Pregenerated sensors for FOXL3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000094504

Ensembl transcript IDs: ENSMUST00000179205.2

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	CCTCCTCGCGCTTGGGGCCGCGTCTCCTGCGTCGCCGACGGAAGTTaGCGTTCTCGAAAAGGTCCAGGAGGGACTCGCAGCCGCCCGCGA	+
Preference number: 5 (lower is better) Translates to: PPRAWGRVSCVADGS*RSRKGPGGTRSRPR Trigger: TCGCGGGCGGCTGCGAGTCCCTCCTGGACCTTTTCGAGAACGGCAACTTCCGTCGGCGACGCAGGAGACGCGGCCCCAAGCGCGAGGAGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179205.2
CDS TCA 90 bp	GTTCCAGAGCCGGGTACCTGGCTTCCTGCGAGTGACAGGATGACCTaGGAGTTGGGAAAGGGTCCGGGGAAGATAGGATGTAGTCAATGC	+
Preference number: 5 (lower is better) Translates to: VPEPGTWLPASDRMT*ELGKGPGKIGCSQC Trigger: GCATTGACTACATCCTATCTTCCCCGGACCCTTTCCCAACTCTCAGGTCATCCTGTCACTCGCAGGAAGCCAGGTACCCGGCTCTGGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179205.2
CDS CAA 90 bp	GCCTCCTCGCGCTTGGGGCCGCGTCTCCTGCGTCGCCGACGGAAGTaGCCGTTCTCGAAAAGGTCCAGGAGGGACTCGCAGCCGCCCGCG	+
Preference number: 6 (lower is better) Translates to: ASSRLGPRLLRRRRK*PFSKRSRRDSQPPA Trigger: CGCGGGCGGCTGCGAGTCCCTCCTGGACCTTTTCGAGAACGGCAACTTCCGTCGGCGACGCAGGAGACGCGGCCCCAAGCGCGAGGAGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179205.2
CDS GCA 72 bp	GGAGGGACTCGCAGCCGCCCGCGAACGTCCAGTAGTTaGCTTTGCCCTTGTCGTTGCCCTCGGTCCGTGGCA	+
Preference number: 6 (lower is better) Translates to: GGTRSRPRTSSS*LCPCRCPRSVA Trigger: TGCCACGGACCGAGGGCAACGACAAGGGCAAAGGCAACTACTGGACGTTCGCGGGCGGCTGCGAGTCCCTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179205.2
CDS TCA 72 bp	CCGGGTACCTGGCTTCCTGCGAGTGACAGGATGACCTaGGAGTTGGGAAAGGGTCCGGGGAAGATAGGATGT	+
Preference number: 6 (lower is better) Translates to: PGTWLPASDRMT*ELGKGPGKIGC Trigger: ACATCCTATCTTCCCCGGACCCTTTCCCAACTCTCAGGTCATCCTGTCACTCGCAGGAAGCCAGGTACCCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179205.2
CDS TCA 72 bp	CGGAGCTGCCGGCAGGGTAGTCGTCAGCGTCGTCATTaGAGCAGTTATAGGGATACTGTGAGCTGTCAAACA	+
Preference number: 6 (lower is better) Translates to: RSCRQGSRQRRH*SSYRDTVSCQT Trigger: TGTTTGACAGCTCACAGTATCCCTATAACTGCTTCAATGACGACGCTGACGACTACCCTGCCGGCAGCTCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179205.2

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