Pregenerated sensors for FOXM1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001517Ensembl transcript IDs: ENSMUST00000073316.13, ENSMUST00000112148.4, ENSMUST00000203040.3, ENSMUST00000203258.2
Found 220 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CGGGAGAGAGCATCTGTGGAAGGCCCATGCAGCAGGGGCAGGCCTTaGCCATCACCCCCAGGCTCCACCTCTCGCTCAATTCCAAGACCA | + |
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Preference number: 1 (lower is better) Translates to: RERASVEGPCSRGRP*PSPPGSTSRSIPRP Trigger: TGGTCTTGGAATTGAGCGAGAGGTGGAGCCTGGGGGTGATGGGCAAGGCCTGCCCCTGCTGCATGGGCCTTCCACAGATGCTCTCTCCCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| 3UTR GCA 90 bp | AATGGGCACTTCCTGGTCCTCATGGCTCGTCACACCCACTTCACTTaGCAGCAGGGAGTGGAGGACTCGGACTCTGGGGGATCCTACTGC | + |
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Preference number: 1 (lower is better) Translates to: NGHFLVLMARHTHFT*QQGVEDSDSGGSYC Trigger: GCAGTAGGATCCCCCAGAGTCCGAGTCCTCCACTCCCTGCTGGCAAGTGAAGTGGGTGTGACGAGCCATGAGGACCAGGAAGTGCCCATT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| 3UTR GCA 90 bp | GTTCTGGTTACAAACTTGGTAACAGGAGCTGCTGAGCGAGAGCCTTaGCTGGGAAGGCTCAGGAGCAGGAAGGGGGCTGGCTCCTGGGCT | + |
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Preference number: 1 (lower is better) Translates to: VLVTNLVTGAAEREP*LGRLRSRKGAGSWA Trigger: AGCCCAGGAGCCAGCCCCCTTCCTGCTCCTGAGCCTTCCCAGGCAAGGCTCTCGCTCAGCAGCTCCTGTTACCAAGTTTGTAACCAGAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| 3UTR TCA 90 bp | CTTTTCGCTGTCAGTTCTGGTTACAAACTTGGTAACAGGAGCTGCTaGGCGAGAGCCTTGCCTGGGAAGGCTCAGGAGCAGGAAGGGGGC | + |
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Preference number: 1 (lower is better) Translates to: LFAVSSGYKLGNRSC*ARALPGKAQEQEGG Trigger: GCCCCCTTCCTGCTCCTGAGCCTTCCCAGGCAAGGCTCTCGCTCAGCAGCTCCTGTTACCAAGTTTGTAACCAGAACTGACAGCGAAAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| 3UTR GCA 90 bp | ACTTGCCAGCAGGGAGTGGAGGACTCGGACTCTGGGGGATCCTACTaGTTGCATAGGTCCTGGTGTGGCTTAGATGCGGCTATCATCTTG | + |
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Preference number: 1 (lower is better) Translates to: TCQQGVEDSDSGGSY*LHRSWCGLDAAIIL Trigger: CAAGATGATAGCCGCATCTAAGCCACACCAGGACCTATGCAAGCAGTAGGATCCCCCAGAGTCCGAGTCCTCCACTCCCTGCTGGCAAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| 3UTR CCA 90 bp | TGTTACCAAGGGATCAACAAGGACCTAAGTCAGAGTCTGGTCCCATaGAACAAGGTCTGGGGTGGCAAGGAAGAGGTGGGCAGGGCAGGG | + |
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Preference number: 1 (lower is better) Translates to: CYQGINKDLSQSLVP*NKVWGGKEEVGRAG Trigger: CCCTGCCCTGCCCACCTCTTCCTTGCCACCCCAGACCTTGTTCCATGGGACCAGACTCTGACTTAGGTCCTTGTTGATCCCTTGGTAACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| 3UTR TCA 90 bp | GGAGCTGACACCATTTATAAGGGTTACCCTGCCAGGAGCACCGAGTaGCTAATGGGCACTTCCTGGTCCTCATGGCTCGTCACACCCACT | + |
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Preference number: 1 (lower is better) Translates to: GADTIYKGYPARSTE*LMGTSWSSWLVTPT Trigger: AGTGGGTGTGACGAGCCATGAGGACCAGGAAGTGCCCATTAGTCACTCGGTGCTCCTGGCAGGGTAACCCTTATAAATGGTGTCAGCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| 3UTR TCA 90 bp | AGCCAGGCAAGTGAGGGGTCACTTTCTCCTTCTCAGGCCTCAGCCTaGGATCTCAGTGGTAGACTCCCTGGCATGATTGGGAACACTATC | + |
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Preference number: 1 (lower is better) Translates to: SQASEGSLSPSQASA*DLSGRLPGMIGNTI Trigger: GATAGTGTTCCCAATCATGCCAGGGAGTCTACCACTGAGATCTCAGGCTGAGGCCTGAGAAGGAGAAAGTGACCCCTCACTTGCCTGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| 3UTR TCA 90 bp | AGCAGAAACTGGCTTATGTACCAGAGACTACTGCTCAGGACAACCTaGAAGGCTGGCTGCGTTGTTGGGCCCCACTCTACCTTCAGGAAA | + |
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Preference number: 1 (lower is better) Translates to: SRNWLMYQRLLLRTT*KAGCVVGPHSTFRK Trigger: TTTCCTGAAGGTAGAGTGGGGCCCAACAACGCAGCCAGCCTTTCAGGTTGTCCTGAGCAGTAGTCTCTGGTACATAAGCCAGTTTCTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| 3UTR GCA 90 bp | TACCACAGGATGAAAGCAGAAACTGGCTTATGTACCAGAGACTACTaGTCAGGACAACCTGAAAGGCTGGCTGCGTTGTTGGGCCCCACT | + |
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Preference number: 1 (lower is better) Translates to: YHRMKAETGLCTRDY*SGQPERLAALLGPT Trigger: AGTGGGGCCCAACAACGCAGCCAGCCTTTCAGGTTGTCCTGAGCAGTAGTCTCTGGTACATAAGCCAGTTTCTGCTTTCATCCTGTGGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| 3UTR TCA 90 bp | GAATCCAATAGGCTTTCACAGCAGGATTTCTTCATGCAGTACCACTaGCTTGGAGACTTGGGGAGCTGCGAGGAAAGGGCAGTAAGCAGG | + |
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Preference number: 1 (lower is better) Translates to: ESNRLSQQDFFMQYH*LGDLGSCEERAVSR Trigger: CCTGCTTACTGCCCTTTCCTCGCAGCTCCCCAAGTCTCCAAGTCAGTGGTACTGCATGAAGAAATCCTGCTGTGAAAGCCTATTGGATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| 3UTR CCA 90 bp | AAATATCCACCCACCCACCCTGGGCAAAGGCATGGCGTCTCAAAGTaGAAAATTCCACATTTGACCTTTGTGATGAGCCTCAGTCAAATC | + |
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Preference number: 1 (lower is better) Translates to: KYPPTHPGQRHGVSK*KIPHLTFVMSLSQI Trigger: GATTTGACTGAGGCTCATCACAAAGGTCAAATGTGGAATTTTCCACTTTGAGACGCCATGCCTTTGCCCAGGGTGGGTGGGTGGATATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| 3UTR GCA 90 bp | GGCCTGAATACTGAATGGAATGGGAGGGAATTGGAGGACTATAACTaGTGTTGTTACCAAGGGATCAACAAGGACCTAAGTCAGAGTCTG | + |
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Preference number: 1 (lower is better) Translates to: GLNTEWNGRELEDYN*CCYQGINKDLSQSL Trigger: CAGACTCTGACTTAGGTCCTTGTTGATCCCTTGGTAACAACAGCAGTTATAGTCCTCCAATTCCCTCCCATTCCATTCAGTATTCAGGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| 3UTR CCA 90 bp | ATGAGACACCTACAACAGTTTCGGCTTTCAGGCCTGAATACTGAATaGAATGGGAGGGAATTGGAGGACTATAACTGCTGTTGTTACCAA | + |
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Preference number: 1 (lower is better) Translates to: MRHLQQFRLSGLNTE*NGRELEDYNCCCYQ Trigger: TTGGTAACAACAGCAGTTATAGTCCTCCAATTCCCTCCCATTCCATTCAGTATTCAGGCCTGAAAGCCGAAACTGTTGTAGGTGTCTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| 3UTR-3UTR TCA 90 bp | GCAGGTCCTTCCCCCAGAGGCCACAAGCAGAAGCAAAGTGCAACCCCGTCCCTCCGGCTTGGGGTACCCTaGGCCACACAAGTGCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: AGPSPRGHKQKQSATPSLRLGVP*ATQVPG Trigger: TCCTGGCACTTGTGTGGCTCAGGGTACCCCAAGCCG...GAGGGACGGGGTTGCACTTTGCTTCTGCTTGTGGCCTCTGGGGGAAGGACCTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| 3UTR-3UTR GCA 90 bp | CATGCAGCAGGGGCAGGCCTTGCCCATCACCCCCAGGCTCCACCTCTCGCTCAACCTGAGCCACACAAGTaGCAGGATAGCAGGCGGCTT | + |
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Preference number: 2 (lower is better) Translates to: HAAGAGLAHHPQAPPLAQPEPHK*QDSRRL Trigger: AAGCCGCCTGCTATCCTGGCACTTGTGTGGCTCAGG...TTGAGCGAGAGGTGGAGCCTGGGGGTGATGGGCAAGGCCTGCCCCTGCTGCATG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| 3UTR-3UTR CCA 90 bp | TTCCTGGTCCTCATGGCTCGTCACACCCACTTCACTTGCCAGCAGGGAGTGGAGAGCAGGCGGCTTGAGTaGCAGGGGCAAGGCCTTGCC | + |
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Preference number: 2 (lower is better) Translates to: FLVLMARHTHFTCQQGVESRRLE*QGQGLA Trigger: GGCAAGGCCTTGCCCCTGCCACTCAAGCCGCCTGCT...CTCCACTCCCTGCTGGCAAGTGAAGTGGGTGTGACGAGCCATGAGGACCAGGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| 3UTR-3UTR GCA 90 bp | CCCAGAGGCCACAAGCAGAAGCAAAGTGCAACCCCGTCCCTCTCCCCATCCTGGCACACCCACTTCACTTaGCAGCAGGGAGTGGAGGAC | + |
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Preference number: 2 (lower is better) Translates to: PRGHKQKQSATPSLSPSWHTHFT*QQGVED Trigger: GTCCTCCACTCCCTGCTGGCAAGTGAAGTGGGTGTG...CCAGGATGGGGAGAGGGACGGGGTTGCACTTTGCTTCTGCTTGTGGCCTCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| 3UTR-3UTR GCA 90 bp | GGTCCTCATGGCTCGTCACACCCACTTCACTTGCCAGCAGGGAGTGGAGGACTCGCACAGCTCAGCCCTTaGCTGCTAGCTTCCCTCAGA | + |
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Preference number: 2 (lower is better) Translates to: GPHGSSHPLHLPAGSGGLAQLSP*LLASLR Trigger: TCTGAGGGAAGCTAGCAGGCAAGGGCTGAGCTGTGC...GAGTCCTCCACTCCCTGCTGGCAAGTGAAGTGGGTGTGACGAGCCATGAGGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| 3UTR-3UTR GCA 90 bp | CTTGGGGAGCTGCGAGGAAAGGGCAGTAAGCAGGATCCTGGCACGGCAACCTGTCAAGCAGAAGCAAAGTaGAACCCCGTCCCTCTCCCC | + |
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Preference number: 2 (lower is better) Translates to: LGELRGKGSKQDPGTATCQAEAK*NPVPLP Trigger: GGGGAGAGGGACGGGGTTGCACTTTGCTTCTGCTTG...ACAGGTTGCCGTGCCAGGATCCTGCTTACTGCCCTTTCCTCGCAGCTCCCCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| 3UTR-3UTR GCA 90 bp | CTTGGGGAGCTGCGAGGAAAGGGCAGTAAGCAGGATCCTGGCACGGCAACCTGTACAGTGTGGAGAGACTaGACTGCAGGTCCTTCCCCC | + |
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Preference number: 2 (lower is better) Translates to: LGELRGKGSKQDPGTATCTVWRD*TAGPSP Trigger: GGGGGAAGGACCTGCAGTGCAGTCTCTCCACACTGT...ACAGGTTGCCGTGCCAGGATCCTGCTTACTGCCCTTTCCTCGCAGCTCCCCAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| 3UTR-3UTR CCA 90 bp | GAACCCACAGTGTGGAGAGACTGCACTGCAGGTCCTTCCCCCAGAGGCCACAAGTGCTTGCATAGGTCCTaGTGTGGCTTAGATGCGGCT | + |
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Preference number: 2 (lower is better) Translates to: EPTVWRDCTAGPSPRGHKCLHRS*CGLDAA Trigger: AGCCGCATCTAAGCCACACCAGGACCTATGCAAGCA...CTTGTGGCCTCTGGGGGAAGGACCTGCAGTGCAGTCTCTCCACACTGTGGGTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| 3UTR-3UTR CCA 90 bp | CAAGTGAGGGGTCACTTTCTCCTTCTCAGGCCTCAGCCTGAGATCTCAGTGGTACTTGCCAGCAGGGAGTaGAGGACTCGGACTCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: QVRGHFLLLRPQPEISVVLASRE*RTRTLG Trigger: CCCCAGAGTCCGAGTCCTCCACTCCCTGCTGGCAAG...TACCACTGAGATCTCAGGCTGAGGCCTGAGAAGGAGAAAGTGACCCCTCACTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| 3UTR CAA 90 bp | GGCTATCATCTTGACATAATTAGGTCAAAGGGCACAGCTCAGCCCTaGCCTGCTAGCTTCCCTCAGACGGCTTGGGGTACCCTGAGCCAC | + |
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Preference number: 2 (lower is better) Translates to: GYHLDIIRSKGTAQP*PASFPQTAWGTLSH Trigger: GTGGCTCAGGGTACCCCAAGCCGTCTGAGGGAAGCTAGCAGGCAAGGGCTGAGCTGTGCCCTTTGACCTAATTATGTCAAGATGATAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| 3UTR-3UTR GCA 90 bp | CAAGTGAGGGGTCACTTTCTCCTTCTCAGGCCTCAGCCTGAGATCTCAGTGGTAGGAGACTTGGGGAGCTaGGAGGAAAGGGCAGTAAGC | + |
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Preference number: 2 (lower is better) Translates to: QVRGHFLLLRPQPEISVVGDLGS*EERAVS Trigger: GCTTACTGCCCTTTCCTCGCAGCTCCCCAAGTCTCC...TACCACTGAGATCTCAGGCTGAGGCCTGAGAAGGAGAAAGTGACCCCTCACTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| 3UTR-3UTR CCA 90 bp | TTCGGGATGTTGGCCATTCTTCCTCTGAGCCACAGAGCCAGGAGAGGCGGCTTTTCCCTCTCCCCATCCTaGCCATCTCTGGATAATGAG | + |
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Preference number: 2 (lower is better) Translates to: FGMLAILPLSHRARRGGFSLSPS*PSLDNE Trigger: CTCATTATCCAGAGATGGCCAGGATGGGGAGAGGGA...AAAGCCGCCTCTCCTGGCTCTGTGGCTCAGAGGAAGAATGGCCAACATCCCGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| 3UTR-3UTR CCA 90 bp | AGAGCCAGGAGAGGCGGCTTTGGAGGAAAGCCCTTTCTGGTACCATTGTTTGCTCAGGGCAGGGAACAGTaGGAACTGGACTCTGTTGGC | + |
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Preference number: 2 (lower is better) Translates to: RARRGGFGGKPFLVPLFAQGREQ*ELDSVG Trigger: GCCAACAGAGTCCAGTTCCCACTGTTCCCTGCCCTG...AGCAAACAATGGTACCAGAAAGGGCTTTCCTCCAAAGCCGCCTCTCCTGGCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| 3UTR CAA 90 bp | AGAGCCAGGAGAGGCGGCTTTGGAGGAAAGCCCTTTCTGGTACCATaGTTTGCTGCTAGGGTTGCTATGGTGATGCTTCCTGACTGGTGC | + |
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Preference number: 2 (lower is better) Translates to: RARRGGFGGKPFLVP*FAARVAMVMLPDWC Trigger: GCACCAGTCAGGAAGCATCACCATAGCAACCCTAGCAGCAAACAATGGTACCAGAAAGGGCTTTCCTCCAAAGCCGCCTCTCCTGGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| 3UTR CAA 90 bp | ACTTGGCTCAGGCTTGACTTTTGGAGGGATGTTTTCTTCGGGATGTaGGCCATTCTTCCTCTGAGCCACAGAGCCAGGAGAGGCGGCTTT | + |
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Preference number: 2 (lower is better) Translates to: TWLRLDFWRDVFFGM*AILPLSHRARRGGF Trigger: AAAGCCGCCTCTCCTGGCTCTGTGGCTCAGAGGAAGAATGGCCAACATCCCGAAGAAAACATCCCTCCAAAAGTCAAGCCTGAGCCAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| 3UTR-3UTR GCA 90 bp | TTCGGGATGTTGGCCATTCTTCCTCTGAGCCACAGAGCCAGGAGAGGCGGCTTTCTGGTGTGGCTTAGATaGGGCTATCATCTTGACATA | + |
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Preference number: 2 (lower is better) Translates to: FGMLAILPLSHRARRGGFLVWLR*GYHLDI Trigger: TATGTCAAGATGATAGCCGCATCTAAGCCACACCAG...AAAGCCGCCTCTCCTGGCTCTGTGGCTCAGAGGAAGAATGGCCAACATCCCGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| 3UTR-3UTR GCA 90 bp | CATGGCGTCTCAAAGTGGAAAATTCCACATTTGACCTTTGTGATGAGCCTCAGTTCTGTGGAAGGCCCATaGAGCAGGGGCAGGCCTTGC | + |
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Preference number: 2 (lower is better) Translates to: HGVSKWKIPHLTFVMSLSSVEGP*SRGRPC Trigger: GCAAGGCCTGCCCCTGCTGCATGGGCCTTCCACAGA...ACTGAGGCTCATCACAAAGGTCAAATGTGGAATTTTCCACTTTGAGACGCCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| 3UTR-3UTR CCA 90 bp | TCCAACTTAGGGTACCACAGGATGAAAGCAGAAACTGGCTTATGTACCAGAGACGCTGGCTCCTGGGCTTaGAGCTGGGATAGAGGTGGT | + |
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Preference number: 2 (lower is better) Translates to: SNLGYHRMKAETGLCTRDAGSWA*SWDRGG Trigger: ACCACCTCTATCCCAGCTCCAAGCCCAGGAGCCAGC...GTCTCTGGTACATAAGCCAGTTTCTGCTTTCATCCTGTGGTACCCTAAGTTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| 3UTR-3UTR CCA 90 bp | CTCCCTGGCATGATTGGGAACACTATCAGAGAAACACCTAATAGGACTCCTGTGGCAGAACCCACAGTGTaGAGAGACTGCACTGCAGGT | + |
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Preference number: 2 (lower is better) Translates to: LPGMIGNTIRETPNRTPVAEPTV*RDCTAG Trigger: ACCTGCAGTGCAGTCTCTCCACACTGTGGGTTCTGC...CACAGGAGTCCTATTAGGTGTTTCTCTGATAGTGTTCCCAATCATGCCAGGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| 3UTR-3UTR GCA 90 bp | CCAGGAGAGGCGGCTTTGGAGGAAAGCCCTTTCTGGTACCATTGTTTGCTGCTAAGCAGGATTTCTTCATaGAGTACCACTGACTTGGAG | + |
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Preference number: 2 (lower is better) Translates to: PGEAALEESPFWYHCLLLSRISS*STTDLE Trigger: CTCCAAGTCAGTGGTACTGCATGAAGAAATCCTGCT...TAGCAGCAAACAATGGTACCAGAAAGGGCTTTCCTCCAAAGCCGCCTCTCCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| 3UTR-3UTR CCA 90 bp | TCCAACTTAGGGTACCACAGGATGAAAGCAGAAACTGGCTTATGTACCAGAGACCAGGAGAGGCGGCTTTaGAGGAAAGCCCTTTCTGGT | + |
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Preference number: 2 (lower is better) Translates to: SNLGYHRMKAETGLCTRDQERRL*RKALSG Trigger: ACCAGAAAGGGCTTTCCTCCAAAGCCGCCTCTCCTG...GTCTCTGGTACATAAGCCAGTTTCTGCTTTCATCCTGTGGTACCCTAAGTTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| 3UTR-3UTR CCA 90 bp | ATACTGAATGGAATGGGAGGGAATTGGAGGACTATAACTGCTGTTGTTACCAAGGAACAAGGTCTGGGGTaGCAAGGAAGAGGTGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: ILNGMGGNWRTITAVVTKEQGLG*QGRGGQ Trigger: CTGCCCACCTCTTCCTTGCCACCCCAGACCTTGTTC...CTTGGTAACAACAGCAGTTATAGTCCTCCAATTCCCTCCCATTCCATTCAGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| 3UTR CAA 90 bp | CAGTTTCGGCTTTCAGGCCTGAATACTGAATGGAATGGGAGGGAATaGGAGGACTATAACTGCTGTTGTTACCAAGGGATCAACAAGGAC | + |
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Preference number: 2 (lower is better) Translates to: QFRLSGLNTEWNGRE*EDYNCCCYQGINKD Trigger: GTCCTTGTTGATCCCTTGGTAACAACAGCAGTTATAGTCCTCCAATTCCCTCCCATTCCATTCAGTATTCAGGCCTGAAAGCCGAAACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| 3UTR-3UTR TCA 90 bp | TCCAACTTAGGGTACCACAGGATGAAAGCAGAAACTGGCTTATGTACCAGAGACCTAATAGGACTCCTGTaGGTACCCATGCTTTTGCTT | + |
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Preference number: 2 (lower is better) Translates to: SNLGYHRMKAETGLCTRDLIGLL*VPMLLL Trigger: AAGCAAAAGCATGGGTACTCACAGGAGTCCTATTAG...GTCTCTGGTACATAAGCCAGTTTCTGCTTTCATCCTGTGGTACCCTAAGTTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| 3UTR-3UTR CCA 90 bp | TCCAACTTAGGGTACCACAGGATGAAAGCAGAAACTGGCTTATGTACCAGAGACACTCCCTGGCATGATTaGGAACACTATCAGAGAAAC | + |
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Preference number: 2 (lower is better) Translates to: SNLGYHRMKAETGLCTRDTPWHD*EHYQRN Trigger: GTTTCTCTGATAGTGTTCCCAATCATGCCAGGGAGT...GTCTCTGGTACATAAGCCAGTTTCTGCTTTCATCCTGTGGTACCCTAAGTTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| 3UTR-3UTR CCA 90 bp | ATTAAATCACCTCCAGGCTGTGTACGAGGTACATATGAAACAAAGGAATTTTATAGCGAGAGCCTTGCCTaGGAAGGCTCAGGAGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: IKSPPGCVRGTYETKEFYSESLA*EGSGAG Trigger: TCCTGCTCCTGAGCCTTCCCAGGCAAGGCTCTCGCT...ATAAAATTCCTTTGTTTCATATGTACCTCGTACACAGCCTGGAGGTGATTTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| 3UTR-3UTR TCA 90 bp | ATTAAATCACCTCCAGGCTGTGTACGAGGTACATATGAAACAAAGGAATTTTATTGGCCATTCTTCCTCTaGGCCACAGAGCCAGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: IKSPPGCVRGTYETKEFYWPFFL*ATEPGE Trigger: CTCTCCTGGCTCTGTGGCTCAGAGGAAGAATGGCCA...ATAAAATTCCTTTGTTTCATATGTACCTCGTACACAGCCTGGAGGTGATTTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| 3UTR GCA 72 bp | CCCTCAGACGGCTTGGGGTACCCTGAGCCACACAAGTaGCAGGATAGCAGGCGGCTTGAGTGGCAGGGGCAA | + |
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Preference number: 3 (lower is better) Translates to: PSDGLGYPEPHK*QDSRRLEWQGQ Trigger: TTGCCCCTGCCACTCAAGCCGCCTGCTATCCTGGCACTTGTGTGGCTCAGGGTACCCCAAGCCGTCTGAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| 3UTR-3UTR CAA 90 bp | TTCCTGGTCCTCATGGCTCGTCACACCCACTTCACTTGCCAGCAGGGAGTGGAGAGGATAGCAGGCGGCTaGAGTGGCAGGGGCAAGGCC | + |
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Preference number: 3 (lower is better) Translates to: FLVLMARHTHFTCQQGVERIAGG*SGRGKA Trigger: GGCCTTGCCCCTGCCACTCAAGCCGCCTGCTATCCT...CTCCACTCCCTGCTGGCAAGTGAAGTGGGTGTGACGAGCCATGAGGACCAGGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| 3UTR GCA 72 bp | GCTAGGGTTGCTATGGTGATGCTTCCTGACTGGTGCTaGTGGGAGGAGGCCCTTGCCTGTCCTGGGAGGCTC | + |
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Preference number: 3 (lower is better) Translates to: ARVAMVMLPDWC*WEEALACPGRL Trigger: GAGCCTCCCAGGACAGGCAAGGGCCTCCTCCCAGCAGCACCAGTCAGGAAGCATCACCATAGCAACCCTAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| 3UTR GCA 72 bp | TTCCTGGTCCTCATGGCTCGTCACACCCACTTCACTTaGCAGCAGGGAGTGGAGGACTCGGACTCTGGGGGA | + |
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Preference number: 3 (lower is better) Translates to: FLVLMARHTHFT*QQGVEDSDSGG Trigger: TCCCCCAGAGTCCGAGTCCTCCACTCCCTGCTGGCAAGTGAAGTGGGTGTGACGAGCCATGAGGACCAGGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| 3UTR GCA 72 bp | ACAAACTTGGTAACAGGAGCTGCTGAGCGAGAGCCTTaGCTGGGAAGGCTCAGGAGCAGGAAGGGGGCTGGC | + |
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Preference number: 3 (lower is better) Translates to: TNLVTGAAEREP*LGRLRSRKGAG Trigger: GCCAGCCCCCTTCCTGCTCCTGAGCCTTCCCAGGCAAGGCTCTCGCTCAGCAGCTCCTGTTACCAAGTTTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| 3UTR-3UTR CAA 90 bp | CTGGGAGGCTCCTCAGTCCCTGATGCTTTTCGCTGTCAGTTCTGGTTACAAACTGGCACAGCTCAGCCCTaGCCTGCTAGCTTCCCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: LGGSSVPDAFRCQFWLQTGTAQP*PASFPQ Trigger: CTGAGGGAAGCTAGCAGGCAAGGGCTGAGCTGTGCC...AGTTTGTAACCAGAACTGACAGCGAAAAGCATCAGGGACTGAGGAGCCTCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| 3UTR CCA 72 bp | GGGATCAACAAGGACCTAAGTCAGAGTCTGGTCCCATaGAACAAGGTCTGGGGTGGCAAGGAAGAGGTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: GINKDLSQSLVP*NKVWGGKEEVG Trigger: GCCCACCTCTTCCTTGCCACCCCAGACCTTGTTCCATGGGACCAGACTCTGACTTAGGTCCTTGTTGATCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| 3UTR-3UTR CAA 90 bp | CTGAATACTGAATGGAATGGGAGGGAATTGGAGGACTATAACTGCTGTTGTTACCAGCAGGGGCAGGCCTaGCCCATCACCCCCAGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: LNTEWNGRELEDYNCCCYQQGQA*PITPRL Trigger: GAGCCTGGGGGTGATGGGCAAGGCCTGCCCCTGCTG...GTAACAACAGCAGTTATAGTCCTCCAATTCCCTCCCATTCCATTCAGTATTCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| 3UTR TCA 72 bp | ACCATTTATAAGGGTTACCCTGCCAGGAGCACCGAGTaGCTAATGGGCACTTCCTGGTCCTCATGGCTCGTC | + |
|
Preference number: 3 (lower is better) Translates to: TIYKGYPARSTE*LMGTSWSSWLV Trigger: GACGAGCCATGAGGACCAGGAAGTGCCCATTAGTCACTCGGTGCTCCTGGCAGGGTAACCCTTATAAATGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| 3UTR TCA 72 bp | AGGCTTTCACAGCAGGATTTCTTCATGCAGTACCACTaGCTTGGAGACTTGGGGAGCTGCGAGGAAAGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: RLSQQDFFMQYH*LGDLGSCEERA Trigger: TGCCCTTTCCTCGCAGCTCCCCAAGTCTCCAAGTCAGTGGTACTGCATGAAGAAATCCTGCTGTGAAAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| 3UTR TCA 72 bp | GACTCTGTTGGCAGGATCTCATGTAGCATAGAGGGCTaGTCCTCCAGCCTCTACCTCTCAAAGGCTGAGATT | + |
|
Preference number: 3 (lower is better) Translates to: DSVGRISCSIEG*SSSLYLSKAEI Trigger: AATCTCAGCCTTTGAGAGGTAGAGGCTGGAGGATCAGCCCTCTATGCTACATGAGATCCTGCCAACAGAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| 3UTR GCA 72 bp | CCGAATCCAATAGGCTTTCACAGCAGGATTTCTTCATaGAGTACCACTGACTTGGAGACTTGGGGAGCTGCG | + |
|
Preference number: 3 (lower is better) Translates to: PNPIGFHSRISS*STTDLETWGAA Trigger: CGCAGCTCCCCAAGTCTCCAAGTCAGTGGTACTGCATGAAGAAATCCTGCTGTGAAAGCCTATTGGATTCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| 3UTR GCA 72 bp | CCCCAGGCTCCACCTCTCGCTCAATTCCAAGACCAGTaGCACGGGCTTTATTTAGTAGGTAGTTACAGTAGT | + |
|
Preference number: 3 (lower is better) Translates to: PQAPPLAQFQDQ*HGLYLVGSYSS Trigger: ACTACTGTAACTACCTACTAAATAAAGCCCGTGGCACTGGTCTTGGAATTGAGCGAGAGGTGGAGCCTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| 3UTR CCA 72 bp | TTCACAGCAGGATTTCTTCATGCAGTACCACTGACTTaGAGACTTGGGGAGCTGCGAGGAAAGGGCAGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: FTAGFLHAVPLT*RLGELRGKGSK Trigger: CTTACTGCCCTTTCCTCGCAGCTCCCCAAGTCTCCAAGTCAGTGGTACTGCATGAAGAAATCCTGCTGTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| 3UTR-3UTR CAA 90 bp | GAGGCTCCTCAGTCCCTGATGCTTTTCGCTGTCAGTTCTGGTTACAAACTTGGTTGGAATGGGAGGGAATaGGAGGACTATAACTGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: EAPQSLMLFAVSSGYKLGWNGRE*EDYNCC Trigger: ACAGCAGTTATAGTCCTCCAATTCCCTCCCATTCCA...ACCAAGTTTGTAACCAGAACTGACAGCGAAAAGCATCAGGGACTGAGGAGCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| 3UTR TCA 72 bp | CCTCAGCCTGAGATCTCAGTGGTAGACTCCCTGGCATaGTTGGGAACACTATCAGAGAAACACCTAATAGGA | + |
|
Preference number: 3 (lower is better) Translates to: PQPEISVVDSLA*LGTLSEKHLIG Trigger: TCCTATTAGGTGTTTCTCTGATAGTGTTCCCAATCATGCCAGGGAGTCTACCACTGAGATCTCAGGCTGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| 3UTR CCA 72 bp | CTCCAACTTAGGGTACCACAGGATGAAAGCAGAAACTaGCTTATGTACCAGAGACTACTGCTCAGGACAACC | + |
|
Preference number: 3 (lower is better) Translates to: LQLRVPQDESRN*LMYQRLLLRTT Trigger: GGTTGTCCTGAGCAGTAGTCTCTGGTACATAAGCCAGTTTCTGCTTTCATCCTGTGGTACCCTAAGTTGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| 3UTR GCA 72 bp | ACTGAATGGAATGGGAGGGAATTGGAGGACTATAACTaGTGTTGTTACCAAGGGATCAACAAGGACCTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: TEWNGRELEDYN*CCYQGINKDLS Trigger: ACTTAGGTCCTTGTTGATCCCTTGGTAACAACAGCAGTTATAGTCCTCCAATTCCCTCCCATTCCATTCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS-3UTR GCA 90 bp | CATGCAGCAGGGGCAGGCCTTGCCCATCACCCCCAGGCTCCACCTCTCGCTCAAGGTTGGGCCCGCTGCTaGCGCTCTCCTTCCCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: HAAGAGLAHHPQAPPLAQGWARC*RSPSLW Trigger: CCAAAGGGAAGGAGAGCGGCAGCAGCGGGCCCAACC...TTGAGCGAGAGGTGGAGCCTGGGGGTGATGGGCAAGGCCTGCCCCTGCTGCATG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS-3UTR TCA 90 bp | CATGCAGCAGGGGCAGGCCTTGCCCATCACCCCCAGGCTCCACCTCTCGCTCAAGCAGCCTCCGTCTTTTaGGAATCAGTGGCCGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: HAAGAGLAHHPQAPPLAQAASVF*ESVAGG Trigger: CCCGCCGGCCACTGATTCTCAAAAGACGGAGGCTGC...TTGAGCGAGAGGTGGAGCCTGGGGGTGATGGGCAAGGCCTGCCCCTGCTGCATG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS-3UTR GCA 90 bp | CATGCAGCAGGGGCAGGCCTTGCCCATCACCCCCAGGCTCCACCTCTCGCTCAAGAAAGGCTGGGAATCTaGAGCTCGGGGGAGCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: HAAGAGLAHHPQAPPLAQERLGI*SSGEPG Trigger: GCCTGGCTCCCCCGAGCTGCAGATTCCCAGCCTTTC...TTGAGCGAGAGGTGGAGCCTGGGGGTGATGGGCAAGGCCTGCCCCTGCTGCATG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS-3UTR CCA 90 bp | TGCAGGTCCTTCCCCCAGAGGCCACAAGCAGAAGCAAAGTGCAACCCCGTCCCTTTGGGAGGCCTGTGCTaGAGCAGGCTCCGGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CRSFPQRPQAEAKCNPVPLGGLC*SRLRLG Trigger: GCCCAGCCGGAGCCTGCTCCAGCACAGGCCTCCCAA...AGGGACGGGGTTGCACTTTGCTTCTGCTTGTGGCCTCTGGGGGAAGGACCTGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| 3UTR CAA 72 bp | AGCATCTGTGGAAGGCCCATGCAGCAGGGGCAGGCCTaGCCCATCACCCCCAGGCTCCACCTCTCGCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SICGRPMQQGQA*PITPRLHLSLN Trigger: ATTGAGCGAGAGGTGGAGCCTGGGGGTGATGGGCAAGGCCTGCCCCTGCTGCATGGGCCTTCCACAGATGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS-3UTR TCA 90 bp | TCGTCACACCCACTTCACTTGCCAGCAGGGAGTGGAGGACTCGGACTCTGGGGGCAAAGGGCTCTGAGTTaGGGAGCTCCCGGGGCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSHPLHLPAGSGGLGLWGQRALS*GAPGAS Trigger: ACTCGCCCCGGGAGCTCCTCAACTCAGAGCCCTTTG...CCCCCAGAGTCCGAGTCCTCCACTCCCTGCTGGCAAGTGAAGTGGGTGTGACGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS-3UTR GCA 90 bp | GAACCCACAGTGTGGAGAGACTGCACTGCAGGTCCTTCCCCCAGAGGCCACAAGGTGGTGGTGGAGGGCTaGCGAAGGGGTCAGAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: EPTVWRDCTAGPSPRGHKVVVEG*RRGQRP Trigger: TGGCCTCTGACCCCTTCGGCAGCCCTCCACCACCAC...CTTGTGGCCTCTGGGGGAAGGACCTGCAGTGCAGTCTCTCCACACTGTGGGTTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS-3UTR CCA 90 bp | GTCCTCATGGCTCGTCACACCCACTTCACTTGCCAGCAGGGAGTGGAGGACTCGCGGGGGAGCCAGGCTTaGGGCCTTCCACATGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VLMARHTHFTCQQGVEDSRGSQA*GLPHVV Trigger: CACCACATGTGGAAGGCCCCAAGCCTGGCTCCCCCG...CGAGTCCTCCACTCCCTGCTGGCAAGTGAAGTGGGTGTGACGAGCCATGAGGAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS-3UTR CCA 90 bp | GTCCTCATGGCTCGTCACACCCACTTCACTTGCCAGCAGGGAGTGGAGGACTCGGGGGCCTTCCACATGTaGTGGTGGAGGGCTGCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: VLMARHTHFTCQQGVEDSGAFHM*WWRAAE Trigger: TTCGGCAGCCCTCCACCACCACATGTGGAAGGCCCC...CGAGTCCTCCACTCCCTGCTGGCAAGTGAAGTGGGTGTGACGAGCCATGAGGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| 3UTR CAA 72 bp | ACCCTGAGCCACACAAGTGCCAGGATAGCAGGCGGCTaGAGTGGCAGGGGCAAGGCCTTGCCTCTATCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TLSHTSARIAGG*SGRGKALPLSQ Trigger: CTGCGATAGAGGCAAGGCCTTGCCCCTGCCACTCAAGCCGCCTGCTATCCTGGCACTTGTGTGGCTCAGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| 3UTR CAA 72 bp | CTTCCTGGTCCTCATGGCTCGTCACACCCACTTCACTaGCCAGCAGGGAGTGGAGGACTCGGACTCTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LPGPHGSSHPLH*PAGSGGLGLWG Trigger: CCCCCAGAGTCCGAGTCCTCCACTCCCTGCTGGCAAGTGAAGTGGGTGTGACGAGCCATGAGGACCAGGAAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS-3UTR TCA 90 bp | CTTGCCCATCACCCCCAGGCTCCACCTCTCGCTCAATTCCAAGACCAGTGCCACCTTTGGCTGGAGGTGTaGGCCTCCAGGACTCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LAHHPQAPPLAQFQDQCHLWLEV*ASRTQG Trigger: ACCCTGAGTCCTGGAGGCTCACACCTCCAGCCAAAG...GTGGCACTGGTCTTGGAATTGAGCGAGAGGTGGAGCCTGGGGGTGATGGGCAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS-3UTR GCA 90 bp | CATGCAGCAGGGGCAGGCCTTGCCCATCACCCCCAGGCTCCACCTCTCGCTCAATTCCGGCTGGAAATTTaGAAGAGCTGGACTCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HAAGAGLAHHPQAPPLAQFRLEI*KSWTLP Trigger: TGGCAGAGTCCAGCTCTTGCAAATTTCCAGCCGGAA...TTGAGCGAGAGGTGGAGCCTGGGGGTGATGGGCAAGGCCTGCCCCTGCTGCATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS-3UTR CCA 90 bp | TCGTCACACCCACTTCACTTGCCAGCAGGGAGTGGAGGACTCGGACTCTGGGGGGGATATCAGCGTTGCTaGGGATGGCCACCACTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SSHPLHLPAGSGGLGLWGGYQRC*GWPPLV Trigger: CACAAGTGGTGGCCATCCCCAGCAACGCTGATATCC...CCCCCAGAGTCCGAGTCCTCCACTCCCTGCTGGCAAGTGAAGTGGGTGTGACGA 60% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS-3UTR CCA 90 bp | TCAGACGGCTTGGGGTACCCTGAGCCACACAAGTGCCAGGATAGCAGGCGGCTTCTCCTGTCTTTGCCTTaGAGGGGCTCCAGGAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SDGLGYPEPHKCQDSRRLLLSLP*RGSRRL Trigger: AAGCCTCCTGGAGCCCCTCCAAGGCAAAGACAGGAG...AAGCCGCCTGCTATCCTGGCACTTGTGTGGCTCAGGGTACCCCAAGCCGTCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS-3UTR TCA 90 bp | GGTCCTCATGGCTCGTCACACCCACTTCACTTGCCAGCAGGGAGTGGAGGACTCCGATTGGCACTTGGGTaGATGGTCCAGAAGGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: GPHGSSHPLHLPAGSGGLRLALG*MVQKET Trigger: GGTCTCCTTCTGGACCATTCACCCAAGTGCCAATCG...GAGTCCTCCACTCCCTGCTGGCAAGTGAAGTGGGTGTGACGAGCCATGAGGACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS-3UTR TCA 90 bp | TTCCTGGTCCTCATGGCTCGTCACACCCACTTCACTTGCCAGCAGGGAGTGGAGGGGTCGTTTCTGCTGTaGTTCCAAGTGCTCGGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: FLVLMARHTHFTCQQGVEGSFLL*FQVLGR Trigger: TCGCCCGAGCACTTGGAATCACAGCAGAAACGACCC...CTCCACTCCCTGCTGGCAAGTGAAGTGGGTGTGACGAGCCATGAGGACCAGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS-3UTR TCA 90 bp | GAACCCACAGTGTGGAGAGACTGCACTGCAGGTCCTTCCCCCAGAGGCCACAAGTGTGCTGGAGTCCTCTaGGAAGAACAGGTCAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: EPTVWRDCTAGPSPRGHKCAGVL*EEQVRL Trigger: GAGCCTGACCTGTTCTTCTCAGAGGACTCCAGCACA...CTTGTGGCCTCTGGGGGAAGGACCTGCAGTGCAGTCTCTCCACACTGTGGGTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS-3UTR GCA 90 bp | TCGTCACACCCACTTCACTTGCCAGCAGGGAGTGGAGGACTCGGACTCTGGGGGTGCTGTGATTCCAAGTaGTCGGGCGATTGTGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SSHPLHLPAGSGGLGLWGCCDSK*SGDCGD Trigger: GTCTCCACAATCGCCCGAGCACTTGGAATCACAGCA...CCCCCAGAGTCCGAGTCCTCCACTCCCTGCTGGCAAGTGAAGTGGGTGTGACGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS-3UTR CCA 90 bp | CCCAGAGGCCACAAGCAGAAGCAAAGTGCAACCCCGTCCCTCTCCCCATCCTGGGCTGTGATGATGCTCTaGATATCAGCGTTGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PRGHKQKQSATPSLSPSWAVMML*ISALLG Trigger: CCCCAGCAACGCTGATATCCAGAGCATCATCACAGC...CCAGGATGGGGAGAGGGACGGGGTTGCACTTTGCTTCTGCTTGTGGCCTCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS-3UTR CCA 90 bp | CCCAGAGGCCACAAGCAGAAGCAAAGTGCAACCCCGTCCCTCTCCCCATCCTGGTGGTTCACTGGGAACTaGATGGGCACCAGGTATGAG | + |
|
Preference number: 4 (lower is better) Translates to: PRGHKQKQSATPSLSPSWWFTGN*MGTRYE Trigger: CTCATACCTGGTGCCCATCCAGTTCCCAGTGAACCA...CCAGGATGGGGAGAGGGACGGGGTTGCACTTTGCTTCTGCTTGTGGCCTCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS-3UTR CCA 90 bp | TTCCTGGTCCTCATGGCTCGTCACACCCACTTCACTTGCCAGCAGGGAGTGGAGCAGGGACTGGTTCACTaGGAACTGGATGGGCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: FLVLMARHTHFTCQQGVEQGLVH*ELDGHQ Trigger: CTGGTGCCCATCCAGTTCCCAGTGAACCAGTCCCTG...CTCCACTCCCTGCTGGCAAGTGAAGTGGGTGTGACGAGCCATGAGGACCAGGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS-3UTR CCA 90 bp | TCGTCACACCCACTTCACTTGCCAGCAGGGAGTGGAGGACTCGGACTCTGGGGGTGGATAGCAACACCTTaGGTGCAATGCGGACTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSHPLHLPAGSGGLGLWGWIATP*VQCGLA Trigger: AGCGAGTCCGCATTGCACCCAAGGTGTTGCTATCCA...CCCCCAGAGTCCGAGTCCTCCACTCCCTGCTGGCAAGTGAAGTGGGTGTGACGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS-3UTR TCA 90 bp | CCAGGAGAGGCGGCTTTGGAGGAAAGCCCTTTCTGGTACCATTGTTTGCTGCTACAGGTCAAAGGGCTCTaGGTTGAGGAGCTCCCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PGEAALEESPFWYHCLLLQVKGL*VEELPG Trigger: CCCCGGGAGCTCCTCAACTCAGAGCCCTTTGACCTG...TAGCAGCAAACAATGGTACCAGAAAGGGCTTTCCTCCAAAGCCGCCTCTCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS-3UTR GCA 90 bp | GGTCCTCATGGCTCGTCACACCCACTTCACTTGCCAGCAGGGAGTGGAGGACTCACACCTTGGGTGCAATaGGGACTCGCTTGCTATGAC | + |
|
Preference number: 4 (lower is better) Translates to: GPHGSSHPLHLPAGSGGLTPWVQ*GLACYD Trigger: GTCATAGCAAGCGAGTCCGCATTGCACCCAAGGTGT...GAGTCCTCCACTCCCTGCTGGCAAGTGAAGTGGGTGTGACGAGCCATGAGGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS-3UTR CCA 90 bp | TTCGGGATGTTGGCCATTCTTCCTCTGAGCCACAGAGCCAGGAGAGGCGGCTTTCAGCGTTGCTGGGGATaGCCACCACTTGTGTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: FGMLAILPLSHRARRGGFQRCWG*PPLVCW Trigger: CCAACACACAAGTGGTGGCCATCCCCAGCAACGCTG...AAAGCCGCCTCTCCTGGCTCTGTGGCTCAGAGGAAGAATGGCCAACATCCCGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS-3UTR CCA 90 bp | CCAGGAGAGGCGGCTTTGGAGGAAAGCCCTTTCTGGTACCATTGTTTGCTGCTAAGGCCAAAGGCACCCTaGGGGGTTCGTACTGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PGEAALEESPFWYHCLLLRPKAP*GVRTGL Trigger: CAGCCCAGTACGAACCCCCCAGGGTGCCTTTGGCCT...TAGCAGCAAACAATGGTACCAGAAAGGGCTTTCCTCCAAAGCCGCCTCTCCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| 3UTR CAA 72 bp | GACTACTGCTCAGGACAACCTGAAAGGCTGGCTGCGTaGTTGGGCCCCACTCTACCTTCAGGAAAGGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: DYCSGQPERLAA*LGPTLPSGKAP Trigger: GGGAGCCTTTCCTGAAGGTAGAGTGGGGCCCAACAACGCAGCCAGCCTTTCAGGTTGTCCTGAGCAGTAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS-3UTR GCA 90 bp | GCAGGTCCTTCCCCCAGAGGCCACAAGCAGAAGCAAAGTGCAACCCCGTCCCTCTGTCCTTCAAGGTCATaGGCTTTCTCTCAGTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: AGPSPRGHKQKQSATPSLCPSRS*AFSQCC Trigger: ACAGCACTGAGAGAAAGCGCATGACCTTGAAGGACA...GAGGGACGGGGTTGCACTTTGCTTCTGCTTGTGGCCTCTGGGGGAAGGACCTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS-3UTR GCA 90 bp | CTTGGGGAGCTGCGAGGAAAGGGCAGTAAGCAGGATCCTGGCACGGCAACCTGTGGATTGGGTCGTTTCTaGTGTGATTCCAAGTGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LGELRGKGSKQDPGTATCGLGRF*CDSKCS Trigger: CGAGCACTTGGAATCACAGCAGAAACGACCCAATCC...ACAGGTTGCCGTGCCAGGATCCTGCTTACTGCCCTTTCCTCGCAGCTCCCCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS-3UTR CCA 90 bp | TTCGGGATGTTGGCCATTCTTCCTCTGAGCCACAGAGCCAGGAGAGGCGGCTTTTCTTTTGAGAATCAGTaGCCGGCGGGGGCTGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FGMLAILPLSHRARRGGFSFENQ*PAGAGS Trigger: AGAACCAGCCCCCGCCGGCCACTGATTCTCAAAAGA...AAAGCCGCCTCTCCTGGCTCTGTGGCTCAGAGGAAGAATGGCCAACATCCCGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS-3UTR TCA 90 bp | TGCAGGTCCTTCCCCCAGAGGCCACAAGCAGAAGCAAAGTGCAACCCCGTCCCTCTTTGCTTCTTCCTCTaGTGTTTCACTCGGGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: CRSFPQRPQAEAKCNPVPLCFFL*CFTRGI Trigger: AATGCCCCGAGTGAAACATCAGAGGAAGAAGCAAAG...AGGGACGGGGTTGCACTTTGCTTCTGCTTGTGGCCTCTGGGGGAAGGACCTGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS-3UTR TCA 90 bp | GAGGCTCCTCAGTCCCTGATGCTTTTCGCTGTCAGTTCTGGTTACAAACTTGGTCGGACTCGCTTGCTATaGCGGGCGAGCTCTGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: EAPQSLMLFAVSSGYKLGRTRLL*RASSEL Trigger: GAGCTCAGAGCTCGCCCGTCATAGCAAGCGAGTCCG...ACCAAGTTTGTAACCAGAACTGACAGCGAAAAGCATCAGGGACTGAGGAGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS-3UTR TCA 90 bp | TTCTGTTCTGAGCTCCAACTTAGGGTACCACAGGATGAAAGCAGAAACTGGCTTCTTCCTGAGGGCAGCTaGGGTGGGGTGCAGGCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: FCSELQLRVPQDESRNWLLPEGS*GGVQAR Trigger: CCGAGCCTGCACCCCACCTCAGCTGCCCTCAGGAAG...AAGCCAGTTTCTGCTTTCATCCTGTGGTACCCTAAGTTGGAGCTCAGAACAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS-3UTR GCA 90 bp | TTCGGGATGTTGGCCATTCTTCCTCTGAGCCACAGAGCCAGGAGAGGCGGCTTTTCTGGATATCAGCGTTaGTGGGGATGGCCACCACTT | + |
|
Preference number: 4 (lower is better) Translates to: FGMLAILPLSHRARRGGFSGYQR*WGWPPL Trigger: AAGTGGTGGCCATCCCCAGCAACGCTGATATCCAGA...AAAGCCGCCTCTCCTGGCTCTGTGGCTCAGAGGAAGAATGGCCAACATCCCGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS-3UTR GCA 90 bp | TCAGACGGCTTGGGGTACCCTGAGCCACACAAGTGCCAGGATAGCAGGCGGCTTTCAGACACAGAGTCCTaGCAAGATGTTGACACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SDGLGYPEPHKCQDSRRLSDTES*QDVDTP Trigger: AGGAGTGTCAACATCTTGGCAGGACTCTGTGTCTGA...AAGCCGCCTGCTATCCTGGCACTTGTGTGGCTCAGGGTACCCCAAGCCGTCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS-3UTR CCA 90 bp | CTTGCCCATCACCCCCAGGCTCCACCTCTCGCTCAATTCCAAGACCAGTGCCACATGTCAAGTAGCGATTaGCACTTGGGTGAATGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LAHHPQAPPLAQFQDQCHMSSSD*HLGEWS Trigger: GGACCATTCACCCAAGTGCCAATCGCTACTTGACAT...GTGGCACTGGTCTTGGAATTGAGCGAGAGGTGGAGCCTGGGGGTGATGGGCAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS-3UTR CCA 90 bp | TTCGGGATGTTGGCCATTCTTCCTCTGAGCCACAGAGCCAGGAGAGGCGGCTTTTCGCCGTGCGCCCAGTaGGATTTCAGTTTTGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: FGMLAILPLSHRARRGGFSPCAQ*DFSFDG Trigger: ACCATCAAAACTGAAATCCCACTGGGCGCACGGCGA...AAAGCCGCCTCTCCTGGCTCTGTGGCTCAGAGGAAGAATGGCCAACATCCCGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| 3UTR CAA 72 bp | CTTGACATAATTAGGTCAAAGGGCACAGCTCAGCCCTaGCCTGCTAGCTTCCCTCAGACGGCTTGGGGTACC | + |
|
Preference number: 4 (lower is better) Translates to: LDIIRSKGTAQP*PASFPQTAWGT Trigger: GGTACCCCAAGCCGTCTGAGGGAAGCTAGCAGGCAAGGGCTGAGCTGTGCCCTTTGACCTAATTATGTCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS-3UTR TCA 90 bp | GAACCCACAGTGTGGAGAGACTGCACTGCAGGTCCTTCCCCCAGAGGCCACAAGTTCTCTCAGTGCTGTTaGTGGCAAACTGTATCATGG | + |
|
Preference number: 4 (lower is better) Translates to: EPTVWRDCTAGPSPRGHKFSQCC*WQTVSW Trigger: CCATGATACAGTTTGCCATCAACAGCACTGAGAGAA...CTTGTGGCCTCTGGGGGAAGGACCTGCAGTGCAGTCTCTCCACACTGTGGGTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS-3UTR TCA 90 bp | GAACCCACAGTGTGGAGAGACTGCACTGCAGGTCCTTCCCCCAGAGGCCACAAGTGGAGAGAAAGGTTGTaGCGAATAGAGTTCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: EPTVWRDCTAGPSPRGHKWRERL*RIEFFQ Trigger: CTGGAAGAACTCTATTCGTCACAACCTTTCTCTCCA...CTTGTGGCCTCTGGGGGAAGGACCTGCAGTGCAGTCTCTCCACACTGTGGGTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS-3UTR CCA 90 bp | CTTGCCCATCACCCCCAGGCTCCACCTCTCGCTCAATTCCAAGACCAGTGCCACAGAGTTCTTCCAGCCTaGCTTGGCAATGTGCTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: LAHHPQAPPLAQFQDQCHRVLPA*LGNVLK Trigger: TTTAAGCACATTGCCAAGCCAGGCTGGAAGAACTCT...GTGGCACTGGTCTTGGAATTGAGCGAGAGGTGGAGCCTGGGGGTGATGGGCAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS-3UTR GCA 90 bp | CTTGGGGAGCTGCGAGGAAAGGGCAGTAAGCAGGATCCTGGCACGGCAACCTGTATGTCCTCCTCAGGCTaGATTTCTTCTTCCTTAATG | + |
|
Preference number: 4 (lower is better) Translates to: LGELRGKGSKQDPGTATCMSSSG*ISSSLM Trigger: CATTAAGGAAGAAGAAATGCAGCCTGAGGAGGACAT...ACAGGTTGCCGTGCCAGGATCCTGCTTACTGCCCTTTCCTCGCAGCTCCCCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS-3UTR GCA 90 bp | CTGGGAGGCTCCTCAGTCCCTGATGCTTTTCGCTGTCAGTTCTGGTTACAAACTCGGCTGGCCGAAATGTaGTGGAGTCCTCTGAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LGGSSVPDAFRCQFWLQTRLAEM*WSPLRR Trigger: TCTTCTCAGAGGACTCCAGCACATTTCGGCCAGCCG...AGTTTGTAACCAGAACTGACAGCGAAAAGCATCAGGGACTGAGGAGCCTCCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS-3UTR TCA 90 bp | CTTGCCCATCACCCCCAGGCTCCACCTCTCGCTCAATTCCAAGACCAGTGCCACGTGGGATTTCAGTTTTaGTGGTCACATTTCTATGGA | + |
|
Preference number: 4 (lower is better) Translates to: LAHHPQAPPLAQFQDQCHVGFQF*WSHFYG Trigger: TCCATAGAAATGTGACCATCAAAACTGAAATCCCAC...GTGGCACTGGTCTTGGAATTGAGCGAGAGGTGGAGCCTGGGGGTGATGGGCAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS-3UTR TCA 90 bp | CTTGCCCATCACCCCCAGGCTCCACCTCTCGCTCAATTCCAAGACCAGTGCCACTCTTCCTTAATGGACTaGATAGGAAGTAAAGGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LAHHPQAPPLAQFQDQCHSSLMD*IGSKGN Trigger: GTTGCCTTTACTTCCTATTCAGTCCATTAAGGAAGA...GTGGCACTGGTCTTGGAATTGAGCGAGAGGTGGAGCCTGGGGGTGATGGGCAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS-3UTR TCA 90 bp | TTCCTGGTCCTCATGGCTCGTCACACCCACTTCACTTGCCAGCAGGGAGTGGAGCTAGAAGGATCTTGCTaGGGCTATCATTCATTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: FLVLMARHTHFTCQQGVELEGSC*GYHSLC Trigger: ACACAATGAATGATAGCCTCAGCAAGATCCTTCTAG...CTCCACTCCCTGCTGGCAAGTGAAGTGGGTGTGACGAGCCATGAGGACCAGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS-3UTR CCA 90 bp | AGAGCCAGGAGAGGCGGCTTTGGAGGAAAGCCCTTTCTGGTACCATTGTTTGCTGAAATTTGCAAGAGCTaGACTCTGCCACCTCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RARRGGFGGKPFLVPLFAEICKS*TLPPLG Trigger: CCCAAGAGGTGGCAGAGTCCAGCTCTTGCAAATTTC...AGCAAACAATGGTACCAGAAAGGGCTTTCCTCCAAAGCCGCCTCTCCTGGCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS-3UTR CCA 90 bp | CAAGGGATCAACAAGGACCTAAGTCAGAGTCTGGTCCCATGGAACAAGGTCTGGGGACTTCTTGGGCTTTaGGGTAGGAGAGCAGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QGINKDLSQSLVPWNKVWGLLGL*GRRAGR Trigger: TCTTCCTGCTCTCCTACCCCAAAGCCCAAGAAGTCC...CCAGACCTTGTTCCATGGGACCAGACTCTGACTTAGGTCCTTGTTGATCCCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS-3UTR CCA 90 bp | CTGGGAGGCTCCTCAGTCCCTGATGCTTTTCGCTGTCAGTTCTGGTTACAAACTCGATTGTGGAGACCCTaGTTCCAGTGGCTTAAACAC | + |
|
Preference number: 4 (lower is better) Translates to: LGGSSVPDAFRCQFWLQTRLWRP*FQWLKH Trigger: GTGTTTAAGCCACTGGAACCAGGGTCTCCACAATCG...AGTTTGTAACCAGAACTGACAGCGAAAAGCATCAGGGACTGAGGAGCCTCCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| 3UTR CAA 72 bp | AGAGGCGGCTTTGGAGGAAAGCCCTTTCTGGTACCATaGTTTGCTGCTAGGGTTGCTATGGTGATGCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RGGFGGKPFLVP*FAARVAMVMLP Trigger: AGGAAGCATCACCATAGCAACCCTAGCAGCAAACAATGGTACCAGAAAGGGCTTTCCTCCAAAGCCGCCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| 3UTR CAA 72 bp | GGAAAGGCTCCCTGGTACGAGATACTTGGCTCAGGCTaGACTTTTGGAGGGATGTTTTCTTCGGGATGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GKAPWYEILGSG*TFGGMFSSGCW Trigger: CCAACATCCCGAAGAAAACATCCCTCCAAAAGTCAAGCCTGAGCCAAGTATCTCGTACCAGGGAGCCTTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS-3UTR GCA 90 bp | CATGGCGTCTCAAAGTGGAAAATTCCACATTTGACCTTTGTGATGAGCCTCAGTCAATGCGGACTCGCTTaGTATGACGGGCGAGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HGVSKWKIPHLTFVMSLSQCGLA*YDGRAL Trigger: CAGAGCTCGCCCGTCATAGCAAGCGAGTCCGCATTG...ACTGAGGCTCATCACAAAGGTCAAATGTGGAATTTTCCACTTTGAGACGCCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS-3UTR CCA 90 bp | CTGAATACTGAATGGAATGGGAGGGAATTGGAGGACTATAACTGCTGTTGTTACTCACTCGGGGCATTCTaGACAGGAAGGGGCAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LNTEWNGRELEDYNCCCYSLGAF*TGRGSL Trigger: GAGGCTGCCCCTTCCTGTCCAGAATGCCCCGAGTGA...GTAACAACAGCAGTTATAGTCCTCCAATTCCCTCCCATTCCATTCAGTATTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS-3UTR CCA 90 bp | CAAGGGATCAACAAGGACCTAAGTCAGAGTCTGGTCCCATGGAACAAGGTCTGGCATATAAGAGTAGGGTaGCCTCTCAGACACAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: QGINKDLSQSLVPWNKVWHIRVG*PLRHRV Trigger: GACTCTGTGTCTGAGAGGCCACCCTACTCTTATATG...CCAGACCTTGTTCCATGGGACCAGACTCTGACTTAGGTCCTTGTTGATCCCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS-3UTR CCA 90 bp | CAAGTGAGGGGTCACTTTCTCCTTCTCAGGCCTCAGCCTGAGATCTCAGTGGTAATGGTCACATTTCTATaGAGCTCAGGATTGGGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: QVRGHFLLLRPQPEISVVMVTFL*SSGLGR Trigger: ACGACCCAATCCTGAGCTCCATAGAAATGTGACCAT...TACCACTGAGATCTCAGGCTGAGGCCTGAGAAGGAGAAAGTGACCCCTCACTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS-3UTR CCA 90 bp | TCCCCATCCTGGCCATCTCTGGATAATGAGCTAAGGAAATACGCTTACATTTATGGTTGGCTGAAAGGCTaGGAATCTGCAGCTCGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SPSWPSLDNELRKYAYIYGWLKG*ESAARG Trigger: CCCCCGAGCTGCAGATTCCCAGCCTTTCAGCCAACC...ATAAATGTAAGCGTATTTCCTTAGCTCATTATCCAGAGATGGCCAGGATGGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS-3UTR CCA 90 bp | TTCTGTTCTGAGCTCCAACTTAGGGTACCACAGGATGAAAGCAGAAACTGGCTTTGGCACTTGGGTGAATaGTCCAGAAGGAGACCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: FCSELQLRVPQDESRNWLWHLGE*SRRRPC Trigger: GCAAGGTCTCCTTCTGGACCATTCACCCAAGTGCCA...AAGCCAGTTTCTGCTTTCATCCTGTGGTACCCTAAGTTGGAGCTCAGAACAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS-3UTR TCA 90 bp | ATACTGAATGGAATGGGAGGGAATTGGAGGACTATAACTGCTGTTGTTACCAAGAGTCACCAGCATTTCTaGGACACAGCGCGTTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: ILNGMGGNWRTITAVVTKSHQHF*DTARWG Trigger: TCCCCAACGCGCTGTGTCTCAGAAATGCTGGTGACT...CTTGGTAACAACAGCAGTTATAGTCCTCCAATTCCCTCCCATTCCATTCAGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS-3UTR CCA 90 bp | CTGGGAGGCTCCTCAGTCCCTGATGCTTTTCGCTGTCAGTTCTGGTTACAAACTTGGCAAACTGTATCATaGCCATATAAGAGTAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LGGSSVPDAFRCQFWLQTWQTVS*PYKSRV Trigger: CACCCTACTCTTATATGGCCATGATACAGTTTGCCA...AGTTTGTAACCAGAACTGACAGCGAAAAGCATCAGGGACTGAGGAGCCTCCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS-3UTR CCA 90 bp | GAGGCTCCTCAGTCCCTGATGCTTTTCGCTGTCAGTTCTGGTTACAAACTTGGTTATGGAGCTCAGGATTaGGTCGTTTCTGCTGTGATT | + |
|
Preference number: 4 (lower is better) Translates to: EAPQSLMLFAVSSGYKLGYGAQD*VVSAVI Trigger: AATCACAGCAGAAACGACCCAATCCTGAGCTCCATA...ACCAAGTTTGTAACCAGAACTGACAGCGAAAAGCATCAGGGACTGAGGAGCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS-3UTR GCA 90 bp | ATTAAATCACCTCCAGGCTGTGTACGAGGTACATATGAAACAAAGGAATTTTATTCTTGGAATCCCGGCTaGTGTGGGCTTGAGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: IKSPPGCVRGTYETKEFYSWNPG*CGLEAG Trigger: CCCAGCCTCAAGCCCACAGCAGCCGGGATTCCAAGA...ATAAAATTCCTTTGTTTCATATGTACCTCGTACACAGCCTGGAGGTGATTTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS-3UTR CCA 90 bp | ATACTGAATGGAATGGGAGGGAATTGGAGGACTATAACTGCTGTTGTTACCAAGTTGGGCGTGGTGGGGTaGTTGATAATCTTGATTCCG | + |
|
Preference number: 4 (lower is better) Translates to: ILNGMGGNWRTITAVVTKLGVVG*LIILIP Trigger: CGGAATCAAGATTATCAACCACCCCACCACGCCCAA...CTTGGTAACAACAGCAGTTATAGTCCTCCAATTCCCTCCCATTCCATTCAGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| 3UTR CAA 72 bp | CTTTCAGGCCTGAATACTGAATGGAATGGGAGGGAATaGGAGGACTATAACTGCTGTTGTTACCAAGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: LSGLNTEWNGRE*EDYNCCCYQGI Trigger: GATCCCTTGGTAACAACAGCAGTTATAGTCCTCCAATTCCCTCCCATTCCATTCAGTATTCAGGCCTGAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS-3UTR TCA 90 bp | ATTAAATCACCTCCAGGCTGTGTACGAGGTACATATGAAACAAAGGAATTTTATAGCGCGTTGGGGACTTaGGCCCACAGTAGGACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: IKSPPGCVRGTYETKEFYSALGT*AHSRTS Trigger: AGAAGTCCTACTGTGGGCTCAAGTCCCCAACGCGCT...ATAAAATTCCTTTGTTTCATATGTACCTCGTACACAGCCTGGAGGTGATTTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS-3UTR TCA 90 bp | ATTAAATCACCTCCAGGCTGTGTACGAGGTACATATGAAACAAAGGAATTTTATGGACAAGGCCTTCTGTaGGAGAACGGTTGGCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: IKSPPGCVRGTYETKEFYGQGLL*ENGWLK Trigger: TTTCAGCCAACCGTTCTCTCACAGAAGGCCTTGTCC...ATAAAATTCCTTTGTTTCATATGTACCTCGTACACAGCCTGGAGGTGATTTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS-3UTR CCA 90 bp | ATTAAATCACCTCCAGGCTGTGTACGAGGTACATATGAAACAAAGGAATTTTATAGGAGACCTTGCCATTaGCAGATGTCTCTCGAACAA | + |
|
Preference number: 4 (lower is better) Translates to: IKSPPGCVRGTYETKEFYRRPCH*QMSLEQ Trigger: TTGTTCGAGAGACATCTGCCAATGGCAAGGTCTCCT...ATAAAATTCCTTTGTTTCATATGTACCTCGTACACAGCCTGGAGGTGATTTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS-3UTR CAA 90 bp | CATGCAGCAGGGGCAGGCCTTGCCCATCACCCCCAGGCTCCACCTCTCGCTCAACAAGTGCTCGGGCGATaGTGGAGACCCTGGTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: HAAGAGLAHHPQAPPLAQQVLGR*WRPWFQ Trigger: CTGGAACCAGGGTCTCCACAATCGCCCGAGCACTTG...TTGAGCGAGAGGTGGAGCCTGGGGGTGATGGGCAAGGCCTGCCCCTGCTGCATG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS CCA 90 bp | GCAGCCTGCCGCCTCACCACCAGCATAGCTCTCCTGTCTTTGCCTTaGAGGGGCTCCAGGAGGCTTGGGAACAGGCACACCCTTAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: AACRLTTSIALLSLP*RGSRRLGNRHTLSC Trigger: GCAGCTAAGGGTGTGCCTGTTCCCAAGCCTCCTGGAGCCCCTCCAAGGCAAAGACAGGAGAGCTATGCTGGTGGTGAGGCGGCAGGCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073316.13 ENSMUST00000112148.4 |
||
| CDS-3UTR CAA 90 bp | GTCCTCATGGCTCGTCACACCCACTTCACTTGCCAGCAGGGAGTGGAGGACTCGGGGGATGGCCACCACTaGTGTGTTGGGCGTGGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: VLMARHTHFTCQQGVEDSGDGHH*CVGRGG Trigger: CCCACCACGCCCAACACACAAGTGGTGGCCATCCCC...CGAGTCCTCCACTCCCTGCTGGCAAGTGAAGTGGGTGTGACGAGCCATGAGGAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS-3UTR CAA 90 bp | CATGCAGCAGGGGCAGGCCTTGCCCATCACCCCCAGGCTCCACCTCTCGCTCAAATCACCTCTGCTCTCTaGGAATCCCGGCTGCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: HAAGAGLAHHPQAPPLAQITSAL*ESRLLW Trigger: CCACAGCAGCCGGGATTCCAAGAGAGCAGAGGTGAT...TTGAGCGAGAGGTGGAGCCTGGGGGTGATGGGCAAGGCCTGCCCCTGCTGCATG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS CCA 90 bp | GCTCGGAAGACTCCGCCAGGAGCTCCACGGCTGGCCGAAATGTGCTaGAGTCCTCTGAGAAGAACAGGTCAGGCTCATCCAGACAGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: ARKTPPGAPRLAEMC*SPLRRTGQAHPDRG Trigger: CCCCCTGTCTGGATGAGCCTGACCTGTTCTTCTCAGAGGACTCCAGCACATTTCGGCCAGCCGTGGAGCTCCTGGCGGAGTCTTCCGAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073316.13 ENSMUST00000112148.4 |
||
| CDS-3UTR CAA 90 bp | GGTCCTCATGGCTCGTCACACCCACTTCACTTGCCAGCAGGGAGTGGAGGACTCTCAAAGGGCTCTGAGTaGAGGAGCTCCCGGGGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: GPHGSSHPLHLPAGSGGLSKGSE*RSSRGE Trigger: CTCGCCCCGGGAGCTCCTCAACTCAGAGCCCTTTGA...GAGTCCTCCACTCCCTGCTGGCAAGTGAAGTGGGTGTGACGAGCCATGAGGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS TCA 90 bp | TGGTGGAGGGCTGCCGAAGGGGTCAGAGGCCAGGTCAAAGGGCTCTaGGTTGAGGAGCTCCCGGGGCGAGTCAAAGAGAGGACCACTTTT | + |
|
Preference number: 5 (lower is better) Translates to: WWRAAEGVRGQVKGL*VEELPGRVKERTTF Trigger: AAAAGTGGTCCTCTCTTTGACTCGCCCCGGGAGCTCCTCAACTCAGAGCCCTTTGACCTGGCCTCTGACCCCTTCGGCAGCCCTCCACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073316.13 ENSMUST00000112148.4 |
||
| CDS GCA 90 bp | CCTTGGAGGGGCTCCAGGAGGCTTGGGAACAGGCACACCCTTAGCTaGTGGCTTCGGTCCCAACGTCTCCGTGATCACCTCTGCTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: PWRGSRRLGNRHTLS*WLRSQRLRDHLCSL Trigger: AAGAGAGCAGAGGTGATCACGGAGACGTTGGGACCGAAGCCAGCAGCTAAGGGTGTGCCTGTTCCCAAGCCTCCTGGAGCCCCTCCAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073316.13 ENSMUST00000112148.4 |
||
| CDS GCA 90 bp | CAGGCTCGGAAGACTCCGCCAGGAGCTCCACGGCTGGCCGAAATGTaGTGGAGTCCTCTGAGAAGAACAGGTCAGGCTCATCCAGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: QARKTPPGAPRLAEM*WSPLRRTGQAHPDR Trigger: CCTGTCTGGATGAGCCTGACCTGTTCTTCTCAGAGGACTCCAGCACATTTCGGCCAGCCGTGGAGCTCCTGGCGGAGTCTTCCGAGCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073316.13 ENSMUST00000112148.4 |
||
| CDS CCA 90 bp | TGGAGGGGCTCCAGGAGGCTTGGGAACAGGCACACCCTTAGCTGCTaGCTTCGGTCCCAACGTCTCCGTGATCACCTCTGCTCTCTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: WRGSRRLGNRHTLSC*LRSQRLRDHLCSLG Trigger: TCCAAGAGAGCAGAGGTGATCACGGAGACGTTGGGACCGAAGCCAGCAGCTAAGGGTGTGCCTGTTCCCAAGCCTCCTGGAGCCCCTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073316.13 ENSMUST00000112148.4 |
||
| CDS GCA 90 bp | ACAAGGCCTTCTGTGAGAGAACGGTTGGCTGAAAGGCTGGGAATCTaGAGCTCGGGGGAGCCAGGCTTGGGGCCTTCCACATGTGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: TRPSVRERLAERLGI*SSGEPGLGPSTCGG Trigger: ACCACCACATGTGGAAGGCCCCAAGCCTGGCTCCCCCGAGCTGCAGATTCCCAGCCTTTCAGCCAACCGTTCTCTCACAGAAGGCCTTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073316.13 ENSMUST00000112148.4 |
||
| CDS-3UTR CAA 90 bp | TCGTCACACCCACTTCACTTGCCAGCAGGGAGTGGAGGACTCGGACTCTGGGGGGGCGTGGTGGGGTGGTaGATAATCTTGATTCCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SSHPLHLPAGSGGLGLWGGVVGW*IILIPA Trigger: AGCCGGAATCAAGATTATCAACCACCCCACCACGCC...CCCCCAGAGTCCGAGTCCTCCACTCCCTGCTGGCAAGTGAAGTGGGTGTGACGA 60% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
||
| CDS TCA 90 bp | ATTCATTGTGTCCAGGACAAGGCCTTCTGTGAGAGAACGGTTGGCTaGAAGGCTGGGAATCTGCAGCTCGGGGGAGCCAGGCTTGGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: IHCVQDKAFCERTVG*KAGNLQLGGARLGA Trigger: GGCCCCAAGCCTGGCTCCCCCGAGCTGCAGATTCCCAGCCTTTCAGCCAACCGTTCTCTCACAGAAGGCCTTGTCCTGGACACAATGAAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073316.13 ENSMUST00000112148.4 |
||
| CDS CCA 90 bp | CTGTGGCAGGAAGCGGGGCTATTCCTTCACTGGATAGCAACACCTTaGGTGCAATGCGGACTCGCTTGCTATGACGGGCGAGCTCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LWQEAGLFLHWIATP*VQCGLACYDGRALS Trigger: GCTCAGAGCTCGCCCGTCATAGCAAGCGAGTCCGCATTGCACCCAAGGTGTTGCTATCCAGTGAAGGAATAGCCCCGCTTCCTGCCACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073316.13 ENSMUST00000112148.4 ENSMUST00000203040.3 |
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| CDS CCA 90 bp | CTGCCGCTCTCCTTCCCTTTGGCAGTTAGCGCTGTGATGATGCTCTaGATATCAGCGTTGCTGGGGATGGCCACCACTTGTGTGTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LPLSFPLAVSAVMML*ISALLGMATTCVLG Trigger: GCCCAACACACAAGTGGTGGCCATCCCCAGCAACGCTGATATCCAGAGCATCATCACAGCGCTAACTGCCAAAGGGAAGGAGAGCGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073316.13 ENSMUST00000112148.4 |
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| CDS-3UTR CAA 90 bp | TCGTCACACCCACTTCACTTGCCAGCAGGGAGTGGAGGACTCGGACTCTGGGGGCCAAGCCACTGGATATaGGTTAAGCTGTTGTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SSHPLHLPAGSGGLGLWGPSHWI*VKLLSS Trigger: GCTGGACAACAGCTTAACCAATATCCAGTGGCTTGG...CCCCCAGAGTCCGAGTCCTCCACTCCCTGCTGGCAAGTGAAGTGGGTGTGACGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| CDS-3UTR CAA 90 bp | GGTCCTCATGGCTCGTCACACCCACTTCACTTGCCAGCAGGGAGTGGAGGACTCAGTAGCGATTGGCACTaGGGTGAATGGTCCAGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: GPHGSSHPLHLPAGSGGLSSDWH*GEWSRR Trigger: CCTTCTGGACCATTCACCCAAGTGCCAATCGCTACT...GAGTCCTCCACTCCCTGCTGGCAAGTGAAGTGGGTGTGACGAGCCATGAGGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| CDS TCA 90 bp | TCACTGGATAGCAACACCTTGGGTGCAATGCGGACTCGCTTGCTATaGCGGGCGAGCTCTGAGCTCATAAGCGATGCTGCCAGAGGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: SLDSNTLGAMRTRLL*RASSELISDAARGK Trigger: CTTGCCTCTGGCAGCATCGCTTATGAGCTCAGAGCTCGCCCGTCATAGCAAGCGAGTCCGCATTGCACCCAAGGTGTTGCTATCCAGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073316.13 ENSMUST00000112148.4 ENSMUST00000203040.3 |
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| CDS CCA 90 bp | CCTCCTTCGGTGGTTCTGTGGCAGGAAGCGGGGCTATTCCTTCACTaGATAGCAACACCTTGGGTGCAATGCGGACTCGCTTGCTATGAC | + |
|
Preference number: 5 (lower is better) Translates to: PPSVVLWQEAGLFLH*IATPWVQCGLACYD Trigger: GTCATAGCAAGCGAGTCCGCATTGCACCCAAGGTGTTGCTATCCAGTGAAGGAATAGCCCCGCTTCCTGCCACAGAACCACCGAAGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073316.13 ENSMUST00000112148.4 ENSMUST00000203040.3 |
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| CDS-3UTR CAA 90 bp | TCGTCACACCCACTTCACTTGCCAGCAGGGAGTGGAGGACTCGGACTCTGGGGGCAGTGGCTTAAACACTaGGTCCAATGTCAAGTAGCG | + |
|
Preference number: 5 (lower is better) Translates to: SSHPLHLPAGSGGLGLWGQWLKH*VQCQVA Trigger: CGCTACTTGACATTGGACCAAGTGTTTAAGCCACTG...CCCCCAGAGTCCGAGTCCTCCACTCCCTGCTGGCAAGTGAAGTGGGTGTGACGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| CDS-3UTR CAA 90 bp | CCAGGAGAGGCGGCTTTGGAGGAAAGCCCTTTCTGGTACCATTGTTTGCTGCTACTCTGGATATCAGCGTaGCTGGGGATGGCCACCACT | + |
|
Preference number: 5 (lower is better) Translates to: PGEAALEESPFWYHCLLLLWISA*LGMATT Trigger: AGTGGTGGCCATCCCCAGCAACGCTGATATCCAGAG...TAGCAGCAAACAATGGTACCAGAAAGGGCTTTCCTCCAAAGCCGCCTCTCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| CDS TCA 90 bp | GACACTCCTGAGGGCTCCTCAACCTTAACCCGATTCTGCTCCAGGTaGCAATTCTCCTTCTCTTCCAGTTCCTGCTTAACGCTGCAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: DTPEGSSTLTRFCSR*QFSFSSSSCLTLQG Trigger: CCCCTGCAGCGTTAAGCAGGAACTGGAAGAGAAGGAGAATTGTCACCTGGAGCAGAATCGGGTTAAGGTTGAGGAGCCCTCAGGAGTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000073316.13 ENSMUST00000112148.4 ENSMUST00000203040.3 ENSMUST00000203258.2 |
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| CDS GCA 90 bp | TCATCTTTCCAAGCCACTGGATATTGGTTAAGCTGTTGTCCAGCGTaGAGCCTGCCGCCTCACCACCAGCATAGCTCTCCTGTCTTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SSFQATGYWLSCCPA*SLPPHHQHSSPVFA Trigger: GGCAAAGACAGGAGAGCTATGCTGGTGGTGAGGCGGCAGGCTGCACGCTGGACAACAGCTTAACCAATATCCAGTGGCTTGGAAAGATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073316.13 ENSMUST00000112148.4 ENSMUST00000203040.3 |
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| CDS-3UTR CAA 90 bp | GAACCCACAGTGTGGAGAGACTGCACTGCAGGTCCTTCCCCCAGAGGCCACAAGGGGTGGTTGATAATCTaGATTCCGGCTGGAAATTTG | + |
|
Preference number: 5 (lower is better) Translates to: EPTVWRDCTAGPSPRGHKGWLII*IPAGNL Trigger: CAAATTTCCAGCCGGAATCAAGATTATCAACCACCC...CTTGTGGCCTCTGGGGGAAGGACCTGCAGTGCAGTCTCTCCACACTGTGGGTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| CDS-3UTR CAA 90 bp | TTCTGTTCTGAGCTCCAACTTAGGGTACCACAGGATGAAAGCAGAAACTGGCTTTCGGGGGAGCCAGGCTaGGGGCCTTCCACATGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: FCSELQLRVPQDESRNWLSGEPG*GPSTCG Trigger: ACCACATGTGGAAGGCCCCAAGCCTGGCTCCCCCGA...AAGCCAGTTTCTGCTTTCATCCTGTGGTACCCTAAGTTGGAGCTCAGAACAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| CDS TCA 90 bp | TCGGCTCACCTCCCTTTTCTCTCTTCGCTTAGTCACCAGCATTTCTaGGACACAGCGCGTTGGGGACTTGAGCCCACAGTAGGACTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: SAHLPFLSSLSHQHF*DTARWGLEPTVGLL Trigger: AAGAAGTCCTACTGTGGGCTCAAGTCCCCAACGCGCTGTGTCTCAGAAATGCTGGTGACTAAGCGAAGAGAGAAAAGGGAGGTGAGCCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073316.13 ENSMUST00000112148.4 ENSMUST00000203040.3 |
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| CDS-3UTR CAA 90 bp | CATGGCGTCTCAAAGTGGAAAATTCCACATTTGACCTTTGTGATGAGCCTCAGTATGAGGATGAACCGGTaGGGCCCGCTGCTGCCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: HGVSKWKIPHLTFVMSLSMRMNR*GPLLPL Trigger: GAGCGGCAGCAGCGGGCCCAACCGGTTCATCCTCAT...ACTGAGGCTCATCACAAAGGTCAAATGTGGAATTTTCCACTTTGAGACGCCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| CDS-3UTR CAA 90 bp | CCAGGAGAGGCGGCTTTGGAGGAAAGCCCTTTCTGGTACCATTGTTTGCTGCTAATATTGGTTAAGCTGTaGTCCAGCGTGCAGCCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: PGEAALEESPFWYHCLLLILVKL*SSVQPA Trigger: GGCAGGCTGCACGCTGGACAACAGCTTAACCAATAT...TAGCAGCAAACAATGGTACCAGAAAGGGCTTTCCTCCAAAGCCGCCTCTCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| CDS-3UTR CAA 90 bp | CTTGGGGAGCTGCGAGGAAAGGGCAGTAAGCAGGATCCTGGCACGGCAACCTGTTTTCTCTCAGTGCTGTaGATGGCAAACTGTATCATG | + |
|
Preference number: 5 (lower is better) Translates to: LGELRGKGSKQDPGTATCFLSVL*MANCIM Trigger: CATGATACAGTTTGCCATCAACAGCACTGAGAGAAA...ACAGGTTGCCGTGCCAGGATCCTGCTTACTGCCCTTTCCTCGCAGCTCCCCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| CDS-3UTR CAA 90 bp | GAGGCTCCTCAGTCCCTGATGCTTTTCGCTGTCAGTTCTGGTTACAAACTTGGTCTGGATAGCAACACCTaGGGTGCAATGCGGACTCGC | + |
|
Preference number: 5 (lower is better) Translates to: EAPQSLMLFAVSSGYKLGLDSNT*GAMRTR Trigger: GCGAGTCCGCATTGCACCCAAGGTGTTGCTATCCAG...ACCAAGTTTGTAACCAGAACTGACAGCGAAAAGCATCAGGGACTGAGGAGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| CDS-3UTR CAA 90 bp | CATGGCGTCTCAAAGTGGAAAATTCCACATTTGACCTTTGTGATGAGCCTCAGTGGCAGCCTCCGTCTTTaGAGAATCAGTGGCCGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: HGVSKWKIPHLTFVMSLSGSLRL*RISGRR Trigger: CCGCCGGCCACTGATTCTCAAAAGACGGAGGCTGCC...ACTGAGGCTCATCACAAAGGTCAAATGTGGAATTTTCCACTTTGAGACGCCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| CDS-3UTR CAA 90 bp | GGTCCTCATGGCTCGTCACACCCACTTCACTTGCCAGCAGGGAGTGGAGGACTCAGTGGGATTTCAGTTTaGATGGTCACATTTCTATGG | + |
|
Preference number: 5 (lower is better) Translates to: GPHGSSHPLHLPAGSGGLSGISV*MVTFLW Trigger: CCATAGAAATGTGACCATCAAAACTGAAATCCCACT...GAGTCCTCCACTCCCTGCTGGCAAGTGAAGTGGGTGTGACGAGCCATGAGGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| CDS TCA 90 bp | GCAGAGGCTTCATCTTTCGCCGTGCGCCCAGTGGGATTTCAGTTTTaGTGGTCACATTTCTATGGAGCTCAGGATTGGGTCGTTTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: AEASSFAVRPVGFQF*WSHFYGAQDWVVSA Trigger: AGCAGAAACGACCCAATCCTGAGCTCCATAGAAATGTGACCATCAAAACTGAAATCCCACTGGGCGCACGGCGAAAGATGAAGCCTCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073316.13 ENSMUST00000112148.4 ENSMUST00000203040.3 ENSMUST00000203258.2 |
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| CDS-3UTR CAA 90 bp | TCCCCATCCTGGCCATCTCTGGATAATGAGCTAAGGAAATACGCTTACATTTATGCCACCACTTGTGTGTaGGGCGTGGTGGGGTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SPSWPSLDNELRKYAYIYATTCV*GVVGWL Trigger: CAACCACCCCACCACGCCCAACACACAAGTGGTGGC...ATAAATGTAAGCGTATTTCCTTAGCTCATTATCCAGAGATGGCCAGGATGGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| CDS-3UTR CAA 90 bp | CTCCCTGGCATGATTGGGAACACTATCAGAGAAACACCTAATAGGACTCCTGTGTCCTTGATGGGGGTCTaGAAAGGTCCTCCCTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LPGMIGNTIRETPNRTPVSLMGV*KGPPSS Trigger: GGAAGAGGGAGGACCTTTCAAGACCCCCATCAAGGA...CACAGGAGTCCTATTAGGTGTTTCTCTGATAGTGTTCCCAATCATGCCAGGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| CDS TCA 90 bp | TGTGCTATGTCCTCCTCAGGCTGCATTTCTTCTTCCTTAATGGACTaGATAGGAAGTAAAGGCAACAGCCCTTCCCCTCCAAGCAGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: CAMSSSGCISSSLMD*IGSKGNSPSPPSRG Trigger: ACCCCTGCTTGGAGGGGAAGGGCTGTTGCCTTTACTTCCTATTCAGTCCATTAAGGAAGAAGAAATGCAGCCTGAGGAGGACATAGCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073316.13 ENSMUST00000112148.4 ENSMUST00000203040.3 |
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| CDS-3UTR CAA 90 bp | TCCCCATCCTGGCCATCTCTGGATAATGAGCTAAGGAAATACGCTTACATTTATATAGCTCTCCTGTCTTaGCCTTGGAGGGGCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SPSWPSLDNELRKYAYIYIALLS*PWRGSR Trigger: CCTGGAGCCCCTCCAAGGCAAAGACAGGAGAGCTAT...ATAAATGTAAGCGTATTTCCTTAGCTCATTATCCAGAGATGGCCAGGATGGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| CDS-3UTR CAA 90 bp | TCCAACTTAGGGTACCACAGGATGAAAGCAGAAACTGGCTTATGTACCAGAGACGTCCAGAAGGAGACCTaGCCATTGGCAGATGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SNLGYHRMKAETGLCTRDVQKET*PLADVS Trigger: AGAGACATCTGCCAATGGCAAGGTCTCCTTCTGGAC...GTCTCTGGTACATAAGCCAGTTTCTGCTTTCATCCTGTGGTACCCTAAGTTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| CDS GCA 90 bp | TCAAGTAGCGATTGGCACTTGGGTGAATGGTCCAGAAGGAGACCTTaGCATTGGCAGATGTCTCTCGAACAAACATGTCATGGAGAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SSSDWHLGEWSRRRP*HWQMSLEQTCHGEK Trigger: TTTCTCTCCATGACATGTTTGTTCGAGAGACATCTGCCAATGGCAAGGTCTCCTTCTGGACCATTCACCCAAGTGCCAATCGCTACTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000073316.13 ENSMUST00000112148.4 ENSMUST00000203040.3 ENSMUST00000203258.2 |
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| CDS-3UTR CAA 90 bp | TCCAACTTAGGGTACCACAGGATGAAAGCAGAAACTGGCTTATGTACCAGAGACCTATGGAGCTCAGGATaGGGTCGTTTCTGCTGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: SNLGYHRMKAETGLCTRDLWSSG*GRFCCD Trigger: ATCACAGCAGAAACGACCCAATCCTGAGCTCCATAG...GTCTCTGGTACATAAGCCAGTTTCTGCTTTCATCCTGTGGTACCCTAAGTTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| CDS TCA 90 bp | AAGTGTAGATGTCCTTCAAGGTCATGCGCTTTCTCTCAGTGCTGTTaGTGGCAAACTGTATCATGGCCATATAAGAGTAGGGTGGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: KCRCPSRSCAFSQCC*WQTVSWPYKSRVAS Trigger: AGAGGCCACCCTACTCTTATATGGCCATGATACAGTTTGCCATCAACAGCACTGAGAGAAAGCGCATGACCTTGAAGGACATCTACACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000073316.13 ENSMUST00000112148.4 ENSMUST00000203040.3 ENSMUST00000203258.2 |
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| CDS-3UTR CAA 90 bp | CTGAATACTGAATGGAATGGGAGGGAATTGGAGGACTATAACTGCTGTTGTTACATTCCGGCTGGAAATTaGCAAGAGCTGGACTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: LNTEWNGRELEDYNCCCYIPAGN*QELDSA Trigger: GGCAGAGTCCAGCTCTTGCAAATTTCCAGCCGGAAT...GTAACAACAGCAGTTATAGTCCTCCAATTCCCTCCCATTCCATTCAGTATTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| CDS-3UTR CAA 90 bp | TCCCCATCCTGGCCATCTCTGGATAATGAGCTAAGGAAATACGCTTACATTTATGGAGGGCTCTCCACTTaGATAGGCCTCTCTAAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: SPSWPSLDNELRKYAYIYGGLST*IGLSKC Trigger: ACACTTAGAGAGGCCTATCAAAGTGGAGAGCCCTCC...ATAAATGTAAGCGTATTTCCTTAGCTCATTATCCAGAGATGGCCAGGATGGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| CDS-3UTR CAA 90 bp | ATTAAATCACCTCCAGGCTGTGTACGAGGTACATATGAAACAAAGGAATTTTATAAGGAGACCTTGCCATaGGCAGATGTCTCTCGAACA | + |
|
Preference number: 5 (lower is better) Translates to: IKSPPGCVRGTYETKEFYKETLP*ADVSRT Trigger: TGTTCGAGAGACATCTGCCAATGGCAAGGTCTCCTT...ATAAAATTCCTTTGTTTCATATGTACCTCGTACACAGCCTGGAGGTGATTTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| CDS CAA 72 bp | GAAAGGCTGGGAATCTGCAGCTCGGGGGAGCCAGGCTaGGGGCCTTCCACATGTGGTGGTGGAGGGCTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: ERLGICSSGEPG*GPSTCGGGGLP Trigger: CGGCAGCCCTCCACCACCACATGTGGAAGGCCCCAAGCCTGGCTCCCCCGAGCTGCAGATTCCCAGCCTTTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073316.13 ENSMUST00000112148.4 |
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| CDS GCA 72 bp | CAGGCTTGGGGCCTTCCACATGTGGTGGTGGAGGGCTaGCGAAGGGGTCAGAGGCCAGGTCAAAGGGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: QAWGLPHVVVEG*RRGQRPGQRAL Trigger: CAGAGCCCTTTGACCTGGCCTCTGACCCCTTCGGCAGCCCTCCACCACCACATGTGGAAGGCCCCAAGCCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073316.13 ENSMUST00000112148.4 |
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| CDS TCA 72 bp | GCTGCCGAAGGGGTCAGAGGCCAGGTCAAAGGGCTCTaGGTTGAGGAGCTCCCGGGGCGAGTCAAAGAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: AAEGVRGQVKGL*VEELPGRVKER Trigger: CCTCTCTTTGACTCGCCCCGGGAGCTCCTCAACTCAGAGCCCTTTGACCTGGCCTCTGACCCCTTCGGCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073316.13 ENSMUST00000112148.4 |
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| CDS CAA 72 bp | GCCTGCCGCCTCACCACCAGCATAGCTCTCCTGTCTTaGCCTTGGAGGGGCTCCAGGAGGCTTGGGAACAGG | + |
|
Preference number: 6 (lower is better) Translates to: ACRLTTSIALLS*PWRGSRRLGNR Trigger: CCTGTTCCCAAGCCTCCTGGAGCCCCTCCAAGGCAAAGACAGGAGAGCTATGCTGGTGGTGAGGCGGCAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073316.13 ENSMUST00000112148.4 |
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| CDS CAA 90 bp | CAGCGTGCAGCCTGCCGCCTCACCACCAGCATAGCTCTCCTGTCTTaGCCTTGGAGGGGCTCCAGGAGGCTTGGGAACAGGCACACCCTT | + |
|
Preference number: 6 (lower is better) Translates to: QRAACRLTTSIALLS*PWRGSRRLGNRHTL Trigger: AAGGGTGTGCCTGTTCCCAAGCCTCCTGGAGCCCCTCCAAGGCAAAGACAGGAGAGCTATGCTGGTGGTGAGGCGGCAGGCTGCACGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073316.13 ENSMUST00000112148.4 |
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| CDS GCA 72 bp | GGCTCCAGGAGGCTTGGGAACAGGCACACCCTTAGCTaGTGGCTTCGGTCCCAACGTCTCCGTGATCACCTC | + |
|
Preference number: 6 (lower is better) Translates to: GSRRLGNRHTLS*WLRSQRLRDHL Trigger: GAGGTGATCACGGAGACGTTGGGACCGAAGCCAGCAGCTAAGGGTGTGCCTGTTCCCAAGCCTCCTGGAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073316.13 ENSMUST00000112148.4 |
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| CDS CAA 72 bp | CCGAAGGGGTCAGAGGCCAGGTCAAAGGGCTCTGAGTaGAGGAGCTCCCGGGGCGAGTCAAAGAGAGGACCA | + |
|
Preference number: 6 (lower is better) Translates to: PKGSEARSKGSE*RSSRGESKRGP Trigger: TGGTCCTCTCTTTGACTCGCCCCGGGAGCTCCTCAACTCAGAGCCCTTTGACCTGGCCTCTGACCCCTTCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073316.13 ENSMUST00000112148.4 |
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| CDS TCA 72 bp | GTCCAGGACAAGGCCTTCTGTGAGAGAACGGTTGGCTaGAAGGCTGGGAATCTGCAGCTCGGGGGAGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: VQDKAFCERTVG*KAGNLQLGGAR Trigger: CCTGGCTCCCCCGAGCTGCAGATTCCCAGCCTTTCAGCCAACCGTTCTCTCACAGAAGGCCTTGTCCTGGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073316.13 ENSMUST00000112148.4 |
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| CDS GCA 72 bp | TCTGTGAGAGAACGGTTGGCTGAAAGGCTGGGAATCTaGAGCTCGGGGGAGCCAGGCTTGGGGCCTTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: SVRERLAERLGI*SSGEPGLGPST Trigger: TGTGGAAGGCCCCAAGCCTGGCTCCCCCGAGCTGCAGATTCCCAGCCTTTCAGCCAACCGTTCTCTCACAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073316.13 ENSMUST00000112148.4 |
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| CDS CCA 72 bp | TCCAGGAGGCTTGGGAACAGGCACACCCTTAGCTGCTaGCTTCGGTCCCAACGTCTCCGTGATCACCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SRRLGNRHTLSC*LRSQRLRDHLC Trigger: GCAGAGGTGATCACGGAGACGTTGGGACCGAAGCCAGCAGCTAAGGGTGTGCCTGTTCCCAAGCCTCCTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073316.13 ENSMUST00000112148.4 |
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| CDS CAA 90 bp | TTCCCTTTGGCAGTTAGCGCTGTGATGATGCTCTGGATATCAGCGTaGCTGGGGATGGCCACCACTTGTGTGTTGGGCGTGGTGGGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: FPLAVSAVMMLWISA*LGMATTCVLGVVGW Trigger: CCACCCCACCACGCCCAACACACAAGTGGTGGCCATCCCCAGCAACGCTGATATCCAGAGCATCATCACAGCGCTAACTGCCAAAGGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073316.13 ENSMUST00000112148.4 |
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| CDS TCA 72 bp | TGCAATGCGGACTCGCTTGCTATGACGGGCGAGCTCTaGGCTCATAAGCGATGCTGCCAGAGGCAAGGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: CNADSLAMTGEL*AHKRCCQRQGN Trigger: GTTCCCTTGCCTCTGGCAGCATCGCTTATGAGCTCAGAGCTCGCCCGTCATAGCAAGCGAGTCCGCATTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073316.13 ENSMUST00000112148.4 ENSMUST00000203040.3 |
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| CDS TCA 72 bp | AGCAACACCTTGGGTGCAATGCGGACTCGCTTGCTATaGCGGGCGAGCTCTGAGCTCATAAGCGATGCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: SNTLGAMRTRLL*RASSELISDAA Trigger: GGCAGCATCGCTTATGAGCTCAGAGCTCGCCCGTCATAGCAAGCGAGTCCGCATTGCACCCAAGGTGTTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073316.13 ENSMUST00000112148.4 ENSMUST00000203040.3 |
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| CDS GCA 72 bp | AAGACTCCGCCAGGAGCTCCACGGCTGGCCGAAATGTaGTGGAGTCCTCTGAGAAGAACAGGTCAGGCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: KTPPGAPRLAEM*WSPLRRTGQAH Trigger: ATGAGCCTGACCTGTTCTTCTCAGAGGACTCCAGCACATTTCGGCCAGCCGTGGAGCTCCTGGCGGAGTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073316.13 ENSMUST00000112148.4 |
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| CDS CAA 90 bp | GTAGGAGAGCAGGAAGAATCTTCCCAGGAGTTGGATAGCTCCTCTTaGAGCGATGCACACGGAGAGGGCCACTCTTCCAAGGGAGGGCTC | + |
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Preference number: 6 (lower is better) Translates to: VGEQEESSQELDSSS*SDAHGEGHSSKGGL Trigger: GAGCCCTCCCTTGGAAGAGTGGCCCTCTCCGTGTGCATCGCTCAAAGAGGAGCTATCCAACTCCTGGGAAGATTCTTCCTGCTCTCCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073316.13 ENSMUST00000112148.4 ENSMUST00000203040.3 |
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| CDS GCA 72 bp | CAAGCCACTGGATATTGGTTAAGCTGTTGTCCAGCGTaGAGCCTGCCGCCTCACCACCAGCATAGCTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: QATGYWLSCCPA*SLPPHHQHSSP Trigger: AGGAGAGCTATGCTGGTGGTGAGGCGGCAGGCTGCACGCTGGACAACAGCTTAACCAATATCCAGTGGCTTG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073316.13 ENSMUST00000112148.4 ENSMUST00000203040.3 |
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| CDS GCA 72 bp | AGCTCAGGATTGGGTCGTTTCTGCTGTGATTCCAAGTaGTCGGGCGATTGTGGAGACCCTGGTTCCAGTGGC | + |
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Preference number: 6 (lower is better) Translates to: SSGLGRFCCDSK*SGDCGDPGSSG Trigger: GCCACTGGAACCAGGGTCTCCACAATCGCCCGAGCACTTGGAATCACAGCAGAAACGACCCAATCCTGAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| CDS GCA 72 bp | TCAGGATTGGGTCGTTTCTGCTGCTGTGATTCCAAGTaGTCGGGCGATTGTGGAGACCCTGGTTCCAGTGGC | + |
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Preference number: 6 (lower is better) Translates to: SGLGRFCCCDSK*SGDCGDPGSSG Trigger: GCCACTGGAACCAGGGTCTCCACAATCGCCCGAGCACTTGGAATCACAGCAGCAGAAACGACCCAATCCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203040.3 |
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| CDS CCA 72 bp | GAAGCGGGGCTATTCCTTCACTGGATAGCAACACCTTaGGTGCAATGCGGACTCGCTTGCTATGACGGGCGA | + |
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Preference number: 6 (lower is better) Translates to: EAGLFLHWIATP*VQCGLACYDGR Trigger: TCGCCCGTCATAGCAAGCGAGTCCGCATTGCACCCAAGGTGTTGCTATCCAGTGAAGGAATAGCCCCGCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073316.13 ENSMUST00000112148.4 ENSMUST00000203040.3 |
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| CDS CCA 72 bp | GTGGTTCTGTGGCAGGAAGCGGGGCTATTCCTTCACTaGATAGCAACACCTTGGGTGCAATGCGGACTCGCT | + |
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Preference number: 6 (lower is better) Translates to: VVLWQEAGLFLH*IATPWVQCGLA Trigger: AGCGAGTCCGCATTGCACCCAAGGTGTTGCTATCCAGTGAAGGAATAGCCCCGCTTCCTGCCACAGAACCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073316.13 ENSMUST00000112148.4 ENSMUST00000203040.3 |
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| CDS CCA 72 bp | CTCCAAGCAGGGGTTTCTCCTCCTTCGGTGGTTCTGTaGCAGGAAGCGGGGCTATTCCTTCACTGGATAGCA | + |
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Preference number: 6 (lower is better) Translates to: LQAGVSPPSVVL*QEAGLFLHWIA Trigger: TGCTATCCAGTGAAGGAATAGCCCCGCTTCCTGCCACAGAACCACCGAAGGAGGAGAAACCCCTGCTTGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073316.13 ENSMUST00000112148.4 ENSMUST00000203040.3 |
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| CDS CAA 72 bp | GCAGTTAGCGCTGTGATGATGCTCTGGATATCAGCGTaGCTGGGGATGGCCACCACTTGTGTGTTGGGCGTG | + |
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Preference number: 6 (lower is better) Translates to: AVSAVMMLWISA*LGMATTCVLGV Trigger: CACGCCCAACACACAAGTGGTGGCCATCCCCAGCAACGCTGATATCCAGAGCATCATCACAGCGCTAACTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073316.13 ENSMUST00000112148.4 |
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| CDS CAA 90 bp | GATGCACACGGAGAGGGCCACTCTTCCAAGGGAGGGCTCTCCACTTaGATAGGCCTCTCTAAGTGTGCTATGTCCTCCTCAGGCTGCATT | + |
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Preference number: 6 (lower is better) Translates to: DAHGEGHSSKGGLST*IGLSKCAMSSSGCI Trigger: AATGCAGCCTGAGGAGGACATAGCACACTTAGAGAGGCCTATCAAAGTGGAGAGCCCTCCCTTGGAAGAGTGGCCCTCTCCGTGTGCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073316.13 ENSMUST00000112148.4 ENSMUST00000203040.3 |
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| CDS GCA 72 bp | CTATTCCTTCACTGGATAGCAACACCTTGGGTGCAATaGGGACTCGCTTGCTATGACGGGCGAGCTCTGAGC | + |
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Preference number: 6 (lower is better) Translates to: LFLHWIATPWVQ*GLACYDGRALS Trigger: GCTCAGAGCTCGCCCGTCATAGCAAGCGAGTCCGCATTGCACCCAAGGTGTTGCTATCCAGTGAAGGAATAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073316.13 ENSMUST00000112148.4 ENSMUST00000203040.3 |
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| CDS CAA 72 bp | CTCATCTTTCCAAGCCACTGGATATTGGTTAAGCTGTaGTCCAGCGTGCAGCCTGCCGCCTCACCACCAGCA | + |
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Preference number: 6 (lower is better) Translates to: LIFPSHWILVKL*SSVQPAASPPA Trigger: TGCTGGTGGTGAGGCGGCAGGCTGCACGCTGGACAACAGCTTAACCAATATCCAGTGGCTTGGAAAGATGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073316.13 ENSMUST00000112148.4 ENSMUST00000203040.3 |
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| CDS CAA 72 bp | GGAGAGGGCCACTCTTCCAAGGGAGGGCTCTCCACTTaGATAGGCCTCTCTAAGTGTGCTATGTCCTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: GEGHSSKGGLST*IGLSKCAMSSS Trigger: TGAGGAGGACATAGCACACTTAGAGAGGCCTATCAAAGTGGAGAGCCCTCCCTTGGAAGAGTGGCCCTCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073316.13 ENSMUST00000112148.4 ENSMUST00000203040.3 |
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| CDS CAA 72 bp | AGCCTCCAGGACTCAGGGTCTCTAGAGAGCACAGACTaGCTAGGAGTGGAGGAGACAGGCAATGTCTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: SLQDSGSLESTD*LGVEETGNVSL Trigger: CAAGGAGACATTGCCTGTCTCCTCCACTCCTAGCAAGTCTGTGCTCTCTAGAGACCCTGAGTCCTGGAGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073316.13 ENSMUST00000112148.4 |
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| CDS CAA 90 bp | TTCTTGGGCTTTGGGGTAGGAGAGCAGGAAGAATCTTCCCAGGAGTaGGATAGCTCCTCTTTGAGCGATGCACACGGAGAGGGCCACTCT | + |
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Preference number: 6 (lower is better) Translates to: FLGFGVGEQEESSQE*DSSSLSDAHGEGHS Trigger: AGAGTGGCCCTCTCCGTGTGCATCGCTCAAAGAGGAGCTATCCAACTCCTGGGAAGATTCTTCCTGCTCTCCTACCCCAAAGCCCAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073316.13 ENSMUST00000112148.4 ENSMUST00000203040.3 |
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| CDS TCA 72 bp | AGGAAGAATCTTCCCAGGAGTTGGATAGCTCCTCTTTaGGCGATGCACACGGAGAGGGCCACTCTTCCAAGG | + |
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Preference number: 6 (lower is better) Translates to: RKNLPRSWIAPL*AMHTERATLPR Trigger: CCTTGGAAGAGTGGCCCTCTCCGTGTGCATCGCTCAAAGAGGAGCTATCCAACTCCTGGGAAGATTCTTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073316.13 ENSMUST00000112148.4 ENSMUST00000203040.3 |
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| CDS CAA 90 bp | ATGGCCACCACTTGTGTGTTGGGCGTGGTGGGGTGGTTGATAATCTaGATTCCGGCTGGAAATTTGCAAGAGCTGGACTCTGCCACCTCT | + |
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Preference number: 6 (lower is better) Translates to: MATTCVLGVVGWLII*IPAGNLQELDSATS Trigger: AGAGGTGGCAGAGTCCAGCTCTTGCAAATTTCCAGCCGGAATCAAGATTATCAACCACCCCACCACGCCCAACACACAAGTGGTGGCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073316.13 ENSMUST00000112148.4 |
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| CDS CAA 90 bp | TTGCTGGGGATGGCCACCACTTGTGTGTTGGGCGTGGTGGGGTGGTaGATAATCTTGATTCCGGCTGGAAATTTGCAAGAGCTGGACTCT | + |
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Preference number: 6 (lower is better) Translates to: LLGMATTCVLGVVGW*IILIPAGNLQELDS Trigger: AGAGTCCAGCTCTTGCAAATTTCCAGCCGGAATCAAGATTATCAACCACCCCACCACGCCCAACACACAAGTGGTGGCCATCCCCAGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073316.13 ENSMUST00000112148.4 |
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| CDS TCA 72 bp | CTCCCTTTTCTCTCTTCGCTTAGTCACCAGCATTTCTaGGACACAGCGCGTTGGGGACTTGAGCCCACAGTA | + |
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Preference number: 6 (lower is better) Translates to: LPFLSSLSHQHF*DTARWGLEPTV Trigger: TACTGTGGGCTCAAGTCCCCAACGCGCTGTGTCTCAGAAATGCTGGTGACTAAGCGAAGAGAGAAAAGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073316.13 ENSMUST00000112148.4 ENSMUST00000203040.3 |
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| CDS CAA 90 bp | AGAGGGTCCTCCTCCAGGCCAGGGAAACTGATGTCTAGAAGGATCTaGCTGAGGCTATCATTCATTGTGTCCAGGACAAGGCCTTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: RGSSSRPGKLMSRRI*LRLSFIVSRTRPSV Trigger: CACAGAAGGCCTTGTCCTGGACACAATGAATGATAGCCTCAGCAAGATCCTTCTAGACATCAGTTTCCCTGGCCTGGAGGAGGACCCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073316.13 ENSMUST00000112148.4 |
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| CDS CAA 90 bp | AGCAGAGGCTTCATCTTTCGCCGTGCGCCCAGTGGGATTTCAGTTTaGATGGTCACATTTCTATGGAGCTCAGGATTGGGTCGTTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: SRGFIFRRAPSGISV*MVTFLWSSGLGRFC Trigger: GCAGAAACGACCCAATCCTGAGCTCCATAGAAATGTGACCATCAAAACTGAAATCCCACTGGGCGCACGGCGAAAGATGAAGCCTCTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000073316.13 ENSMUST00000112148.4 ENSMUST00000203040.3 ENSMUST00000203258.2 |
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| CDS TCA 72 bp | GAGGGCTCCTCAACCTTAACCCGATTCTGCTCCAGGTaGCAATTCTCCTTCTCTTCCAGTTCCTGCTTAACG | + |
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Preference number: 6 (lower is better) Translates to: EGSSTLTRFCSR*QFSFSSSSCLT Trigger: CGTTAAGCAGGAACTGGAAGAGAAGGAGAATTGTCACCTGGAGCAGAATCGGGTTAAGGTTGAGGAGCCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000073316.13 ENSMUST00000112148.4 ENSMUST00000203040.3 ENSMUST00000203258.2 |
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| CDS GCA 72 bp | GTCACATTTCTATGGAGCTCAGGATTGGGTCGTTTCTaGTGTGATTCCAAGTGCTCGGGCGATTGTGGAGAC | + |
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Preference number: 6 (lower is better) Translates to: VTFLWSSGLGRF*CDSKCSGDCGD Trigger: GTCTCCACAATCGCCCGAGCACTTGGAATCACAGCAGAAACGACCCAATCCTGAGCTCCATAGAAATGTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| CDS GCA 72 bp | GTCACATTTCTATGGAGCTCAGGATTGGGTCGTTTCTaGTGCTGTGATTCCAAGTGCTCGGGCGATTGTGGA | + |
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Preference number: 6 (lower is better) Translates to: VTFLWSSGLGRF*CCDSKCSGDCG Trigger: TCCACAATCGCCCGAGCACTTGGAATCACAGCAGCAGAAACGACCCAATCCTGAGCTCCATAGAAATGTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203040.3 |
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| CDS CCA 72 bp | AGGGAGCAGAGGCTTCATCTTTCGCCGTGCGCCCAGTaGGATTTCAGTTTTGATGGTCACATTTCTATGGAG | + |
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Preference number: 6 (lower is better) Translates to: REQRLHLSPCAQ*DFSFDGHISME Trigger: CTCCATAGAAATGTGACCATCAAAACTGAAATCCCACTGGGCGCACGGCGAAAGATGAAGCCTCTGCTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073316.13 ENSMUST00000112148.4 ENSMUST00000203040.3 ENSMUST00000203258.2 |
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| CDS CAA 72 bp | ATGGCCACCACTTGTGTGTTGGGCGTGGTGGGGTGGTaGATAATCTTGATTCCGGCTGGAAATTTGCAAGAG | + |
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Preference number: 6 (lower is better) Translates to: MATTCVLGVVGW*IILIPAGNLQE Trigger: CTCTTGCAAATTTCCAGCCGGAATCAAGATTATCAACCACCCCACCACGCCCAACACACAAGTGGTGGCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073316.13 ENSMUST00000112148.4 |
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| CDS TCA 72 bp | TCATCTTTCGCCGTGCGCCCAGTGGGATTTCAGTTTTaGTGGTCACATTTCTATGGAGCTCAGGATTGGGTC | + |
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Preference number: 6 (lower is better) Translates to: SSFAVRPVGFQF*WSHFYGAQDWV Trigger: GACCCAATCCTGAGCTCCATAGAAATGTGACCATCAAAACTGAAATCCCACTGGGCGCACGGCGAAAGATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073316.13 ENSMUST00000112148.4 ENSMUST00000203040.3 ENSMUST00000203258.2 |
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| CDS CAA 72 bp | ACTTGTGTGTTGGGCGTGGTGGGGTGGTTGATAATCTaGATTCCGGCTGGAAATTTGCAAGAGCTGGACTCT | + |
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Preference number: 6 (lower is better) Translates to: TCVLGVVGWLII*IPAGNLQELDS Trigger: AGAGTCCAGCTCTTGCAAATTTCCAGCCGGAATCAAGATTATCAACCACCCCACCACGCCCAACACACAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073316.13 ENSMUST00000112148.4 |
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| CDS CAA 72 bp | TCCTCCAGGCCAGGGAAACTGATGTCTAGAAGGATCTaGCTGAGGCTATCATTCATTGTGTCCAGGACAAGG | + |
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Preference number: 6 (lower is better) Translates to: SSRPGKLMSRRI*LRLSFIVSRTR Trigger: CCTTGTCCTGGACACAATGAATGATAGCCTCAGCAAGATCCTTCTAGACATCAGTTTCCCTGGCCTGGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073316.13 ENSMUST00000112148.4 |
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| CDS GCA 72 bp | GATTGGCACTTGGGTGAATGGTCCAGAAGGAGACCTTaGCATTGGCAGATGTCTCTCGAACAAACATGTCAT | + |
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Preference number: 6 (lower is better) Translates to: DWHLGEWSRRRP*HWQMSLEQTCH Trigger: ATGACATGTTTGTTCGAGAGACATCTGCCAATGGCAAGGTCTCCTTCTGGACCATTCACCCAAGTGCCAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000073316.13 ENSMUST00000112148.4 ENSMUST00000203040.3 ENSMUST00000203258.2 |
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| CDS CAA 72 bp | TCAGTTTTGATGGTCACATTTCTATGGAGCTCAGGATaGGGTCGTTTCTGCTGTGATTCCAAGTGCTCGGGC | + |
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Preference number: 6 (lower is better) Translates to: SVLMVTFLWSSG*GRFCCDSKCSG Trigger: GCCCGAGCACTTGGAATCACAGCAGAAACGACCCAATCCTGAGCTCCATAGAAATGTGACCATCAAAACTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073316.13 |
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| CDS CAA 72 bp | TTCATCTTTCGCCGTGCGCCCAGTGGGATTTCAGTTTaGATGGTCACATTTCTATGGAGCTCAGGATTGGGT | + |
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Preference number: 6 (lower is better) Translates to: FIFRRAPSGISV*MVTFLWSSGLG Trigger: ACCCAATCCTGAGCTCCATAGAAATGTGACCATCAAAACTGAAATCCCACTGGGCGCACGGCGAAAGATGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000073316.13 ENSMUST00000112148.4 ENSMUST00000203040.3 ENSMUST00000203258.2 |
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| CDS CAA 90 bp | AGTGGGATTTCAGTTTTGATGGTCACATTTCTATGGAGCTCAGGATaGGGTCGTTTCTGCTGCTGTGATTCCAAGTGCTCGGGCGATTGT | + |
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Preference number: 6 (lower is better) Translates to: SGISVLMVTFLWSSG*GRFCCCDSKCSGDC Trigger: ACAATCGCCCGAGCACTTGGAATCACAGCAGCAGAAACGACCCAATCCTGAGCTCCATAGAAATGTGACCATCAAAACTGAAATCCCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203040.3 |
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| CDS CAA 72 bp | TCAGTTTTGATGGTCACATTTCTATGGAGCTCAGGATaGGGTCGTTTCTGCTGCTGTGATTCCAAGTGCTCG | + |
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Preference number: 6 (lower is better) Translates to: SVLMVTFLWSSG*GRFCCCDSKCS Trigger: CGAGCACTTGGAATCACAGCAGCAGAAACGACCCAATCCTGAGCTCCATAGAAATGTGACCATCAAAACTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203040.3 |
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| CDS CAA 72 bp | TCAGTTTTGATGGTCACATTTCTATGGAGCTCAGGATaGGGTCGTTTCTGCTGCTGCTTAAACACTTGGTCC | + |
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Preference number: 6 (lower is better) Translates to: SVLMVTFLWSSG*GRFCCCLNTWS Trigger: GGACCAAGTGTTTAAGCAGCAGCAGAAACGACCCAATCCTGAGCTCCATAGAAATGTGACCATCAAAACTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203258.2 |
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| CDS CAA 90 bp | AGTGGGATTTCAGTTTTGATGGTCACATTTCTATGGAGCTCAGGATaGGGTCGTTTCTGCTGCTGCTTAAACACTTGGTCCAATGTCAAG | + |
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Preference number: 6 (lower is better) Translates to: SGISVLMVTFLWSSG*GRFCCCLNTWSNVK Trigger: CTTGACATTGGACCAAGTGTTTAAGCAGCAGCAGAAACGACCCAATCCTGAGCTCCATAGAAATGTGACCATCAAAACTGAAATCCCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203258.2 |
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| CDS CAA 72 bp | TCAGTTTTGATGGTCACATTTCTATGGAGCTCAGGATaGGGTCGTTTCTGCTGCTTAAACACTTGGTCCAAT | + |
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Preference number: 6 (lower is better) Translates to: SVLMVTFLWSSG*GRFCCLNTWSN Trigger: ATTGGACCAAGTGTTTAAGCAGCAGAAACGACCCAATCCTGAGCTCCATAGAAATGTGACCATCAAAACTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112148.4 |
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