Pregenerated sensors for FOXN1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002057Ensembl transcript IDs: ENSMUST00000108294.2
Found 148 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTGGGAAAGCTGGGGATCCCATTTGGTGGGTCATGGTGGGCATCTaGGTCACAGCTCAGCTCCACGGACATTCTGCCGGCTCCCTGGGA | + |
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Preference number: 1 (lower is better) Translates to: PGKAGDPIWWVMVGI*VTAQLHGHSAGSLG Trigger: TCCCAGGGAGCCGGCAGAATGTCCGTGGAGCTGAGCTGTGACTCAGATGCCCACCATGACCCACCAAATGGGATCCCCAGCTTTCCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| 3UTR GCA 90 bp | GCCCACCCTCGTGTGAGCTTGGGGACAACCTATGGAGGTTCTGGTTaGCCTCAGGCCCTGGGAAAGCTGGGGATCCCATTTGGTGGGTCA | + |
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Preference number: 1 (lower is better) Translates to: AHPRVSLGTTYGGSG*PQALGKLGIPFGGS Trigger: TGACCCACCAAATGGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAACCAGAACCTCCATAGGTTGTCCCCAAGCTCACACGAGGGTGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| 3UTR CCA 90 bp | GCATCTGAGTCACAGCTCAGCTCCACGGACATTCTGCCGGCTCCCTaGGAGCCCCAAGTCTGCTATGCAGGTGTGTGTATGTGTGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: ASESQLSSTDILPAP*EPQVCYAGVCMCVC Trigger: ACACACACACATACACACACCTGCATAGCAGACTTGGGGCTCCCAGGGAGCCGGCAGAATGTCCGTGGAGCTGAGCTGTGACTCAGATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| 3UTR GCA 90 bp | CATGTTGTGTTGGATTTGGGCTCAGTTTGGTCCCAGGGTAGATGCTaGCCCTTCTGTGTGTCACCTTGGAGATGGCCAACCAGAGTATAT | + |
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Preference number: 1 (lower is better) Translates to: HVVLDLGSVWSQGRC*PFCVSPWRWPTRVY Trigger: ATATACTCTGGTTGGCCATCTCCAAGGTGACACACAGAAGGGGCAGCATCTACCCTGGGACCAAACTGAGCCCAAATCCAACACAACATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| 3UTR GCA 90 bp | AAACATGTTGTGTTGGATTTGGGCTCAGTTTGGTCCCAGGGTAGATaGTGCCCCTTCTGTGTGTCACCTTGGAGATGGCCAACCAGAGTA | + |
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Preference number: 1 (lower is better) Translates to: KHVVLDLGSVWSQGR*CPFCVSPWRWPTRV Trigger: TACTCTGGTTGGCCATCTCCAAGGTGACACACAGAAGGGGCAGCATCTACCCTGGGACCAAACTGAGCCCAAATCCAACACAACATGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| 3UTR TCA 90 bp | AAAGCTTTTAGCTCTCAGCTGCCCCAGAAATCAAATCAGACTCTGTaGCCCAAGGCTTCCTCTGAGTGTAAGGCACATGATGAGCAGGTG | + |
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Preference number: 1 (lower is better) Translates to: KAFSSQLPQKSNQTL*PKASSECKAHDEQV Trigger: CACCTGCTCATCATGTGCCTTACACTCAGAGGAAGCCTTGGGTCACAGAGTCTGATTTGATTTCTGGGGCAGCTGAGAGCTAAAAGCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| 3UTR-3UTR GCA 90 bp | CCTATGGAGGTTCTGGTTGCCCTCAGGCCCTGGGAAAGCTGGGGATCCCATTTGGCTCCACGGACATTCTaGCGGCTCCCTGGGAGCCCC | + |
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Preference number: 2 (lower is better) Translates to: PMEVLVALRPWESWGSHLAPRTF*RLPGSP Trigger: GGGGCTCCCAGGGAGCCGGCAGAATGTCCGTGGAGC...CAAATGGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAACCAGAACCTCCATAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| 3UTR CAA 90 bp | CGCCCACCCTCGTGTGAGCTTGGGGACAACCTATGGAGGTTCTGGTaGCCCTCAGGCCCTGGGAAAGCTGGGGATCCCATTTGGTGGGTC | + |
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Preference number: 2 (lower is better) Translates to: RPPSCELGDNLWRFW*PSGPGKAGDPIWWV Trigger: GACCCACCAAATGGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAACCAGAACCTCCATAGGTTGTCCCCAAGCTCACACGAGGGTGGGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| 3UTR-3UTR GCA 90 bp | TGGAGGTTCTGGTTGCCCTCAGGCCCTGGGAAAGCTGGGGATCCCATTTGGTGGTGGGAGCCCCAAGTCTaGTATGCAGGTGTGTGTATG | + |
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Preference number: 2 (lower is better) Translates to: WRFWLPSGPGKAGDPIWWWEPQV*YAGVCM Trigger: CATACACACACCTGCATAGCAGACTTGGGGCTCCCA...CCACCAAATGGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAACCAGAACCTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| 3UTR-3UTR CCA 90 bp | GGTTCTGGTTGCCCTCAGGCCCTGGGAAAGCTGGGGATCCCATTTGGTGGGTCAAGAAAGAGTGAGACTTaGCAACCTGAAGGGGGCCTT | + |
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Preference number: 2 (lower is better) Translates to: GSGCPQALGKLGIPFGGSRKSET*QPEGGL Trigger: AAGGCCCCCTTCAGGTTGCCAAGTCTCACTCTTTCT...TGACCCACCAAATGGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAACCAGAACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| 3UTR-3UTR TCA 90 bp | TGGTCCCAGGGTAGATGCTGCCCCTTCTGTGTGTCACCTTGGAGATGGCCAACCCTGTCACACTGGCCCTaGGCTTTGCTAACTAAAGCT | + |
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Preference number: 2 (lower is better) Translates to: WSQGRCCPFCVSPWRWPTLSHWP*ALLTKA Trigger: AGCTTTAGTTAGCAAAGCTCAGGGCCAGTGTGACAG...GGTTGGCCATCTCCAAGGTGACACACAGAAGGGGCAGCATCTACCCTGGGACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| 3UTR-3UTR GCA 90 bp | CCTATGGAGGTTCTGGTTGCCCTCAGGCCCTGGGAAAGCTGGGGATCCCATTTGCCTAGTTACTCAGGATaGTTAAGACAGTTGACCGCA | + |
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Preference number: 2 (lower is better) Translates to: PMEVLVALRPWESWGSHLPSYSG*LRQLTA Trigger: TGCGGTCAACTGTCTTAAGCATCCTGAGTAACTAGG...CAAATGGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAACCAGAACCTCCATAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| 3UTR-3UTR CCA 90 bp | TGGTCCCAGGGTAGATGCTGCCCCTTCTGTGTGTCACCTTGGAGATGGCCAACCGATGCCCCCAACTTCTaGCTAACAAATAAGTTGGCT | + |
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Preference number: 2 (lower is better) Translates to: WSQGRCCPFCVSPWRWPTDAPNF*LTNKLA Trigger: AGCCAACTTATTTGTTAGCCAGAAGTTGGGGGCATC...GGTTGGCCATCTCCAAGGTGACACACAGAAGGGGCAGCATCTACCCTGGGACCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| 3UTR-3UTR TCA 90 bp | GCCAAGTCTGTAGAGCACATGGGGATTGGGATGAGGTTTGGAGGGGTGATCTTTTCAAATCAGACTCTGTaGCCCAAGGCTTCCTCTGAG | + |
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Preference number: 2 (lower is better) Translates to: AKSVEHMGIGMRFGGVIFSNQTL*PKASSE Trigger: CTCAGAGGAAGCCTTGGGTCACAGAGTCTGATTTGA...AAAGATCACCCCTCCAAACCTCATCCCAATCCCCATGTGCTCTACAGACTTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| 3UTR-3UTR CCA 90 bp | GTTCTGGTTGCCCTCAGGCCCTGGGAAAGCTGGGGATCCCATTTGGTGGGTCATATAAATAGAGATTTCTaGGAGAGGGCCAAGTCTGTA | + |
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Preference number: 2 (lower is better) Translates to: VLVALRPWESWGSHLVGHINRDF*ERAKSV Trigger: TACAGACTTGGCCCTCTCCCAGAAATCTCTATTTAT...ATGACCCACCAAATGGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAACCAGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| 3UTR GCA 72 bp | GGGCATCTGAGTCACAGCTCAGCTCCACGGACATTCTaGCGGCTCCCTGGGAGCCCCAAGTCTGCTATGCAG | + |
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Preference number: 3 (lower is better) Translates to: GHLSHSSAPRTF*RLPGSPKSAMQ Trigger: CTGCATAGCAGACTTGGGGCTCCCAGGGAGCCGGCAGAATGTCCGTGGAGCTGAGCTGTGACTCAGATGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| 3UTR CCA 72 bp | CCCTCGTGTGAGCTTGGGGACAACCTATGGAGGTTCTaGTTGCCCTCAGGCCCTGGGAAAGCTGGGGATCCC | + |
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Preference number: 3 (lower is better) Translates to: PSCELGDNLWRF*LPSGPGKAGDP Trigger: GGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAACCAGAACCTCCATAGGTTGTCCCCAAGCTCACACGAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| 3UTR TCA 72 bp | GCTGGGGATCCCATTTGGTGGGTCATGGTGGGCATCTaGGTCACAGCTCAGCTCCACGGACATTCTGCCGGC | + |
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Preference number: 3 (lower is better) Translates to: AGDPIWWVMVGI*VTAQLHGHSAG Trigger: GCCGGCAGAATGTCCGTGGAGCTGAGCTGTGACTCAGATGCCCACCATGACCCACCAAATGGGATCCCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| 3UTR CCA 72 bp | ATGGAGGTTCTGGTTGCCCTCAGGCCCTGGGAAAGCTaGGGATCCCATTTGGTGGGTCATGGTGGGCATCTG | + |
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Preference number: 3 (lower is better) Translates to: MEVLVALRPWES*GSHLVGHGGHL Trigger: CAGATGCCCACCATGACCCACCAAATGGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAACCAGAACCTCCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| 3UTR GCA 72 bp | ACGGACATTCTGCCGGCTCCCTGGGAGCCCCAAGTCTaGTATGCAGGTGTGTGTATGTGTGTGTGTGTGTGG | + |
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Preference number: 3 (lower is better) Translates to: TDILPAPWEPQV*YAGVCMCVCVW Trigger: CCACACACACACACACATACACACACCTGCATAGCAGACTTGGGGCTCCCAGGGAGCCGGCAGAATGTCCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| 3UTR GCA 72 bp | CGTGTGAGCTTGGGGACAACCTATGGAGGTTCTGGTTaGCCTCAGGCCCTGGGAAAGCTGGGGATCCCATTT | + |
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Preference number: 3 (lower is better) Translates to: RVSLGTTYGGSG*PQALGKLGIPF Trigger: AAATGGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAACCAGAACCTCCATAGGTTGTCCCCAAGCTCACACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| 3UTR CCA 72 bp | GGACAACCTATGGAGGTTCTGGTTGCCCTCAGGCCCTaGGAAAGCTGGGGATCCCATTTGGTGGGTCATGGT | + |
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Preference number: 3 (lower is better) Translates to: GQPMEVLVALRP*ESWGSHLVGHG Trigger: ACCATGACCCACCAAATGGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAACCAGAACCTCCATAGGTTGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| 3UTR-3UTR CAA 90 bp | TGGAGGTTCTGGTTGCCCTCAGGCCCTGGGAAAGCTGGGGATCCCATTTGGTGGGGATGCTTAAGACAGTaGACCGCATCCAATAGGCTG | + |
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Preference number: 3 (lower is better) Translates to: WRFWLPSGPGKAGDPIWWGCLRQ*TASNRL Trigger: CAGCCTATTGGATGCGGTCAACTGTCTTAAGCATCC...CCACCAAATGGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAACCAGAACCTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| 3UTR GCA 72 bp | GTGTTGGATTTGGGCTCAGTTTGGTCCCAGGGTAGATaGTGCCCCTTCTGTGTGTCACCTTGGAGATGGCCA | + |
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Preference number: 3 (lower is better) Translates to: VLDLGSVWSQGR*CPFCVSPWRWP Trigger: TGGCCATCTCCAAGGTGACACACAGAAGGGGCAGCATCTACCCTGGGACCAAACTGAGCCCAAATCCAACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| 3UTR-3UTR CAA 90 bp | GGTTCTGGTTGCCCTCAGGCCCTGGGAAAGCTGGGGATCCCATTTGGTGGGTCATCCAAACATGTTGTGTaGGATTTGGGCTCAGTTTGG | + |
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Preference number: 3 (lower is better) Translates to: GSGCPQALGKLGIPFGGSSKHVV*DLGSVW Trigger: CCAAACTGAGCCCAAATCCAACACAACATGTTTGGA...TGACCCACCAAATGGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAACCAGAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| 3UTR TCA 72 bp | AGCTCTCAGCTGCCCCAGAAATCAAATCAGACTCTGTaGCCCAAGGCTTCCTCTGAGTGTAAGGCACATGAT | + |
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Preference number: 3 (lower is better) Translates to: SSQLPQKSNQTL*PKASSECKAHD Trigger: ATCATGTGCCTTACACTCAGAGGAAGCCTTGGGTCACAGAGTCTGATTTGATTTCTGGGGCAGCTGAGAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| 3UTR CCA 72 bp | TCCCAGGGTAGATGCTGCCCCTTCTGTGTGTCACCTTaGAGATGGCCAACCAGAGTATATACTGAAGATGTA | + |
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Preference number: 3 (lower is better) Translates to: SQGRCCPFCVSP*RWPTRVYTEDV Trigger: TACATCTTCAGTATATACTCTGGTTGGCCATCTCCAAGGTGACACACAGAAGGGGCAGCATCTACCCTGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| 3UTR TCA 72 bp | TTTGGAGGGGTGATCTTTGACCTGTCACACTGGCCCTaGGCTTTGCTAACTAAAGCTTTTAGCTCTCAGCTG | + |
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Preference number: 3 (lower is better) Translates to: FGGVIFDLSHWP*ALLTKAFSSQL Trigger: CAGCTGAGAGCTAAAAGCTTTAGTTAGCAAAGCTCAGGGCCAGTGTGACAGGTCAAAGATCACCCCTCCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR TCA 90 bp | GGTTCTGGTTGCCCTCAGGCCCTGGGAAAGCTGGGGATCCCATTTGGTGGGTCAGGCCCGGAGCCTGCATaGGGTCCCCTTGGGGTTCGC | + |
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Preference number: 4 (lower is better) Translates to: GSGCPQALGKLGIPFGGSGPEPA*GPLGVR Trigger: GCGAACCCCAAGGGGACCTCATGCAGGCTCCGGGCC...TGACCCACCAAATGGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAACCAGAACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR TCA 90 bp | GTTCTGGTTGCCCTCAGGCCCTGGGAAAGCTGGGGATCCCATTTGGTGGGTCATAGGGCCGGCAGCTGCTaGGGAGGGCGTGGACTCCAG | + |
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Preference number: 4 (lower is better) Translates to: VLVALRPWESWGSHLVGHRAGSC*GGRGLQ Trigger: CTGGAGTCCACGCCCTCCTCAGCAGCTGCCGGCCCT...ATGACCCACCAAATGGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAACCAGAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR GCA 90 bp | TGGTCCCAGGGTAGATGCTGCCCCTTCTGTGTGTCACCTTGGAGATGGCCAACCGATGGGACCTGGGCCTaGCAGCCCAGGGGGTGGACA | + |
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Preference number: 4 (lower is better) Translates to: WSQGRCCPFCVSPWRWPTDGTWA*QPRGWT Trigger: TGTCCACCCCCTGGGCTGGCAGGCCCAGGTCCCATC...GGTTGGCCATCTCCAAGGTGACACACAGAAGGGGCAGCATCTACCCTGGGACCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR CCA 90 bp | AGTGAGCTGGCGCTAGGGGGCGCGCTGTTGCTTCTTTTCCGACACTTTCCTTGCCTTGAGGAAGCGCCCTaGGCTGCCTGCTGGGCCCTC | + |
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Preference number: 4 (lower is better) Translates to: SELALGGALLLLFRHFPCLEEAP*AACWAL Trigger: GAGGGCCCAGCAGGCAGCCCAGGGCGCTTCCTCAAG...GCAAGGAAAGTGTCGGAAAAGAAGCAACAGCGCGCCCCCTAGCGCCAGCTCACT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR CCA 90 bp | CCTATGGAGGTTCTGGTTGCCCTCAGGCCCTGGGAAAGCTGGGGATCCCATTTGGGAGCCGCCGCTGCCTaGAGGTGCCAGTTCACCTGC | + |
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Preference number: 4 (lower is better) Translates to: PMEVLVALRPWESWGSHLGAAAA*RCQFTC Trigger: GCAGGTGAACTGGCACCTCCAGGCAGCGGCGGCTCC...CAAATGGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAACCAGAACCTCCATAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR TCA 90 bp | TGGTCCCAGGGTAGATGCTGCCCCTTCTGTGTGTCACCTTGGAGATGGCCAACCGCTGTGTGGGGGCAGTaGGGGTGTCCTCTCTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: WSQGRCCPFCVSPWRWPTAVWGQ*GCPLWR Trigger: CCTCCAGAGAGGACACCCTCACTGCCCCCACACAGC...GGTTGGCCATCTCCAAGGTGACACACAGAAGGGGCAGCATCTACCCTGGGACCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR TCA 90 bp | TGGTCCCAGGGTAGATGCTGCCCCTTCTGTGTGTCACCTTGGAGATGGCCAACCGGGAAGAGTGGCTGGTaGCCTTCGGCGTTGGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: WSQGRCCPFCVSPWRWPTGKSGW*PSALAW Trigger: CCAGGCCAACGCCGAAGGTCACCAGCCACTCTTCCC...GGTTGGCCATCTCCAAGGTGACACACAGAAGGGGCAGCATCTACCCTGGGACCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR CCA 90 bp | GTTCTGGTTGCCCTCAGGCCCTGGGAAAGCTGGGGATCCCATTTGGTGGGTCATCAGCTGATGGTGCCATaGGCCGGATGGGACCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: VLVALRPWESWGSHLVGHQLMVP*AGWDLG Trigger: GCCCAGGTCCCATCCGGCCCATGGCACCATCAGCTG...ATGACCCACCAAATGGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAACCAGAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR CCA 90 bp | GGTTCTGGTTGCCCTCAGGCCCTGGGAAAGCTGGGGATCCCATTTGGTGGGTCAGCTTGGCACCGTGGCTaGGTGGTGTGTGGGCAGGTA | + |
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Preference number: 4 (lower is better) Translates to: GSGCPQALGKLGIPFGGSAWHRG*VVCGQV Trigger: TACCTGCCCACACACCACCCAGCCACGGTGCCAAGC...TGACCCACCAAATGGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAACCAGAACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR CCA 90 bp | GGTTCTGGTTGCCCTCAGGCCCTGGGAAAGCTGGGGATCCCATTTGGTGGGTCATGCCAGACAAGGCCCTaGGGGGAAGCAATGGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: GSGCPQALGKLGIPFGGSCQTRP*GEAMGC Trigger: GCAGCCCATTGCTTCCCCCCAGGGCCTTGTCTGGCA...TGACCCACCAAATGGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAACCAGAACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR GCA 90 bp | TGGTCCCAGGGTAGATGCTGCCCCTTCTGTGTGTCACCTTGGAGATGGCCAACCGGTCTGGAGATGCGATaGTGGGGCTGTGTGGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: WSQGRCCPFCVSPWRWPTGLEMR*WGCVGA Trigger: TGCCCCCACACAGCCCCAGCATCGCATCTCCAGACC...GGTTGGCCATCTCCAAGGTGACACACAGAAGGGGCAGCATCTACCCTGGGACCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR GCA 90 bp | GGTTCTGGTTGCCCTCAGGCCCTGGGAAAGCTGGGGATCCCATTTGGTGGGTCAGGGGAAGCAATGGGCTaGTGGTGGGGGTGGCAACAT | + |
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Preference number: 4 (lower is better) Translates to: GSGCPQALGKLGIPFGGSGEAMG*WWGWQH Trigger: ATGTTGCCACCCCCACCAGCAGCCCATTGCTTCCCC...TGACCCACCAAATGGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAACCAGAACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR CCA 90 bp | GTTCTGGTTGCCCTCAGGCCCTGGGAAAGCTGGGGATCCCATTTGGTGGGTCATTGCATGAGGTCCCCTTaGGGTTCGCCCTCCAGTCGG | + |
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Preference number: 4 (lower is better) Translates to: VLVALRPWESWGSHLVGHCMRSP*GSPSSR Trigger: CCGACTGGAGGGCGAACCCCAAGGGGACCTCATGCA...ATGACCCACCAAATGGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAACCAGAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR CCA 90 bp | GGTTCTGGTTGCCCTCAGGCCCTGGGAAAGCTGGGGATCCCATTTGGTGGGTCAGGTTCTTGCCAGGCATaGGGCCTGGAGCTGGATGCA | + |
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Preference number: 4 (lower is better) Translates to: GSGCPQALGKLGIPFGGSGSCQA*GLELDA Trigger: TGCATCCAGCTCCAGGCCCCATGCCTGGCAAGAACC...TGACCCACCAAATGGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAACCAGAACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR CCA 90 bp | TGGAGGTTCTGGTTGCCCTCAGGCCCTGGGAAAGCTGGGGATCCCATTTGGTGGATCAGCTTGGCACCGTaGCTGGGTGGTGTGTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: WRFWLPSGPGKAGDPIWWISLAP*LGGVWA Trigger: TGCCCACACACCACCCAGCCACGGTGCCAAGCTGAT...CCACCAAATGGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAACCAGAACCTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR TCA 90 bp | AGTGAGCTGGCGCTAGGGGGCGCGCTGTTGCTTCTTTTCCGACACTTTCCTTGCGTGCATGGTCCTGGCTaGGGAAGGCTCAGCCATCAG | + |
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Preference number: 4 (lower is better) Translates to: SELALGGALLLLFRHFPCVHGPG*GRLSHQ Trigger: CTGATGGCTGAGCCTTCCTCAGCCAGGACCATGCAC...GCAAGGAAAGTGTCGGAAAAGAAGCAACAGCGCGCCCCCTAGCGCCAGCTCACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR GCA 90 bp | GGTTCTGGTTGCCCTCAGGCCCTGGGAAAGCTGGGGATCCCATTTGGTGGGTCAAGTGTGACGTCAGACTaGGGAGGGAGTAGCGACACC | + |
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Preference number: 4 (lower is better) Translates to: GSGCPQALGKLGIPFGGSSVTSD*GGSSDT Trigger: GGTGTCGCTACTCCCTCCGCAGTCTGACGTCACACT...TGACCCACCAAATGGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAACCAGAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR GCA 90 bp | TGGTCCCAGGGTAGATGCTGCCCCTTCTGTGTGTCACCTTGGAGATGGCCAACCGCCGCTGCCTGGAGGTaGCAGTTCACCTGCCTCATT | + |
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Preference number: 4 (lower is better) Translates to: WSQGRCCPFCVSPWRWPTAAAWR*QFTCLI Trigger: AATGAGGCAGGTGAACTGGCACCTCCAGGCAGCGGC...GGTTGGCCATCTCCAAGGTGACACACAGAAGGGGCAGCATCTACCCTGGGACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR CCA 90 bp | TGGAGGTTCTGGTTGCCCTCAGGCCCTGGGAAAGCTGGGGATCCCATTTGGTGGAGCATGCTTGTTCTGTaGGGCAGGGGAGTCTGGGAG | + |
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Preference number: 4 (lower is better) Translates to: WRFWLPSGPGKAGDPIWWSMLVL*GRGVWE Trigger: CTCCCAGACTCCCCTGCCCCACAGAACAAGCATGCT...CCACCAAATGGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAACCAGAACCTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR CCA 90 bp | GTTCTGGTTGCCCTCAGGCCCTGGGAAAGCTGGGGATCCCATTTGGTGGGTCATGCTGTGCAGTGGCCCTaGATCTGCTCTGGGTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VLVALRPWESWGSHLVGHAVQWP*ICSGSG Trigger: TCCAGACCCAGAGCAGATCCAGGGCCACTGCACAGC...ATGACCCACCAAATGGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAACCAGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR CCA 90 bp | TGGTCCCAGGGTAGATGCTGCCCCTTCTGTGTGTCACCTTGGAGATGGCCAACCGCACCAAGCCTCTGCTaGGAAGCTAGGCAGGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: WSQGRCCPFCVSPWRWPTAPSLC*EARQEG Trigger: GCCTTCCTGCCTAGCTTCCCAGCAGAGGCTTGGTGC...GGTTGGCCATCTCCAAGGTGACACACAGAAGGGGCAGCATCTACCCTGGGACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR CCA 90 bp | CCTATGGAGGTTCTGGTTGCCCTCAGGCCCTGGGAAAGCTGGGGATCCCATTTGGGGAACAATGGCTGCTaGTGTCCAGAAGGGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PMEVLVALRPWESWGSHLGNNGC*CPEGAR Trigger: CCTGGCCCCTTCTGGACACCAGCAGCCATTGTTCCC...CAAATGGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAACCAGAACCTCCATAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR CCA 90 bp | AGTGAGCTGGCGCTAGGGGGCGCGCTGTTGCTTCTTTTCCGACACTTTCCTTGCTGGCTGGGTGGTGTGTaGGCAGGTAGAGGTGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SELALGGALLLLFRHFPCWLGGV*AGRGES Trigger: GGACTCACCTCTACCTGCCCACACACCACCCAGCCA...GCAAGGAAAGTGTCGGAAAAGAAGCAACAGCGCGCCCCCTAGCGCCAGCTCACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR CCA 90 bp | GTTCTGGTTGCCCTCAGGCCCTGGGAAAGCTGGGGATCCCATTTGGTGGGTCATGCAATGGGCTGCTGGTaGGGGTGGCAACATGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VLVALRPWESWGSHLVGHAMGCW*GWQHGG Trigger: TCCTCCATGTTGCCACCCCCACCAGCAGCCCATTGC...ATGACCCACCAAATGGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAACCAGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR CCA 90 bp | GGTTCTGGTTGCCCTCAGGCCCTGGGAAAGCTGGGGATCCCATTTGGTGGGTCAGAAGCAATGGGCTGCTaGTGGGGGTGGCAACATGGA | + |
|
Preference number: 4 (lower is better) Translates to: GSGCPQALGKLGIPFGGSEAMGC*WGWQHG Trigger: TCCATGTTGCCACCCCCACCAGCAGCCCATTGCTTC...TGACCCACCAAATGGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAACCAGAACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| 3UTR CAA 72 bp | GTTGCCCTCAGGCCCTGGGAAAGCTGGGGATCCCATTaGGTGGGTCATGGTGGGCATCTGAGTCACAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VALRPWESWGSH*VGHGGHLSHSS Trigger: TGAGCTGTGACTCAGATGCCCACCATGACCCACCAAATGGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR TCA 90 bp | GGTTCTGGTTGCCCTCAGGCCCTGGGAAAGCTGGGGATCCCATTTGGTGGGTCACGATTTTGGAAGGATTaGGGGCCCACAGACAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GSGCPQALGKLGIPFGGSRFWKD*GPTDSP Trigger: AGGGCTGTCTGTGGGCCCTCAATCCTTCCAAAATCG...TGACCCACCAAATGGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAACCAGAACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR CCA 90 bp | CCTATGGAGGTTCTGGTTGCCCTCAGGCCCTGGGAAAGCTGGGGATCCCATTTGCAGTCGGGTGGAGCCTaGAAGTGTGACGTCAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: PMEVLVALRPWESWGSHLQSGGA*KCDVRL Trigger: CAGTCTGACGTCACACTTCCAGGCTCCACCCGACTG...CAAATGGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAACCAGAACCTCCATAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR CCA 90 bp | GCCAAGTCTGTAGAGCACATGGGGATTGGGATGAGGTTTGGAGGGGTGATCTTTTGGGGCAGGGGAGTCTaGGAGGCCCGGAGCCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: AKSVEHMGIGMRFGGVIFWGRGV*EARSLH Trigger: ATGCAGGCTCCGGGCCTCCCAGACTCCCCTGCCCCA...AAAGATCACCCCTCCAAACCTCATCCCAATCCCCATGTGCTCTACAGACTTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR CCA 90 bp | GTTCTGGTTGCCCTCAGGCCCTGGGAAAGCTGGGGATCCCATTTGGTGGGTCATGCCCTGGATCTGCTCTaGGTCTGGAGATGCGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: VLVALRPWESWGSHLVGHALDLL*VWRCDA Trigger: AGCATCGCATCTCCAGACCCAGAGCAGATCCAGGGC...ATGACCCACCAAATGGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAACCAGAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR CCA 90 bp | CCTATGGAGGTTCTGGTTGCCCTCAGGCCCTGGGAAAGCTGGGGATCCCATTTGGGGTGGAAAGGCATGTaGTTGCCCTTGAGGAAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: PMEVLVALRPWESWGSHLGWKGM*LPLRKR Trigger: GCGCTTCCTCAAGGGCAACCACATGCCTTTCCACCC...CAAATGGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAACCAGAACCTCCATAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR CCA 90 bp | GGTTCTGGTTGCCCTCAGGCCCTGGGAAAGCTGGGGATCCCATTTGGTGGGTCACCACTGTCCAGAGCTTaGGGCTTGACCTTGACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GSGCPQALGKLGIPFGGSPLSRA*GLTLTS Trigger: AGAGGTCAAGGTCAAGCCCCAAGCTCTGGACAGTGG...TGACCCACCAAATGGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAACCAGAACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR CCA 90 bp | CCTATGGAGGTTCTGGTTGCCCTCAGGCCCTGGGAAAGCTGGGGATCCCATTTGGGGCTTTGGGAAGAGTaGCTGGTGACCTTCGGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: PMEVLVALRPWESWGSHLGLWEE*LVTFGV Trigger: AACGCCGAAGGTCACCAGCCACTCTTCCCAAAGCCC...CAAATGGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAACCAGAACCTCCATAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR CCA 90 bp | GCCAAGTCTGTAGAGCACATGGGGATTGGGATGAGGTTTGGAGGGGTGATCTTTTGCCAGCCCAGGGGGTaGACAGCCCAGCAGCGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: AKSVEHMGIGMRFGGVIFCQPRG*TAQQRR Trigger: TCTCCGCTGCTGGGCTGTCCACCCCCTGGGCTGGCA...AAAGATCACCCCTCCAAACCTCATCCCAATCCCCATGTGCTCTACAGACTTGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR CCA 90 bp | TGCCCCAGAAATCAAATCAGACTCTGTGACCCAAGGCTTCCTCTGAGTGTAAGGGTGCCATGGGCCGGATaGGACCTGGGCCTGCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: CPRNQIRLCDPRLPLSVRVPWAG*DLGLPA Trigger: GGCTGGCAGGCCCAGGTCCCATCCGGCCCATGGCAC...CCTTACACTCAGAGGAAGCCTTGGGTCACAGAGTCTGATTTGATTTCTGGGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR CCA 90 bp | TGGAGGTTCTGGTTGCCCTCAGGCCCTGGGAAAGCTGGGGATCCCATTTGGTGGATGCCCATCTGGCTGTaGGAACAATGGCTGCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: WRFWLPSGPGKAGDPIWWMPIWL*EQWLLV Trigger: CACCAGCAGCCATTGTTCCCACAGCCAGATGGGCAT...CCACCAAATGGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAACCAGAACCTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR CCA 90 bp | CCTATGGAGGTTCTGGTTGCCCTCAGGCCCTGGGAAAGCTGGGGATCCCATTTGCTGCTGAGGAGGGCGTaGACTCCAGTTCCACAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PMEVLVALRPWESWGSHLLLRRA*TPVPQR Trigger: CCTTTGTGGAACTGGAGTCCACGCCCTCCTCAGCAG...CAAATGGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAACCAGAACCTCCATAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR TCA 90 bp | CCTATGGAGGTTCTGGTTGCCCTCAGGCCCTGGGAAAGCTGGGGATCCCATTTGGCTTCCAGTGCCCCCTaGGTCTTAAAGGAGTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PMEVLVALRPWESWGSHLASSAP*VLKECP Trigger: TGGACACTCCTTTAAGACTCAGGGGGCACTGGAAGC...CAAATGGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAACCAGAACCTCCATAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
||
| CDS-3UTR TCA 90 bp | TGGAGGTTCTGGTTGCCCTCAGGCCCTGGGAAAGCTGGGGATCCCATTTGGTGGCCCTTTTGTCTCCAATaGGGCTGTCCAGCTCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: WRFWLPSGPGKAGDPIWWPFCLQ*GCPALL Trigger: CAGAAGAGCTGGACAGCCTCATTGGAGACAAAAGGG...CCACCAAATGGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAACCAGAACCTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR GCA 90 bp | GGTTCTGGTTGCCCTCAGGCCCTGGGAAAGCTGGGGATCCCATTTGGTGGGTCAATTGCACCAAGCCTCTaGTGGGAAGCTAGGCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GSGCPQALGKLGIPFGGSIAPSL*WEARQE Trigger: TTCCTGCCTAGCTTCCCAGCAGAGGCTTGGTGCAAT...TGACCCACCAAATGGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAACCAGAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR GCA 90 bp | GGTTCTGGTTGCCCTCAGGCCCTGGGAAAGCTGGGGATCCCATTTGGTGGGTCACTGTCATCCTTCAGCTaGTCCCACAGATTTCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GSGCPQALGKLGIPFGGSLSSFS*SHRFPW Trigger: CCAGGGAAATCTGTGGGAGCAGCTGAAGGATGACAG...TGACCCACCAAATGGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAACCAGAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR CCA 90 bp | TGGAGGTTCTGGTTGCCCTCAGGCCCTGGGAAAGCTGGGGATCCCATTTGGTGGCTCAAGATGCCCATCTaGCTGTGGGAACAATGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WRFWLPSGPGKAGDPIWWLKMPI*LWEQWL Trigger: CAGCCATTGTTCCCACAGCCAGATGGGCATCTTGAG...CCACCAAATGGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAACCAGAACCTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR CCA 90 bp | GTTCTGGTTGCCCTCAGGCCCTGGGAAAGCTGGGGATCCCATTTGGTGGGTCATTATCGTGCATGGTCCTaGCTGAGGAAGGCTCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VLVALRPWESWGSHLVGHYRAWS*LRKAQP Trigger: TGGCTGAGCCTTCCTCAGCCAGGACCATGCACGATA...ATGACCCACCAAATGGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAACCAGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| 3UTR CAA 72 bp | TCGTGTGAGCTTGGGGACAACCTATGGAGGTTCTGGTaGCCCTCAGGCCCTGGGAAAGCTGGGGATCCCATT | + |
|
Preference number: 4 (lower is better) Translates to: SCELGDNLWRFW*PSGPGKAGDPI Trigger: AATGGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAACCAGAACCTCCATAGGTTGTCCCCAAGCTCACACGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR TCA 90 bp | TGGAGGTTCTGGTTGCCCTCAGGCCCTGGGAAAGCTGGGGATCCCATTTGGTGGGCCAGGATACTTTTCTaGAGGAGAAAGGCGGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: WRFWLPSGPGKAGDPIWWARILF*RRKAEG Trigger: TCCTTCCGCCTTTCTCCTTCAGAAAAGTATCCTGGC...CCACCAAATGGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAACCAGAACCTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR GCA 90 bp | GCCAAGTCTGTAGAGCACATGGGGATTGGGATGAGGTTTGGAGGGGTGATCTTTCCACCCAGTAGGTCCTaGAGGGGGTTCTTGCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: AKSVEHMGIGMRFGGVIFPPSRS*RGFLPG Trigger: GCCTGGCAAGAACCCCCTGCAGGACCTACTGGGTGG...AAAGATCACCCCTCCAAACCTCATCCCAATCCCCATGTGCTCTACAGACTTGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR CCA 90 bp | AGTGAGCTGGCGCTAGGGGGCGCGCTGTTGCTTCTTTTCCGACACTTTCCTTGCCCAGCTCTTCTGGTTTaGCCATGCTTTTGCGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: SELALGGALLLLFRHFPCPALLV*PCFCAQ Trigger: CTGTGCGCAAAAGCATGGCCAAACCAGAAGAGCTGG...GCAAGGAAAGTGTCGGAAAAGAAGCAACAGCGCGCCCCCTAGCGCCAGCTCACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR CCA 90 bp | GCCAAGTCTGTAGAGCACATGGGGATTGGGATGAGGTTTGGAGGGGTGATCTTTGCCAGGCATGGGGCCTaGAGCTGGATGCATTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: AKSVEHMGIGMRFGGVIFARHGA*SWMHWV Trigger: CACCCAATGCATCCAGCTCCAGGCCCCATGCCTGGC...AAAGATCACCCCTCCAAACCTCATCCCAATCCCCATGTGCTCTACAGACTTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR CCA 90 bp | AGTGAGCTGGCGCTAGGGGGCGCGCTGTTGCTTCTTTTCCGACACTTTCCTTGCGTAGAGTATCGTGCATaGTCCTGGCTGAGGAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SELALGGALLLLFRHFPCVEYRA*SWLRKA Trigger: AGCCTTCCTCAGCCAGGACCATGCACGATACTCTAC...GCAAGGAAAGTGTCGGAAAAGAAGCAACAGCGCGCCCCCTAGCGCCAGCTCACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR GCA 90 bp | TGGAGGTTCTGGTTGCCCTCAGGCCCTGGGAAAGCTGGGGATCCCATTTGGTGGTTGACCTCTGACCCCTaGAGAATTTGGTTGTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: WRFWLPSGPGKAGDPIWWLTSDP*RIWLCS Trigger: GGAACACAACCAAATTCTGCAGGGGTCAGAGGTCAA...CCACCAAATGGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAACCAGAACCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR GCA 90 bp | AGTGAGCTGGCGCTAGGGGGCGCGCTGTTGCTTCTTTTCCGACACTTTCCTTGCCTTCTGGTTTGGCCATaGTTTTGCGCACAGCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: SELALGGALLLLFRHFPCLLVWP*FCAQQW Trigger: CCATTGCTGTGCGCAAAAGCATGGCCAAACCAGAAG...GCAAGGAAAGTGTCGGAAAAGAAGCAACAGCGCGCCCCCTAGCGCCAGCTCACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR GCA 90 bp | TGCCCCAGAAATCAAATCAGACTCTGTGACCCAAGGCTTCCTCTGAGTGTAAGGGGGCCTGGAGCTGGATaGATTGGGTGCAGAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CPRNQIRLCDPRLPLSVRGPGAG*IGCRGW Trigger: CCAGCCTCTGCACCCAATGCATCCAGCTCCAGGCCC...CCTTACACTCAGAGGAAGCCTTGGGTCACAGAGTCTGATTTGATTTCTGGGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR CCA 90 bp | CCTATGGAGGTTCTGGTTGCCCTCAGGCCCTGGGAAAGCTGGGGATCCCATTTGTTTTGCGCACAGCAATaGGGTCTTTCCTCTTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: PMEVLVALRPWESWGSHLFCAQQ*GLSSST Trigger: AGTGGAAGAGGAAAGACCCCATTGCTGTGCGCAAAA...CAAATGGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAACCAGAACCTCCATAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR GCA 90 bp | GTTCTGGTTGCCCTCAGGCCCTGGGAAAGCTGGGGATCCCATTTGGTGGGTCATTTCCTCTTCCACTTCTaGAGTTCTTCCTGCATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VLVALRPWESWGSHLVGHFLFHF*SSSCIL Trigger: CAAGATGCAGGAAGAACTGCAGAAGTGGAAGAGGAA...ATGACCCACCAAATGGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAACCAGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR GCA 90 bp | TGCCCCAGAAATCAAATCAGACTCTGTGACCCAAGGCTTCCTCTGAGTGTAAGGTGTGGGAACAATGGCTaGTGGTGTCCAGAAGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: CPRNQIRLCDPRLPLSVRCGNNG*WCPEGA Trigger: GGCCCCTTCTGGACACCAGCAGCCATTGTTCCCACA...CCTTACACTCAGAGGAAGCCTTGGGTCACAGAGTCTGATTTGATTTCTGGGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR GCA 90 bp | CCTATGGAGGTTCTGGTTGCCCTCAGGCCCTGGGAAAGCTGGGGATCCCATTTGTTCTGCAGTTCTTCCTaGATCTTGTCGATTTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PMEVLVALRPWESWGSHLFCSSS*ILSILE Trigger: TTCCAAAATCGACAAGATGCAGGAAGAACTGCAGAA...CAAATGGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAACCAGAACCTCCATAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR GCA 90 bp | GCCAAGTCTGTAGAGCACATGGGGATTGGGATGAGGTTTGGAGGGGTGATCTTTGTTTGGCCATGCTTTTaGGCACAGCAATGGGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: AKSVEHMGIGMRFGGVIFVWPCF*AQQWGL Trigger: AAGACCCCATTGCTGTGCGCAAAAGCATGGCCAAAC...AAAGATCACCCCTCCAAACCTCATCCCAATCCCCATGTGCTCTACAGACTTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR GCA 90 bp | TGCCCCAGAAATCAAATCAGACTCTGTGACCCAAGGCTTCCTCTGAGTGTAAGGGTTCACCTGCCTCATTaGCTGTTTCTGCCAGACAAG | + |
|
Preference number: 4 (lower is better) Translates to: CPRNQIRLCDPRLPLSVRVHLPH*LFLPDK Trigger: CTTGTCTGGCAGAAACAGGCAATGAGGCAGGTGAAC...CCTTACACTCAGAGGAAGCCTTGGGTCACAGAGTCTGATTTGATTTCTGGGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR CCA 90 bp | GCCAAGTCTGTAGAGCACATGGGGATTGGGATGAGGTTTGGAGGGGTGATCTTTTGCTGTAAGAGTAGATaGGCTTTGGGAAGAGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: AKSVEHMGIGMRFGGVIFCCKSR*ALGRVA Trigger: AGCCACTCTTCCCAAAGCCCATCTACTCTTACAGCA...AAAGATCACCCCTCCAAACCTCATCCCAATCCCCATGTGCTCTACAGACTTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| 3UTR CAA 72 bp | CCAATAGGCTGGGGCTTGAACTATATGAACCTCTCATaGAGAAAGAGTGAGACTTGGCAACCTGAAGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PIGWGLNYMNLS*RKSETWQPEGG Trigger: GCCCCCTTCAGGTTGCCAAGTCTCACTCTTTCTCAATGAGAGGTTCATATAGTTCAAGCCCCAGCCTATTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
||
| CDS-3UTR CCA 90 bp | TGCCCCAGAAATCAAATCAGACTCTGTGACCCAAGGCTTCCTCTGAGTGTAAGGTCCCACAGATTTCCCTaGAAGTCGAAGTCAGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: CPRNQIRLCDPRLPLSVRSHRFP*KSKSVR Trigger: TCTCACTGACTTCGACTTCCAGGGAAATCTGTGGGA...CCTTACACTCAGAGGAAGCCTTGGGTCACAGAGTCTGATTTGATTTCTGGGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
||
| CDS GCA 90 bp | CGGAAGGAGCCCGGGCCGGGTCCGGCTGTGCAGTGGCCCTGGATCTaGTCTGGGTCTGGAGATGCGATGCTGGGGCTGTGTGGGGGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: RKEPGPGPAVQWPWI*SGSGDAMLGLCGGS Trigger: ACTGCCCCCACACAGCCCCAGCATCGCATCTCCAGACCCAGAGCAGATCCAGGGCCACTGCACAGCCGGACCCGGCCCGGGCTCCTTCCG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
||
| CDS CCA 90 bp | GGTGCAGAGGCTGGGAAAGACCAGCTGATGGTGCCATGGGCCGGATaGGACCTGGGCCTGCCAGCCCAGGGGGTGGACAGCCCAGCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: GAEAGKDQLMVPWAG*DLGLPAQGVDSPAA Trigger: CGCTGCTGGGCTGTCCACCCCCTGGGCTGGCAGGCCCAGGTCCCATCCGGCCCATGGCACCATCAGCTGGTCTTTCCCAGCCTCTGCACC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
||
| CDS GCA 90 bp | CGGCTGTGCAGTGGCCCTGGATCTGCTCTGGGTCTGGAGATGCGATaGTGGGGCTGTGTGGGGGCAGTGAGGGTGTCCTCTCTGGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RLCSGPGSALGLEMR*WGCVGAVRVSSLEG Trigger: GCCCTCCAGAGAGGACACCCTCACTGCCCCCACACAGCCCCAGCATCGCATCTCCAGACCCAGAGCAGATCCAGGGCCACTGCACAGCCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
||
| CDS CCA 90 bp | CTGTGCAGTGGCCCTGGATCTGCTCTGGGTCTGGAGATGCGATGCTaGGGCTGTGTGGGGGCAGTGAGGGTGTCCTCTCTGGAGGGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: LCSGPGSALGLEMRC*GCVGAVRVSSLEGR Trigger: ACGGCCCTCCAGAGAGGACACCCTCACTGCCCCCACACAGCCCCAGCATCGCATCTCCAGACCCAGAGCAGATCCAGGGCCACTGCACAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
||
| CDS GCA 90 bp | TTTCTGAAGGAGAAAGGCGGAAGGAGCCCGGGCCGGGTCCGGCTGTaGAGTGGCCCTGGATCTGCTCTGGGTCTGGAGATGCGATGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: FLKEKGGRSPGRVRL*SGPGSALGLEMRCW Trigger: CCAGCATCGCATCTCCAGACCCAGAGCAGATCCAGGGCCACTGCACAGCCGGACCCGGCCCGGGCTCCTTCCGCCTTTCTCCTTCAGAAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
||
| CDS GCA 90 bp | GAGGTGCATGTCTCCCAGAGCACCGGAGCCGCCGCTGCCTGGAGGTaGCAGTTCACCTGCCTCATTGCCTGTTTCTGCCAGACAAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: EVHVSQSTGAAAAWR*QFTCLIACFCQTRP Trigger: GGGCCTTGTCTGGCAGAAACAGGCAATGAGGCAGGTGAACTGGCACCTCCAGGCAGCGGCGGCTCCGGTGCTCTGGGAGACATGCACCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
||
| CDS-3UTR CAA 90 bp | TGGAGGTTCTGGTTGCCCTCAGGCCCTGGGAAAGCTGGGGATCCCATTTGGTGGCTGCATGAGGTCCCCTaGGGGTTCGCCCTCCAGTCG | + |
|
Preference number: 5 (lower is better) Translates to: WRFWLPSGPGKAGDPIWWLHEVP*GFALQS Trigger: CGACTGGAGGGCGAACCCCAAGGGGACCTCATGCAG...CCACCAAATGGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAACCAGAACCTCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
||
| CDS TCA 90 bp | TTCGGCGTTGGCCTGGGGTGCAATCCTCTGATAGGGATAGTGAGGTaGGCCCAGGTAGGGCACAGGGTAGCTGCCTCCACCCGGGGAGTA | + |
|
Preference number: 5 (lower is better) Translates to: FGVGLGCNPLIGIVR*AQVGHRVAASTRGV Trigger: TACTCCCCGGGTGGAGGCAGCTACCCTGTGCCCTACCTGGGCTCACCTCACTATCCCTATCAGAGGATTGCACCCCAGGCCAACGCCGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
||
| CDS-3UTR CAA 90 bp | GTTCTGGTTGCCCTCAGGCCCTGGGAAAGCTGGGGATCCCATTTGGTGGGTCATTCCTGCAGGGGGTTCTaGCCAGGCATGGGGCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: VLVALRPWESWGSHLVGHSCRGF*PGMGPG Trigger: TCCAGGCCCCATGCCTGGCAAGAACCCCCTGCAGGA...ATGACCCACCAAATGGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAACCAGAAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
||
| CDS CCA 90 bp | TGCCAGTTCACCTGCCTCATTGCCTGTTTCTGCCAGACAAGGCCCTaGGGGGAAGCAATGGGCTGCTGGTGGGGGTGGCAACATGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: CQFTCLIACFCQTRP*GEAMGCWWGWQHGG Trigger: TCCTCCATGTTGCCACCCCCACCAGCAGCCCATTGCTTCCCCCCAGGGCCTTGTCTGGCAGAAACAGGCAATGAGGCAGGTGAACTGGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
||
| CDS CCA 90 bp | CTTGTAGGGGTGGAAAGGCATGTGGTTGCCCTTGAGGAAGCGCCCTaGGCTGCCTGCTGGGCCCTCCTCAAAGCCAAAGCCAGGATACTT | + |
|
Preference number: 5 (lower is better) Translates to: LVGVERHVVALEEAP*AACWALLKAKARIL Trigger: AAGTATCCTGGCTTTGGCTTTGAGGAGGGCCCAGCAGGCAGCCCAGGGCGCTTCCTCAAGGGCAACCACATGCCTTTCCACCCCTACAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
||
| CDS CCA 90 bp | CCAGGTCAGTCCCAAGGTCTCCATCTGGCAGTAGAGTATCGTGCATaGTCCTGGCTGAGGAAGGCTCAGCCATCAGCTTGGCACCGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PGQSQGLHLAVEYRA*SWLRKAQPSAWHRG Trigger: GCCACGGTGCCAAGCTGATGGCTGAGCCTTCCTCAGCCAGGACCATGCACGATACTCTACTGCCAGATGGAGACCTTGGGACTGACCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
||
| CDS-3UTR CAA 90 bp | GGTTCTGGTTGCCCTCAGGCCCTGGGAAAGCTGGGGATCCCATTTGGTGGGTCATGGAAAGGCATGTGGTaGCCCTTGAGGAAGCGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: GSGCPQALGKLGIPFGGSWKGMW*PLRKRP Trigger: AGGGCGCTTCCTCAAGGGCAACCACATGCCTTTCCA...TGACCCACCAAATGGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAACCAGAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
||
| CDS-3UTR CAA 90 bp | GTTCTGGTTGCCCTCAGGCCCTGGGAAAGCTGGGGATCCCATTTGGTGGGTCATTCCAGAGCTTGGGGCTaGACCTTGACCTCTGACCCC | + |
|
Preference number: 5 (lower is better) Translates to: VLVALRPWESWGSHLVGHSRAWG*TLTSDP Trigger: GGGGTCAGAGGTCAAGGTCAAGCCCCAAGCTCTGGA...ATGACCCACCAAATGGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAACCAGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
||
| CDS-3UTR CAA 90 bp | GGTTCTGGTTGCCCTCAGGCCCTGGGAAAGCTGGGGATCCCATTTGGTGGGTCAACCACTGTCCAGAGCTaGGGGCTTGACCTTGACCTC | + |
|
Preference number: 5 (lower is better) Translates to: GSGCPQALGKLGIPFGGSTTVQS*GLDLDL Trigger: GAGGTCAAGGTCAAGCCCCAAGCTCTGGACAGTGGT...TGACCCACCAAATGGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAACCAGAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
||
| CDS TCA 90 bp | TCGCCCATGTCCACAGGGATCTCCTCAAAGGCTTCCAGTGCCCCCTaGGTCTTAAAGGAGTGTCCATCAAGTGCCATGGCCGTCTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SPMSTGISSKASSAP*VLKECPSSAMAVWA Trigger: GGCCCAGACGGCCATGGCACTTGATGGACACTCCTTTAAGACTCAGGGGGCACTGGAAGCCTTTGAGGAGATCCCTGTGGACATGGGCGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
||
| CDS GCA 90 bp | TCTGATAGGGATAGTGAGGTGAGCCCAGGTAGGGCACAGGGTAGCTaGCTCCACCCGGGGAGTACTGATGGAAGGCAGGCTGAGAAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: SDRDSEVSPGRAQGS*LHPGSTDGRQAEKN Trigger: GTTCTTCTCAGCCTGCCTTCCATCAGTACTCCCCGGGTGGAGGCAGCTACCCTGTGCCCTACCTGGGCTCACCTCACTATCCCTATCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
||
| CDS GCA 90 bp | GCATCCAGGTCAGTCCCAAGGTCTCCATCTGGCAGTAGAGTATCGTaGATGGTCCTGGCTGAGGAAGGCTCAGCCATCAGCTTGGCACCG | + |
|
Preference number: 5 (lower is better) Translates to: ASRSVPRSPSGSRVS*MVLAEEGSAISLAP Trigger: CGGTGCCAAGCTGATGGCTGAGCCTTCCTCAGCCAGGACCATGCACGATACTCTACTGCCAGATGGAGACCTTGGGACTGACCTGGATGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS CCA 90 bp | GTGTTCCTGGCTGGGGTAAGGGAGTTTATTGCACCAAGCCTCTGCTaGGAAGCTAGGCAGGAAGGCCTCAGCATCGCCCATGTCCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: VFLAGVREFIAPSLC*EARQEGLSIAHVHR Trigger: CCTGTGGACATGGGCGATGCTGAGGCCTTCCTGCCTAGCTTCCCAGCAGAGGCTTGGTGCAATAAACTCCCTTACCCCAGCCAGGAACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
||
| CDS-3UTR CAA 90 bp | GGTTCTGGTTGCCCTCAGGCCCTGGGAAAGCTGGGGATCCCATTTGGTGGGTCACTGAAGTTAGCATGCTaGTTCTGTGGGGCAGGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GSGCPQALGKLGIPFGGSLKLAC*FCGAGE Trigger: CTCCCCTGCCCCACAGAACAAGCATGCTAACTTCAG...TGACCCACCAAATGGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAACCAGAACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
||
| CDS-3UTR CAA 90 bp | GCCAAGTCTGTAGAGCACATGGGGATTGGGATGAGGTTTGGAGGGGTGATCTTTGGCATGTGGTTGCCCTaGAGGAAGCGCCCTGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: AKSVEHMGIGMRFGGVIFGMWLP*RKRPGL Trigger: CAGCCCAGGGCGCTTCCTCAAGGGCAACCACATGCC...AAAGATCACCCCTCCAAACCTCATCCCAATCCCCATGTGCTCTACAGACTTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR CAA 90 bp | GTTCTGGTTGCCCTCAGGCCCTGGGAAAGCTGGGGATCCCATTTGGTGGGTCATTCGATTTTGGAAGGATaGAGGGCCCACAGACAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: VLVALRPWESWGSHLVGHSILEG*RAHRQP Trigger: GGGCTGTCTGTGGGCCCTCAATCCTTCCAAAATCGA...ATGACCCACCAAATGGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAACCAGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR CAA 90 bp | CCTATGGAGGTTCTGGTTGCCCTCAGGCCCTGGGAAAGCTGGGGATCCCATTTGGGTTTGGCCATGCTTTaGCGCACAGCAATGGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PMEVLVALRPWESWGSHLGLAML*RTAMGS Trigger: AGACCCCATTGCTGTGCGCAAAAGCATGGCCAAACC...CAAATGGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAACCAGAACCTCCATAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
||
| CDS GCA 90 bp | CTCAGCATCGCCCATGTCCACAGGGATCTCCTCAAAGGCTTCCAGTaGCCCCTGAGTCTTAAAGGAGTGTCCATCAAGTGCCATGGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: LSIAHVHRDLLKGFQ*PLSLKGVSIKCHGR Trigger: ACGGCCATGGCACTTGATGGACACTCCTTTAAGACTCAGGGGGCACTGGAAGCCTTTGAGGAGATCCCTGTGGACATGGGCGATGCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS CCA 90 bp | AAGAGTAGATGGGCTTTGGGAAGAGTGGCTGGTGACCTTCGGCGTTaGCCTGGGGTGCAATCCTCTGATAGGGATAGTGAGGTGAGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: KSRWALGRVAGDLRR*PGVQSSDRDSEVSP Trigger: TGGGCTCACCTCACTATCCCTATCAGAGGATTGCACCCCAGGCCAACGCCGAAGGTCACCAGCCACTCTTCCCAAAGCCCATCTACTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR CAA 90 bp | TGGAGGTTCTGGTTGCCCTCAGGCCCTGGGAAAGCTGGGGATCCCATTTGGTGGTCAGTGAGAGAAGGGTaGATAGCATCCAGGTCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: WRFWLPSGPGKAGDPIWWSVREG*IASRSV Trigger: GACTGACCTGGATGCTATCAACCCTTCTCTCACTGA...CCACCAAATGGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAACCAGAACCTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
||
| CDS-3UTR CAA 90 bp | TGGAGGTTCTGGTTGCCCTCAGGCCCTGGGAAAGCTGGGGATCCCATTTGGTGGAGTTCACCTGCCTCATaGCCTGTTTCTGCCAGACAA | + |
|
Preference number: 5 (lower is better) Translates to: WRFWLPSGPGKAGDPIWWSSPAS*PVSARQ Trigger: TTGTCTGGCAGAAACAGGCAATGAGGCAGGTGAACT...CCACCAAATGGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAACCAGAACCTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR CAA 90 bp | TGGAGGTTCTGGTTGCCCTCAGGCCCTGGGAAAGCTGGGGATCCCATTTGGTGGAGAACAGTACATATGTaGCAAGGGAGGCTGGTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: WRFWLPSGPGKAGDPIWWRTVHM*QGRLVA Trigger: TGCTACCAGCCTCCCTTGCAACATATGTACTGTTCT...CCACCAAATGGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAACCAGAACCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR CAA 90 bp | TGGAGGTTCTGGTTGCCCTCAGGCCCTGGGAAAGCTGGGGATCCCATTTGGTGGACCTTCTCAAAGCACTaGTTGAGGGACAGGTTATGG | + |
|
Preference number: 5 (lower is better) Translates to: WRFWLPSGPGKAGDPIWWTFSKH*LRDRLW Trigger: CCATAACCTGTCCCTCAACAAGTGCTTTGAGAAGGT...CCACCAAATGGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAACCAGAACCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS GCA 90 bp | AAAGGCTTCCAGTGCCCCCTGAGTCTTAAAGGAGTGTCCATCAAGTaGCATGGCCGTCTGGGCCTCAGAGAAGATGTCCTCATGGAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: KGFQCPLSLKGVSIK*HGRLGLREDVLMEV Trigger: CACTTCCATGAGGACATCTTCTCTGAGGCCCAGACGGCCATGGCACTTGATGGACACTCCTTTAAGACTCAGGGGGCACTGGAAGCCTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR CAA 90 bp | GTTCTGGTTGCCCTCAGGCCCTGGGAAAGCTGGGGATCCCATTTGGTGGGTCATTTCTCAAAGCACTTGTaGAGGGACAGGTTATGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: VLVALRPWESWGSHLVGHFSKHL*RDRLWR Trigger: TCGCCATAACCTGTCCCTCAACAAGTGCTTTGAGAA...ATGACCCACCAAATGGGATCCCCAGCTTTCCCAGGGCCTGAGGGCAACCAGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS CCA 90 bp | CATGAAGATGAGGATGCTGTAAGAGTAGATGGGCTTTGGGAAGAGTaGCTGGTGACCTTCGGCGTTGGCCTGGGGTGCAATCCTCTGATA | + |
|
Preference number: 5 (lower is better) Translates to: HEDEDAVRVDGLWEE*LVTFGVGLGCNPLI Trigger: TATCAGAGGATTGCACCCCAGGCCAACGCCGAAGGTCACCAGCCACTCTTCCCAAAGCCCATCTACTCTTACAGCATCCTCATCTTCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR CAA 90 bp | GCCAAGTCTGTAGAGCACATGGGGATTGGGATGAGGTTTGGAGGGGTGATCTTTAAGAGTAGATGGGCTTaGGGAAGAGTGGCTGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: AKSVEHMGIGMRFGGVIFKSRWA*GRVAGD Trigger: GTCACCAGCCACTCTTCCCAAAGCCCATCTACTCTT...AAAGATCACCCCTCCAAACCTCATCCCAATCCCCATGTGCTCTACAGACTTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS-3UTR CAA 90 bp | TGCCCCAGAAATCAAATCAGACTCTGTGACCCAAGGCTTCCTCTGAGTGTAAGGTCCAGCTCTTCTGGTTaGGCCATGCTTTTGCGCACA | + |
|
Preference number: 5 (lower is better) Translates to: CPRNQIRLCDPRLPLSVRSSSSG*AMLLRT Trigger: TGTGCGCAAAAGCATGGCCAAACCAGAAGAGCTGGA...CCTTACACTCAGAGGAAGCCTTGGGTCACAGAGTCTGATTTGATTTCTGGGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS CCA 72 bp | GGGCCGGATGGGACCTGGGCCTGCCAGCCCAGGGGGTaGACAGCCCAGCAGCGGAGAGCCCAGTTTTTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: GPDGTWACQPRG*TAQQRRAQFFP Trigger: AGGGAAAAACTGGGCTCTCCGCTGCTGGGCTGTCCACCCCCTGGGCTGGCAGGCCCAGGTCCCATCCGGCCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS GCA 72 bp | CCCGGGCCGGGTCCGGCTGTGCAGTGGCCCTGGATCTaGTCTGGGTCTGGAGATGCGATGCTGGGGCTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: PGPGPAVQWPWI*SGSGDAMLGLC Trigger: ACACAGCCCCAGCATCGCATCTCCAGACCCAGAGCAGATCCAGGGCCACTGCACAGCCGGACCCGGCCCGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS CCA 72 bp | GCTGGGAAAGACCAGCTGATGGTGCCATGGGCCGGATaGGACCTGGGCCTGCCAGCCCAGGGGGTGGACAGC | + |
|
Preference number: 6 (lower is better) Translates to: AGKDQLMVPWAG*DLGLPAQGVDS Trigger: GCTGTCCACCCCCTGGGCTGGCAGGCCCAGGTCCCATCCGGCCCATGGCACCATCAGCTGGTCTTTCCCAGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS GCA 72 bp | GAGAAAGGCGGAAGGAGCCCGGGCCGGGTCCGGCTGTaGAGTGGCCCTGGATCTGCTCTGGGTCTGGAGATG | + |
|
Preference number: 6 (lower is better) Translates to: EKGGRSPGRVRL*SGPGSALGLEM Trigger: CATCTCCAGACCCAGAGCAGATCCAGGGCCACTGCACAGCCGGACCCGGCCCGGGCTCCTTCCGCCTTTCTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS CCA 72 bp | GAGTCTGGGAGGCCCGGAGCCTGCATGAGGTCCCCTTaGGGTTCGCCCTCCAGTCGGGTGGAGCCTGGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: ESGRPGACMRSP*GSPSSRVEPGS Trigger: ACTTCCAGGCTCCACCCGACTGGAGGGCGAACCCCAAGGGGACCTCATGCAGGCTCCGGGCCTCCCAGACTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
||
| CDS CAA 72 bp | GGAGCATGGCCACCCAGTAGGTCCTGCAGGGGGTTCTaGCCAGGCATGGGGCCTGGAGCTGGATGCATTGGG | + |
|
Preference number: 6 (lower is better) Translates to: GAWPPSRSCRGF*PGMGPGAGCIG Trigger: CCCAATGCATCCAGCTCCAGGCCCCATGCCTGGCAAGAACCCCCTGCAGGACCTACTGGGTGGCCATGCTCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS TCA 72 bp | GCAATGGGCTGCTGGTGGGGGTGGCAACATGGAGGATaGCGTCGGCGACGAGGTCACCAATACGAGGGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: AMGCWWGWQHGG*RRRRGHQYEGV Trigger: GACCCCCTCGTATTGGTGACCTCGTCGCCGACGTCATCCTCCATGTTGCCACCCCCACCAGCAGCCCATTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS TCA 72 bp | GGCCTGGGGTGCAATCCTCTGATAGGGATAGTGAGGTaGGCCCAGGTAGGGCACAGGGTAGCTGCCTCCACC | + |
|
Preference number: 6 (lower is better) Translates to: GLGCNPLIGIVR*AQVGHRVAAST Trigger: GGTGGAGGCAGCTACCCTGTGCCCTACCTGGGCTCACCTCACTATCCCTATCAGAGGATTGCACCCCAGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS GCA 72 bp | GATAGTGAGGTGAGCCCAGGTAGGGCACAGGGTAGCTaGCTCCACCCGGGGAGTACTGATGGAAGGCAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: DSEVSPGRAQGS*LHPGSTDGRQA Trigger: AGCCTGCCTTCCATCAGTACTCCCCGGGTGGAGGCAGCTACCCTGTGCCCTACCTGGGCTCACCTCACTATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
||
| CDS CCA 72 bp | ATGGGGCCTGGAGCTGGATGCATTGGGTGCAGAGGCTaGGAAAGACCAGCTGATGGTGCCATGGGCCGGATG | + |
|
Preference number: 6 (lower is better) Translates to: MGPGAGCIGCRG*ERPADGAMGRM Trigger: CATCCGGCCCATGGCACCATCAGCTGGTCTTTCCCAGCCTCTGCACCCAATGCATCCAGCTCCAGGCCCCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
||
| CDS CCA 72 bp | GGGGGAAGCAATGGGCTGCTGGTGGGGGTGGCAACATaGAGGATGACGTCGGCGACGAGGTCACCAATACGA | + |
|
Preference number: 6 (lower is better) Translates to: GGSNGLLVGVAT*RMTSATRSPIR Trigger: TCGTATTGGTGACCTCGTCGCCGACGTCATCCTCCATGTTGCCACCCCCACCAGCAGCCCATTGCTTCCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
||
| CDS CAA 90 bp | CCAGGGGGTGGACAGCCCAGCAGCGGAGAGCCCAGTTTTTCCCTTTaGTCTCCAATGAGGCTGTCCAGCTCTTCTGGTTTGGCCATGCTT | + |
|
Preference number: 6 (lower is better) Translates to: PGGGQPSSGEPSFSL*SPMRLSSSSGLAML Trigger: AAGCATGGCCAAACCAGAAGAGCTGGACAGCCTCATTGGAGACAAAAGGGAAAAACTGGGCTCTCCGCTGCTGGGCTGTCCACCCCCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
||
| CDS CCA 72 bp | GCTGGGGTAAGGGAGTTTATTGCACCAAGCCTCTGCTaGGAAGCTAGGCAGGAAGGCCTCAGCATCGCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: AGVREFIAPSLC*EARQEGLSIAH Trigger: ATGGGCGATGCTGAGGCCTTCCTGCCTAGCTTCCCAGCAGAGGCTTGGTGCAATAAACTCCCTTACCCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
||
| CDS CCA 72 bp | TGGGCTTTGGGAAGAGTGGCTGGTGACCTTCGGCGTTaGCCTGGGGTGCAATCCTCTGATAGGGATAGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: WALGRVAGDLRR*PGVQSSDRDSE Trigger: CTCACTATCCCTATCAGAGGATTGCACCCCAGGCCAACGCCGAAGGTCACCAGCCACTCTTCCCAAAGCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
||
| CDS GCA 72 bp | CAGTGCCCCCTGAGTCTTAAAGGAGTGTCCATCAAGTaGCATGGCCGTCTGGGCCTCAGAGAAGATGTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: QCPLSLKGVSIK*HGRLGLREDVL Trigger: GAGGACATCTTCTCTGAGGCCCAGACGGCCATGGCACTTGATGGACACTCCTTTAAGACTCAGGGGGCACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
||
| CDS GCA 72 bp | GCCCATGTCCACAGGGATCTCCTCAAAGGCTTCCAGTaGCCCCTGAGTCTTAAAGGAGTGTCCATCAAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: AHVHRDLLKGFQ*PLSLKGVSIKC Trigger: GCACTTGATGGACACTCCTTTAAGACTCAGGGGGCACTGGAAGCCTTTGAGGAGATCCCTGTGGACATGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
||
| CDS CAA 72 bp | ATCCCAGGACCACTGTCCAGAGCTTGGGGCTTGACCTaGACCTCTGACCCCTGCAGAATTTGGTTGTGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: IPGPLSRAWGLT*TSDPCRIWLCS Trigger: GGAACACAACCAAATTCTGCAGGGGTCAGAGGTCAAGGTCAAGCCCCAAGCTCTGGACAGTGGTCCTGGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
||
| CDS CCA 72 bp | GTCTTAAAGGAGTGTCCATCAAGTGCCATGGCCGTCTaGGCCTCAGAGAAGATGTCCTCATGGAAGTGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: VLKECPSSAMAV*ASEKMSSWKCL Trigger: GAGGCACTTCCATGAGGACATCTTCTCTGAGGCCCAGACGGCCATGGCACTTGATGGACACTCCTTTAAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
||
| CDS CCA 72 bp | CCTCTGACCCCTGCAGAATTTGGTTGTGTTCCTGGCTaGGGTAAGGGAGTTTATTGCACCAAGCCTCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PLTPAEFGCVPG*GKGVYCTKPLL Trigger: CAGCAGAGGCTTGGTGCAATAAACTCCCTTACCCCAGCCAGGAACACAACCAAATTCTGCAGGGGTCAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS CCA 72 bp | CATGAAGATGAGGATGCTGTAAGAGTAGATGGGCTTTaGGAAGAGTGGCTGGTGACCTTCGGCGTTGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: HEDEDAVRVDGL*EEWLVTFGVGL Trigger: CAGGCCAACGCCGAAGGTCACCAGCCACTCTTCCCAAAGCCCATCTACTCTTACAGCATCCTCATCTTCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS TCA 72 bp | GCAGCGGAGAGCCCAGTTTTTCCCTTTTGTCTCCAATaGGGCTGTCCAGCTCTTCTGGTTTGGCCATGCTTT | + |
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Preference number: 6 (lower is better) Translates to: AAESPVFPFCLQ*GCPALLVWPCF Trigger: AAAGCATGGCCAAACCAGAAGAGCTGGACAGCCTCATTGGAGACAAAAGGGAAAAACTGGGCTCTCCGCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS CAA 90 bp | TGCTCCCACAGATTTCCCTGGAAGTCGAAGTCAGTGAGAGAAGGGTaGATAGCATCCAGGTCAGTCCCAAGGTCTCCATCTGGCAGTAGA | + |
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Preference number: 6 (lower is better) Translates to: CSHRFPWKSKSVREG*IASRSVPRSPSGSR Trigger: TCTACTGCCAGATGGAGACCTTGGGACTGACCTGGATGCTATCAACCCTTCTCTCACTGACTTCGACTTCCAGGGAAATCTGTGGGAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS TCA 72 bp | GCAGTTCTTCCTGCATCTTGTCGATTTTGGAAGGATTaGGGGCCCACAGACAGCCCTTTCGAGAGGAACTTC | + |
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Preference number: 6 (lower is better) Translates to: AVLPASCRFWKD*GPTDSPFERNF Trigger: GAAGTTCCTCTCGAAAGGGCTGTCTGTGGGCCCTCAATCCTTCCAAAATCGACAAGATGCAGGAAGAACTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS CCA 72 bp | AAGCTGTCATCCTTCAGCTGCTCCCACAGATTTCCCTaGAAGTCGAAGTCAGTGAGAGAAGGGTTGATAGCA | + |
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Preference number: 6 (lower is better) Translates to: KLSSFSCSHRFP*KSKSVREGLIA Trigger: TGCTATCAACCCTTCTCTCACTGACTTCGACTTCCAGGGAAATCTGTGGGAGCAGCTGAAGGATGACAGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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| CDS CAA 72 bp | AGATTTCCCTGGAAGTCGAAGTCAGTGAGAGAAGGGTaGATAGCATCCAGGTCAGTCCCAAGGTCTCCATCT | + |
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Preference number: 6 (lower is better) Translates to: RFPWKSKSVREG*IASRSVPRSPS Trigger: AGATGGAGACCTTGGGACTGACCTGGATGCTATCAACCCTTCTCTCACTGACTTCGACTTCCAGGGAAATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108294.2 |
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