Pregenerated sensors for FOXN2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034998Ensembl transcript IDs: ENSMUST00000112238.9, ENSMUST00000141052.2, ENSMUST00000155640.2
Found 145 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTTGCCTGGCTGCCCTTTCAGAGTACTGTGTCCACGAGCTTGCGGTaGGTAGCCACTGTCTCCCAGAGGATCCTCCTCGTCCTCCGCATC | + |
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Preference number: 1 (lower is better) Translates to: FAWLPFQSTVSTSLR*VATVSQRILLVLRI Trigger: GATGCGGAGGACGAGGAGGATCCTCTGGGAGACAGTGGCTACGCACCGCAAGCTCGTGGACACAGTACTCTGAAAGGGCAGCCAGGCAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141052.2 |
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| 3UTR TCA 90 bp | AACAGACTTAGAAAGAAACAAGTGGCCCCCTCCCCCACCCTCAGCTaGAGAGGTCCGTCCGTCCGTCCGTCCGCTATGGCTCTGACATCC | + |
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Preference number: 1 (lower is better) Translates to: NRLRKKQVAPSPTLS*RGPSVRPSAMALTS Trigger: GGATGTCAGAGCCATAGCGGACGGACGGACGGACGGACCTCTTCAGCTGAGGGTGGGGGAGGGGGCCACTTGTTTCTTTCTAAGTCTGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000112238.9 ENSMUST00000141052.2 |
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| 3UTR CCA 90 bp | GTCTCCTCGTCGCTGTGGAAGCCTTCGCTACCGTCGCTCCCGCCGTaGCTGCTCTTTGGGATGAATTCATACACCTCATCCACAGAGGAC | + |
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Preference number: 1 (lower is better) Translates to: VSSSLWKPSLPSLPP*LLFGMNSYTSSTED Trigger: GTCCTCTGTGGATGAGGTGTATGAATTCATCCCAAAGAGCAGCCACGGCGGGAGCGACGGTAGCGAAGGCTTCCACAGCGACGAGGAGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141052.2 |
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| 3UTR TCA 90 bp | GGAAGCCTTCGCTACCGTCGCTCCCGCCGTGGCTGCTCTTTGGGATaGATTCATACACCTCATCCACAGAGGACAGAGAAGACATGCTCG | + |
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Preference number: 1 (lower is better) Translates to: GSLRYRRSRRGCSLG*IHTPHPQRTEKTCS Trigger: CGAGCATGTCTTCTCTGTCCTCTGTGGATGAGGTGTATGAATTCATCCCAAAGAGCAGCCACGGCGGGAGCGACGGTAGCGAAGGCTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141052.2 |
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| 3UTR GCA 90 bp | ACCAAGGCAGGTGCGGATTCCAGCAAGGTGGAGCAGCGACCCGGCTaGCTCTTTGAGCTCCTCATCAATCTCTTGACAGGACTGTTTTGG | + |
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Preference number: 1 (lower is better) Translates to: TKAGADSSKVEQRPG*LFELLINLLTGLFW Trigger: CCAAAACAGTCCTGTCAAGAGATTGATGAGGAGCTCAAAGAGGCAGCCGGGTCGCTGCTCCACCTTGCTGGAATCCGCACCTGCCTTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141052.2 |
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| 3UTR CCA 90 bp | ATTCATACACCTCATCCACAGAGGACAGAGAAGACATGCTCGCCCTaGATGCGCAGCGCTGGGCCGCCACGCTGTTGGCACTGTAGTTAT | + |
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Preference number: 1 (lower is better) Translates to: IHTPHPQRTEKTCSP*MRSAGPPRCWHCSY Trigger: ATAACTACAGTGCCAACAGCGTGGCGGCCCAGCGCTGCGCATCCAGGGCGAGCATGTCTTCTCTGTCCTCTGTGGATGAGGTGTATGAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141052.2 |
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| 3UTR CCA 90 bp | GCTGTGGAAGCCTTCGCTACCGTCGCTCCCGCCGTGGCTGCTCTTTaGGATGAATTCATACACCTCATCCACAGAGGACAGAGAAGACAT | + |
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Preference number: 1 (lower is better) Translates to: AVEAFATVAPAVAAL*DEFIHLIHRGQRRH Trigger: ATGTCTTCTCTGTCCTCTGTGGATGAGGTGTATGAATTCATCCCAAAGAGCAGCCACGGCGGGAGCGACGGTAGCGAAGGCTTCCACAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141052.2 |
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| 3UTR TCA 90 bp | TGGAGCAGCGACCCGGCTGCCTCTTTGAGCTCCTCATCAATCTCTTaGCAGGACTGTTTTGGGATCTTTTTGCCTGGCTGCCCTTTCAGA | + |
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Preference number: 1 (lower is better) Translates to: WSSDPAASLSSSSIS*QDCFGIFLPGCPFR Trigger: TCTGAAAGGGCAGCCAGGCAAAAAGATCCCAAAACAGTCCTGTCAAGAGATTGATGAGGAGCTCAAAGAGGCAGCCGGGTCGCTGCTCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141052.2 |
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| 3UTR GCA 90 bp | TTCACACTCTGCGCATGTCTACTTTTCCCGGTGCTTCTGACTCTGTaGCTTCGCAGTACTTATCAGGGAACCAAGGCAGGTGCGGATTCC | + |
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Preference number: 1 (lower is better) Translates to: FTLCACLLFPVLLTL*LRSTYQGTKAGADS Trigger: GGAATCCGCACCTGCCTTGGTTCCCTGATAAGTACTGCGAAGGCACAGAGTCAGAAGCACCGGGAAAAGTAGACATGCGCAGAGTGTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141052.2 |
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| 3UTR TCA 90 bp | AGAGTAACTTCACACTCTGCGCATGTCTACTTTTCCCGGTGCTTCTaGCTCTGTGCCTTCGCAGTACTTATCAGGGAACCAAGGCAGGTG | + |
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Preference number: 1 (lower is better) Translates to: RVTSHSAHVYFSRCF*LCAFAVLIREPRQV Trigger: CACCTGCCTTGGTTCCCTGATAAGTACTGCGAAGGCACAGAGTCAGAAGCACCGGGAAAAGTAGACATGCGCAGAGTGTGAAGTTACTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141052.2 |
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| 3UTR CCA 90 bp | GGCTGCCTCTTTGAGCTCCTCATCAATCTCTTGACAGGACTGTTTTaGGATCTTTTTGCCTGGCTGCCCTTTCAGAGTACTGTGTCCACG | + |
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Preference number: 1 (lower is better) Translates to: GCLFELLINLLTGLF*DLFAWLPFQSTVST Trigger: CGTGGACACAGTACTCTGAAAGGGCAGCCAGGCAAAAAGATCCCAAAACAGTCCTGTCAAGAGATTGATGAGGAGCTCAAAGAGGCAGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141052.2 |
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| 3UTR TCA 90 bp | TGGAGAGTTTGCACTTGGCTTTGCTTGAGAGCAGAGCTTAAGCAGTaGGGTGATAAAGCAGCACTTTGTGGAGAAGAAAAAGGCTGCTTC | + |
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Preference number: 1 (lower is better) Translates to: WRVCTWLCLRAELKQ*GDKAALCGEEKGCF Trigger: GAAGCAGCCTTTTTCTTCTCCACAAAGTGCTGCTTTATCACCTCACTGCTTAAGCTCTGCTCTCAAGCAAAGCCAAGTGCAAACTCTCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141052.2 |
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| 3UTR TCA 90 bp | CTGCATCAATGTCAGATTCTTGGAGAGTTTGCACTTGGCTTTGCTTaGGAGCAGAGCTTAAGCAGTGAGGTGATAAAGCAGCACTTTGTG | + |
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Preference number: 1 (lower is better) Translates to: LHQCQILGEFALGFA*EQSLSSEVIKQHFV Trigger: CACAAAGTGCTGCTTTATCACCTCACTGCTTAAGCTCTGCTCTCAAGCAAAGCCAAGTGCAAACTCTCCAAGAATCTGACATTGATGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141052.2 |
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| 3UTR TCA 90 bp | TTGAACTACGCTAATGCTAACATGTATCTAACTGACCATCTAGTATaGACCCTTTACATAATGCCTCAGAAAGCACTGAGAACATATGCT | + |
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Preference number: 1 (lower is better) Translates to: LNYANANMYLTDHLV*TLYIMPQKALRTYA Trigger: AGCATATGTTCTCAGTGCTTTCTGAGGCATTATGTAAAGGGTTCATACTAGATGGTCAGTTAGATACATGTTAGCATTAGCGTAGTTCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
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| 3UTR GCA 90 bp | AGTATGAACCCTTTACATAATGCCTCAGAAAGCACTGAGAACATATaGTCAACTTTACAATGTACAAAGGAATCCCAGTCAAGAGAAGTA | + |
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Preference number: 1 (lower is better) Translates to: SMNPLHNASESTENI*STLQCTKESQSREV Trigger: TACTTCTCTTGACTGGGATTCCTTTGTACATTGTAAAGTTGAGCATATGTTCTCAGTGCTTTCTGAGGCATTATGTAAAGGGTTCATACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
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| 3UTR-3UTR TCA 90 bp | GTTGGAGACGGGCTCTCCTGCAGTCGCACAGCACCGGGGGCACTGAACGCGCTGGCAGAGCTTAAGCAGTaGGGTGATAAAGCAGCACTT | + |
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Preference number: 2 (lower is better) Translates to: VGDGLSCSRTAPGALNALAELKQ*GDKAAL Trigger: AAGTGCTGCTTTATCACCTCACTGCTTAAGCTCTGC...CAGCGCGTTCAGTGCCCCCGGTGCTGTGCGACTGCAGGAGAGCCCGTCTCCAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141052.2 |
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| 3UTR-3UTR TCA 90 bp | GGAACCAAGGCAGGTGCGGATTCCAGCAAGGTGGAGCAGCGACCCGGCTGCCTCGGCTGCTCTTTGGGATaGATTCATACACCTCATCCA | + |
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Preference number: 2 (lower is better) Translates to: GTKAGADSSKVEQRPGCLGCSLG*IHTPHP Trigger: TGGATGAGGTGTATGAATTCATCCCAAAGAGCAGCC...GAGGCAGCCGGGTCGCTGCTCCACCTTGCTGGAATCCGCACCTGCCTTGGTTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141052.2 |
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| 3UTR CAA 90 bp | GATCTTTTTGCCTGGCTGCCCTTTCAGAGTACTGTGTCCACGAGCTaGCGGTGCGTAGCCACTGTCTCCCAGAGGATCCTCCTCGTCCTC | + |
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Preference number: 2 (lower is better) Translates to: DLFAWLPFQSTVSTS*RCVATVSQRILLVL Trigger: GAGGACGAGGAGGATCCTCTGGGAGACAGTGGCTACGCACCGCAAGCTCGTGGACACAGTACTCTGAAAGGGCAGCCAGGCAAAAAGATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141052.2 |
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| 3UTR-3UTR TCA 90 bp | CCAAGGCAGGTGCGGATTCCAGCAAGGTGGAGCAGCGACCCGGCTGCCTCTTTGCCTCTTCTTCTGCAGTaGTGTTTTAAGAGGCAGTGG | + |
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Preference number: 2 (lower is better) Translates to: PRQVRIPARWSSDPAASLPLLLQ*CFKRQW Trigger: CCACTGCCTCTTAAAACATCACTGCAGAAGAAGAGG...CAAAGAGGCAGCCGGGTCGCTGCTCCACCTTGCTGGAATCCGCACCTGCCTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141052.2 |
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| 3UTR-3UTR CCA 90 bp | TTGCGGTGCGTAGCCACTGTCTCCCAGAGGATCCTCCTCGTCCTCCGCATCCGTTGGAGAGTTTGCACTTaGCTTTGCTTGAGAGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: LRCVATVSQRILLVLRIRWRVCT*LCLRAE Trigger: CTCTGCTCTCAAGCAAAGCCAAGTGCAAACTCTCCA...ACGGATGCGGAGGACGAGGAGGATCCTCTGGGAGACAGTGGCTACGCACCGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141052.2 |
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| 3UTR-3UTR TCA 90 bp | CCCGGTGCTTCTGACTCTGTGCCTTCGCAGTACTTATCAGGGAACCAAGGCAGGACCCGGCTGCCTCTTTaGGCTCCTCATCAATCTCTT | + |
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Preference number: 2 (lower is better) Translates to: PGASDSVPSQYLSGNQGRTRLPL*APHQSL Trigger: AAGAGATTGATGAGGAGCTCAAAGAGGCAGCCGGGT...CCTGCCTTGGTTCCCTGATAAGTACTGCGAAGGCACAGAGTCAGAAGCACCGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141052.2 |
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| 3UTR CAA 90 bp | GTGGAGCAGCGACCCGGCTGCCTCTTTGAGCTCCTCATCAATCTCTaGACAGGACTGTTTTGGGATCTTTTTGCCTGGCTGCCCTTTCAG | + |
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Preference number: 2 (lower is better) Translates to: VEQRPGCLFELLINL*TGLFWDLFAWLPFQ Trigger: CTGAAAGGGCAGCCAGGCAAAAAGATCCCAAAACAGTCCTGTCAAGAGATTGATGAGGAGCTCAAAGAGGCAGCCGGGTCGCTGCTCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141052.2 |
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| 3UTR-3UTR CCA 90 bp | GGTGCTTCTGACTCTGTGCCTTCGCAGTACTTATCAGGGAACCAAGGCAGGTGCTTAGAAAGAAACAAGTaGCCCCCTCCCCCACCCTCA | + |
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Preference number: 2 (lower is better) Translates to: GASDSVPSQYLSGNQGRCLERNK*PPPPPS Trigger: TGAGGGTGGGGGAGGGGGCCACTTGTTTCTTTCTAA...GCACCTGCCTTGGTTCCCTGATAAGTACTGCGAAGGCACAGAGTCAGAAGCACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000141052.2 |
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| 3UTR-3UTR CCA 90 bp | TCCACAGAGGACAGAGAAGACATGCTCGCCCTGGATGCGCAGCGCTGGGCCGCCAAAGTATCATTGCAGTaGCTGCATCAATGTCAGATT | + |
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Preference number: 2 (lower is better) Translates to: STEDREDMLALDAQRWAAKVSLQ*LHQCQI Trigger: AATCTGACATTGATGCAGCCACTGCAATGATACTTT...GGCGGCCCAGCGCTGCGCATCCAGGGCGAGCATGTCTTCTCTGTCCTCTGTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141052.2 |
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| 3UTR-3UTR TCA 90 bp | GGTGCTTCTGACTCTGTGCCTTCGCAGTACTTATCAGGGAACCAAGGCAGGTGCGCACTTGGCTTTGCTTaGGAGCAGAGCTTAAGCAGT | + |
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Preference number: 2 (lower is better) Translates to: GASDSVPSQYLSGNQGRCALGFA*EQSLSS Trigger: ACTGCTTAAGCTCTGCTCTCAAGCAAAGCCAAGTGC...GCACCTGCCTTGGTTCCCTGATAAGTACTGCGAAGGCACAGAGTCAGAAGCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141052.2 |
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| 3UTR-3UTR GCA 90 bp | CTACTGAAAAGGCCTCCAGTCTACAAGACACAAGCATTCCCTCAACGCCTGCTCATTTGCAGAACAACATaGCCGCTGCACAGGGCCTTG | + |
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Preference number: 2 (lower is better) Translates to: LLKRPPVYKTQAFPQRLLICRTT*PLHRAL Trigger: CAAGGCCCTGTGCAGCGGGCATGTTGTTCTGCAAAT...GAGCAGGCGTTGAGGGAATGCTTGTGTCTTGTAGACTGGAGGCCTTTTCAGTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
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| 3UTR-3UTR GCA 90 bp | CTACTGAAAAGGCCTCCAGTCTACAAGACACAAGCATTCCCTCAACGCCTGCTCCCCCTTGAAGGAGGATaGTTAGACACAGCAGCAAAT | + |
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Preference number: 2 (lower is better) Translates to: LLKRPPVYKTQAFPQRLLPLEGG*LDTAAN Trigger: ATTTGCTGCTGTGTCTAAGCATCCTCCTTCAAGGGG...GAGCAGGCGTTGAGGGAATGCTTGTGTCTTGTAGACTGGAGGCCTTTTCAGTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
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| 3UTR CAA 90 bp | GCTGAGAACAACTCTTTCCTCCTACTTCAGACCATTTTCCTCCATTaGCAGAACAACATGCCCGCTGCACAGGGCCTTGAGAGACATACT | + |
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Preference number: 2 (lower is better) Translates to: AENNSFLLLQTIFLH*QNNMPAAQGLERHT Trigger: AGTATGTCTCTCAAGGCCCTGTGCAGCGGGCATGTTGTTCTGCAAATGGAGGAAAATGGTCTGAAGTAGGAGGAAAGAGTTGTTCTCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
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| 3UTR-3UTR CCA 90 bp | CTACTGAAAAGGCCTCCAGTCTACAAGACACAAGCATTCCCTCAACGCCTGCTCGAATTAGTCTTAAGATaGCCACATCCCCAAATGGCC | + |
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Preference number: 2 (lower is better) Translates to: LLKRPPVYKTQAFPQRLLELVLR*PHPQMA Trigger: GGCCATTTGGGGATGTGGCCATCTTAAGACTAATTC...GAGCAGGCGTTGAGGGAATGCTTGTGTCTTGTAGACTGGAGGCCTTTTCAGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
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| 3UTR-3UTR TCA 90 bp | CTACTGAAAAGGCCTCCAGTCTACAAGACACAAGCATTCCCTCAACGCCTGCTCAGCAGGAAACTAACCTaGGCCTATGTATGTTGCATA | + |
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Preference number: 2 (lower is better) Translates to: LLKRPPVYKTQAFPQRLLSRKLT*AYVCCI Trigger: TATGCAACATACATAGGCTCAGGTTAGTTTCCTGCT...GAGCAGGCGTTGAGGGAATGCTTGTGTCTTGTAGACTGGAGGCCTTTTCAGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
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| 3UTR-3UTR TCA 90 bp | CATATGCTCAACTTTACAATGTACAAAGGAATCCCAGTCAAGAGAAGTAGAGCTCCCAGAAGGGCGTGGTaGCCTGCTTCACAATTCCCT | + |
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Preference number: 2 (lower is better) Translates to: HMLNFTMYKGIPVKRSRAPRRAW*PASQFP Trigger: AGGGAATTGTGAAGCAGGTCACCACGCCCTTCTGGG...AGCTCTACTTCTCTTGACTGGGATTCCTTTGTACATTGTAAAGTTGAGCATATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
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| 3UTR-3UTR TCA 90 bp | CTACTGAAAAGGCCTCCAGTCTACAAGACACAAGCATTCCCTCAACGCCTGCTCTTCATTACAGTACGCTaGGAAAACAAATGCAAGGAT | + |
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Preference number: 2 (lower is better) Translates to: LLKRPPVYKTQAFPQRLLFITVR*ENKCKD Trigger: ATCCTTGCATTTGTTTTCTCAGCGTACTGTAATGAA...GAGCAGGCGTTGAGGGAATGCTTGTGTCTTGTAGACTGGAGGCCTTTTCAGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
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| 3UTR CAA 90 bp | CTTTGTGGAGAAGAAAAAGGCTGCTTCTTTAAGGCCTGCATAAGATaGGGCTTATATTCTGGATCAACGCACCACAAGGAGCCTTTTCCA | + |
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Preference number: 2 (lower is better) Translates to: LCGEEKGCFFKACIR*GLYSGSTHHKEPFP Trigger: TGGAAAAGGCTCCTTGTGGTGCGTTGATCCAGAATATAAGCCCAATCTTATGCAGGCCTTAAAGAAGCAGCCTTTTTCTTCTCCACAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141052.2 |
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| 3UTR-3UTR TCA 90 bp | TTGCACAAATTTCAAAGTCATACTCAAGAAACACTGATTCTCTTGGCAAAGTGGCCAGCTTTAAATCACTaGGACCTGGGCTGTCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: LHKFQSHTQETLILLAKWPALNH*DLGCPW Trigger: CCAGGGACAGCCCAGGTCTCAGTGATTTAAAGCTGG...CCACTTTGCCAAGAGAATCAGTGTTTCTTGAGTATGACTTTGAAATTTGTGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
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| 3UTR-3UTR GCA 90 bp | CATATGCTCAACTTTACAATGTACAAAGGAATCCCAGTCAAGAGAAGTAGAGCTCCCATTCCACCCTTCTaGAGTGTGTCAGGAGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: HMLNFTMYKGIPVKRSRAPIPPF*SVSGEK Trigger: CTTCTCTCCTGACACACTGCAGAAGGGTGGAATGGG...AGCTCTACTTCTCTTGACTGGGATTCCTTTGTACATTGTAAAGTTGAGCATATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
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| 3UTR-3UTR GCA 90 bp | TTACAATGTACAAAGGAATCCCAGTCAAGAGAAGTAGAGCTGGCTATGAGAGCACCATTTTCCTCCATTTaGAGAACAACATGCCCGCTG | + |
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Preference number: 2 (lower is better) Translates to: LQCTKESQSREVELAMRAPFSSI*RTTCPL Trigger: CAGCGGGCATGTTGTTCTGCAAATGGAGGAAAATGG...TGCTCTCATAGCCAGCTCTACTTCTCTTGACTGGGATTCCTTTGTACATTGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
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| 3UTR-3UTR GCA 90 bp | GCTCTTTGGGATGAATTCATACACCTCATCCACAGAGGACAGAGAAGACATGCTGGAGAAGAAAAAGGCTaGTTCTTTAAGGCCTGCATA | + |
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Preference number: 2 (lower is better) Translates to: ALWDEFIHLIHRGQRRHAGEEKG*FFKACI Trigger: TATGCAGGCCTTAAAGAAGCAGCCTTTTTCTTCTCC...AGCATGTCTTCTCTGTCCTCTGTGGATGAGGTGTATGAATTCATCCCAAAGAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141052.2 |
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| 3UTR-3UTR CCA 90 bp | TTACAATGTACAAAGGAATCCCAGTCAAGAGAAGTAGAGCTGGCTATGAGAGCAGGCCACATCCCCAAATaGCCTTTCCTAATCCTTAGA | + |
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Preference number: 2 (lower is better) Translates to: LQCTKESQSREVELAMRAGHIPK*PFLILR Trigger: TCTAAGGATTAGGAAAGGCCATTTGGGGATGTGGCC...TGCTCTCATAGCCAGCTCTACTTCTCTTGACTGGGATTCCTTTGTACATTGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
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| 3UTR-3UTR GCA 90 bp | GGCTGCATCAATGTCAGATTCTTGGAGAGTTTGCACTTGGCTTTGCTTGAGAGCTGCTTCTTTAAGGCCTaGATAAGATTGGGCTTATAT | + |
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Preference number: 2 (lower is better) Translates to: GCINVRFLESLHLALLESCFFKA*IRLGLY Trigger: ATATAAGCCCAATCTTATGCAGGCCTTAAAGAAGCA...GCTCTCAAGCAAAGCCAAGTGCAAACTCTCCAAGAATCTGACATTGATGCAGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141052.2 |
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| 3UTR-3UTR CCA 90 bp | GCACAAATTTCAAAGTCATACTCAAGAAACACTGATTCTCTTGGCAAAGTGGAATTAGAAAGAAACAAGTaGCCCCCTCCCCCACCCTCA | + |
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Preference number: 2 (lower is better) Translates to: AQISKSYSRNTDSLGKVELERNK*PPPPPS Trigger: TGAGGGTGGGGGAGGGGGCCACTTGTTTCTTTCTAA...TTCCACTTTGCCAAGAGAATCAGTGTTTCTTGAGTATGACTTTGAAATTTGTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
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| 3UTR-3UTR CCA 90 bp | ATTCCCTCAACGCCTGCTCCAGCTTTGAACTACGCTAATGCTAACATGTATCTACCTAAACACGAATTCTaGAGAGGTCTTTCTCTTGGA | + |
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Preference number: 2 (lower is better) Translates to: IPSTPAPALNYANANMYLPKHEF*RGLSLG Trigger: TCCAAGAGAAAGACCTCTCCAGAATTCGTGTTTAGG...TAGATACATGTTAGCATTAGCGTAGTTCAAAGCTGGAGCAGGCGTTGAGGGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
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| 3UTR-3UTR GCA 90 bp | TTGCACAAATTTCAAAGTCATACTCAAGAAACACTGATTCTCTTGGCAAAGTGGTTGAGTGCACGGGCATaGATCATCCTTGCTAATGGC | + |
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Preference number: 2 (lower is better) Translates to: LHKFQSHTQETLILLAKWLSARA*IILANG Trigger: GCCATTAGCAAGGATGATGCATGCCCGTGCACTCAA...CCACTTTGCCAAGAGAATCAGTGTTTCTTGAGTATGACTTTGAAATTTGTGCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
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| 3UTR-3UTR TCA 90 bp | TTACAATGTACAAAGGAATCCCAGTCAAGAGAAGTAGAGCTGGCTATGAGAGCAGAATGGGAAGAAAAATaGAAAGTCCGAGTTACCAAT | + |
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Preference number: 2 (lower is better) Translates to: LQCTKESQSREVELAMRAEWEEK*KVRVTN Trigger: ATTGGTAACTCGGACTTTTCATTTTTCTTCCCATTC...TGCTCTCATAGCCAGCTCTACTTCTCTTGACTGGGATTCCTTTGTACATTGTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
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| 3UTR-3UTR TCA 90 bp | GCACAAATTTCAAAGTCATACTCAAGAAACACTGATTCTCTTGGCAAAGTGGAATCTTTCTCTTGGAGCTaGGAACAACTCTTTCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: AQISKSYSRNTDSLGKVESFSWS*EQLFPP Trigger: AGGAGGAAAGAGTTGTTCTCAGCTCCAAGAGAAAGA...TTCCACTTTGCCAAGAGAATCAGTGTTTCTTGAGTATGACTTTGAAATTTGTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
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| 3UTR-3UTR CCA 90 bp | CATATGCTCAACTTTACAATGTACAAAGGAATCCCAGTCAAGAGAAGTAGAGCTCTTCACACTTCTGCTTaGTGTTTTATTCACTGCAGT | + |
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Preference number: 2 (lower is better) Translates to: HMLNFTMYKGIPVKRSRALHTSA*CFIHCS Trigger: ACTGCAGTGAATAAAACACCAAGCAGAAGTGTGAAG...AGCTCTACTTCTCTTGACTGGGATTCCTTTGTACATTGTAAAGTTGAGCATATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
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| 3UTR-3UTR TCA 90 bp | CATATGCTCAACTTTACAATGTACAAAGGAATCCCAGTCAAGAGAAGTAGAGCTGTTTTTCTTCTCATTTaGCAGTATTGCCCAGAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: HMLNFTMYKGIPVKRSRAVFLLI*QYCPER Trigger: TCTTTCTGGGCAATACTGTCAAATGAGAAGAAAAAC...AGCTCTACTTCTCTTGACTGGGATTCCTTTGTACATTGTAAAGTTGAGCATATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
||
| 3UTR-3UTR GCA 90 bp | TTGCACAAATTTCAAAGTCATACTCAAGAAACACTGATTCTCTTGGCAAAGTGGCACACTTCACACTTCTaGTTGGTGTTTTATTCACTG | + |
|
Preference number: 2 (lower is better) Translates to: LHKFQSHTQETLILLAKWHTSHF*LVFYSL Trigger: CAGTGAATAAAACACCAAGCAGAAGTGTGAAGTGTG...CCACTTTGCCAAGAGAATCAGTGTTTCTTGAGTATGACTTTGAAATTTGTGCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
||
| 3UTR CAA 90 bp | ATATTGCACAAATTTCAAAGTCATACTCAAGAAACACTGATTCTCTaGGCAAAGTGGAAAATGAAGCTAACAGTGCTAAGTAGGACACAA | + |
|
Preference number: 2 (lower is better) Translates to: ILHKFQSHTQETLIL*AKWKMKLTVLSRTQ Trigger: TTGTGTCCTACTTAGCACTGTTAGCTTCATTTTCCACTTTGCCAAGAGAATCAGTGTTTCTTGAGTATGACTTTGAAATTTGTGCAATAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
||
| 3UTR CCA 72 bp | CCTCATCCACAGAGGACAGAGAAGACATGCTCGCCCTaGATGCGCAGCGCTGGGCCGCCACGCTGTTGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: PHPQRTEKTCSP*MRSAGPPRCWH Trigger: GTGCCAACAGCGTGGCGGCCCAGCGCTGCGCATCCAGGGCGAGCATGTCTTCTCTGTCCTCTGTGGATGAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141052.2 |
||
| 3UTR TCA 72 bp | ACGGGCTCTCCTGCAGTCGCACAGCACCGGGGGCACTaGACGCGCTGCCGTAACTCCTCTTCTTCTGCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: TGSPAVAQHRGH*TRCRNSSSSAV Trigger: CACTGCAGAAGAAGAGGAGTTACGGCAGCGCGTTCAGTGCCCCCGGTGCTGTGCGACTGCAGGAGAGCCCGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141052.2 |
||
| 3UTR GCA 72 bp | ATCCACAGAGGACAGAGAAGACATGCTCGCCCTGGATaGGCAGCGCTGGGCCGCCACGCTGTTGGCACTGTA | + |
|
Preference number: 3 (lower is better) Translates to: IHRGQRRHARPG*AALGRHAVGTV Trigger: TACAGTGCCAACAGCGTGGCGGCCCAGCGCTGCGCATCCAGGGCGAGCATGTCTTCTCTGTCCTCTGTGGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141052.2 |
||
| 3UTR GCA 72 bp | GTGCCTTCGCAGTACTTATCAGGGAACCAAGGCAGGTaGGGATTCCAGCAAGGTGGAGCAGCGACCCGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: VPSQYLSGNQGR*GFQQGGAATRL Trigger: CAGCCGGGTCGCTGCTCCACCTTGCTGGAATCCGCACCTGCCTTGGTTCCCTGATAAGTACTGCGAAGGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141052.2 |
||
| 3UTR GCA 72 bp | CTGCCCTTTCAGAGTACTGTGTCCACGAGCTTGCGGTaGGTAGCCACTGTCTCCCAGAGGATCCTCCTCGTC | + |
|
Preference number: 3 (lower is better) Translates to: LPFQSTVSTSLR*VATVSQRILLV Trigger: GACGAGGAGGATCCTCTGGGAGACAGTGGCTACGCACCGCAAGCTCGTGGACACAGTACTCTGAAAGGGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141052.2 |
||
| 3UTR TCA 72 bp | CGCTACCGTCGCTCCCGCCGTGGCTGCTCTTTGGGATaGATTCATACACCTCATCCACAGAGGACAGAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: RYRRSRRGCSLG*IHTPHPQRTEK Trigger: CTTCTCTGTCCTCTGTGGATGAGGTGTATGAATTCATCCCAAAGAGCAGCCACGGCGGGAGCGACGGTAGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141052.2 |
||
| 3UTR GCA 72 bp | TGCGCATGTCTACTTTTCCCGGTGCTTCTGACTCTGTaGCTTCGCAGTACTTATCAGGGAACCAAGGCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: CACLLFPVLLTL*LRSTYQGTKAG Trigger: ACCTGCCTTGGTTCCCTGATAAGTACTGCGAAGGCACAGAGTCAGAAGCACCGGGAAAAGTAGACATGCGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141052.2 |
||
| 3UTR-3UTR CAA 90 bp | TTACAATGTACAAAGGAATCCCAGTCAAGAGAAGTAGAGCTGGCTATGAGAGCACCGCTGCACAGGGCCTaGAGAGACATACTGCTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: LQCTKESQSREVELAMRAPLHRA*RDILLV Trigger: CACCAGCAGTATGTCTCTCAAGGCCCTGTGCAGCGG...TGCTCTCATAGCCAGCTCTACTTCTCTTGACTGGGATTCCTTTGTACATTGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
||
| 3UTR TCA 72 bp | AAGCTGCTGTCCATCTGGGACAACAGCCTAAGCTACTaGAAAGGCCTCCAGTCTACAAGACACAAGCATTCC | + |
|
Preference number: 3 (lower is better) Translates to: KLLSIWDNSLSY*KGLQSTRHKHS Trigger: GGAATGCTTGTGTCTTGTAGACTGGAGGCCTTTTCAGTAGCTTAGGCTGTTGTCCCAGATGGACAGCAGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
||
| 3UTR-3UTR CAA 90 bp | GTGCACGGGCATGCATCATCCTTGCTAATGGCTGTTGCTTTAAGTAAGAGGCCAACCATTTTCCTCCATTaGCAGAACAACATGCCCGCT | + |
|
Preference number: 3 (lower is better) Translates to: VHGHASSLLMAVALSKRPTIFLH*QNNMPA Trigger: AGCGGGCATGTTGTTCTGCAAATGGAGGAAAATGGT...TGGCCTCTTACTTAAAGCAACAGCCATTAGCAAGGATGATGCATGCCCGTGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
||
| 3UTR GCA 72 bp | ACCCAGAAGGGCGTGGTGACCTGCTTCACAATTCCCTaGTATCCACTGAACTCTACCATCTCTTTAAGACTT | + |
|
Preference number: 3 (lower is better) Translates to: TQKGVVTCFTIP*YPLNSTISLRL Trigger: AAGTCTTAAAGAGATGGTAGAGTTCAGTGGATAGCAGGGAATTGTGAAGCAGGTCACCACGCCCTTCTGGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
||
| 3UTR GCA 72 bp | CATCAATCTCTTGACAGGACTGTTTTGGGATCTTTTTaGCTGGCTGCCCTTTCAGAGTACTGTGTCCACGAG | + |
|
Preference number: 3 (lower is better) Translates to: HQSLDRTVLGSF*LAALSEYCVHE Trigger: CTCGTGGACACAGTACTCTGAAAGGGCAGCCAGGCAAAAAGATCCCAAAACAGTCCTGTCAAGAGATTGATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141052.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTGAGCTCCTCATCAATCTCTTGACAGGACTGTTTTGGGATCTTTTTGCCTGGTGCACTTGGCTTTGCTaGAGAGCAGAGCTTAAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: FELLINLLTGLFWDLFAWCTWLC*RAELKQ Trigger: CTGCTTAAGCTCTGCTCTCAAGCAAAGCCAAGTGCA...CCAGGCAAAAAGATCCCAAAACAGTCCTGTCAAGAGATTGATGAGGAGCTCAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141052.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGCACGGGCATGCATCATCCTTGCTAATGGCTGTTGCTTTAAGTAAGAGGCCATCAATTATACAAAGTTaGGAGAGTCTTGCCCTCGAT | + |
|
Preference number: 3 (lower is better) Translates to: VHGHASSLLMAVALSKRPSIIQS*ESLALD Trigger: ATCGAGGGCAAGACTCTCCAAACTTTGTATAATTGA...TGGCCTCTTACTTAAAGCAACAGCCATTAGCAAGGATGATGCATGCCCGTGCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
||
| 3UTR CCA 72 bp | AGTATCATTGCAGTGGCTGCATCAATGTCAGATTCTTaGAGAGTTTGCACTTGGCTTTGCTTGAGAGCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: SIIAVAASMSDS*RVCTWLCLRAE Trigger: CTCTGCTCTCAAGCAAAGCCAAGTGCAAACTCTCCAAGAATCTGACATTGATGCAGCCACTGCAATGATACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141052.2 |
||
| 3UTR TCA 72 bp | TGCACTTGGCTTTGCTTGAGAGCAGAGCTTAAGCAGTaGGGTGATAAAGCAGCACTTTGTGGAGAAGAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: CTWLCLRAELKQ*GDKAALCGEEK Trigger: TTTTTCTTCTCCACAAAGTGCTGCTTTATCACCTCACTGCTTAAGCTCTGCTCTCAAGCAAAGCCAAGTGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141052.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTCCCTCAACGCCTGCTCCAGCTTTGAACTACGCTAATGCTAACATGTATCTAACTTCACACTTCTGCTaGGTGTTTTATTCACTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: IPSTPAPALNYANANMYLTSHFC*VFYSLQ Trigger: CTGCAGTGAATAAAACACCAAGCAGAAGTGTGAAGT...TAGATACATGTTAGCATTAGCGTAGTTCAAAGCTGGAGCAGGCGTTGAGGGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
||
| 3UTR-3UTR CAA 90 bp | ATTCCCTCAACGCCTGCTCCAGCTTTGAACTACGCTAATGCTAACATGTATCTAGAAACACTGATTCTCTaGGCAAAGTGGAAAATGAAG | + |
|
Preference number: 3 (lower is better) Translates to: IPSTPAPALNYANANMYLETLIL*AKWKMK Trigger: CTTCATTTTCCACTTTGCCAAGAGAATCAGTGTTTC...TAGATACATGTTAGCATTAGCGTAGTTCAAAGCTGGAGCAGGCGTTGAGGGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
||
| 3UTR TCA 72 bp | TGGAGAGTCTTGCCCTCGATGACTTTCCTTTACTTATaGTGTCATAACACATCTTCATTACAGTACGCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: WRVLPSMTFLYL*CHNTSSLQYAE Trigger: CTCAGCGTACTGTAATGAAGATGTGTTATGACATCATAAGTAAAGGAAAGTCATCGAGGGCAAGACTCTCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
||
| 3UTR CCA 72 bp | GGAAAGGAATTTAAGTTACTGCCTAAACACGAATTCTaGAGAGGTCTTTCTCTTGGAGCTGAGAACAACTCT | + |
|
Preference number: 3 (lower is better) Translates to: GKEFKLLPKHEF*RGLSLGAENNS Trigger: AGAGTTGTTCTCAGCTCCAAGAGAAAGACCTCTCCAGAATTCGTGTTTAGGCAGTAACTTAAATTCCTTTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
||
| 3UTR-3UTR CAA 90 bp | TTACAATGTACAAAGGAATCCCAGTCAAGAGAAGTAGAGCTGGCTATGAGAGCATGTTTTTCTTCTCATTaGACAGTATTGCCCAGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: LQCTKESQSREVELAMRACFSSH*TVLPRK Trigger: CTTTCTGGGCAATACTGTCAAATGAGAAGAAAAACA...TGCTCTCATAGCCAGCTCTACTTCTCTTGACTGGGATTCCTTTGTACATTGTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
||
| 3UTR TCA 72 bp | GCTAATGCTAACATGTATCTAACTGACCATCTAGTATaGACCCTTTACATAATGCCTCAGAAAGCACTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: ANANMYLTDHLV*TLYIMPQKALR Trigger: TCTCAGTGCTTTCTGAGGCATTATGTAAAGGGTTCATACTAGATGGTCAGTTAGATACATGTTAGCATTAGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
||
| 3UTR-3UTR CAA 90 bp | CATATGCTCAACTTTACAATGTACAAAGGAATCCCAGTCAAGAGAAGTAGAGCTAGAAAAATTCAAAGGTaGCTGTCTAGAATACAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: HMLNFTMYKGIPVKRSRARKIQR*LSRIQD Trigger: GTCCTGTATTCTAGACAGCAACCTTTGAATTTTTCT...AGCTCTACTTCTCTTGACTGGGATTCCTTTGTACATTGTAAAGTTGAGCATATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
||
| 3UTR-3UTR CAA 90 bp | CATATGCTCAACTTTACAATGTACAAAGGAATCCCAGTCAAGAGAAGTAGAGCTCTGAGCCTATGTATGTaGCATATAGCAAGTGTATAT | + |
|
Preference number: 3 (lower is better) Translates to: HMLNFTMYKGIPVKRSRALSLCM*HIASVY Trigger: ATATACACTTGCTATATGCAACATACATAGGCTCAG...AGCTCTACTTCTCTTGACTGGGATTCCTTTGTACATTGTAAAGTTGAGCATATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
||
| 3UTR-3UTR CAA 90 bp | TTGCACAAATTTCAAAGTCATACTCAAGAAACACTGATTCTCTTGGCAAAGTGGCATACAGGTATTACATaGCCTTCTCAAAGAGTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: LHKFQSHTQETLILLAKWHTGIT*PSQRVL Trigger: CAAAACTCTTTGAGAAGGCAATGTAATACCTGTATG...CCACTTTGCCAAGAGAATCAGTGTTTCTTGAGTATGACTTTGAAATTTGTGCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
||
| 3UTR TCA 72 bp | TTCAATTATACAAAGTTTGGAGAGTCTTGCCCTCGATaGCTTTCCTTTACTTATGATGTCATAACACATCTT | + |
|
Preference number: 3 (lower is better) Translates to: FNYTKFGESCPR*LSFTYDVITHL Trigger: AAGATGTGTTATGACATCATAAGTAAAGGAAAGTCATCGAGGGCAAGACTCTCCAAACTTTGTATAATTGAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
||
| CDS-3UTR CCA 90 bp | GTTGGAGACGGGCTCTCCTGCAGTCGCACAGCACCGGGGGCACTGAACGCGCTGCACTGCCCACAAGAGTaGCCTTTGGCCTGGCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VGDGLSCSRTAPGALNALHCPQE*PLAWQH Trigger: ATGCTGCCAGGCCAAAGGCCACTCTTGTGGGCAGTG...CAGCGCGTTCAGTGCCCCCGGTGCTGTGCGACTGCAGGAGAGCCCGTCTCCAAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141052.2 |
||
| CDS-3UTR CCA 90 bp | CACCCTCAGCTGAAGAGGTCCGTCCGTCCGTCCGTCCGCTATGGCTCTGACATCGAGTGGCCTTTGGCCTaGCAGCATCCCCAGCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: HPQLKRSVRPSVRYGSDIEWPLA*QHPQLQ Trigger: CTGAAGCTGGGGATGCTGCCAGGCCAAAGGCCACTC...GATGTCAGAGCCATAGCGGACGGACGGACGGACGGACCTCTTCAGCTGAGGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112238.9 ENSMUST00000141052.2 |
||
| 3UTR CAA 72 bp | GCCTGGCTGCCCTTTCAGAGTACTGTGTCCACGAGCTaGCGGTGCGTAGCCACTGTCTCCCAGAGGATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: AWLPFQSTVSTS*RCVATVSQRIL Trigger: GAGGATCCTCTGGGAGACAGTGGCTACGCACCGCAAGCTCGTGGACACAGTACTCTGAAAGGGCAGCCAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141052.2 |
||
| CDS-3UTR GCA 90 bp | GGAACCAAGGCAGGTGCGGATTCCAGCAAGGTGGAGCAGCGACCCGGCTGCCTCCTTCCAGCCTGTAGGTaGAGTGGCAAAGTATGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GTKAGADSSKVEQRPGCLLPACR*SGKVWE Trigger: TTCCCATACTTTGCCACTGCACCTACAGGCTGGAAG...GAGGCAGCCGGGTCGCTGCTCCACCTTGCTGGAATCCGCACCTGCCTTGGTTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141052.2 |
||
| CDS-3UTR GCA 90 bp | CACCCTCAGCTGAAGAGGTCCGTCCGTCCGTCCGTCCGCTATGGCTCTGACATCAATCTGACTCAGTCCTaGAACCTTCTCAGCTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: HPQLKRSVRPSVRYGSDINLTQS*NLLSSR Trigger: CCGGGAGCTGAGAAGGTTGCAGGACTGAGTCAGATT...GATGTCAGAGCCATAGCGGACGGACGGACGGACGGACCTCTTCAGCTGAGGGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112238.9 ENSMUST00000141052.2 |
||
| CDS-3UTR GCA 90 bp | CACCCTCAGCTGAAGAGGTCCGTCCGTCCGTCCGTCCGCTATGGCTCTGACATCCATCTGCTGACTCACTaGCCACAAGAGTGGCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: HPQLKRSVRPSVRYGSDIHLLTH*PQEWPL Trigger: CAAAGGCCACTCTTGTGGGCAGTGAGTCAGCAGATG...GATGTCAGAGCCATAGCGGACGGACGGACGGACGGACCTCTTCAGCTGAGGGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112238.9 ENSMUST00000141052.2 |
||
| CDS-3UTR TCA 90 bp | CACCCTCAGCTGAAGAGGTCCGTCCGTCCGTCCGTCCGCTATGGCTCTGACATCGCACTTGGCTTTGCTTaGGAGCAGAGCTTAAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: HPQLKRSVRPSVRYGSDIALGFA*EQSLSS Trigger: ACTGCTTAAGCTCTGCTCTCAAGCAAAGCCAAGTGC...GATGTCAGAGCCATAGCGGACGGACGGACGGACGGACCTCTTCAGCTGAGGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
||
| CDS-3UTR CCA 90 bp | GTTGGAGACGGGCTCTCCTGCAGTCGCACAGCACCGGGGGCACTGAACGCGCTGCTCAGCTCTCTTATCTaGAGTCATTCCAATTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: VGDGLSCSRTAPGALNALLSSLI*SHSNYW Trigger: CCAGTAATTGGAATGACTCCAGATAAGAGAGCTGAG...CAGCGCGTTCAGTGCCCCCGGTGCTGTGCGACTGCAGGAGAGCCCGTCTCCAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141052.2 |
||
| CDS-3UTR CCA 90 bp | CCCGCCGTGGCTGCTCTTTGGGATGAATTCATACACCTCATCCACAGAGGACAGGAGTGGCCTTTGGCCTaGCAGCATCCCCAGCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PAVAALWDEFIHLIHRGQEWPLA*QHPQLQ Trigger: CTGAAGCTGGGGATGCTGCCAGGCCAAAGGCCACTC...CTGTCCTCTGTGGATGAGGTGTATGAATTCATCCCAAAGAGCAGCCACGGCGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141052.2 |
||
| CDS-3UTR CCA 90 bp | ATCCACAGAGGACAGAGAAGACATGCTCGCCCTGGATGCGCAGCGCTGGGCCGCCGATGGTCCAAAGGATaGCATCTCATCTCCCTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: IHRGQRRHARPGCAALGRRWSKG*HLISLY Trigger: ATAGAGGGAGATGAGATGCCATCCTTTGGACCATCG...GCGGCCCAGCGCTGCGCATCCAGGGCGAGCATGTCTTCTCTGTCCTCTGTGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141052.2 |
||
| CDS-3UTR CCA 90 bp | CACCCTCAGCTGAAGAGGTCCGTCCGTCCGTCCGTCCGCTATGGCTCTGACATCTGGGATCTTTTTGCCTaGCTGCCCTTTCAGAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: HPQLKRSVRPSVRYGSDIWDLFA*LPFQST Trigger: AGTACTCTGAAAGGGCAGCCAGGCAAAAAGATCCCA...GATGTCAGAGCCATAGCGGACGGACGGACGGACGGACCTCTTCAGCTGAGGGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
||
| CDS-3UTR GCA 90 bp | CTACTGAAAAGGCCTCCAGTCTACAAGACACAAGCATTCCCTCAACGCCTGCTCGAGCAGCGACCCGGCTaGCTCTTTGAGCTCCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: LLKRPPVYKTQAFPQRLLEQRPG*LFELLI Trigger: GATGAGGAGCTCAAAGAGGCAGCCGGGTCGCTGCTC...GAGCAGGCGTTGAGGGAATGCTTGTGTCTTGTAGACTGGAGGCCTTTTCAGTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
||
| CDS-3UTR CCA 90 bp | CTACTGAAAAGGCCTCCAGTCTACAAGACACAAGCATTCCCTCAACGCCTGCTCCACAAGAGTGGCCTTTaGCCTGGCAGCATCCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LLKRPPVYKTQAFPQRLLHKSGL*PGSIPS Trigger: GCTGGGGATGCTGCCAGGCCAAAGGCCACTCTTGTG...GAGCAGGCGTTGAGGGAATGCTTGTGTCTTGTAGACTGGAGGCCTTTTCAGTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
||
| CDS-3UTR GCA 90 bp | CCCGCCGTGGCTGCTCTTTGGGATGAATTCATACACCTCATCCACAGAGGACAGCATCTGCTGACTCACTaGCCACAAGAGTGGCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PAVAALWDEFIHLIHRGQHLLTH*PQEWPL Trigger: CAAAGGCCACTCTTGTGGGCAGTGAGTCAGCAGATG...CTGTCCTCTGTGGATGAGGTGTATGAATTCATCCCAAAGAGCAGCCACGGCGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141052.2 |
||
| 3UTR CAA 72 bp | TCCATTTGCAGAACAACATGCCCGCTGCACAGGGCCTaGAGAGACATACTGCTGGTGAAGCACGGAATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SICRTTCPLHRA*RDILLVKHGMW Trigger: CCACATTCCGTGCTTCACCAGCAGTATGTCTCTCAAGGCCCTGTGCAGCGGGCATGTTGTTCTGCAAATGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
||
| CDS-3UTR TCA 90 bp | CTACTGAAAAGGCCTCCAGTCTACAAGACACAAGCATTCCCTCAACGCCTGCTCACCCGGCTGCCTCTTTaGGCTCCTCATCAATCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLKRPPVYKTQAFPQRLLTRLPL*APHQSL Trigger: AAGAGATTGATGAGGAGCTCAAAGAGGCAGCCGGGT...GAGCAGGCGTTGAGGGAATGCTTGTGTCTTGTAGACTGGAGGCCTTTTCAGTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
||
| CDS-3UTR CCA 90 bp | CACCCTCAGCTGAAGAGGTCCGTCCGTCCGTCCGTCCGCTATGGCTCTGACATCAGGCAAACATTTATTTaGCGAGTGTTCAATAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: HPQLKRSVRPSVRYGSDIRQTFI*RVFNSH Trigger: ATGGCTATTGAACACTCGCCAAATAAATGTTTGCCT...GATGTCAGAGCCATAGCGGACGGACGGACGGACGGACCTCTTCAGCTGAGGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112238.9 ENSMUST00000141052.2 |
||
| CDS-3UTR CCA 90 bp | TTACAATGTACAAAGGAATCCCAGTCAAGAGAAGTAGAGCTGGCTATGAGAGCACGGATTCCAGCAAGGTaGAGCAGCGACCCGGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LQCTKESQSREVELAMRARIPAR*SSDPAA Trigger: GGCAGCCGGGTCGCTGCTCCACCTTGCTGGAATCCG...TGCTCTCATAGCCAGCTCTACTTCTCTTGACTGGGATTCCTTTGTACATTGTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
||
| CDS-3UTR TCA 90 bp | CCCGGTGCTTCTGACTCTGTGCCTTCGCAGTACTTATCAGGGAACCAAGGCAGGCTTCACTTCCAAGTCTaGGGTTTGTTAGAAGGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: PGASDSVPSQYLSGNQGRLHFQV*GLLEGY Trigger: GTAACCTTCTAACAAACCTCAGACTTGGAAGTGAAG...CCTGCCTTGGTTCCCTGATAAGTACTGCGAAGGCACAGAGTCAGAAGCACCGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141052.2 |
||
| CDS-3UTR CCA 90 bp | GTGCACGGGCATGCATCATCCTTGCTAATGGCTGTTGCTTTAAGTAAGAGGCCAGTTCTGGTAGCACGATaGTCCAAAGGATGGCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: VHGHASSLLMAVALSKRPVLVAR*SKGWHL Trigger: GAGATGCCATCCTTTGGACCATCGTGCTACCAGAAC...TGGCCTCTTACTTAAAGCAACAGCCATTAGCAAGGATGATGCATGCCCGTGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
||
| 3UTR CAA 72 bp | AACTCTTTCCTCCTACTTCAGACCATTTTCCTCCATTaGCAGAACAACATGCCCGCTGCACAGGGCCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: NSFLLLQTIFLH*QNNMPAAQGLE Trigger: CTCAAGGCCCTGTGCAGCGGGCATGTTGTTCTGCAAATGGAGGAAAATGGTCTGAAGTAGGAGGAAAGAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
||
| CDS-3UTR GCA 90 bp | GCTCTTTGGGATGAATTCATACACCTCATCCACAGAGGACAGAGAAGACATGCTAATCTGACTCAGTCCTaGAACCTTCTCAGCTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: ALWDEFIHLIHRGQRRHANLTQS*NLLSSR Trigger: CCGGGAGCTGAGAAGGTTGCAGGACTGAGTCAGATT...AGCATGTCTTCTCTGTCCTCTGTGGATGAGGTGTATGAATTCATCCCAAAGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141052.2 |
||
| CDS-3UTR GCA 90 bp | TTACAATGTACAAAGGAATCCCAGTCAAGAGAAGTAGAGCTGGCTATGAGAGCAGGGAACCAAGGCAGGTaGGGATTCCAGCAAGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LQCTKESQSREVELAMRAGNQGR*GFQQGG Trigger: TCCACCTTGCTGGAATCCGCACCTGCCTTGGTTCCC...TGCTCTCATAGCCAGCTCTACTTCTCTTGACTGGGATTCCTTTGTACATTGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
||
| CDS-3UTR GCA 90 bp | CCCGCCGTGGCTGCTCTTTGGGATGAATTCATACACCTCATCCACAGAGGACAGTCTGTAAAAAGGGCTTaGCATGACTTCTTTCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: PAVAALWDEFIHLIHRGQSVKRA*HDFFPL Trigger: AAGTGGAAAGAAGTCATGGCAAGCCCTTTTTACAGA...CTGTCCTCTGTGGATGAGGTGTATGAATTCATCCCAAAGAGCAGCCACGGCGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141052.2 |
||
| CDS-3UTR TCA 90 bp | ATTCCCTCAACGCCTGCTCCAGCTTTGAACTACGCTAATGCTAACATGTATCTATTTTCCCGGTGCTTCTaGCTCTGTGCCTTCGCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: IPSTPAPALNYANANMYLFSRCF*LCAFAV Trigger: TACTGCGAAGGCACAGAGTCAGAAGCACCGGGAAAA...TAGATACATGTTAGCATTAGCGTAGTTCAAAGCTGGAGCAGGCGTTGAGGGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
||
| CDS-3UTR GCA 90 bp | CTACTGAAAAGGCCTCCAGTCTACAAGACACAAGCATTCCCTCAACGCCTGCTCGGAGAAGAAAAAGGCTaGTTCTTTAAGGCCTGCATA | + |
|
Preference number: 4 (lower is better) Translates to: LLKRPPVYKTQAFPQRLLGEEKG*FFKACI Trigger: TATGCAGGCCTTAAAGAAGCAGCCTTTTTCTTCTCC...GAGCAGGCGTTGAGGGAATGCTTGTGTCTTGTAGACTGGAGGCCTTTTCAGTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
||
| CDS-3UTR CCA 90 bp | CTACTGAAAAGGCCTCCAGTCTACAAGACACAAGCATTCCCTCAACGCCTGCTCCTCAGCTCTCTTATCTaGAGTCATTCCAATTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLKRPPVYKTQAFPQRLLLSSLI*SHSNYW Trigger: CCAGTAATTGGAATGACTCCAGATAAGAGAGCTGAG...GAGCAGGCGTTGAGGGAATGCTTGTGTCTTGTAGACTGGAGGCCTTTTCAGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
||
| CDS-3UTR CCA 90 bp | CATTGCAGTGGCTGCATCAATGTCAGATTCTTGGAGAGTTTGCACTTGGCTTTGGTTCTGGTAGCACGATaGTCCAAAGGATGGCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: HCSGCINVRFLESLHLALVLVAR*SKGWHL Trigger: GAGATGCCATCCTTTGGACCATCGTGCTACCAGAAC...CAAAGCCAAGTGCAAACTCTCCAAGAATCTGACATTGATGCAGCCACTGCAATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141052.2 |
||
| CDS-3UTR TCA 90 bp | GTGCACGGGCATGCATCATCCTTGCTAATGGCTGTTGCTTTAAGTAAGAGGCCACTTCACTTCCAAGTCTaGGGTTTGTTAGAAGGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: VHGHASSLLMAVALSKRPLHFQV*GLLEGY Trigger: GTAACCTTCTAACAAACCTCAGACTTGGAAGTGAAG...TGGCCTCTTACTTAAAGCAACAGCCATTAGCAAGGATGATGCATGCCCGTGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
||
| CDS-3UTR GCA 90 bp | ATTCCCTCAACGCCTGCTCCAGCTTTGAACTACGCTAATGCTAACATGTATCTACTTCCAGCCTGTAGGTaGAGTGGCAAAGTATGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: IPSTPAPALNYANANMYLLPACR*SGKVWE Trigger: TTCCCATACTTTGCCACTGCACCTACAGGCTGGAAG...TAGATACATGTTAGCATTAGCGTAGTTCAAAGCTGGAGCAGGCGTTGAGGGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
||
| CDS-3UTR CCA 90 bp | ATTTCAAAGATAACTATTGCAGGAGGAATTAGTCTTAAGATGGCCACATCCCCACACTGCCCACAAGAGTaGCCTTTGGCCTGGCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: ISKITIAGGISLKMATSPHCPQE*PLAWQH Trigger: ATGCTGCCAGGCCAAAGGCCACTCTTGTGGGCAGTG...TGGGGATGTGGCCATCTTAAGACTAATTCCTCCTGCAATAGTTATCTTTGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
||
| 3UTR CAA 72 bp | CAAGTGCAAGGTGTTAGAGAACACTGCTTATTAGTCTaGAGTGCACGGGCATGCATCATCCTTGCTAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: QVQGVREHCLLV*SARACIILANG Trigger: GCCATTAGCAAGGATGATGCATGCCCGTGCACTCAAGACTAATAAGCAGTGTTCTCTAACACCTTGCACTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
||
| CDS-3UTR TCA 90 bp | ATTCCCTCAACGCCTGCTCCAGCTTTGAACTACGCTAATGCTAACATGTATCTACCTCTTCTTCTGCAGTaGTGTTTTAAGAGGCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: IPSTPAPALNYANANMYLPLLLQ*CFKRQW Trigger: CCACTGCCTCTTAAAACATCACTGCAGAAGAAGAGG...TAGATACATGTTAGCATTAGCGTAGTTCAAAGCTGGAGCAGGCGTTGAGGGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
||
| CDS-3UTR GCA 90 bp | ATTCCCTCAACGCCTGCTCCAGCTTTGAACTACGCTAATGCTAACATGTATCTAGTTTTGGGATCTTTTTaGCTGGCTGCCCTTTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: IPSTPAPALNYANANMYLVLGSF*LAALSE Trigger: CTCTGAAAGGGCAGCCAGGCAAAAAGATCCCAAAAC...TAGATACATGTTAGCATTAGCGTAGTTCAAAGCTGGAGCAGGCGTTGAGGGAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
||
| 3UTR CAA 72 bp | CAAGACACAAGCATTCCCTCAACGCCTGCTCCAGCTTaGAACTACGCTAATGCTAACATGTATCTAACTGAC | + |
|
Preference number: 4 (lower is better) Translates to: QDTSIPSTPAPA*NYANANMYLTD Trigger: GTCAGTTAGATACATGTTAGCATTAGCGTAGTTCAAAGCTGGAGCAGGCGTTGAGGGAATGCTTGTGTCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
||
| CDS-3UTR TCA 90 bp | GTATCATTGCAGTGGCTGCATCAATGTCAGATTCTTGGAGAGTTTGCACTTGGCAGGTTACTGCTCTCATaGAGCCAGTTCAAGTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: VSLQWLHQCQILGEFALGRLLLS*SQFKFV Trigger: AACAAACTTGAACTGGCTTCATGAGAGCAGTAACCT...GCCAAGTGCAAACTCTCCAAGAATCTGACATTGATGCAGCCACTGCAATGATAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141052.2 |
||
| CDS-3UTR GCA 90 bp | TTACAATGTACAAAGGAATCCCAGTCAAGAGAAGTAGAGCTGGCTATGAGAGCAGTGCTTCTGACTCTGTaGCTTCGCAGTACTTATCAG | + |
|
Preference number: 4 (lower is better) Translates to: LQCTKESQSREVELAMRAVLLTL*LRSTYQ Trigger: CTGATAAGTACTGCGAAGGCACAGAGTCAGAAGCAC...TGCTCTCATAGCCAGCTCTACTTCTCTTGACTGGGATTCCTTTGTACATTGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
||
| CDS-3UTR CCA 90 bp | TTACAATGTACAAAGGAATCCCAGTCAAGAGAAGTAGAGCTGGCTATGAGAGCACGATGGTCCAAAGGATaGCATCTCATCTCCCTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: LQCTKESQSREVELAMRARWSKG*HLISLY Trigger: ATAGAGGGAGATGAGATGCCATCCTTTGGACCATCG...TGCTCTCATAGCCAGCTCTACTTCTCTTGACTGGGATTCCTTTGTACATTGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
||
| CDS-3UTR CCA 90 bp | TTACAATGTACAAAGGAATCCCAGTCAAGAGAAGTAGAGCTGGCTATGAGAGCATGGAGAGTTTGCACTTaGCTTTGCTTGAGAGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LQCTKESQSREVELAMRAWRVCT*LCLRAE Trigger: CTCTGCTCTCAAGCAAAGCCAAGTGCAAACTCTCCA...TGCTCTCATAGCCAGCTCTACTTCTCTTGACTGGGATTCCTTTGTACATTGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
||
| 3UTR CAA 72 bp | GAAGAAAAAGGCTGCTTCTTTAAGGCCTGCATAAGATaGGGCTTATATTCTGGATCAACGCACCACAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: EEKGCFFKACIR*GLYSGSTHHKE Trigger: CTCCTTGTGGTGCGTTGATCCAGAATATAAGCCCAATCTTATGCAGGCCTTAAAGAAGCAGCCTTTTTCTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141052.2 |
||
| 3UTR CAA 72 bp | AAGTATCATTGCAGTGGCTGCATCAATGTCAGATTCTaGGAGAGTTTGCACTTGGCTTTGCTTGAGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KYHCSGCINVRF*ESLHLALLESR Trigger: TCTGCTCTCAAGCAAAGCCAAGTGCAAACTCTCCAAGAATCTGACATTGATGCAGCCACTGCAATGATACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141052.2 |
||
| CDS-3UTR TCA 90 bp | ATTCCCTCAACGCCTGCTCCAGCTTTGAACTACGCTAATGCTAACATGTATCTAAGGTTACTGCTCTCATaGAGCCAGTTCAAGTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: IPSTPAPALNYANANMYLRLLLS*SQFKFV Trigger: AACAAACTTGAACTGGCTTCATGAGAGCAGTAACCT...TAGATACATGTTAGCATTAGCGTAGTTCAAAGCTGGAGCAGGCGTTGAGGGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
||
| CDS-3UTR TCA 90 bp | ATTTCAAAGATAACTATTGCAGGAGGAATTAGTCTTAAGATGGCCACATCCCCAGCAGAGCTTAAGCAGTaGGGTGATAAAGCAGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: ISKITIAGGISLKMATSPAELKQ*GDKAAL Trigger: AAGTGCTGCTTTATCACCTCACTGCTTAAGCTCTGC...TGGGGATGTGGCCATCTTAAGACTAATTCCTCCTGCAATAGTTATCTTTGAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
||
| CDS-3UTR CCA 90 bp | GCTCTTTGGGATGAATTCATACACCTCATCCACAGAGGACAGAGAAGACATGCTAGGCAAACATTTATTTaGCGAGTGTTCAATAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: ALWDEFIHLIHRGQRRHARQTFI*RVFNSH Trigger: ATGGCTATTGAACACTCGCCAAATAAATGTTTGCCT...AGCATGTCTTCTCTGTCCTCTGTGGATGAGGTGTATGAATTCATCCCAAAGAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141052.2 |
||
| CDS-3UTR CCA 90 bp | TTGCACAAATTTCAAAGTCATACTCAAGAAACACTGATTCTCTTGGCAAAGTGGGCCGTGGCTGCTCTTTaGGATGAATTCATACACCTC | + |
|
Preference number: 4 (lower is better) Translates to: LHKFQSHTQETLILLAKWAVAAL*DEFIHL Trigger: GAGGTGTATGAATTCATCCCAAAGAGCAGCCACGGC...CCACTTTGCCAAGAGAATCAGTGTTTCTTGAGTATGACTTTGAAATTTGTGCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
||
| 3UTR CAA 72 bp | CATCCCTTAGAAATGGAATTCGTTCCAACCAAATTCTaGTTTCGGTGTAAGGCAGAGTATACCTTAGCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: HPLEMEFVPTKF*FRCKAEYTLAN Trigger: GTTGGCTAAGGTATACTCTGCCTTACACCGAAACAAGAATTTGGTTGGAACGAATTCCATTTCTAAGGGATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
||
| CDS-3UTR TCA 90 bp | TTGCACAAATTTCAAAGTCATACTCAAGAAACACTGATTCTCTTGGCAAAGTGGGGCTGCTCTTTGGGATaGATTCATACACCTCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: LHKFQSHTQETLILLAKWGCSLG*IHTPHP Trigger: TGGATGAGGTGTATGAATTCATCCCAAAGAGCAGCC...CCACTTTGCCAAGAGAATCAGTGTTTCTTGAGTATGACTTTGAAATTTGTGCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
||
| CDS-3UTR TCA 90 bp | GCACAAATTTCAAAGTCATACTCAAGAAACACTGATTCTCTTGGCAAAGTGGAATCCTCATCAATCTCTTaGCAGGACTGTTTTGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: AQISKSYSRNTDSLGKVESSSIS*QDCFGI Trigger: GATCCCAAAACAGTCCTGTCAAGAGATTGATGAGGA...TTCCACTTTGCCAAGAGAATCAGTGTTTCTTGAGTATGACTTTGAAATTTGTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
||
| CDS-3UTR CCA 90 bp | TTACAATGTACAAAGGAATCCCAGTCAAGAGAAGTAGAGCTGGCTATGAGAGCAAAAGTATCATTGCAGTaGCTGCATCAATGTCAGATT | + |
|
Preference number: 4 (lower is better) Translates to: LQCTKESQSREVELAMRAKVSLQ*LHQCQI Trigger: AATCTGACATTGATGCAGCCACTGCAATGATACTTT...TGCTCTCATAGCCAGCTCTACTTCTCTTGACTGGGATTCCTTTGTACATTGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
||
| CDS-3UTR GCA 90 bp | CATATGCTCAACTTTACAATGTACAAAGGAATCCCAGTCAAGAGAAGTAGAGCTTTGTTAGAAGGTTACTaGTCTCATGAAGCCAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HMLNFTMYKGIPVKRSRALLEGY*SHEASS Trigger: TGAACTGGCTTCATGAGAGCAGTAACCTTCTAACAA...AGCTCTACTTCTCTTGACTGGGATTCCTTTGTACATTGTAAAGTTGAGCATATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
||
| CDS-3UTR GCA 90 bp | GCACAAATTTCAAAGTCATACTCAAGAAACACTGATTCTCTTGGCAAAGTGGAATGCTTCTTTAAGGCCTaGATAAGATTGGGCTTATAT | + |
|
Preference number: 4 (lower is better) Translates to: AQISKSYSRNTDSLGKVECFFKA*IRLGLY Trigger: ATATAAGCCCAATCTTATGCAGGCCTTAAAGAAGCA...TTCCACTTTGCCAAGAGAATCAGTGTTTCTTGAGTATGACTTTGAAATTTGTGC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
||
| 3UTR CAA 72 bp | GCAGTGGCTTCTCACATTCTAAAATCTCTTGTTCTATaGAAGTATTTAAAAGTATCATTGCAGTGGCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: AVASHILKSLVL*KYLKVSLQWLH Trigger: ATGCAGCCACTGCAATGATACTTTTAAATACTTCAATAGAACAAGAGATTTTAGAATGTGAGAAGCCACTGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141052.2 |
||
| CDS-3UTR CAA 90 bp | CCAAGGCAGGTGCGGATTCCAGCAAGGTGGAGCAGCGACCCGGCTGCCTCTTTGCCACAAGAGTGGCCTTaGGCCTGGCAGCATCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PRQVRIPARWSSDPAASLPQEWP*AWQHPQ Trigger: CTGGGGATGCTGCCAGGCCAAAGGCCACTCTTGTGG...CAAAGAGGCAGCCGGGTCGCTGCTCCACCTTGCTGGAATCCGCACCTGCCTTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141052.2 |
||
| CDS-3UTR CAA 90 bp | CACCCTCAGCTGAAGAGGTCCGTCCGTCCGTCCGTCCGCTATGGCTCTGACATCGACCCGGCTGCCTCTTaGAGCTCCTCATCAATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: HPQLKRSVRPSVRYGSDIDPAAS*SSSSIS Trigger: AGAGATTGATGAGGAGCTCAAAGAGGCAGCCGGGTC...GATGTCAGAGCCATAGCGGACGGACGGACGGACGGACCTCTTCAGCTGAGGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
||
| CDS-3UTR CAA 90 bp | CCAAGGCAGGTGCGGATTCCAGCAAGGTGGAGCAGCGACCCGGCTGCCTCTTTGGAAGCCAGTTCAAGTTaGTTAGCTCGTCATCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PRQVRIPARWSSDPAASLEASSS*LARHLL Trigger: CAGCAGATGACGAGCTAACAAACTTGAACTGGCTTC...CAAAGAGGCAGCCGGGTCGCTGCTCCACCTTGCTGGAATCCGCACCTGCCTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141052.2 |
||
| CDS-3UTR CAA 90 bp | CTACTGAAAAGGCCTCCAGTCTACAAGACACAAGCATTCCCTCAACGCCTGCTCCCACAAGAGTGGCCTTaGGCCTGGCAGCATCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LLKRPPVYKTQAFPQRLLPQEWP*AWQHPQ Trigger: CTGGGGATGCTGCCAGGCCAAAGGCCACTCTTGTGG...GAGCAGGCGTTGAGGGAATGCTTGTGTCTTGTAGACTGGAGGCCTTTTCAGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
||
| CDS-3UTR CAA 90 bp | CACCCTCAGCTGAAGAGGTCCGTCCGTCCGTCCGTCCGCTATGGCTCTGACATCTGTTTTGGGATCTTTTaGCCTGGCTGCCCTTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: HPQLKRSVRPSVRYGSDICFGIF*PGCPFR Trigger: TCTGAAAGGGCAGCCAGGCAAAAAGATCCCAAAACA...GATGTCAGAGCCATAGCGGACGGACGGACGGACGGACCTCTTCAGCTGAGGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
||
| CDS GCA 90 bp | CATGAAGCCAGTTCAAGTTTGTTAGCTCGTCATCTGCTGACTCACTaGCCACAAGAGTGGCCTTTGGCCTGGCAGCATCCCCAGCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: HEASSSLLARHLLTH*PQEWPLAWQHPQLQ Trigger: CTGAAGCTGGGGATGCTGCCAGGCCAAAGGCCACTCTTGTGGGCAGTGAGTCAGCAGATGACGAGCTAACAAACTTGAACTGGCTTCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112238.9 ENSMUST00000141052.2 ENSMUST00000155640.2 |
||
| CDS GCA 90 bp | CCCAGCTTCAGGCAAACTTCCCATTTTGTAAATCTGACTCAGTCCTaGAACCTTCTCAGCTCCCGGGGTCTCAGCTCTCTTATCTGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: PSFRQTSHFVNLTQS*NLLSSRGLSSLIWS Trigger: ACTCCAGATAAGAGAGCTGAGACCCCGGGAGCTGAGAAGGTTGCAGGACTGAGTCAGATTTACAAAATGGGAAGTTTGCCTGAAGCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000112238.9 ENSMUST00000141052.2 ENSMUST00000155640.2 |
||
| CDS-3UTR CAA 90 bp | CTACTGAAAAGGCCTCCAGTCTACAAGACACAAGCATTCCCTCAACGCCTGCTCGAAGCCAGTTCAAGTTaGTTAGCTCGTCATCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LLKRPPVYKTQAFPQRLLEASSS*LARHLL Trigger: CAGCAGATGACGAGCTAACAAACTTGAACTGGCTTC...GAGCAGGCGTTGAGGGAATGCTTGTGTCTTGTAGACTGGAGGCCTTTTCAGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
||
| CDS CCA 90 bp | ATGCCGAACAGAATTCTTCCAGCCTGTAGGTGCAGTGGCAAAGTATaGGAAGCGATCCAGAATCCAGCTGTAAATTTCTTTGACAGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: MPNRILPACRCSGKV*EAIQNPAVNFFDRQ Trigger: TTGCCTGTCAAAGAAATTTACAGCTGGATTCTGGATCGCTTCCCATACTTTGCCACTGCACCTACAGGCTGGAAGAATTCTGTTCGGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112238.9 ENSMUST00000141052.2 |
||
| CDS TCA 90 bp | CCTTCACTTCCAAGTCTGAGGTTTGTTAGAAGGTTACTGCTCTCATaGAGCCAGTTCAAGTTTGTTAGCTCGTCATCTGCTGACTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: PSLPSLRFVRRLLLS*SQFKFVSSSSADSL Trigger: CAGTGAGTCAGCAGATGACGAGCTAACAAACTTGAACTGGCTTCATGAGAGCAGTAACCTTCTAACAAACCTCAGACTTGGAAGTGAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112238.9 ENSMUST00000141052.2 ENSMUST00000155640.2 |
||
| CDS-3UTR CAA 90 bp | TTACAATGTACAAAGGAATCCCAGTCAAGAGAAGTAGAGCTGGCTATGAGAGCATGCACTTGGCTTTGCTaGAGAGCAGAGCTTAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LQCTKESQSREVELAMRACTWLC*RAELKQ Trigger: CTGCTTAAGCTCTGCTCTCAAGCAAAGCCAAGTGCA...TGCTCTCATAGCCAGCTCTACTTCTCTTGACTGGGATTCCTTTGTACATTGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
||
| CDS-3UTR CAA 90 bp | GCACAAATTTCAAAGTCATACTCAAGAAACACTGATTCTCTTGGCAAAGTGGAACTCCTCATCAATCTCTaGACAGGACTGTTTTGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: AQISKSYSRNTDSLGKVELLINL*TGLFWD Trigger: ATCCCAAAACAGTCCTGTCAAGAGATTGATGAGGAG...TTCCACTTTGCCAAGAGAATCAGTGTTTCTTGAGTATGACTTTGAAATTTGTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112238.9 |
||
| CDS CCA 72 bp | TTAGCTCGTCATCTGCTGACTCACTGCCCACAAGAGTaGCCTTTGGCCTGGCAGCATCCCCAGCTTCAGGCA | + |
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Preference number: 6 (lower is better) Translates to: LARHLLTHCPQE*PLAWQHPQLQA Trigger: TGCCTGAAGCTGGGGATGCTGCCAGGCCAAAGGCCACTCTTGTGGGCAGTGAGTCAGCAGATGACGAGCTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112238.9 ENSMUST00000141052.2 ENSMUST00000155640.2 |
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| CDS GCA 72 bp | AGTTCAAGTTTGTTAGCTCGTCATCTGCTGACTCACTaGCCACAAGAGTGGCCTTTGGCCTGGCAGCATCCC | + |
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Preference number: 6 (lower is better) Translates to: SSSLLARHLLTH*PQEWPLAWQHP Trigger: GGGATGCTGCCAGGCCAAAGGCCACTCTTGTGGGCAGTGAGTCAGCAGATGACGAGCTAACAAACTTGAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112238.9 ENSMUST00000141052.2 ENSMUST00000155640.2 |
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| CDS CCA 72 bp | TTTTTCTGGGTTCTGGTAGCACGATGGTCCAAAGGATaGCATCTCATCTCCCTCTATGTCATACAGCGGACT | + |
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Preference number: 6 (lower is better) Translates to: FFWVLVARWSKG*HLISLYVIQRT Trigger: AGTCCGCTGTATGACATAGAGGGAGATGAGATGCCATCCTTTGGACCATCGTGCTACCAGAACCCAGAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112238.9 ENSMUST00000141052.2 |
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| CDS CAA 72 bp | TTAGAAGGTTACTGCTCTCATGAAGCCAGTTCAAGTTaGTTAGCTCGTCATCTGCTGACTCACTGCCCACAA | + |
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Preference number: 6 (lower is better) Translates to: LEGYCSHEASSS*LARHLLTHCPQ Trigger: TTGTGGGCAGTGAGTCAGCAGATGACGAGCTAACAAACTTGAACTGGCTTCATGAGAGCAGTAACCTTCTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112238.9 ENSMUST00000141052.2 ENSMUST00000155640.2 |
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| CDS TCA 72 bp | CCAAGTCTGAGGTTTGTTAGAAGGTTACTGCTCTCATaGAGCCAGTTCAAGTTTGTTAGCTCGTCATCTGCT | + |
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Preference number: 6 (lower is better) Translates to: PSLRFVRRLLLS*SQFKFVSSSSA Trigger: AGCAGATGACGAGCTAACAAACTTGAACTGGCTTCATGAGAGCAGTAACCTTCTAACAAACCTCAGACTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112238.9 ENSMUST00000141052.2 ENSMUST00000155640.2 |
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| CDS CCA 72 bp | AGAATTCTTCCAGCCTGTAGGTGCAGTGGCAAAGTATaGGAAGCGATCCAGAATCCAGCTGTAAATTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: RILPACRCSGKV*EAIQNPAVNFF Trigger: AAAGAAATTTACAGCTGGATTCTGGATCGCTTCCCATACTTTGCCACTGCACCTACAGGCTGGAAGAATTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112238.9 ENSMUST00000141052.2 |
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| CDS CCA 72 bp | CCAGCTGTAAATTTCTTTGACAGGCAAACATTTATTTaGCGAGTGTTCAATAGCCATATAAATGAGAAGACT | + |
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Preference number: 6 (lower is better) Translates to: PAVNFFDRQTFI*RVFNSHINEKT Trigger: AGTCTTCTCATTTATATGGCTATTGAACACTCGCCAAATAAATGTTTGCCTGTCAAAGAAATTTACAGCTGG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112238.9 ENSMUST00000141052.2 |
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