCCAAGTCCTCCACTGCCC...ACACAACTTAAAGGTGATGCAGAAAATAGGCTGTGCCCTCTTAACTGCCCAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| CDS-3UTR CCA 90 bp | ACACACAGGACCAACCTTCAGGCTTATGGCTTTGGAAGTCTTCTTAATTTAACACCCTCACTGCCCTCCTaGCTCCCCTTCGTAGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: THRTNLQAYGFGSLLNLTPSLPS*LPFVAN Trigger: GTTTGCTACGAAGGGGAGCCAGGAGGGCAGTGAGGG...TGTTAAATTAAGAAGACTTCCAAAGCCATAAGCCTGAAGGTTGGTCCTGTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| CDS-3UTR CCA 90 bp | AGAAATTTCTGCTGGCTACACTGGCTGAATGTGAAAGTCACTGATCTGTTCTGTTGGCTCTCATGGCTCTaGAAGCTTCCCTCACTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RNFCWLHWLNVKVTDLFCWLSWL*KLPSLP Trigger: GGGCAGTGAGGGAAGCTTCCAGAGCCATGAGAGCCA...ACAGAACAGATCAGTGACTTTCACATTCAGCCAGTGTAGCCAGCAGAAATTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
||
| CDS-3UTR CCA 90 bp | TTGTTGTTCAGCTCTCACTATCTAGGTGGTCTTAGTCCCAAGGTGGTTACTGTGTCCTCTGGTTCACTGTaGCTCTCATGGCTCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LLFSSHYLGGLSPKVVTVSSGSL*LSWLWK Trigger: CTTCCAGAGCCATGAGAGCCACAGTGAACCAGAGGA...CACAGTAACCACCTTGGGACTAAGACCACCTAGATAGTGAGAGCTGAACAACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
||
| CDS-3UTR CCA 90 bp | CCTTGGGCAGTTAAGAGGGCACAGCCTATTTTCTGCATCACCTTTAAGTTGTGTTCCTCTGGTTCACTGTaGCTCTCATGGCTCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PWAVKRAQPIFCITFKLCSSGSL*LSWLWK Trigger: CTTCCAGAGCCATGAGAGCCACAGTGAACCAGAGGA...ACACAACTTAAAGGTGATGCAGAAAATAGGCTGTGCCCTCTTAACTGCCCAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| 3UTR CAA 72 bp | ACTGGAGTTTCTGGCTTGTGTGACATGGTCTGGTTGTaGTTCAGCTCTCACTATCTAGGTGGTCTTAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TGVSGLCDMVWL*FSSHYLGGLSP Trigger: GGGACTAAGACCACCTAGATAGTGAGAGCTGAACAACAACCAGACCATGTCACACAAGCCAGAAACTCCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
||
| CDS-3UTR TCA 90 bp | ACATACACACACACACACACACAGGACCAACCTTCAGGCTTATGGCTTTGGAAGCCTTTCCCAATACTCTaGCTCCTCTCTTTGTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: TYTHTHTQDQPSGLWLWKPFPIL*LLSLST Trigger: AGTGGACAAAGAGAGGAGTCAGAGTATTGGGAAAGG...CTTCCAAAGCCATAAGCCTGAAGGTTGGTCCTGTGTGTGTGTGTGTGTGTATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| CDS-3UTR GCA 90 bp | CCTTGGGCAGTTAAGAGGGCACAGCCTATTTTCTGCATCACCTTTAAGTTGTGTTCATCGTCTAGGTCCTaGACAGGACTGACACTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: PWAVKRAQPIFCITFKLCSSSRS*TGLTLL Trigger: TAGGAGTGTCAGTCCTGTGCAGGACCTAGACGATGA...ACACAACTTAAAGGTGATGCAGAAAATAGGCTGTGCCCTCTTAACTGCCCAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| CDS-3UTR CCA 90 bp | AGGGCACAGCCTATTTTCTGCATCACCTTTAAGTTGTGTGTTTGTGTGCACATGAGATCATCGTCTTCCTaGAGGGCCTTGGAGAAACCG | + |
|
Preference number: 4 (lower is better) Translates to: RAQPIFCITFKLCVCVHMRSSSS*RALEKP Trigger: CGGTTTCTCCAAGGCCCTCCAGGAAGACGATGATCT...CATGTGCACACAAACACACAACTTAAAGGTGATGCAGAAAATAGGCTGTGCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| CDS-3UTR CCA 90 bp | ACATACACACACACACACACACAGGACCAACCTTCAGGCTTATGGCTTTGGAAGCTGAGGAGTAGGAGGTaGGTGGTAAGGTGTCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TYTHTHTQDQPSGLWLWKLRSRR*VVRCLF Trigger: AAAAAGACACCTTACCACCCACCTCCTACTCCTCAG...CTTCCAAAGCCATAAGCCTGAAGGTTGGTCCTGTGTGTGTGTGTGTGTGTATGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| CDS-3UTR CCA 90 bp | AATCGTCCTTCAAGAAAGCTCCGTGGTCGGAACTGCTCTGAACAGGAGGCAATAATTTTGTATCACTCCTaGAGAAACTTGCAGGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: NRPSRKLRGRNCSEQEAIILYHS*RNLQEG Trigger: GCCCTCCTGCAAGTTTCTCCAGGAGTGATACAAAAT...TATTGCCTCCTGTTCAGAGCAGTTCCGACCACGGAGCTTTCTTGAAGGACGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
||
| CDS-3UTR CCA 90 bp | ACACACAGGACCAACCTTCAGGCTTATGGCTTTGGAAGTCTTCTTAATTTAACACCGGTCCTCCTCCTCTaGTTCACTGTGGCTCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: THRTNLQAYGFGSLLNLTPVLLL*FTVALM Trigger: CATGAGAGCCACAGTGAACCAGAGGAGGAGGACCGG...TGTTAAATTAAGAAGACTTCCAAAGCCATAAGCCTGAAGGTTGGTCCTGTGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| CDS-3UTR TCA 90 bp | AGAAATTTCTGCTGGCTACACTGGCTGAATGTGAAAGTCACTGATCTGTTCTGTCCAGATGGGTGGACCTaGTGTGCTTTGATAAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RNFCWLHWLNVKVTDLFCPDGWT*CALISL Trigger: CAGGCTTATCAAAGCACATCAGGTCCACCCATCTGG...ACAGAACAGATCAGTGACTTTCACATTCAGCCAGTGTAGCCAGCAGAAATTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
||
| CDS-3UTR CCA 90 bp | AGAAATTTCTGCTGGCTACACTGGCTGAATGTGAAAGTCACTGATCTGTTCTGTAGATCATCGTCTTCCTaGAGGGCCTTGGAGAAACCG | + |
|
Preference number: 4 (lower is better) Translates to: RNFCWLHWLNVKVTDLFCRSSSS*RALEKP Trigger: CGGTTTCTCCAAGGCCCTCCAGGAAGACGATGATCT...ACAGAACAGATCAGTGACTTTCACATTCAGCCAGTGTAGCCAGCAGAAATTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
||
| CDS-3UTR CCA 90 bp | ACATACACACACACACACACACAGGACCAACCTTCAGGCTTATGGCTTTGGAAGATTTTGTATCACTCCTaGAGAAACTTGCAGGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TYTHTHTQDQPSGLWLWKILYHS*RNLQEG Trigger: GCCCTCCTGCAAGTTTCTCCAGGAGTGATACAAAAT...CTTCCAAAGCCATAAGCCTGAAGGTTGGTCCTGTGTGTGTGTGTGTGTGTATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| CDS-3UTR CCA 90 bp | GATATTAATTGCAAACCCTTTTTGAGGACAGTACAGGAGTTGTATTGTTTGTCAAGGAGATGGAGTCGCTaGTGGGAGAGGTGCTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: DINCKPFLRTVQELYCLSRRWSR*WERCSG Trigger: CCCGGAGCACCTCTCCCACCAGCGACTCCATCTCCT...TGACAAACAATACAACTCCTGTACTGTCCTCAAAAAGGGTTTGCAATTAATATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| CDS-3UTR CCA 90 bp | ACACACAGGACCAACCTTCAGGCTTATGGCTTTGGAAGTCTTCTTAATTTAACAGTAGATGTCCTTCACTaGAAGGCGCTTGGTCGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: THRTNLQAYGFGSLLNLTVDVLH*KALGRR Trigger: TCTCCGACCAAGCGCCTTCCAGTGAAGGACATCTAC...TGTTAAATTAAGAAGACTTCCAAAGCCATAAGCCTGAAGGTTGGTCCTGTGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| 3UTR CAA 72 bp | GTAACTGGAGTTTCTGGCTTGTGTGACATGGTCTGGTaGTTGTTCAGCTCTCACTATCTAGGTGGTCTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: VTGVSGLCDMVW*LFSSHYLGGLS Trigger: ACTAAGACCACCTAGATAGTGAGAGCTGAACAACAACCAGACCATGTCACACAAGCCAGAAACTCCAGTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
||
| CDS-3UTR GCA 90 bp | ACACACAGGACCAACCTTCAGGCTTATGGCTTTGGAAGTCTTCTTAATTTAACATCATCGTCTAGGTCCTaGACAGGACTGACACTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: THRTNLQAYGFGSLLNLTSSSRS*TGLTLL Trigger: TAGGAGTGTCAGTCCTGTGCAGGACCTAGACGATGA...TGTTAAATTAAGAAGACTTCCAAAGCCATAAGCCTGAAGGTTGGTCCTGTGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| CDS-3UTR TCA 90 bp | ACACACAGGACCAACCTTCAGGCTTATGGCTTTGGAAGTCTTCTTAATTTAACACCTTTCCCAATACTCTaGCTCCTCTCTTTGTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: THRTNLQAYGFGSLLNLTPFPIL*LLSLST Trigger: AGTGGACAAAGAGAGGAGTCAGAGTATTGGGAAAGG...TGTTAAATTAAGAAGACTTCCAAAGCCATAAGCCTGAAGGTTGGTCCTGTGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| 3UTR CAA 72 bp | CCCATAACTCTCTCGAGTCTATCGTACACACTAAGTTaGCCCTCGAATTATTGCGTCGTGTTAAACACATAC | + |
|
Preference number: 4 (lower is better) Translates to: PITLSSLSYTLS*PSNYCVVLNTY Trigger: GTATGTGTTTAACACGACGCAATAATTCGAGGGCAAACTTAGTGTGTACGATAGACTCGAGAGAGTTATGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
||
| 3UTR CAA 72 bp | ATTTGCAAAAGGGTGGAGAAGGCATGTTCTCTACTTTaGCAAATGCAACACAGTGGAGGAACACTGCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: ICKRVEKACSLL*QMQHSGGTLLY Trigger: ATACAGCAGTGTTCCTCCACTGTGTTGCATTTGCAAAAGTAGAGAACATGCCTTCTCCACCCTTTTGCAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
||
| CDS-3UTR CCA 90 bp | GATATTAATTGCAAACCCTTTTTGAGGACAGTACAGGAGTTGTATTGTTTGTCAGGGCAGTGGAGGACTTaGCACTACTGTAGTTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: DINCKPFLRTVQELYCLSGQWRT*HYCSCG Trigger: ACCACAACTACAGTAGTGCCAAGTCCTCCACTGCCC...TGACAAACAATACAACTCCTGTACTGTCCTCAAAAAGGGTTTGCAATTAATATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| CDS-3UTR GCA 90 bp | GATATTAATTGCAAACCCTTTTTGAGGACAGTACAGGAGTTGTATTGTTTGTCATCATCGTCTAGGTCCTaGACAGGACTGACACTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: DINCKPFLRTVQELYCLSSSSRS*TGLTLL Trigger: TAGGAGTGTCAGTCCTGTGCAGGACCTAGACGATGA...TGACAAACAATACAACTCCTGTACTGTCCTCAAAAAGGGTTTGCAATTAATATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| 3UTR CAA 72 bp | ATCTGTACCATTTTTCTTAACAGCTACTGTCATTTCTaGGGCATGATTGCTTTTCCTTGGGCAGTTAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ICTIFLNSYCHF*GMIAFPWAVKR Trigger: CCTCTTAACTGCCCAAGGAAAAGCAATCATGCCCAAGAAATGACAGTAGCTGTTAAGAAAAATGGTACAGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| CDS-3UTR CCA 90 bp | GATATTAATTGCAAACCCTTTTTGAGGACAGTACAGGAGTTGTATTGTTTGTCAATTTTGTATCACTCCTaGAGAAACTTGCAGGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: DINCKPFLRTVQELYCLSILYHS*RNLQEG Trigger: GCCCTCCTGCAAGTTTCTCCAGGAGTGATACAAAAT...TGACAAACAATACAACTCCTGTACTGTCCTCAAAAAGGGTTTGCAATTAATATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| 3UTR CAA 72 bp | AAACCCTTTTTGAGGACAGTACAGGAGTTGTATTGTTaGTCATGTTTTTGCTTTGTTGAGTCCATCAATGTG | + |
|
Preference number: 4 (lower is better) Translates to: KPFLRTVQELYC*SCFCFVESINV Trigger: CACATTGATGGACTCAACAAAGCAAAAACATGACAAACAATACAACTCCTGTACTGTCCTCAAAAAGGGTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| 3UTR CAA 72 bp | GCAAAAATGAGTACTGATATTAATTGCAAACCCTTTTaGAGGACAGTACAGGAGTTGTATTGTTTGTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: AKMSTDINCKPF*RTVQELYCLSC Trigger: ACATGACAAACAATACAACTCCTGTACTGTCCTCAAAAAGGGTTTGCAATTAATATCAGTACTCATTTTTGC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| CDS-3UTR CAA 90 bp | AGAGCATGGGGTTATCCTCTAGGGGACAAGGGCTCTTCAGTCTCTGTAACTGCTTCTTCCTGGAGGGCCTaGGAGAAACCGCTGCCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: RAWGYPLGDKGSSVSVTASSWRA*EKPLPR Trigger: CCGGGGCAGCGGTTTCTCCAAGGCCCTCCAGGAAGA...AGCAGTTACAGAGACTGAAGAGCCCTTGTCCCCTAGAGGATAACCCCATGCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| CDS-3UTR CAA 90 bp | AATCGTCCTTCAAGAAAGCTCCGTGGTCGGAACTGCTCTGAACAGGAGGCAATATCTTCCTGGAGGGCCTaGGAGAAACCGCTGCCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: NRPSRKLRGRNCSEQEAISSWRA*EKPLPR Trigger: CCGGGGCAGCGGTTTCTCCAAGGCCCTCCAGGAAGA...TATTGCCTCCTGTTCAGAGCAGTTCCGACCACGGAGCTTTCTTGAAGGACGATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046859.12 |
||
| CDS-3UTR CAA 90 bp | TGCCAGGGCCAGAGCATGGGGTTATCCTCTAGGGGACAAGGGCTCTTCAGTCTCTTTTGCGGTTTCCTTTaGTTCTTTCTGCCCCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: CQGQSMGLSSRGQGLFSLFCGFL*FFLPLG Trigger: GCCAAGGGGCAGAAAGAACAAAAGGAAACCGCAAAA...GAGACTGAAGAGCCCTTGTCCCCTAGAGGATAACCCCATGCTCTGGCCCTGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| CDS-3UTR CAA 90 bp | GGAGGACTTGGCACTACTGTAGTTGTGGTCCTCCTTCGGATCGCCACTGACCACATCAATGTCAGGATCTaGCAGGAGGGCTCCGTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GGLGTTVVVVLLRIATDHINVRI*QEGSVS Trigger: AGAAACGGAGCCCTCCTGCAAGATCCTGACATTGAT...GTGGTCAGTGGCGATCCGAAGGAGGACCACAACTACAGTAGTGCCAAGTCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222458.2 |
||
| CDS-3UTR CAA 90 bp | GATATTAATTGCAAACCCTTTTTGAGGACAGTACAGGAGTTGTATTGTTTGTCATCTTCCTGGAGGGCCTaGGAGAAACCGCTGCCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: DINCKPFLRTVQELYCLSSSWRA*EKPLPR Trigger: CCGGGGCAGCGGTTTCTCCAAGGCCCTCCAGGAAGA...TGACAAACAATACAACTCCTGTACTGTCCTCAAAAAGGGTTTGCAATTAATATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||
| CDS-3UTR CAA 90 bp | ACATACACACACACACACACACAGGACCAACCTTCAGGCTTATGGCTTTGGAAGTTTTGCGGTTTCCTTTaGTTCTTTCTGCCCCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: TYTHTHTQDQPSGLWLWKFCGFL*FFLPLG Trigger: GCCAAGGGGCAGAAAGAACAAAAGGAAACCGCAAAA...CTTCCAAAGCCATAAGCCTGAAGGTTGGTCCTGTGTGTGTGTGTGTGTGTATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046859.12 ENSMUST00000085108.8 ENSMUST00000177451.8 |
||