RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FOXK1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000056493

Ensembl transcript IDs: ENSMUST00000072837.7, ENSMUST00000198422.2

Found 306 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGTGCTCCAGGGTTGCCAGCCATGGGCCACACAGTGCGTGGACATaGCCCTCCTGGCTCAGAGCTTGTGGGAGCACGCTCTGGTGCCAG +
Preference number: 1 (lower is better)
Translates to: GCSRVASHGPHSAWT*PSWLRACGSTLWCQ
Trigger: CTGGCACCAGAGCGTGCTCCCACAAGCTCTGAGCCAGGAGGGCCATGTCCACGCACTGTGTGGCCCATGGCTGGCAACCCTGGAGCACCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR GCA 90 bp GGGCTTAGTGGGGTGCTCCAGGGTTGCCAGCCATGGGCCACACAGTaGGTGGACATGGCCCTCCTGGCTCAGAGCTTGTGGGAGCACGCT +
Preference number: 1 (lower is better)
Translates to: GLSGVLQGCQPWATQ*VDMALLAQSLWEHA
Trigger: AGCGTGCTCCCACAAGCTCTGAGCCAGGAGGGCCATGTCCACGCACTGTGTGGCCCATGGCTGGCAACCCTGGAGCACCCCACTAAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CCA 90 bp TTAGTGGGGTGCTCCAGGGTTGCCAGCCATGGGCCACACAGTGCGTaGACATGGCCCTCCTGGCTCAGAGCTTGTGGGAGCACGCTCTGG +
Preference number: 1 (lower is better)
Translates to: LVGCSRVASHGPHSA*TWPSWLRACGSTLW
Trigger: CCAGAGCGTGCTCCCACAAGCTCTGAGCCAGGAGGGCCATGTCCACGCACTGTGTGGCCCATGGCTGGCAACCCTGGAGCACCCCACTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CCA 90 bp CCCTTCGAGCATCCTCTGTCCTGCCTCGTGCCCAGATGGTACCTCTaGAGAAGGCATGCGGCTGGCCTCATCTGTGGGACAGGCCTGCCC +
Preference number: 1 (lower is better)
Translates to: PFEHPLSCLVPRWYL*RRHAAGLICGTGLP
Trigger: GGGCAGGCCTGTCCCACAGATGAGGCCAGCCGCATGCCTTCTCCAGAGGTACCATCTGGGCACGAGGCAGGACAGAGGATGCTCGAAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR GCA 90 bp GGGTGGGGGAGGAGACGGTGTGAGCAGATCACCGCCCAGATCCTCTaGTGTCTTCCTGCCGCATACCACCCACCATCCATCATCCTCCTG +
Preference number: 1 (lower is better)
Translates to: GWGRRRCEQITAQIL*CLPAAYHPPSIILL
Trigger: CAGGAGGATGATGGATGGTGGGTGGTATGCGGCAGGAAGACAGCAGAGGATCTGGGCGGTGATCTGCTCACACCGTCTCCTCCCCCACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR GCA 90 bp CCCCGCCCACCCGGCCCAGCAAGCCAAAGTCCCTGTCAGAGGGCCTaGTCTGAAGGGAAGTGGTGTCTGCAGTGGCAATCTTTGGAACAG +
Preference number: 1 (lower is better)
Translates to: PRPPGPASQSPCQRA*SEGKWCLQWQSLEQ
Trigger: CTGTTCCAAAGATTGCCACTGCAGACACCACTTCCCTTCAGAGCAGGCCCTCTGACAGGGACTTTGGCTTGCTGGGCCGGGTGGGCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR GCA 90 bp TCCTCTGTCCTGCCTCGTGCCCAGATGGTACCTCTGGAGAAGGCATaGGGCTGGCCTCATCTGTGGGACAGGCCTGCCCAGGCTGTTATG +
Preference number: 1 (lower is better)
Translates to: SSVLPRAQMVPLEKA*GWPHLWDRPAQAVM
Trigger: CATAACAGCCTGGGCAGGCCTGTCCCACAGATGAGGCCAGCCGCATGCCTTCTCCAGAGGTACCATCTGGGCACGAGGCAGGACAGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CCA 90 bp TGGGCCACACAGTGCGTGGACATGGCCCTCCTGGCTCAGAGCTTGTaGGAGCACGCTCTGGTGCCAGCTTCTGCCCAGCAGATGACCAAA +
Preference number: 1 (lower is better)
Translates to: WATQCVDMALLAQSL*EHALVPASAQQMTK
Trigger: TTTGGTCATCTGCTGGGCAGAAGCTGGCACCAGAGCGTGCTCCCACAAGCTCTGAGCCAGGAGGGCCATGTCCACGCACTGTGTGGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR TCA 90 bp TCTGACCGGCACCAGGCAGAGAAGGCGGCTGACTGGTGGGTGGTTTaGTACCAACGACAGGGCCTGGGGCTCTGTCCAAGTTGTTGCCAG +
Preference number: 1 (lower is better)
Translates to: SDRHQAEKAADWWVV*YQRQGLGLCPSCCQ
Trigger: CTGGCAACAACTTGGACAGAGCCCCAGGCCCTGTCGTTGGTATCAAACCACCCACCAGTCAGCCGCCTTCTCTGCCTGGTGCCGGTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CCA 90 bp CTCAGAGAGAGGAGCCTGGGTTTGCACTGTGCTTCTGTCCAGGCCTaGGGCTCAGGCTCTTGTTGTGGGCGCTGCCTGGGATCCATTCCT +
Preference number: 1 (lower is better)
Translates to: LRERSLGLHCASVQA*GSGSCCGRCLGSIP
Trigger: AGGAATGGATCCCAGGCAGCGCCCACAACAAGAGCCTGAGCCCCAGGCCTGGACAGAAGCACAGTGCAAACCCAGGCTCCTCTCTCTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CCA 90 bp CCTGCCGCATACCACCCACCATCCATCATCCTCCTGCTGAGCAAGTaGCTGACCGACTTCCCTTGCAGCTGGCTCAGGCTTCCCTGGAGA +
Preference number: 1 (lower is better)
Translates to: PAAYHPPSIILLLSK*LTDFPCSWLRLPWR
Trigger: TCTCCAGGGAAGCCTGAGCCAGCTGCAAGGGAAGTCGGTCAGCCACTTGCTCAGCAGGAGGATGATGGATGGTGGGTGGTATGCGGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CCA 90 bp GTTCACCAGGGCCTGGTGTGGTCGAGCGCAGGGCCTGGTGTTGCTTaGCTGCCTACAAAAGGGAACCTCAGAGACACATGGTCTGCTCTG +
Preference number: 1 (lower is better)
Translates to: VHQGLVWSSAGPGVA*LPTKGNLRDTWSAL
Trigger: CAGAGCAGACCATGTGTCTCTGAGGTTCCCTTTTGTAGGCAGCCAAGCAACACCAGGCCCTGCGCTCGACCACACCAGGCCCTGGTGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CCA 90 bp TCTTGGAGTTATCAGGGAGAGCGGCATGTTCACCAGGGCCTGGTGTaGTCGAGCGCAGGGCCTGGTGTTGCTTGGCTGCCTACAAAAGGG +
Preference number: 1 (lower is better)
Translates to: SWSYQGERHVHQGLV*SSAGPGVAWLPTKG
Trigger: CCCTTTTGTAGGCAGCCAAGCAACACCAGGCCCTGCGCTCGACCACACCAGGCCCTGGTGAACATGCCGCTCTCCCTGATAACTCCAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CCA 90 bp CCTCTTCTGACCGGCACCAGGCAGAGAAGGCGGCTGACTGGTGGGTaGTTTGATACCAACGACAGGGCCTGGGGCTCTGTCCAAGTTGTT +
Preference number: 1 (lower is better)
Translates to: PLLTGTRQRRRLTGG*FDTNDRAWGSVQVV
Trigger: AACAACTTGGACAGAGCCCCAGGCCCTGTCGTTGGTATCAAACCACCCACCAGTCAGCCGCCTTCTCTGCCTGGTGCCGGTCAGAAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CCA 90 bp ATCCATCCCGGTCATCTGCTCTCCTGTGACCACAGCCTCCAGGTCTaGAGTCCCTTCCAGCAAAGGCAGCTTGTCCAGCCTGCTCTCTGC +
Preference number: 1 (lower is better)
Translates to: IHPGHLLSCDHSLQV*SPFQQRQLVQPALC
Trigger: GCAGAGAGCAGGCTGGACAAGCTGCCTTTGCTGGAAGGGACTCCAGACCTGGAGGCTGTGGTCACAGGAGAGCAGATGACCGGGATGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CCA 90 bp TTAGGGAGGGCAGAGAGAGAGAGAGACGTGCCATATGCCAGTCTGTaGGGGCACCTAGGCCACACCCTGCTGTGTCACCAGTGTAGCAGC +
Preference number: 1 (lower is better)
Translates to: LGRAERERDVPYASL*GHLGHTLLCHQCSS
Trigger: GCTGCTACACTGGTGACACAGCAGGGTGTGGCCTAGGTGCCCCCACAGACTGGCATATGGCACGTCTCTCTCTCTCTCTGCCCTCCCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CCA 90 bp ACAGACAGACAGACAGACTCCTCACTGAGGGATCTTTACCACTGCTaGCTCGGCACCAGCTGTGAGGGCAGCCCTCAGCCTCCAGTCCCA +
Preference number: 1 (lower is better)
Translates to: TDRQTDSSLRDLYHC*LGTSCEGSPQPPVP
Trigger: TGGGACTGGAGGCTGAGGGCTGCCCTCACAGCTGGTGCCGAGCCAGCAGTGGTAAAGATCCCTCAGTGAGGAGTCTGTCTGTCTGTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR GCA 90 bp GCAGCAGCCATACATCGGAGCTTGGACTTATCCATCCCGGTCATCTaGTCTCCTGTGACCACAGCCTCCAGGTCTGGAGTCCCTTCCAGC +
Preference number: 1 (lower is better)
Translates to: AAAIHRSLDLSIPVI*SPVTTASRSGVPSS
Trigger: GCTGGAAGGGACTCCAGACCTGGAGGCTGTGGTCACAGGAGAGCAGATGACCGGGATGGATAAGTCCAAGCTCCGATGTATGGCTGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CCA 90 bp ATCCTTCTTGGAGTTATCAGGGAGAGCGGCATGTTCACCAGGGCCTaGTGTGGTCGAGCGCAGGGCCTGGTGTTGCTTGGCTGCCTACAA +
Preference number: 1 (lower is better)
Translates to: ILLGVIRESGMFTRA*CGRAQGLVLLGCLQ
Trigger: TTGTAGGCAGCCAAGCAACACCAGGCCCTGCGCTCGACCACACCAGGCCCTGGTGAACATGCCGCTCTCCCTGATAACTCCAAGAAGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR GCA 90 bp CCATCCATCATCCTCCTGCTGAGCAAGTGGCTGACCGACTTCCCTTaGAGCTGGCTCAGGCTTCCCTGGAGATCCGTTTGTAGCTTGCAG +
Preference number: 1 (lower is better)
Translates to: PSIILLLSKWLTDFP*SWLRLPWRSVCSLQ
Trigger: CTGCAAGCTACAAACGGATCTCCAGGGAAGCCTGAGCCAGCTGCAAGGGAAGTCGGTCAGCCACTTGCTCAGCAGGAGGATGATGGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CCA 90 bp ATCATCCTCCTGCTGAGCAAGTGGCTGACCGACTTCCCTTGCAGCTaGCTCAGGCTTCCCTGGAGATCCGTTTGTAGCTTGCAGCTCTCG +
Preference number: 1 (lower is better)
Translates to: IILLLSKWLTDFPCS*LRLPWRSVCSLQLS
Trigger: CGAGAGCTGCAAGCTACAAACGGATCTCCAGGGAAGCCTGAGCCAGCTGCAAGGGAAGTCGGTCAGCCACTTGCTCAGCAGGAGGATGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR TCA 90 bp TTGCAGCTCTCGACTCATTCAGTGCTGTGGGCACTGGCCCTGGGCTaGCTTTCAACCCAGAGCTCTTTGATCCATCAATGTGGGAGCCGC +
Preference number: 1 (lower is better)
Translates to: LQLSTHSVLWALALG*LSTQSSLIHQCGSR
Trigger: GCGGCTCCCACATTGATGGATCAAAGAGCTCTGGGTTGAAAGTCAGCCCAGGGCCAGTGCCCACAGCACTGAATGAGTCGAGAGCTGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR TCA 90 bp TACATCGGAGCTTGGACTTATCCATCCCGGTCATCTGCTCTCCTGTaGCCACAGCCTCCAGGTCTGGAGTCCCTTCCAGCAAAGGCAGCT +
Preference number: 1 (lower is better)
Translates to: YIGAWTYPSRSSALL*PQPPGLESLPAKAA
Trigger: AGCTGCCTTTGCTGGAAGGGACTCCAGACCTGGAGGCTGTGGTCACAGGAGAGCAGATGACCGGGATGGATAAGTCCAAGCTCCGATGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR GCA 90 bp AATAGGAAATCCGTGGACCCACTCTCAGAGAGAGGAGCCTGGGTTTaGACTGTGCTTCTGTCCAGGCCTGGGGCTCAGGCTCTTGTTGTG +
Preference number: 1 (lower is better)
Translates to: NRKSVDPLSERGAWV*TVLLSRPGAQALVV
Trigger: CACAACAAGAGCCTGAGCCCCAGGCCTGGACAGAAGCACAGTGCAAACCCAGGCTCCTCTCTCTGAGAGTGGGTCCACGGATTTCCTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR GCA 90 bp GTAGAGCTGAGGCCTGATAGAGGGAACCTTGGAGCAGTGAGGCAATaGAGAGGAGCAGCCAGGACCACTCAGGGGGCTTTTGTTCTTCAC +
Preference number: 1 (lower is better)
Translates to: VELRPDRGNLGAVRQ*RGAARTTQGAFVLH
Trigger: GTGAAGAACAAAAGCCCCCTGAGTGGTCCTGGCTGCTCCTCTGCATTGCCTCACTGCTCCAAGGTTCCCTCTATCAGGCCTCAGCTCTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CCA 90 bp GTCACAAATAGGAAATCCGTGGACCCACTCTCAGAGAGAGGAGCCTaGGTTTGCACTGTGCTTCTGTCCAGGCCTGGGGCTCAGGCTCTT +
Preference number: 1 (lower is better)
Translates to: VTNRKSVDPLSERGA*VCTVLLSRPGAQAL
Trigger: AAGAGCCTGAGCCCCAGGCCTGGACAGAAGCACAGTGCAAACCCAGGCTCCTCTCTCTGAGAGTGGGTCCACGGATTTCCTATTTGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CCA 90 bp GGCCCTGGGCTGACTTTCAACCCAGAGCTCTTTGATCCATCAATGTaGGAGCCGCCCATCCTTCTTGGAGTTATCAGGGAGAGCGGCATG +
Preference number: 1 (lower is better)
Translates to: GPGLTFNPELFDPSM*EPPILLGVIRESGM
Trigger: CATGCCGCTCTCCCTGATAACTCCAAGAAGGATGGGCGGCTCCCACATTGATGGATCAAAGAGCTCTGGGTTGAAAGTCAGCCCAGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR GCA 90 bp TCTCTCTCTCCATACCCTTCCACGCCCCTGTTAATGGTGAAGATCTaGCTCAGAGCACGGAGCCCACGTTTCAGGAACTGGGACAGCAAC +
Preference number: 1 (lower is better)
Translates to: SLSPYPSTPLLMVKI*LRARSPRFRNWDSN
Trigger: GTTGCTGTCCCAGTTCCTGAAACGTGGGCTCCGTGCTCTGAGGCAGATCTTCACCATTAACAGGGGCGTGGAAGGGTATGGAGAGAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CCA 90 bp TGTAGGCCATCACCCCAGAAATTCAGGAAGCTGAGGCAAGAGGACTaGGAGTTCAAGGCCAGCCTGGGCAGCTTTGTGAGTCCCATCTCA +
Preference number: 1 (lower is better)
Translates to: CRPSPQKFRKLRQED*EFKASLGSFVSPIS
Trigger: TGAGATGGGACTCACAAAGCTGCCCAGGCTGGCCTTGAACTCCCAGTCCTCTTGCCTCAGCTTCCTGAATTTCTGGGGTGATGGCCTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CCA 90 bp CAGCTGACACCCACGCTTTGGTTCTTGCTGCACTGTACTCAAACTTaGCACCGACTGCTGTCCGGAGAGGTAGTTTCCTTTCCAGAGGAT +
Preference number: 1 (lower is better)
Translates to: QLTPTLWFLLHCTQT*HRLLSGEVVSFPED
Trigger: ATCCTCTGGAAAGGAAACTACCTCTCCGGACAGCAGTCGGTGCCAAGTTTGAGTACAGTGCAGCAAGAACCAAAGCGTGGGTGTCAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CCA 90 bp AGACCTCCAAAACACTGGCTTGAAGCCGAGTACTACAGAAATGACTaGCTGGGGAGCTTGGGAGATAGCTCAAGAGAGGAGGCAGGTGCT +
Preference number: 1 (lower is better)
Translates to: RPPKHWLEAEYYRND*LGSLGDSSREEAGA
Trigger: AGCACCTGCCTCCTCTCTTGAGCTATCTCCCAAGCTCCCCAGCCAGTCATTTCTGTAGTACTCGGCTTCAAGCCAGTGTTTTGGAGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CCA 90 bp CACCCTGAGTTCATGAGAACTCCCAAGATGAAAGGGGGCATTAAATaGGGAGCAGGACTGAAGCAGCAGGCAGAAGGCCTCTGTTCTCTG +
Preference number: 1 (lower is better)
Translates to: HPEFMRTPKMKGGIK*GAGLKQQAEGLCSL
Trigger: CAGAGAACAGAGGCCTTCTGCCTGCTGCTTCAGTCCTGCTCCCCATTTAATGCCCCCTTTCATCTTGGGAGTTCTCATGAACTCAGGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CCA 90 bp AGGTGCCATTTGGATACATACAGGACAGAGAACATGAACATTCAGTaGGTCACGGAGCTCAGAGTCAGCCAGTCCCAGGGACACAGGGGA +
Preference number: 1 (lower is better)
Translates to: RCHLDTYRTENMNIQ*VTELRVSQSQGHRG
Trigger: TCCCCTGTGTCCCTGGGACTGGCTGACTCTGAGCTCCGTGACCCACTGAATGTTCATGTTCTCTGTCCTGTATGTATCCAAATGGCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR TCA 90 bp CTCAGAAGCCAAGGTGCCATTTGGATACATACAGGACAGAGAACATaGACATTCAGTGGGTCACGGAGCTCAGAGTCAGCCAGTCCCAGG +
Preference number: 1 (lower is better)
Translates to: LRSQGAIWIHTGQRT*TFSGSRSSESASPR
Trigger: CCTGGGACTGGCTGACTCTGAGCTCCGTGACCCACTGAATGTTCATGTTCTCTGTCCTGTATGTATCCAAATGGCACCTTGGCTTCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CCA 90 bp ACCGACCACCCTCTAGGAGGACCAACACTGAGTTTCTGGCTGCTTTaGAGTTTCCTGTCGCACAGCCCCCATGACTGCTTCTATAAAATC +
Preference number: 1 (lower is better)
Translates to: TDHPLGGPTLSFWLL*SFLSHSPHDCFYKI
Trigger: GATTTTATAGAAGCAGTCATGGGGGCTGTGCGACAGGAAACTCCAAAGCAGCCAGAAACTCAGTGTTGGTCCTCCTAGAGGGTGGTCGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CCA 90 bp CCAGCAAGCCAAAGTCCCTGTCAGAGGGCCTGCTCTGAAGGGAAGTaGTGTCTGCAGTGGCAATCTTTGGAACAGCTTGACTTATCCTTT +
Preference number: 1 (lower is better)
Translates to: PASQSPCQRACSEGK*CLQWQSLEQLDLSF
Trigger: AAAGGATAAGTCAAGCTGTTCCAAAGATTGCCACTGCAGACACCACTTCCCTTCAGAGCAGGCCCTCTGACAGGGACTTTGGCTTGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR TCA 90 bp GGATGGGGAGGGAGGGACTGGGCGAGCAATGTCACGTGGGTGTTATaGAATTTGAGGATTTTGAGGAAGAACAGGAACAATCCACCCGTT +
Preference number: 1 (lower is better)
Translates to: GWGGRDWASNVTWVL*NLRILRKNRNNPPV
Trigger: AACGGGTGGATTGTTCCTGTTCTTCCTCAAAATCCTCAAATTTCATAACACCCACGTGACATTGCTCGCCCAGTCCCTCCCTCCCCATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CCA 90 bp CTGTTTTCTGGTCTATTCCCGGATCAGTCACAAATAGGAAATCCGTaGACCCACTCTCAGAGAGAGGAGCCTGGGTTTGCACTGTGCTTC +
Preference number: 1 (lower is better)
Translates to: LFSGLFPDQSQIGNP*THSQREEPGFALCF
Trigger: GAAGCACAGTGCAAACCCAGGCTCCTCTCTCTGAGAGTGGGTCCACGGATTTCCTATTTGTGACTGATCCGGGAATAGACCAGAAAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CCA 90 bp TTCTCTGAACCTTTCCAGGCAATAGGCAGGAGACCTCCAAAACACTaGCTTGAAGCCGAGTACTACAGAAATGACTGGCTGGGGAGCTTG +
Preference number: 1 (lower is better)
Translates to: FSEPFQAIGRRPPKH*LEAEYYRNDWLGSL
Trigger: CAAGCTCCCCAGCCAGTCATTTCTGTAGTACTCGGCTTCAAGCCAGTGTTTTGGAGGTCTCCTGCCTATTGCCTGGAAAGGTTCAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR TCA 90 bp TCTGTGTGTCTCAGGTTGGAGATGAGCCCAGATTCCATATTTAGCTaGAAGAAATATTTAGGGTCCAAAGCCAAAGCAGATCTCCCTGAC +
Preference number: 1 (lower is better)
Translates to: SVCLRLEMSPDSIFS*KKYLGSKAKADLPD
Trigger: GTCAGGGAGATCTGCTTTGGCTTTGGACCCTAAATATTTCTTTCAGCTAAATATGGAATCTGGGCTCATCTCCAACCTGAGACACACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR GCA 90 bp AGTTTCTGGCTGCTTTGGAGTTTCCTGTCGCACAGCCCCCATGACTaGTTCTATAAAATCAACTCTCATTCTCACAGAGAGAAACATTTG +
Preference number: 1 (lower is better)
Translates to: SFWLLWSFLSHSPHD*FYKINSHSHREKHL
Trigger: CAAATGTTTCTCTCTGTGAGAATGAGAGTTGATTTTATAGAAGCAGTCATGGGGGCTGTGCGACAGGAAACTCCAAAGCAGCCAGAAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR TCA 90 bp ACTGCTTCTATAAAATCAACTCTCATTCTCACAGAGAGAAACATTTaGTGGCTCCTGCTCACGAGACTTGGTGTGGTGTATGTTAAAGTG +
Preference number: 1 (lower is better)
Translates to: TASIKSTLILTERNI*WLLLTRLGVVYVKV
Trigger: CACTTTAACATACACCACACCAAGTCTCGTGAGCAGGAGCCATCAAATGTTTCTCTCTGTGAGAATGAGAGTTGATTTTATAGAAGCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CAA 90 bp CCATGGGCCACACAGTGCGTGGACATGGCCCTCCTGGCTCAGAGCTaGTGGGAGCACGCTCTGGTGCCAGCTTCTGCCCAGCAGATGACC +
Preference number: 2 (lower is better)
Translates to: PWATQCVDMALLAQS*WEHALVPASAQQMT
Trigger: GGTCATCTGCTGGGCAGAAGCTGGCACCAGAGCGTGCTCCCACAAGCTCTGAGCCAGGAGGGCCATGTCCACGCACTGTGTGGCCCATGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR TCA 90 bp TCTAAGCAGGCACTGTGCAGTTCGGATGGGGAGGGAGGGACTGGGCGAGCAATGCGGCGGCCACCCACATaGGGGCTGCAGGCTGTGATG +
Preference number: 2 (lower is better)
Translates to: SKQALCSSDGEGGTGRAMRRPPT*GLQAVM
Trigger: CATCACAGCCTGCAGCCCTCATGTGGGTGGCCGCCG...CATTGCTCGCCCAGTCCCTCCCTCCCCATCCGAACTGCACAGTGCCTGCTTAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CAA 90 bp GTGACCACAGCCTCCAGGTCTGGAGTCCCTTCCAGCAAAGGCAGCTaGTCCAGCCTGCTCTCTGCCCACAGGGCCCTTGGGCCTCTTCTG +
Preference number: 2 (lower is better)
Translates to: VTTASRSGVPSSKGS*SSLLSAHRALGPLL
Trigger: CAGAAGAGGCCCAAGGGCCCTGTGGGCAGAGAGCAGGCTGGACAAGCTGCCTTTGCTGGAAGGGACTCCAGACCTGGAGGCTGTGGTCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR CCA 90 bp TGGGTCCGCAGGCCTTTCTTACCCCTGCCTCCAGAGTGGGACCTTCGCTCACTGTGTGGGAGCACGCTCTaGTGCCAGCTTCTGCCCAGC +
Preference number: 2 (lower is better)
Translates to: WVRRPFLPLPPEWDLRSLCGSTL*CQLLPS
Trigger: GCTGGGCAGAAGCTGGCACCAGAGCGTGCTCCCACA...CAGTGAGCGAAGGTCCCACTCTGGAGGCAGGGGTAAGAAAGGCCTGCGGACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR CCA 90 bp GCAGCAGGCAGAAGGCCTCTGTTCTCTGCCCCGCCCACCCGGCCCAGCAAGCCATGCTCTGAAGGGAAGTaGTGTCTGCAGTGGCAATCT +
Preference number: 2 (lower is better)
Translates to: AAGRRPLFSAPPTRPSKPCSEGK*CLQWQS
Trigger: AGATTGCCACTGCAGACACCACTTCCCTTCAGAGCA...TGGCTTGCTGGGCCGGGTGGGCGGGGCAGAGAACAGAGGCCTTCTGCCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR TCA 90 bp TGGGTCCGCAGGCCTTTCTTACCCCTGCCTCCAGAGTGGGACCTTCGCTCACTGTCATCTGCTCTCCTGTaGCCACAGCCTCCAGGTCTG +
Preference number: 2 (lower is better)
Translates to: WVRRPFLPLPPEWDLRSLSSALL*PQPPGL
Trigger: CAGACCTGGAGGCTGTGGTCACAGGAGAGCAGATGA...CAGTGAGCGAAGGTCCCACTCTGGAGGCAGGGGTAAGAAAGGCCTGCGGACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR GCA 90 bp CAGGTCTGGAGTCCCTTCCAGCAAAGGCAGCTTGTCCAGCCTGCTCTCTGCCCACTGACCGACTTCCCTTaGAGCTGGCTCAGGCTTCCC +
Preference number: 2 (lower is better)
Translates to: QVWSPFQQRQLVQPALCPLTDFP*SWLRLP
Trigger: GGGAAGCCTGAGCCAGCTGCAAGGGAAGTCGGTCAG...TGGGCAGAGAGCAGGCTGGACAAGCTGCCTTTGCTGGAAGGGACTCCAGACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR CCA 90 bp TGGGTCCGCAGGCCTTTCTTACCCCTGCCTCCAGAGTGGGACCTTCGCTCACTGCTCCTGCTGAGCAAGTaGCTGACCGACTTCCCTTGC +
Preference number: 2 (lower is better)
Translates to: WVRRPFLPLPPEWDLRSLLLLSK*LTDFPC
Trigger: GCAAGGGAAGTCGGTCAGCCACTTGCTCAGCAGGAG...CAGTGAGCGAAGGTCCCACTCTGGAGGCAGGGGTAAGAAAGGCCTGCGGACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR TCA 90 bp ATGGGCCACACAGTGCGTGGACATGGCCCTCCTGGCTCAGAGCTTGTGGGAGCACGAGTACTACAGAAATaGCTGGCTGGGGAGCTTGGG +
Preference number: 2 (lower is better)
Translates to: MGHTVRGHGPPGSELVGARVLQK*LAGELG
Trigger: CCCAAGCTCCCCAGCCAGTCATTTCTGTAGTACTCG...TGCTCCCACAAGCTCTGAGCCAGGAGGGCCATGTCCACGCACTGTGTGGCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR TCA 90 bp TGGGTCCGCAGGCCTTTCTTACCCCTGCCTCCAGAGTGGGACCTTCGCTCACTGTGTGGCCATTTGTGGTaGCTTTGCCTCTCCTGGCCA +
Preference number: 2 (lower is better)
Translates to: WVRRPFLPLPPEWDLRSLCGHLW*LCLSWP
Trigger: TGGCCAGGAGAGGCAAAGTCACCACAAATGGCCACA...CAGTGAGCGAAGGTCCCACTCTGGAGGCAGGGGTAAGAAAGGCCTGCGGACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR CCA 90 bp AGAAAGACTGACGAGCCCAGGCCGGCTTCCTGCCTCATCCTTCGTGAGATCCTGGGACAGGAGTGTCCATaGTGCCTGGCTCTCCGCTCT +
Preference number: 2 (lower is better)
Translates to: RKTDEPRPASCLILREILGQECP*CLALRS
Trigger: AGAGCGGAGAGCCAGGCACCATGGACACTCCTGTCC...CAGGATCTCACGAAGGATGAGGCAGGAAGCCGGCCTGGGCTCGTCAGTCTTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000198422.2
3UTR CAA 90 bp TGTTCACCAGGGCCTGGTGTGGTCGAGCGCAGGGCCTGGTGTTGCTaGGCTGCCTACAAAAGGGAACCTCAGAGACACATGGTCTGCTCT +
Preference number: 2 (lower is better)
Translates to: CSPGPGVVERRAWCC*AAYKREPQRHMVCS
Trigger: AGAGCAGACCATGTGTCTCTGAGGTTCCCTTTTGTAGGCAGCCAAGCAACACCAGGCCCTGCGCTCGACCACACCAGGCCCTGGTGAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CAA 90 bp TTCCCCGGGCGTCCAAGTCCTCAGCTGACACCCACGCTTTGGTTCTaGCTGCACTGTACTCAAACTTGGCACCGACTGCTGTCCGGAGAG +
Preference number: 2 (lower is better)
Translates to: FPGRPSPQLTPTLWF*LHCTQTWHRLLSGE
Trigger: CTCTCCGGACAGCAGTCGGTGCCAAGTTTGAGTACAGTGCAGCAAGAACCAAAGCGTGGGTGTCAGCTGAGGACTTGGACGCCCGGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR TCA 90 bp CAGGTCTGGAGTCCCTTCCAGCAAAGGCAGCTTGTCCAGCCTGCTCTCTGCCCAGTCCAAGTCCTCAGCTaGCACCCACGCTTTGGTTCT +
Preference number: 2 (lower is better)
Translates to: QVWSPFQQRQLVQPALCPVQVLS*HPRFGS
Trigger: AGAACCAAAGCGTGGGTGTCAGCTGAGGACTTGGAC...TGGGCAGAGAGCAGGCTGGACAAGCTGCCTTTGCTGGAAGGGACTCCAGACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR GCA 90 bp GTTAATGGTGAAGATCTGCCTCAGAGCACGGAGCCCACGTTTCAGGAACTGGGAGCAGCTTGTCCAGCCTaGTCTCTGCCCACAGGGCCC +
Preference number: 2 (lower is better)
Translates to: VNGEDLPQSTEPTFQELGAACPA*SLPTGP
Trigger: GGGCCCTGTGGGCAGAGAGCAGGCTGGACAAGCTGC...TCCCAGTTCCTGAAACGTGGGCTCCGTGCTCTGAGGCAGATCTTCACCATTAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR CCA 90 bp CCTGTGACCACAGCCTCCAGGTCTGGAGTCCCTTCCAGCAAAGGCAGCTTGTCCACCAACGACAGGGCCTaGGGCTCTGTCCAAGTTGTT +
Preference number: 2 (lower is better)
Translates to: PVTTASRSGVPSSKGSLSTNDRA*GSVQVV
Trigger: AACAACTTGGACAGAGCCCCAGGCCCTGTCGTTGGT...GGACAAGCTGCCTTTGCTGGAAGGGACTCCAGACCTGGAGGCTGTGGTCACAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR CCA 90 bp CAGGTCTGGAGTCCCTTCCAGCAAAGGCAGCTTGTCCAGCCTGCTCTCTGCCCACGGCTGACTGGTGGGTaGTTTGATACCAACGACAGG +
Preference number: 2 (lower is better)
Translates to: QVWSPFQQRQLVQPALCPRLTGG*FDTNDR
Trigger: CCTGTCGTTGGTATCAAACCACCCACCAGTCAGCCG...TGGGCAGAGAGCAGGCTGGACAAGCTGCCTTTGCTGGAAGGGACTCCAGACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CAA 90 bp GGTGGTTTGATACCAACGACAGGGCCTGGGGCTCTGTCCAAGTTGTaGCCAGCTGCTTACCGACCACCCTCTAGGAGGACCAACACTGAG +
Preference number: 2 (lower is better)
Translates to: GGLIPTTGPGALSKL*PAAYRPPSRRTNTE
Trigger: CTCAGTGTTGGTCCTCCTAGAGGGTGGTCGGTAAGCAGCTGGCAACAACTTGGACAGAGCCCCAGGCCCTGTCGTTGGTATCAAACCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CAA 90 bp GTGGGTGGTTTGATACCAACGACAGGGCCTGGGGCTCTGTCCAAGTaGTTGCCAGCTGCTTACCGACCACCCTCTAGGAGGACCAACACT +
Preference number: 2 (lower is better)
Translates to: VGGLIPTTGPGALSK*LPAAYRPPSRRTNT
Trigger: AGTGTTGGTCCTCCTAGAGGGTGGTCGGTAAGCAGCTGGCAACAACTTGGACAGAGCCCCAGGCCCTGTCGTTGGTATCAAACCACCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR TCA 90 bp ACCCCCACCACCTTTTCCCAGCCTAAGAATCAAGCTAAGGTATTATCAGGGATCGCTCGGCACCAGCTGTaGGGGCAGCCCTCAGCCTCC +
Preference number: 2 (lower is better)
Translates to: TPTTFSQPKNQAKVLSGIARHQL*GQPSAS
Trigger: GGAGGCTGAGGGCTGCCCTCACAGCTGGTGCCGAGC...GATCCCTGATAATACCTTAGCTTGATTCTTAGGCTGGGAAAAGGTGGTGGGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR GCA 90 bp TCTAAGCAGGCACTGTGCAGTTCGGATGGGGAGGGAGGGACTGGGCGAGCAATGCTCTGTCCAAGTTGTTaGCAGCTGCTTACCGACCAC +
Preference number: 2 (lower is better)
Translates to: SKQALCSSDGEGGTGRAMLCPSC*QLLTDH
Trigger: GTGGTCGGTAAGCAGCTGGCAACAACTTGGACAGAG...CATTGCTCGCCCAGTCCCTCCCTCCCCATCCGAACTGCACAGTGCCTGCTTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR GCA 90 bp CAGAGCACGGAGCCCACGTTTCAGGAACTGGGACAGCAACCTGCTCATGACCATTCCATCCCGGTCATCTaGTCTCCTGTGACCACAGCC +
Preference number: 2 (lower is better)
Translates to: QSTEPTFQELGQQPAHDHSIPVI*SPVTTA
Trigger: GGCTGTGGTCACAGGAGAGCAGATGACCGGGATGGA...ATGGTCATGAGCAGGTTGCTGTCCCAGTTCCTGAAACGTGGGCTCCGTGCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR CCA 90 bp TGGGTCCGCAGGCCTTTCTTACCCCTGCCTCCAGAGTGGGACCTTCGCTCACTGCCATACATCGGAGCTTaGACTTATCCATCCCGGTCA +
Preference number: 2 (lower is better)
Translates to: WVRRPFLPLPPEWDLRSLPYIGA*TYPSRS
Trigger: TGACCGGGATGGATAAGTCCAAGCTCCGATGTATGG...CAGTGAGCGAAGGTCCCACTCTGGAGGCAGGGGTAAGAAAGGCCTGCGGACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR CCA 90 bp TCTAAGCAGGCACTGTGCAGTTCGGATGGGGAGGGAGGGACTGGGCGAGCAATGCACTGGTGGCTTCAATaGCAGCAGCCATACATCGGA +
Preference number: 2 (lower is better)
Translates to: SKQALCSSDGEGGTGRAMHWWLQ*QQPYIG
Trigger: TCCGATGTATGGCTGCTGCCATTGAAGCCACCAGTG...CATTGCTCGCCCAGTCCCTCCCTCCCCATCCGAACTGCACAGTGCCTGCTTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR TCA 90 bp ATCACCCCAGAAATTCAGGAAGCTGAGGCAAGAGGACTGGGAGTTCAAGGCCAGGCACTGGCCCTGGGCTaGCTTTCAACCCAGAGCTCT +
Preference number: 2 (lower is better)
Translates to: ITPEIQEAEARGLGVQGQALALG*LSTQSS
Trigger: AGAGCTCTGGGTTGAAAGTCAGCCCAGGGCCAGTGC...CTGGCCTTGAACTCCCAGTCCTCTTGCCTCAGCTTCCTGAATTTCTGGGGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR TCA 90 bp TTAATGGTGAAGATCTGCCTCAGAGCACGGAGCCCACGTTTCAGGAACTGGGACATCTGCCTTGGAGGGTaGCCATGGACAGCCCTGGAG +
Preference number: 2 (lower is better)
Translates to: LMVKICLRARSPRFRNWDICLGG*PWTALE
Trigger: CTCCAGGGCTGTCCATGGTCACCCTCCAAGGCAGAT...GTCCCAGTTCCTGAAACGTGGGCTCCGTGCTCTGAGGCAGATCTTCACCATTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR GCA 90 bp ATCACCCCAGAAATTCAGGAAGCTGAGGCAAGAGGACTGGGAGTTCAAGGCCAGCCTGGGTTTGCACTGTaGTTCTGTCCAGGCCTGGGG +
Preference number: 2 (lower is better)
Translates to: ITPEIQEAEARGLGVQGQPGFAL*FCPGLG
Trigger: CCCCAGGCCTGGACAGAAGCACAGTGCAAACCCAGG...CTGGCCTTGAACTCCCAGTCCTCTTGCCTCAGCTTCCTGAATTTCTGGGGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR CCA 90 bp AGCTTGGACTTATCCATCCCGGTCATCTGCTCTCCTGTGACCACAGCCTCCAGGGGGTTCTCAGTTAACTaGAATGGGGGTGGGGTGGGT +
Preference number: 2 (lower is better)
Translates to: SLDLSIPVICSPVTTASRGFSVN*NGGGVG
Trigger: ACCCACCCCACCCCCATTCCAGTTAACTGAGAACCC...CCTGGAGGCTGTGGTCACAGGAGAGCAGATGACCGGGATGGATAAGTCCAAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR CCA 90 bp CTGCCTCAGAGCACGGAGCCCACGTTTCAGGAACTGGGACAGCAACCTGCTCATCACTGTACTCAAACTTaGCACCGACTGCTGTCCGGA +
Preference number: 2 (lower is better)
Translates to: LPQSTEPTFQELGQQPAHHCTQT*HRLLSG
Trigger: TCCGGACAGCAGTCGGTGCCAAGTTTGAGTACAGTG...ATGAGCAGGTTGCTGTCCCAGTTCCTGAAACGTGGGCTCCGTGCTCTGAGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR TCA 90 bp ATCACCCCAGAAATTCAGGAAGCTGAGGCAAGAGGACTGGGAGTTCAAGGCCAGGACTGGTGGGTGGTTTaGTACCAACGACAGGGCCTG +
Preference number: 2 (lower is better)
Translates to: ITPEIQEAEARGLGVQGQDWWVV*YQRQGL
Trigger: CAGGCCCTGTCGTTGGTATCAAACCACCCACCAGTC...CTGGCCTTGAACTCCCAGTCCTCTTGCCTCAGCTTCCTGAATTTCTGGGGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR GCA 90 bp CCCACACATGAGGGACCTTTCACTAGAGCTGAGACGCCACCCCTTTCTGACTTACGCAGGGCCTGGTGTTaGTTGGCTGCCTACAAAAGG +
Preference number: 2 (lower is better)
Translates to: PTHEGPFTRAETPPLSDLRRAWC*LAAYKR
Trigger: CCTTTTGTAGGCAGCCAAGCAACACCAGGCCCTGCG...TAAGTCAGAAAGGGGTGGCGTCTCAGCTCTAGTGAAAGGTCCCTCATGTGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR GCA 90 bp CCATCTCTGGAACTCGGATTCCCATCGTATTGGGTACCACTGCTTTTAAAGCACGGGGTGCTCCAGGGTTaGCAGCCATGGGCCACACAG +
Preference number: 2 (lower is better)
Translates to: PSLELGFPSYWVPLLLKHGVLQG*QPWATQ
Trigger: CTGTGTGGCCCATGGCTGGCAACCCTGGAGCACCCC...GTGCTTTAAAAGCAGTGGTACCCAATACGATGGGAATCCGAGTTCCAGAGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR CCA 90 bp TTTGATACCAACGACAGGGCCTGGGGCTCTGTCCAAGTTGTTGCCAGCTGCTTATGTGGGCACTGGCCCTaGGCTGACTTTCAACCCAGA +
Preference number: 2 (lower is better)
Translates to: FDTNDRAWGSVQVVASCLCGHWP*ADFQPR
Trigger: TCTGGGTTGAAAGTCAGCCCAGGGCCAGTGCCCACA...TAAGCAGCTGGCAACAACTTGGACAGAGCCCCAGGCCCTGTCGTTGGTATCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR CCA 90 bp TTAATGGTGAAGATCTGCCTCAGAGCACGGAGCCCACGTTTCAGGAACTGGGACGACTTCCCTTGCAGCTaGCTCAGGCTTCCCTGGAGA +
Preference number: 2 (lower is better)
Translates to: LMVKICLRARSPRFRNWDDFPCS*LRLPWR
Trigger: TCTCCAGGGAAGCCTGAGCCAGCTGCAAGGGAAGTC...GTCCCAGTTCCTGAAACGTGGGCTCCGTGCTCTGAGGCAGATCTTCACCATTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR CCA 90 bp CCACACATGAGGGACCTTTCACTAGAGCTGAGACGCCACCCCTTTCTGACTTATCTGGTCCCTGATGTGTaGGGGGCACTGGTGGCTTCA +
Preference number: 2 (lower is better)
Translates to: PHMRDLSLELRRHPFLTYLVPDV*GALVAS
Trigger: TGAAGCCACCAGTGCCCCCCACACATCAGGGACCAG...ATAAGTCAGAAAGGGGTGGCGTCTCAGCTCTAGTGAAAGGTCCCTCATGTGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR TCA 90 bp TGGGTCCGCAGGCCTTTCTTACCCCTGCCTCCAGAGTGGGACCTTCGCTCACTGCTTCTTACATTTCACTaGCCTTTAACCCCCACCTTA +
Preference number: 2 (lower is better)
Translates to: WVRRPFLPLPPEWDLRSLLLTFH*PLTPTL
Trigger: TAAGGTGGGGGTTAAAGGTCAGTGAAATGTAAGAAG...CAGTGAGCGAAGGTCCCACTCTGGAGGCAGGGGTAAGAAAGGCCTGCGGACCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR GCA 90 bp CCCACACATGAGGGACCTTTCACTAGAGCTGAGACGCCACCCCTTTCTGACTTAAGAGGAGCCTGGGTTTaGACTGTGCTTCTGTCCAGG +
Preference number: 2 (lower is better)
Translates to: PTHEGPFTRAETPPLSDLRGAWV*TVLLSR
Trigger: CCTGGACAGAAGCACAGTGCAAACCCAGGCTCCTCT...TAAGTCAGAAAGGGGTGGCGTCTCAGCTCTAGTGAAAGGTCCCTCATGTGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR GCA 90 bp CTGCCTCAGAGCACGGAGCCCACGTTTCAGGAACTGGGACAGCAACCTGCTCATCGCTTTGGTTCTTGCTaGACTGTACTCAAACTTGGC +
Preference number: 2 (lower is better)
Translates to: LPQSTEPTFQELGQQPAHRFGSC*TVLKLG
Trigger: GCCAAGTTTGAGTACAGTGCAGCAAGAACCAAAGCG...ATGAGCAGGTTGCTGTCCCAGTTCCTGAAACGTGGGCTCCGTGCTCTGAGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR GCA 90 bp ACCCCCACCACCTTTTCCCAGCCTAAGAATCAAGCTAAGGTATTATCAGGGATCCCATGGGCCACACAGTaGGTGGACATGGCCCTCCTG +
Preference number: 2 (lower is better)
Translates to: TPTTFSQPKNQAKVLSGIPWATQ*VDMALL
Trigger: CAGGAGGGCCATGTCCACGCACTGTGTGGCCCATGG...GATCCCTGATAATACCTTAGCTTGATTCTTAGGCTGGGAAAAGGTGGTGGGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR CCA 90 bp ATCACCCCAGAAATTCAGGAAGCTGAGGCAAGAGGACTGGGAGTTCAAGGCCAGGGGCCTGGTGTTGCTTaGCTGCCTACAAAAGGGAAC +
Preference number: 2 (lower is better)
Translates to: ITPEIQEAEARGLGVQGQGPGVA*LPTKGN
Trigger: GTTCCCTTTTGTAGGCAGCCAAGCAACACCAGGCCC...CTGGCCTTGAACTCCCAGTCCTCTTGCCTCAGCTTCCTGAATTTCTGGGGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CAA 90 bp TCAGCTGACACCCACGCTTTGGTTCTTGCTGCACTGTACTCAAACTaGGCACCGACTGCTGTCCGGAGAGGTAGTTTCCTTTCCAGAGGA +
Preference number: 2 (lower is better)
Translates to: SADTHALVLAALYSN*APTAVRRGSFLSRG
Trigger: TCCTCTGGAAAGGAAACTACCTCTCCGGACAGCAGTCGGTGCCAAGTTTGAGTACAGTGCAGCAAGAACCAAAGCGTGGGTGTCAGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR TCA 90 bp CCATCTCTGGAACTCGGATTCCCATCGTATTGGGTACCACTGCTTTTAAAGCACGAGGGCTGCAGGCTGTaGTGGGCTTTTCCACTCGGT +
Preference number: 2 (lower is better)
Translates to: PSLELGFPSYWVPLLLKHEGCRL*WAFPLG
Trigger: ACCGAGTGGAAAAGCCCATCACAGCCTGCAGCCCTC...GTGCTTTAAAAGCAGTGGTACCCAATACGATGGGAATCCGAGTTCCAGAGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR TCA 90 bp TATTATCAGGGATCCCAAATGCCCCTCCCACCCAGGAAGGACGTTAAGAGGAGACCTGGGATCCATTCCTaGGGAGCTGGGCTAGATAGA +
Preference number: 2 (lower is better)
Translates to: YYQGSQMPLPPRKDVKRRPGIHS*GAGLDR
Trigger: TCTATCTAGCCCAGCTCCTCAGGAATGGATCCCAGG...TCTCCTCTTAACGTCCTTCCTGGGTGGGAGGGGCATTTGGGATCCCTGATAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR CCA 90 bp CCATCTCTGGAACTCGGATTCCCATCGTATTGGGTACCACTGCTTTTAAAGCACGCTTCTGTCCAGGCCTaGGGCTCAGGCTCTTGTTGT +
Preference number: 2 (lower is better)
Translates to: PSLELGFPSYWVPLLLKHASVQA*GSGSCC
Trigger: ACAACAAGAGCCTGAGCCCCAGGCCTGGACAGAAGC...GTGCTTTAAAAGCAGTGGTACCCAATACGATGGGAATCCGAGTTCCAGAGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR CCA 90 bp ATCACCCCAGAAATTCAGGAAGCTGAGGCAAGAGGACTGGGAGTTCAAGGCCAGACAGAAATGACTGGCTaGGGAGCTTGGGAGATAGCT +
Preference number: 2 (lower is better)
Translates to: ITPEIQEAEARGLGVQGQTEMTG*GAWEIA
Trigger: AGCTATCTCCCAAGCTCCCCAGCCAGTCATTTCTGT...CTGGCCTTGAACTCCCAGTCCTCTTGCCTCAGCTTCCTGAATTTCTGGGGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR TCA 90 bp CCATCTCTGGAACTCGGATTCCCATCGTATTGGGTACCACTGCTTTTAAAGCACCTCCTGGCCAGGATGTaGTGTTTCCCACACATGAGG +
Preference number: 2 (lower is better)
Translates to: PSLELGFPSYWVPLLLKHLLARM*CFPHMR
Trigger: CCTCATGTGTGGGAAACATCACATCCTGGCCAGGAG...GTGCTTTAAAAGCAGTGGTACCCAATACGATGGGAATCCGAGTTCCAGAGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR CCA 90 bp CTGCCTACAAAAGGGAACCTCAGAGACACATGGTCTGCTCTGTGTGTCTCAGGTATCCTAGCCTGTGGCTaGGAAGTTCTTGCCATTCTG +
Preference number: 2 (lower is better)
Translates to: LPTKGNLRDTWSALCVSGILACG*EVLAIL
Trigger: CAGAATGGCAAGAACTTCCCAGCCACAGGCTAGGAT...ACCTGAGACACACAGAGCAGACCATGTGTCTCTGAGGTTCCCTTTTGTAGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR TCA 90 bp CCATCTCTGGAACTCGGATTCCCATCGTATTGGGTACCACTGCTTTTAAAGCACCCCTGGAGTAAAGGGTaGTGGAGGGAAAGATCAGCA +
Preference number: 2 (lower is better)
Translates to: PSLELGFPSYWVPLLLKHPWSKG*WRERSA
Trigger: TGCTGATCTTTCCCTCCATCACCCTTTACTCCAGGG...GTGCTTTAAAAGCAGTGGTACCCAATACGATGGGAATCCGAGTTCCAGAGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR GCA 90 bp ATCACCCCAGAAATTCAGGAAGCTGAGGCAAGAGGACTGGGAGTTCAAGGCCAGTGGTGTATGTTAAAGTaGTGTTGGTCACTTGTCCGG +
Preference number: 2 (lower is better)
Translates to: ITPEIQEAEARGLGVQGQWCMLK*CWSLVR
Trigger: CCGGACAAGTGACCAACAGCACTTTAACATACACCA...CTGGCCTTGAACTCCCAGTCCTCTTGCCTCAGCTTCCTGAATTTCTGGGGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR GCA 90 bp AATTATCATTCAGTTAAGAAAAAGAACCGCCTCACTATTGGCTTTAGCCCCTCCGGGAGCACGCTCTGGTaGCAGCTTCTGCCCAGCAGA +
Preference number: 2 (lower is better)
Translates to: NYHSVKKKNRLTIGFSPSGSTLW*QLLPSR
Trigger: TCTGCTGGGCAGAAGCTGGCACCAGAGCGTGCTCCC...GGAGGGGCTAAAGCCAATAGTGAGGCGGTTCTTTTTCTTAACTGAATGATAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR CCA 90 bp TTAATGGTGAAGATCTGCCTCAGAGCACGGAGCCCACGTTTCAGGAACTGGGACTGCCATTCTGTTTTCTaGTCTATTCCCGGATCAGTC +
Preference number: 2 (lower is better)
Translates to: LMVKICLRARSPRFRNWDCHSVF*SIPGSV
Trigger: GACTGATCCGGGAATAGACCAGAAAACAGAATGGCA...GTCCCAGTTCCTGAAACGTGGGCTCCGTGCTCTGAGGCAGATCTTCACCATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR CCA 90 bp ACCCCCACCACCTTTTCCCAGCCTAAGAATCAAGCTAAGGTATTATCAGGGATCCTGTATCCTAGCCTGTaGCTGGGAAGTTCTTGCCAT +
Preference number: 2 (lower is better)
Translates to: TPTTFSQPKNQAKVLSGILYPSL*LGSSCH
Trigger: ATGGCAAGAACTTCCCAGCCACAGGCTAGGATACAG...GATCCCTGATAATACCTTAGCTTGATTCTTAGGCTGGGAAAAGGTGGTGGGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR GCA 90 bp AATTATCATTCAGTTAAGAAAAAGAACCGCCTCACTATTGGCTTTAGCCCCTCCACCGCCCAGATCCTCTaGTGTCTTCCTGCCGCATAC +
Preference number: 2 (lower is better)
Translates to: NYHSVKKKNRLTIGFSPSTAQIL*CLPAAY
Trigger: GTATGCGGCAGGAAGACAGCAGAGGATCTGGGCGGT...GGAGGGGCTAAAGCCAATAGTGAGGCGGTTCTTTTTCTTAACTGAATGATAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR CCA 90 bp GCAGGAGACCTCCAAAACACTGGCTTGAAGCCGAGTACTACAGAAATGACTGGCTCACGAGACTTGGTGTaGTGTATGTTAAAGTGCTGT +
Preference number: 2 (lower is better)
Translates to: AGDLQNTGLKPSTTEMTGSRDLV*CMLKCC
Trigger: ACAGCACTTTAACATACACCACACCAAGTCTCGTGA...GCCAGTCATTTCTGTAGTACTCGGCTTCAAGCCAGTGTTTTGGAGGTCTCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CAA 90 bp AAAGTTCTAAGCCAGCAAATTCAGACTCAGAAGCCAAGGTGCCATTaGGATACATACAGGACAGAGAACATGAACATTCAGTGGGTCACG +
Preference number: 2 (lower is better)
Translates to: KVLSQQIQTQKPRCH*DTYRTENMNIQWVT
Trigger: CGTGACCCACTGAATGTTCATGTTCTCTGTCCTGTATGTATCCAAATGGCACCTTGGCTTCTGAGTCTGAATTTGCTGGCTTAGAACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR GCA 90 bp AATTATCATTCAGTTAAGAAAAAGAACCGCCTCACTATTGGCTTTAGCCCCTCCGTGTGTGTGTGTGCGTaGACACACAGACAAGGACTT +
Preference number: 2 (lower is better)
Translates to: NYHSVKKKNRLTIGFSPSVCVCA*THRQGL
Trigger: AAGTCCTTGTCTGTGTGTGCACGCACACACACACAC...GGAGGGGCTAAAGCCAATAGTGAGGCGGTTCTTTTTCTTAACTGAATGATAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR GCA 72 bp GGGGTGCTCCAGGGTTGCCAGCCATGGGCCACACAGTaGGTGGACATGGCCCTCCTGGCTCAGAGCTTGTGG +
Preference number: 3 (lower is better)
Translates to: GVLQGCQPWATQ*VDMALLAQSLW
Trigger: CCACAAGCTCTGAGCCAGGAGGGCCATGTCCACGCACTGTGTGGCCCATGGCTGGCAACCCTGGAGCACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR GCA 72 bp TCCCCCAACCCAGGGCTTAGTGGGGTGCTCCAGGGTTaGCAGCCATGGGCCACACAGTGCGTGGACATGGCC +
Preference number: 3 (lower is better)
Translates to: SPNPGLSGVLQG*QPWATQCVDMA
Trigger: GGCCATGTCCACGCACTGTGTGGCCCATGGCTGGCAACCCTGGAGCACCCCACTAAGCCCTGGGTTGGGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR GCA 72 bp CTGCCTCGTGCCCAGATGGTACCTCTGGAGAAGGCATaGGGCTGGCCTCATCTGTGGGACAGGCCTGCCCAG +
Preference number: 3 (lower is better)
Translates to: LPRAQMVPLEKA*GWPHLWDRPAQ
Trigger: CTGGGCAGGCCTGTCCCACAGATGAGGCCAGCCGCATGCCTTCTCCAGAGGTACCATCTGGGCACGAGGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CCA 72 bp CAGTGCGTGGACATGGCCCTCCTGGCTCAGAGCTTGTaGGAGCACGCTCTGGTGCCAGCTTCTGCCCAGCAG +
Preference number: 3 (lower is better)
Translates to: QCVDMALLAQSL*EHALVPASAQQ
Trigger: CTGCTGGGCAGAAGCTGGCACCAGAGCGTGCTCCCACAAGCTCTGAGCCAGGAGGGCCATGTCCACGCACTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CCA 72 bp AGCCATGGGCCACACAGTGCGTGGACATGGCCCTCCTaGCTCAGAGCTTGTGGGAGCACGCTCTGGTGCCAG +
Preference number: 3 (lower is better)
Translates to: SHGPHSAWTWPS*LRACGSTLWCQ
Trigger: CTGGCACCAGAGCGTGCTCCCACAAGCTCTGAGCCAGGAGGGCCATGTCCACGCACTGTGTGGCCCATGGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CCA 72 bp TGCTCCAGGGTTGCCAGCCATGGGCCACACAGTGCGTaGACATGGCCCTCCTGGCTCAGAGCTTGTGGGAGC +
Preference number: 3 (lower is better)
Translates to: CSRVASHGPHSA*TWPSWLRACGS
Trigger: GCTCCCACAAGCTCTGAGCCAGGAGGGCCATGTCCACGCACTGTGTGGCCCATGGCTGGCAACCCTGGAGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CCA 72 bp GTACCTCTGGAGAAGGCATGCGGCTGGCCTCATCTGTaGGACAGGCCTGCCCAGGCTGTTATGCCCCGTGCC +
Preference number: 3 (lower is better)
Translates to: VPLEKACGWPHL*DRPAQAVMPRA
Trigger: GGCACGGGGCATAACAGCCTGGGCAGGCCTGTCCCACAGATGAGGCCAGCCGCATGCCTTCTCCAGAGGTAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR CAA 90 bp GCAGCAGGCAGAAGGCCTCTGTTCTCTGCCCCGCCCACCCGGCCCAGCAAGCCAAGGGCCTGGTGTTGCTaGGCTGCCTACAAAAGGGAA +
Preference number: 3 (lower is better)
Translates to: AAGRRPLFSAPPTRPSKPRAWCC*AAYKRE
Trigger: TTCCCTTTTGTAGGCAGCCAAGCAACACCAGGCCCT...TGGCTTGCTGGGCCGGGTGGGCGGGGCAGAGAACAGAGGCCTTCTGCCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CCA 72 bp AGGAGCCTGGGTTTGCACTGTGCTTCTGTCCAGGCCTaGGGCTCAGGCTCTTGTTGTGGGCGCTGCCTGGGA +
Preference number: 3 (lower is better)
Translates to: RSLGLHCASVQA*GSGSCCGRCLG
Trigger: TCCCAGGCAGCGCCCACAACAAGAGCCTGAGCCCCAGGCCTGGACAGAAGCACAGTGCAAACCCAGGCTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CCA 72 bp TATCAGGGAGAGCGGCATGTTCACCAGGGCCTGGTGTaGTCGAGCGCAGGGCCTGGTGTTGCTTGGCTGCCT +
Preference number: 3 (lower is better)
Translates to: YQGERHVHQGLV*SSAGPGVAWLP
Trigger: AGGCAGCCAAGCAACACCAGGCCCTGCGCTCGACCACACCAGGCCCTGGTGAACATGCCGCTCTCCCTGATA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CCA 72 bp AGAGGAGGCAGGTGCTCCGCCCTGGTCCCTGATGTGTaGGGGGCACTGGTGGCTTCAATGGCAGCAGCCATA +
Preference number: 3 (lower is better)
Translates to: RGGRCSALVPDV*GALVASMAAAI
Trigger: TATGGCTGCTGCCATTGAAGCCACCAGTGCCCCCCACACATCAGGGACCAGGGCGGAGCACCTGCCTCCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CCA 72 bp TGGGTCCGCAGGCCTTTCTTACCCCTGCCTCCAGAGTaGGACCTTCGCTCACTGAGGTGGGGCACGTCCCAT +
Preference number: 3 (lower is better)
Translates to: WVRRPFLPLPPE*DLRSLRWGTSH
Trigger: ATGGGACGTGCCCCACCTCAGTGAGCGAAGGTCCCACTCTGGAGGCAGGGGTAAGAAAGGCCTGCGGACCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR CAA 90 bp CCCACCATCCATCATCCTCCTGCTGAGCAAGTGGCTGACCGACTTCCCTTGCAGGGGCTCAGGCTCTTGTaGTGGGCGCTGCCTGGGATC +
Preference number: 3 (lower is better)
Translates to: PTIHHPPAEQVADRLPLQGLRLL*WALPGI
Trigger: GATCCCAGGCAGCGCCCACAACAAGAGCCTGAGCCC...CTGCAAGGGAAGTCGGTCAGCCACTTGCTCAGCAGGAGGATGATGGATGGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR CAA 90 bp GCAGCAGGCAGAAGGCCTCTGTTCTCTGCCCCGCCCACCCGGCCCAGCAAGCCATCAACCCAGAGCTCTTaGATCCATCAATGTGGGAGC +
Preference number: 3 (lower is better)
Translates to: AAGRRPLFSAPPTRPSKPSTQSS*IHQCGS
Trigger: GCTCCCACATTGATGGATCAAAGAGCTCTGGGTTGA...TGGCTTGCTGGGCCGGGTGGGCGGGGCAGAGAACAGAGGCCTTCTGCCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR TCA 72 bp GGGAGCACGCTCTGGTGCCAGCTTCTGCCCAGCAGATaGCCAAACCCACTCCGCAGAGCAGCAGCACTAGTC +
Preference number: 3 (lower is better)
Translates to: GSTLWCQLLPSR*PNPLRRAAALV
Trigger: GACTAGTGCTGCTGCTCTGCGGAGTGGGTTTGGTCATCTGCTGGGCAGAAGCTGGCACCAGAGCGTGCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR GCA 72 bp CGCTTCCTCCCTTCGAGCATCCTCTGTCCTGCCTCGTaGCCAGATGGTACCTCTGGAGAAGGCATGCGGCTG +
Preference number: 3 (lower is better)
Translates to: RFLPSSILCPAS*PDGTSGEGMRL
Trigger: CAGCCGCATGCCTTCTCCAGAGGTACCATCTGGGCACGAGGCAGGACAGAGGATGCTCGAAGGGAGGAAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CCA 72 bp TGGACCACACCTGGCCACTGTCTGCACTCAGGCTTTTaGGGTGCCTGGGCCCCAGATTCCTCCACACTGGTC +
Preference number: 3 (lower is better)
Translates to: WTTPGHCLHSGF*GAWAPDSSTLV
Trigger: GACCAGTGTGGAGGAATCTGGGGCCCAGGCACCCCAAAAGCCTGAGTGCAGACAGTGGCCAGGTGTGGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR CAA 90 bp CTGCCTCAGAGCACGGAGCCCACGTTTCAGGAACTGGGACAGCAACCTGCTCATGCTGACCGACTTCCCTaGCAGCTGGCTCAGGCTTCC +
Preference number: 3 (lower is better)
Translates to: LPQSTEPTFQELGQQPAHADRLP*QLAQAS
Trigger: GGAAGCCTGAGCCAGCTGCAAGGGAAGTCGGTCAGC...ATGAGCAGGTTGCTGTCCCAGTTCCTGAAACGTGGGCTCCGTGCTCTGAGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR TCA 72 bp CACCAGGCAGAGAAGGCGGCTGACTGGTGGGTGGTTTaGTACCAACGACAGGGCCTGGGGCTCTGTCCAAGT +
Preference number: 3 (lower is better)
Translates to: HQAEKAADWWVV*YQRQGLGLCPS
Trigger: ACTTGGACAGAGCCCCAGGCCCTGTCGTTGGTATCAAACCACCCACCAGTCAGCCGCCTTCTCTGCCTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR GCA 72 bp CCCGGCCCAGCAAGCCAAAGTCCCTGTCAGAGGGCCTaGTCTGAAGGGAAGTGGTGTCTGCAGTGGCAATCT +
Preference number: 3 (lower is better)
Translates to: PGPASQSPCQRA*SEGKWCLQWQS
Trigger: AGATTGCCACTGCAGACACCACTTCCCTTCAGAGCAGGCCCTCTGACAGGGACTTTGGCTTGCTGGGCCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR GCA 72 bp GTTAGGGAGGGCAGAGAGAGAGAGAGACGTGCCATATaGCAGTCTGTGGGGGCACCTAGGCCACACCCTGCT +
Preference number: 3 (lower is better)
Translates to: VREGRERERRAI*QSVGAPRPHPA
Trigger: AGCAGGGTGTGGCCTAGGTGCCCCCACAGACTGGCATATGGCACGTCTCTCTCTCTCTCTGCCCTCCCTAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CCA 72 bp TGTTCACCAGGGCCTGGTGTGGTCGAGCGCAGGGCCTaGTGTTGCTTGGCTGCCTACAAAAGGGAACCTCAG +
Preference number: 3 (lower is better)
Translates to: CSPGPGVVERRA*CCLAAYKREPQ
Trigger: CTGAGGTTCCCTTTTGTAGGCAGCCAAGCAACACCAGGCCCTGCGCTCGACCACACCAGGCCCTGGTGAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CCA 72 bp CATCCTCTGTCCTGCCTCGTGCCCAGATGGTACCTCTaGAGAAGGCATGCGGCTGGCCTCATCTGTGGGACA +
Preference number: 3 (lower is better)
Translates to: HPLSCLVPRWYL*RRHAAGLICGT
Trigger: TGTCCCACAGATGAGGCCAGCCGCATGCCTTCTCCAGAGGTACCATCTGGGCACGAGGCAGGACAGAGGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CCA 72 bp GCTTCCTGCCTCATCCTTCGTGAGATCCTGGGAGGATaGAGGACAGGAGTGTCCATGGTGCCTGGCTCTCCG +
Preference number: 3 (lower is better)
Translates to: ASCLILREILGG*RTGVSMVPGSP
Trigger: CGGAGAGCCAGGCACCATGGACACTCCTGTCCTCCATCCTCCCAGGATCTCACGAAGGATGAGGCAGGAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000198422.2
3UTR-3UTR CAA 90 bp CCTGTGACCACAGCCTCCAGGTCTGGAGTCCCTTCCAGCAAAGGCAGCTTGTCCGAGAGGAGCCTGGGTTaGCACTGTGCTTCTGTCCAG +
Preference number: 3 (lower is better)
Translates to: PVTTASRSGVPSSKGSLSERSLG*HCASVQ
Trigger: CTGGACAGAAGCACAGTGCAAACCCAGGCTCCTCTC...GGACAAGCTGCCTTTGCTGGAAGGGACTCCAGACCTGGAGGCTGTGGTCACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR CAA 90 bp CAGGTCTGGAGTCCCTTCCAGCAAAGGCAGCTTGTCCAGCCTGCTCTCTGCCCAGCACTGTACTCAAACTaGGCACCGACTGCTGTCCGG +
Preference number: 3 (lower is better)
Translates to: QVWSPFQQRQLVQPALCPALYSN*APTAVR
Trigger: CCGGACAGCAGTCGGTGCCAAGTTTGAGTACAGTGC...TGGGCAGAGAGCAGGCTGGACAAGCTGCCTTTGCTGGAAGGGACTCCAGACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR GCA 72 bp AGGAGACGGTGTGAGCAGATCACCGCCCAGATCCTCTaGTGTCTTCCTGCCGCATACCACCCACCATCCATC +
Preference number: 3 (lower is better)
Translates to: RRRCEQITAQIL*CLPAAYHPPSI
Trigger: GATGGATGGTGGGTGGTATGCGGCAGGAAGACAGCAGAGGATCTGGGCGGTGATCTGCTCACACCGTCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR GCA 72 bp TACCAACGACAGGGCCTGGGGCTCTGTCCAAGTTGTTaGCAGCTGCTTACCGACCACCCTCTAGGAGGACCA +
Preference number: 3 (lower is better)
Translates to: YQRQGLGLCPSC*QLLTDHPLGGP
Trigger: TGGTCCTCCTAGAGGGTGGTCGGTAAGCAGCTGGCAACAACTTGGACAGAGCCCCAGGCCCTGTCGTTGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR GCA 72 bp CGCCACCCCTTTCTGACTTATTCTAAGCAGGCACTGTaGAGTTCGGATGGGGAGGGAGGGACTGGGCGAGCA +
Preference number: 3 (lower is better)
Translates to: RHPFLTYSKQAL*SSDGEGGTGRA
Trigger: TGCTCGCCCAGTCCCTCCCTCCCCATCCGAACTGCACAGTGCCTGCTTAGAATAAGTCAGAAAGGGGTGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CCA 72 bp AGGAAATCCGTGGACCCACTCTCAGAGAGAGGAGCCTaGGTTTGCACTGTGCTTCTGTCCAGGCCTGGGGCT +
Preference number: 3 (lower is better)
Translates to: RKSVDPLSERGA*VCTVLLSRPGA
Trigger: AGCCCCAGGCCTGGACAGAAGCACAGTGCAAACCCAGGCTCCTCTCTCTGAGAGTGGGTCCACGGATTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR GCA 72 bp TGGTGTGGTCGAGCGCAGGGCCTGGTGTTGCTTGGCTaGCTACAAAAGGGAACCTCAGAGACACATGGTCTG +
Preference number: 3 (lower is better)
Translates to: WCGRAQGLVLLG*LQKGTSETHGL
Trigger: CAGACCATGTGTCTCTGAGGTTCCCTTTTGTAGGCAGCCAAGCAACACCAGGCCCTGCGCTCGACCACACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR GCA 72 bp GCTGGCTCAGGCTTCCCTGGAGATCCGTTTGTAGCTTaGAGCTCTCGACTCATTCAGTGCTGTGGGCACTGG +
Preference number: 3 (lower is better)
Translates to: AGSGFPGDPFVA*SSRLIQCCGHW
Trigger: CCAGTGCCCACAGCACTGAATGAGTCGAGAGCTGCAAGCTACAAACGGATCTCCAGGGAAGCCTGAGCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR GCA 72 bp AGGCCTGATAGAGGGAACCTTGGAGCAGTGAGGCAATaGAGAGGAGCAGCCAGGACCACTCAGGGGGCTTTT +
Preference number: 3 (lower is better)
Translates to: RPDRGNLGAVRQ*RGAARTTQGAF
Trigger: AAAAGCCCCCTGAGTGGTCCTGGCTGCTCCTCTGCATTGCCTCACTGCTCCAAGGTTCCCTCTATCAGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CCA 72 bp GTCCTTGAATGTAGCTGCTGGCCACTAGGGCTCCTGTaGCGTGAGTTTCACTCCACCTTCCTGCAGGCGACA +
Preference number: 3 (lower is better)
Translates to: VLECSCWPLGLL*REFHSTFLQAT
Trigger: TGTCGCCTGCAGGAAGGTGGAGTGAAACTCACGCCACAGGAGCCCTAGTGGCCAGCAGCTACATTCAAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CCA 72 bp CCCGGGCGTCCAAGTCCTCAGCTGACACCCACGCTTTaGTTCTTGCTGCACTGTACTCAAACTTGGCACCGA +
Preference number: 3 (lower is better)
Translates to: PGRPSPQLTPTL*FLLHCTQTWHR
Trigger: TCGGTGCCAAGTTTGAGTACAGTGCAGCAAGAACCAAAGCGTGGGTGTCAGCTGAGGACTTGGACGCCCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR TCA 72 bp TTGGAGGGTGACCATGGACAGCCCTGGAGTAAAGGGTaGTGGAGGGAAAGATCAGCAGCTGGCACCAACGTC +
Preference number: 3 (lower is better)
Translates to: LEGDHGQPWSKG*WRERSAAGTNV
Trigger: GACGTTGGTGCCAGCTGCTGATCTTTCCCTCCATCACCCTTTACTCCAGGGCTGTCCATGGTCACCCTCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR TCA 72 bp CCCAGCAAGCCAAAGTCCCTGTCAGAGGGCCTGCTCTaGAGGGAAGTGGTGTCTGCAGTGGCAATCTTTGGA +
Preference number: 3 (lower is better)
Translates to: PSKPKSLSEGLL*REVVSAVAIFG
Trigger: TCCAAAGATTGCCACTGCAGACACCACTTCCCTTCAGAGCAGGCCCTCTGACAGGGACTTTGGCTTGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR GCA 72 bp CCCCAGGCTCACACCAGGCACACAGAGAGAAGTTCATaGCAGGTACCAAGGGAAGATGTGAGACAGAGCCAG +
Preference number: 3 (lower is better)
Translates to: PQAHTRHTERSS*QVPREDVRQSQ
Trigger: CTGGCTCTGTCTCACATCTTCCCTTGGTACCTGGCATGAACTTCTCTCTGTGTGCCTGGTGTGAGCCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR GCA 72 bp CCATACCCTTCCACGCCCCTGTTAATGGTGAAGATCTaGCTCAGAGCACGGAGCCCACGTTTCAGGAACTGG +
Preference number: 3 (lower is better)
Translates to: PYPSTPLLMVKI*LRARSPRFRNW
Trigger: CCAGTTCCTGAAACGTGGGCTCCGTGCTCTGAGGCAGATCTTCACCATTAACAGGGGCGTGGAAGGGTATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CCA 72 bp CTGACCGACTTCCCTTGCAGCTGGCTCAGGCTTCCCTaGAGATCCGTTTGTAGCTTGCAGCTCTCGACTCAT +
Preference number: 3 (lower is better)
Translates to: LTDFPCSWLRLP*RSVCSLQLSTH
Trigger: ATGAGTCGAGAGCTGCAAGCTACAAACGGATCTCCAGGGAAGCCTGAGCCAGCTGCAAGGGAAGTCGGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CCA 72 bp TTTGAAATGAACGCCCAGGTGTTGCTGCTTGGTGTGTaGGTCCGCAGGCCTTTCTTACCCCTGCCTCCAGAG +
Preference number: 3 (lower is better)
Translates to: FEMNAQVLLLGV*VRRPFLPLPPE
Trigger: CTCTGGAGGCAGGGGTAAGAAAGGCCTGCGGACCCACACACCAAGCAGCAACACCTGGGCGTTCATTTCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR CAA 90 bp CCACACATGAGGGACCTTTCACTAGAGCTGAGACGCCACCCCTTTCTGACTTATGCGCAGGGCCTGGTGTaGCTTGGCTGCCTACAAAAG +
Preference number: 3 (lower is better)
Translates to: PHMRDLSLELRRHPFLTYAQGLV*LGCLQK
Trigger: CTTTTGTAGGCAGCCAAGCAACACCAGGCCCTGCGC...ATAAGTCAGAAAGGGGTGGCGTCTCAGCTCTAGTGAAAGGTCCCTCATGTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR CAA 90 bp CCCACACATGAGGGACCTTTCACTAGAGCTGAGACGCCACCCCTTTCTGACTTAGACTGGCTGGGGAGCTaGGGAGATAGCTCAAGAGAG +
Preference number: 3 (lower is better)
Translates to: PTHEGPFTRAETPPLSDLDWLGS*GDSSRE
Trigger: CTCTCTTGAGCTATCTCCCAAGCTCCCCAGCCAGTC...TAAGTCAGAAAGGGGTGGCGTCTCAGCTCTAGTGAAAGGTCCCTCATGTGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR CAA 90 bp ACCCCCACCACCTTTTCCCAGCCTAAGAATCAAGCTAAGGTATTATCAGGGATCTGGGGTGCTCCAGGGTaGCCAGCCATGGGCCACACA +
Preference number: 3 (lower is better)
Translates to: TPTTFSQPKNQAKVLSGIWGAPG*PAMGHT
Trigger: TGTGTGGCCCATGGCTGGCAACCCTGGAGCACCCCA...GATCCCTGATAATACCTTAGCTTGATTCTTAGGCTGGGAAAAGGTGGTGGGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR TCA 72 bp CACACACAGAGACAGACAGACAGACAGACTCCTCACTaGGGGATCTTTACCACTGCTGGCTCGGCACCAGCT +
Preference number: 3 (lower is better)
Translates to: HTQRQTDRQTPH*GIFTTAGSAPA
Trigger: AGCTGGTGCCGAGCCAGCAGTGGTAAAGATCCCTCAGTGAGGAGTCTGTCTGTCTGTCTGTCTCTGTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR GCA 72 bp ATACATCGGAGCTTGGACTTATCCATCCCGGTCATCTaGTCTCCTGTGACCACAGCCTCCAGGTCTGGAGTC +
Preference number: 3 (lower is better)
Translates to: IHRSLDLSIPVI*SPVTTASRSGV
Trigger: GACTCCAGACCTGGAGGCTGTGGTCACAGGAGAGCAGATGACCGGGATGGATAAGTCCAAGCTCCGATGTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CCA 72 bp CCTCTAGGAGGACCAACACTGAGTTTCTGGCTGCTTTaGAGTTTCCTGTCGCACAGCCCCCATGACTGCTTC +
Preference number: 3 (lower is better)
Translates to: PLGGPTLSFWLL*SFLSHSPHDCF
Trigger: GAAGCAGTCATGGGGGCTGTGCGACAGGAAACTCCAAAGCAGCCAGAAACTCAGTGTTGGTCCTCCTAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR CAA 90 bp AGCTTGGACTTATCCATCCCGGTCATCTGCTCTCCTGTGACCACAGCCTCCAGGGTGGCTGGGAAGTTCTaGCCATTCTGTTTTCTGGTC +
Preference number: 3 (lower is better)
Translates to: SLDLSIPVICSPVTTASRVAGKF*PFCFLV
Trigger: GACCAGAAAACAGAATGGCAAGAACTTCCCAGCCAC...CCTGGAGGCTGTGGTCACAGGAGAGCAGATGACCGGGATGGATAAGTCCAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CCA 72 bp ACTGGCTTGAAGCCGAGTACTACAGAAATGACTGGCTaGGGAGCTTGGGAGATAGCTCAAGAGAGGAGGCAG +
Preference number: 3 (lower is better)
Translates to: TGLKPSTTEMTG*GAWEIAQERRQ
Trigger: CTGCCTCCTCTCTTGAGCTATCTCCCAAGCTCCCCAGCCAGTCATTTCTGTAGTACTCGGCTTCAAGCCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CCA 72 bp CAAAGTCCCTGTCAGAGGGCCTGCTCTGAAGGGAAGTaGTGTCTGCAGTGGCAATCTTTGGAACAGCTTGAC +
Preference number: 3 (lower is better)
Translates to: QSPCQRACSEGK*CLQWQSLEQLD
Trigger: GTCAAGCTGTTCCAAAGATTGCCACTGCAGACACCACTTCCCTTCAGAGCAGGCCCTCTGACAGGGACTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR CAA 90 bp TTTGATACCAACGACAGGGCCTGGGGCTCTGTCCAAGTTGTTGCCAGCTGCTTATTTTCCACTCGGTCCTaGAATGTAGCTGCTGGCCAC +
Preference number: 3 (lower is better)
Translates to: FDTNDRAWGSVQVVASCLFSTRS*NVAAGH
Trigger: GTGGCCAGCAGCTACATTCAAGGACCGAGTGGAAAA...TAAGCAGCTGGCAACAACTTGGACAGAGCCCCAGGCCCTGTCGTTGGTATCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR CAA 90 bp TTAATGGTGAAGATCTGCCTCAGAGCACGGAGCCCACGTTTCAGGAACTGGGACCAGTCTCTGTCACTTTaGGGGAGAGGGCTCTGTATC +
Preference number: 3 (lower is better)
Translates to: LMVKICLRARSPRFRNWDQSLSL*GRGLCI
Trigger: GATACAGAGCCCTCTCCCCAAAAGTGACAGAGACTG...GTCCCAGTTCCTGAAACGTGGGCTCCGTGCTCTGAGGCAGATCTTCACCATTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR CAA 90 bp ACCCCCACCACCTTTTCCCAGCCTAAGAATCAAGCTAAGGTATTATCAGGGATCTGGCACCAACGTCCCTaGTCACCTCAGCCCACTACG +
Preference number: 3 (lower is better)
Translates to: TPTTFSQPKNQAKVLSGIWHQRP*SPQPTT
Trigger: CGTAGTGGGCTGAGGTGACAAGGGACGTTGGTGCCA...GATCCCTGATAATACCTTAGCTTGATTCTTAGGCTGGGAAAAGGTGGTGGGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR TCA 72 bp TCGACTCATTCAGTGCTGTGGGCACTGGCCCTGGGCTaGCTTTCAACCCAGAGCTCTTTGATCCATCAATGT +
Preference number: 3 (lower is better)
Translates to: STHSVLWALALG*LSTQSSLIHQC
Trigger: ACATTGATGGATCAAAGAGCTCTGGGTTGAAAGTCAGCCCAGGGCCAGTGCCCACAGCACTGAATGAGTCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR TCA 72 bp AGAGTCAGCCAGTCCCAGGGACACAGGGGACAGTGCTaGGGTTGCTCTAATGGTGGTAAGTGCTTCACATAT +
Preference number: 3 (lower is better)
Translates to: RVSQSQGHRGQC*GCSNGGKCFTY
Trigger: ATATGTGAAGCACTTACCACCATTAGAGCAACCTCAGCACTGTCCCCTGTGTCCCTGGGACTGGCTGACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR GCA 72 bp GCTGCCTACAAAAGGGAACCTCAGAGACACATGGTCTaGTCTGTGTGTCTCAGGTTGGAGATGAGCCCAGAT +
Preference number: 3 (lower is better)
Translates to: AAYKREPQRHMV*SVCLRLEMSPD
Trigger: ATCTGGGCTCATCTCCAACCTGAGACACACAGAGCAGACCATGTGTCTCTGAGGTTCCCTTTTGTAGGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR GCA 72 bp CCTGTCAGAGGGCCTGCTCTGAAGGGAAGTGGTGTCTaGAGTGGCAATCTTTGGAACAGCTTGACTTATCCT +
Preference number: 3 (lower is better)
Translates to: PVRGPALKGSGV*SGNLWNSLTYP
Trigger: AGGATAAGTCAAGCTGTTCCAAAGATTGCCACTGCAGACACCACTTCCCTTCAGAGCAGGCCCTCTGACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CCA 72 bp GCTCTAATGGTGGTAAGTGCTTCACATATGGGGTTGTaGACCACACCTGGCCACTGTCTGCACTCAGGCTTT +
Preference number: 3 (lower is better)
Translates to: ALMVVSASHMGL*TTPGHCLHSGF
Trigger: AAAGCCTGAGTGCAGACAGTGGCCAGGTGTGGTCCACAACCCCATATGTGAAGCACTTACCACCATTAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR CAA 90 bp TATTATCAGGGATCCCAAATGCCCCTCCCACCCAGGAAGGACGTTAAGAGGAGACCCACGCTTTGGTTCTaGCTGCACTGTACTCAAACT +
Preference number: 3 (lower is better)
Translates to: YYQGSQMPLPPRKDVKRRPTLWF*LHCTQT
Trigger: AGTTTGAGTACAGTGCAGCAAGAACCAAAGCGTGGG...TCTCCTCTTAACGTCCTTCCTGGGTGGGAGGGGCATTTGGGATCCCTGATAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR TCA 72 bp CCATTTGTGGTGACTTTGCCTCTCCTGGCCAGGATGTaGTGTTTCCCACACATGAGGGACCTTTCACTAGAG +
Preference number: 3 (lower is better)
Translates to: PFVVTLPLLARM*CFPHMRDLSLE
Trigger: CTCTAGTGAAAGGTCCCTCATGTGTGGGAAACATCACATCCTGGCCAGGAGAGGCAAAGTCACCACAAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CCA 72 bp CTGACTTTCAACCCAGAGCTCTTTGATCCATCAATGTaGGAGCCGCCCATCCTTCTTGGAGTTATCAGGGAG +
Preference number: 3 (lower is better)
Translates to: LTFNPELFDPSM*EPPILLGVIRE
Trigger: CTCCCTGATAACTCCAAGAAGGATGGGCGGCTCCCACATTGATGGATCAAAGAGCTCTGGGTTGAAAGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CCA 72 bp AAACACTGGCTTGAAGCCGAGTACTACAGAAATGACTaGCTGGGGAGCTTGGGAGATAGCTCAAGAGAGGAG +
Preference number: 3 (lower is better)
Translates to: KHWLEAEYYRND*LGSLGDSSREE
Trigger: CTCCTCTCTTGAGCTATCTCCCAAGCTCCCCAGCCAGTCATTTCTGTAGTACTCGGCTTCAAGCCAGTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CCA 72 bp CCTTTCCAGGCAATAGGCAGGAGACCTCCAAAACACTaGCTTGAAGCCGAGTACTACAGAAATGACTGGCTG +
Preference number: 3 (lower is better)
Translates to: PFQAIGRRPPKH*LEAEYYRNDWL
Trigger: CAGCCAGTCATTTCTGTAGTACTCGGCTTCAAGCCAGTGTTTTGGAGGTCTCCTGCCTATTGCCTGGAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CCA 72 bp TTGGATACATACAGGACAGAGAACATGAACATTCAGTaGGTCACGGAGCTCAGAGTCAGCCAGTCCCAGGGA +
Preference number: 3 (lower is better)
Translates to: LDTYRTENMNIQ*VTELRVSQSQG
Trigger: TCCCTGGGACTGGCTGACTCTGAGCTCCGTGACCCACTGAATGTTCATGTTCTCTGTCCTGTATGTATCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR CAA 90 bp TCTTCCTGCCGCATACCACCCACCATCCATCATCCTCCTGCTGAGCAAGTGGCTTACGTGTTTATGTGTTaGTTTCAAACCATGGGAGGA +
Preference number: 3 (lower is better)
Translates to: SSCRIPPTIHHPPAEQVAYVFMC*FQTMGG
Trigger: TCCTCCCATGGTTTGAAACAAACACATAAACACGTA...AGCCACTTGCTCAGCAGGAGGATGATGGATGGTGGGTGGTATGCGGCAGGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR CAA 90 bp ACCCCCACCACCTTTTCCCAGCCTAAGAATCAAGCTAAGGTATTATCAGGGATCTCTGTGTGTCTCAGGTaGGAGATGAGCCCAGATTCC +
Preference number: 3 (lower is better)
Translates to: TPTTFSQPKNQAKVLSGISVCLR*EMSPDS
Trigger: GGAATCTGGGCTCATCTCCAACCTGAGACACACAGA...GATCCCTGATAATACCTTAGCTTGATTCTTAGGCTGGGAAAAGGTGGTGGGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR CAA 90 bp ACCCCCACCACCTTTTCCCAGCCTAAGAATCAAGCTAAGGTATTATCAGGGATCACATCTGTTCCTGAATaGTTCCCCCAACCCAGGGCT +
Preference number: 3 (lower is better)
Translates to: TPTTFSQPKNQAKVLSGITSVPE*FPQPRA
Trigger: AGCCCTGGGTTGGGGGAACAATTCAGGAACAGATGT...GATCCCTGATAATACCTTAGCTTGATTCTTAGGCTGGGAAAAGGTGGTGGGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR GCA 72 bp CAGCCAGTGGTAGAGCACTGGCCTAGTAGCTCACCTTaGAGGACAGACCCAAACAAACAAAACCCAAAACAA +
Preference number: 3 (lower is better)
Translates to: QPVVEHWPSSSP*RTDPNKQNPKQ
Trigger: TTGTTTTGGGTTTTGTTTGTTTGGGTCTGTCCTGCAAGGTGAGCTACTAGGCCAGTGCTCTACCACTGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR GCA 72 bp AAGGAAACATCTGTGGTTGGTTCAAAAATGTTCCCTTaGCAAGCAGCTGTGACGTTAGGGGTTAGGGAGGGC +
Preference number: 3 (lower is better)
Translates to: KETSVVGSKMFP*QAAVTLGVREG
Trigger: GCCCTCCCTAACCCCTAACGTCACAGCTGCTTGGCAAGGGAACATTTTTGAACCAACCACAGATGTTTCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR-3UTR CAA 90 bp AATTATCATTCAGTTAAGAAAAAGAACCGCCTCACTATTGGCTTTAGCCCCTCCTCCAGCAAAGGCAGCTaGTCCAGCCTGCTCTCTGCC +
Preference number: 3 (lower is better)
Translates to: NYHSVKKKNRLTIGFSPSSSKGS*SSLLSA
Trigger: GGCAGAGAGCAGGCTGGACAAGCTGCCTTTGCTGGA...GGAGGGGCTAAAGCCAATAGTGAGGCGGTTCTTTTTCTTAACTGAATGATAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR GCA 72 bp AAAACAAAACAATCTAGAGCCCAACAAGCAGGTGGGTaGAAGACCCACCCTGAGTTCATGAGAACTCCCAAG +
Preference number: 3 (lower is better)
Translates to: KTKQSRAQQAGG*KTHPEFMRTPK
Trigger: CTTGGGAGTTCTCATGAACTCAGGGTGGGTCTTGCACCCACCTGCTTGTTGGGCTCTAGATTGTTTTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CCA 72 bp GAAACATTTGATGGCTCCTGCTCACGAGACTTGGTGTaGTGTATGTTAAAGTGCTGTTGGTCACTTGTCCGG +
Preference number: 3 (lower is better)
Translates to: ETFDGSCSRDLV*CMLKCCWSLVR
Trigger: CCGGACAAGTGACCAACAGCACTTTAACATACACCACACCAAGTCTCGTGAGCAGGAGCCATCAAATGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CCA 72 bp CAGAGGGCCTGCTCTGAAGGGAAGTGGTGTCTGCAGTaGCAATCTTTGGAACAGCTTGACTTATCCTTTTTA +
Preference number: 3 (lower is better)
Translates to: QRACSEGKWCLQ*QSLEQLDLSFL
Trigger: TAAAAAGGATAAGTCAAGCTGTTCCAAAGATTGCCACTGCAGACACCACTTCCCTTCAGAGCAGGCCCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR GCA 72 bp CTGCTTTGGAGTTTCCTGTCGCACAGCCCCCATGACTaGTTCTATAAAATCAACTCTCATTCTCACAGAGAG +
Preference number: 3 (lower is better)
Translates to: LLWSFLSHSPHD*FYKINSHSHRE
Trigger: CTCTCTGTGAGAATGAGAGTTGATTTTATAGAAGCAGTCATGGGGGCTGTGCGACAGGAAACTCCAAAGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CCA 72 bp AGCCTGTGGCTGGGAAGTTCTTGCCATTCTGTTTTCTaGTCTATTCCCGGATCAGTCACAAATAGGAAATCC +
Preference number: 3 (lower is better)
Translates to: SLWLGSSCHSVF*SIPGSVTNRKS
Trigger: GGATTTCCTATTTGTGACTGATCCGGGAATAGACCAGAAAACAGAATGGCAAGAACTTCCCAGCCACAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR TCA 72 bp GACACATGGTCTGCTCTGTGTGTCTCAGGTTGGAGATaGGCCCAGATTCCATATTTAGCTGAAAGAAATATT +
Preference number: 3 (lower is better)
Translates to: DTWSALCVSGWR*AQIPYLAERNI
Trigger: AATATTTCTTTCAGCTAAATATGGAATCTGGGCTCATCTCCAACCTGAGACACACAGAGCAGACCATGTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR TCA 72 bp AGCCCAAGTACAGAAACACATGCTTTTCATTGTGACTaGAGCACTCTAAGTATTTTGAGAGAGAGAGACACA +
Preference number: 3 (lower is better)
Translates to: SPSTETHAFHCD*STLSILRERDT
Trigger: TGTGTCTCTCTCTCTCAAAATACTTAGAGTGCTTCAGTCACAATGAAAAGCATGTGTTTCTGTACTTGGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS-3UTR TCA 90 bp GCAGCAGGCAGAAGGCCTCTGTTCTCTGCCCCGCCCACCCGGCCCAGCAAGCCAAGCTGGAGCACTCCGTaGGGACAGAGGCCCGAAGGG +
Preference number: 4 (lower is better)
Translates to: AAGRRPLFSAPPTRPSKPSWSTP*GQRPEG
Trigger: CCCTTCGGGCCTCTGTCCTCACGGAGTGCTCCAGCT...TGGCTTGCTGGGCCGGGTGGGCGGGGCAGAGAACAGAGGCCTTCTGCCTGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS-3UTR CCA 90 bp GATCCTGGGAGGATGGAGGACAGGAGTGTCCATGGTGCCTGGCTCTCCGCTCTGGCACCCGGGGCCTGTTaGGGTAGCTGCAGGGCGGGC +
Preference number: 4 (lower is better)
Translates to: DPGRMEDRSVHGAWLSALAPGAC*GSCRAG
Trigger: GCCCGCCCTGCAGCTACCCCAACAGGCCCCGGGTGC...CAGAGCGGAGAGCCAGGCACCATGGACACTCCTGTCCTCCATCCTCCCAGGATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000198422.2
CDS-3UTR GCA 90 bp ACGAGCCCAGGCCGGCTTCCTGCCTCATCCTTCGTGAGATCCTGGGAGGATGGACGCATAGCACGGGGCTaGAGGGAGCCGAGCGCAGCG +
Preference number: 4 (lower is better)
Translates to: TSPGRLPASSFVRSWEDGRIARG*REPSAA
Trigger: CGCTGCGCTCGGCTCCCTGCAGCCCCGTGCTATGCG...TCCATCCTCCCAGGATCTCACGAAGGATGAGGCAGGAAGCCGGCCTGGGCTCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000198422.2
CDS-3UTR CCA 90 bp GCAGCAGGCAGAAGGCCTCTGTTCTCTGCCCCGCCCACCCGGCCCAGCAAGCCAGTTAGCTGCCTGTCCTaGGCTGAGGAGATGGCCTGC +
Preference number: 4 (lower is better)
Translates to: AAGRRPLFSAPPTRPSKPVSCLS*AEEMAC
Trigger: GCAGGCCATCTCCTCAGCCCAGGACAGGCAGCTAAC...TGGCTTGCTGGGCCGGGTGGGCGGGGCAGAGAACAGAGGCCTTCTGCCTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS-3UTR CCA 90 bp GCAGCAGGCAGAAGGCCTCTGTTCTCTGCCCCGCCCACCCGGCCCAGCAAGCCACCCTCGAGGACTTGCTaGACAGGAGTTGGGGACACT +
Preference number: 4 (lower is better)
Translates to: AAGRRPLFSAPPTRPSKPPSRTC*TGVGDT
Trigger: AGTGTCCCCAACTCCTGTCCAGCAAGTCCTCGAGGG...TGGCTTGCTGGGCCGGGTGGGCGGGGCAGAGAACAGAGGCCTTCTGCCTGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CAA 72 bp GCCTCCAGGTCTGGAGTCCCTTCCAGCAAAGGCAGCTaGTCCAGCCTGCTCTCTGCCCACAGGGCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: ASRSGVPSSKGS*SSLLSAHRALG
Trigger: CCCAAGGGCCCTGTGGGCAGAGAGCAGGCTGGACAAGCTGCCTTTGCTGGAAGGGACTCCAGACCTGGAGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS-3UTR TCA 90 bp CTGCCTCAGAGCACGGAGCCCACGTTTCAGGAACTGGGACAGCAACCTGCTCATGAGGCTCCTGGAAGCTaGGCTGCAGGTGGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: LPQSTEPTFQELGQQPAHEAPGS*AAGGAG
Trigger: CCCGGCGCCACCTGCAGCTCAGCTTCCAGGAGCCTC...ATGAGCAGGTTGCTGTCCCAGTTCCTGAAACGTGGGCTCCGTGCTCTGAGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS-3UTR TCA 90 bp TTCGTGAGATCCTGGGAGGATGGAGGACAGGAGTGTCCATGGTGCCTGGCTCTCGAGGCTCCTGGAAGCTaGGCTGCAGGTGGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: FVRSWEDGGQECPWCLALEAPGS*AAGGAG
Trigger: CCCGGCGCCACCTGCAGCTCAGCTTCCAGGAGCCTC...GAGAGCCAGGCACCATGGACACTCCTGTCCTCCATCCTCCCAGGATCTCACGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000198422.2
3UTR CAA 72 bp ACACAGTGCGTGGACATGGCCCTCCTGGCTCAGAGCTaGTGGGAGCACGCTCTGGTGCCAGCTTCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: TQCVDMALLAQS*WEHALVPASAQ
Trigger: CTGGGCAGAAGCTGGCACCAGAGCGTGCTCCCACAAGCTCTGAGCCAGGAGGGCCATGTCCACGCACTGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS-3UTR TCA 90 bp CTGACGAGCCCAGGCCGGCTTCCTGCCTCATCCTTCGTGAGATCCTGGGAGGATAGTTGCGGCCGATGGTaGCGCTGGGCTGTCGCATCA +
Preference number: 4 (lower is better)
Translates to: LTSPGRLPASSFVRSWEDSCGRW*RWAVAS
Trigger: TGATGCGACAGCCCAGCGTCACCATCGGCCGCAACT...ATCCTCCCAGGATCTCACGAAGGATGAGGCAGGAAGCCGGCCTGGGCTCGTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000198422.2
CDS-3UTR CCA 90 bp TGGGTCCGCAGGCCTTTCTTACCCCTGCCTCCAGAGTGGGACCTTCGCTCACTGACGGTAGGGGCCTGCTaGACCACATGGATGGCGTGG +
Preference number: 4 (lower is better)
Translates to: WVRRPFLPLPPEWDLRSLTVGAC*TTWMAW
Trigger: CCACGCCATCCATGTGGTCCAGCAGGCCCCTACCGT...CAGTGAGCGAAGGTCCCACTCTGGAGGCAGGGGTAAGAAAGGCCTGCGGACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS-3UTR GCA 90 bp ACGAGCCCAGGCCGGCTTCCTGCCTCATCCTTCGTGAGATCCTGGGAGGATGGATCCTGGAAGCTGAGCTaGAGGTGGCGCCGGGAAATG +
Preference number: 4 (lower is better)
Translates to: TSPGRLPASSFVRSWEDGSWKLS*RWRREM
Trigger: CATTTCCCGGCGCCACCTGCAGCTCAGCTTCCAGGA...TCCATCCTCCCAGGATCTCACGAAGGATGAGGCAGGAAGCCGGCCTGGGCTCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000198422.2
CDS-3UTR GCA 90 bp TCTAAGCAGGCACTGTGCAGTTCGGATGGGGAGGGAGGGACTGGGCGAGCAATGAGGCACTCTGGGGTCTaGAGGCCACTGGAACGAGGG +
Preference number: 4 (lower is better)
Translates to: SKQALCSSDGEGGTGRAMRHSGV*RPLERG
Trigger: CCCTCGTTCCAGTGGCCTGCAGACCCCAGAGTGCCT...CATTGCTCGCCCAGTCCCTCCCTCCCCATCCGAACTGCACAGTGCCTGCTTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS-3UTR CCA 90 bp CCTGTGACCACAGCCTCCAGGTCTGGAGTCCCTTCCAGCAAAGGCAGCTTGTCCGGGTCTGCAGGCCACTaGAACGAGGGGACATCAGCC +
Preference number: 4 (lower is better)
Translates to: PVTTASRSGVPSSKGSLSGSAGH*NEGTSA
Trigger: GGCTGATGTCCCCTCGTTCCAGTGGCCTGCAGACCC...GGACAAGCTGCCTTTGCTGGAAGGGACTCCAGACCTGGAGGCTGTGGTCACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS-3UTR GCA 90 bp CAGGTCTGGAGTCCCTTCCAGCAAAGGCAGCTTGTCCAGCCTGCTCTCTGCCCATCCTGGAAGCTGAGCTaGAGGTGGCGCCGGGAAATG +
Preference number: 4 (lower is better)
Translates to: QVWSPFQQRQLVQPALCPSWKLS*RWRREM
Trigger: CATTTCCCGGCGCCACCTGCAGCTCAGCTTCCAGGA...TGGGCAGAGAGCAGGCTGGACAAGCTGCCTTTGCTGGAAGGGACTCCAGACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS-3UTR CCA 90 bp CCCACCATCCATCATCCTCCTGCTGAGCAAGTGGCTGACCGACTTCCCTTGCAGGCCCGGACCGGAAGGTaGTGCTGCCCGATAGTCACT +
Preference number: 4 (lower is better)
Translates to: PTIHHPPAEQVADRLPLQARTGR*CCPIVT
Trigger: AGTGACTATCGGGCAGCACCACCTTCCGGTCCGGGC...CTGCAAGGGAAGTCGGTCAGCCACTTGCTCAGCAGGAGGATGATGGATGGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CAA 72 bp ACCAGGGCCTGGTGTGGTCGAGCGCAGGGCCTGGTGTaGCTTGGCTGCCTACAAAAGGGAACCTCAGAGACA +
Preference number: 4 (lower is better)
Translates to: TRAWCGRAQGLV*LGCLQKGTSET
Trigger: TGTCTCTGAGGTTCCCTTTTGTAGGCAGCCAAGCAACACCAGGCCCTGCGCTCGACCACACCAGGCCCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS-3UTR GCA 90 bp CCTGTGACCACAGCCTCCAGGTCTGGAGTCCCTTCCAGCAAAGGCAGCTTGTCCCTTCGCAGCAAACTCTaGGGCCAGCTGAAGGTCGGA +
Preference number: 4 (lower is better)
Translates to: PVTTASRSGVPSSKGSLSLRSKL*GQLKVG
Trigger: TCCGACCTTCAGCTGGCCGCAGAGTTTGCTGCGAAG...GGACAAGCTGCCTTTGCTGGAAGGGACTCCAGACCTGGAGGCTGTGGTCACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS-3UTR CCA 90 bp GAAAGACTGACGAGCCCAGGCCGGCTTCCTGCCTCATCCTTCGTGAGATCCTGGAAGCTGAGCTGCAGGTaGCGCCGGGAAATGAAGCTC +
Preference number: 4 (lower is better)
Translates to: ERLTSPGRLPASSFVRSWKLSCR*RREMKL
Trigger: GAGCTTCATTTCCCGGCGCCACCTGCAGCTCAGCTT...CCAGGATCTCACGAAGGATGAGGCAGGAAGCCGGCCTGGGCTCGTCAGTCTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000198422.2
CDS-3UTR CCA 90 bp TCTTCCTGCCGCATACCACCCACCATCCATCATCCTCCTGCTGAGCAAGTGGCTCGGAAGGTGCATTGTTaGGGTAGCTGCAGGGCGGGC +
Preference number: 4 (lower is better)
Translates to: SSCRIPPTIHHPPAEQVARKVHC*GSCRAG
Trigger: GCCCGCCCTGCAGCTACCCCAACAATGCACCTTCCG...AGCCACTTGCTCAGCAGGAGGATGATGGATGGTGGGTGGTATGCGGCAGGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS-3UTR CCA 90 bp AGCTTGGACTTATCCATCCCGGTCATCTGCTCTCCTGTGACCACAGCCTCCAGGCCGAGACAGGCACTCTaGGGTCTGCAGGCCACTGGA +
Preference number: 4 (lower is better)
Translates to: SLDLSIPVICSPVTTASRPRQAL*GLQATG
Trigger: TCCAGTGGCCTGCAGACCCCAGAGTGCCTGTCTCGG...CCTGGAGGCTGTGGTCACAGGAGAGCAGATGACCGGGATGGATAAGTCCAAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS-3UTR CCA 90 bp CCCACCATCCATCATCCTCCTGCTGAGCAAGTGGCTGACCGACTTCCCTTGCAGACTCCTGGGGCCATCTaGCTGGCGACCGTCTGGATA +
Preference number: 4 (lower is better)
Translates to: PTIHHPPAEQVADRLPLQTPGAI*LATVWI
Trigger: TATCCAGACGGTCGCCAGCCAGATGGCCCCAGGAGT...CTGCAAGGGAAGTCGGTCAGCCACTTGCTCAGCAGGAGGATGATGGATGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CAA 72 bp CATCCTCCTGCTGAGCAAGTGGCTGACCGACTTCCCTaGCAGCTGGCTCAGGCTTCCCTGGAGATCCGTTTG +
Preference number: 4 (lower is better)
Translates to: HPPAEQVADRLP*QLAQASLEIRL
Trigger: CAAACGGATCTCCAGGGAAGCCTGAGCCAGCTGCAAGGGAAGTCGGTCAGCCACTTGCTCAGCAGGAGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CAA 72 bp CCCCGGGCGTCCAAGTCCTCAGCTGACACCCACGCTTaGGTTCTTGCTGCACTGTACTCAAACTTGGCACCG +
Preference number: 4 (lower is better)
Translates to: PRASKSSADTHA*VLAALYSNLAP
Trigger: CGGTGCCAAGTTTGAGTACAGTGCAGCAAGAACCAAAGCGTGGGTGTCAGCTGAGGACTTGGACGCCCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CAA 72 bp ATACCAACGACAGGGCCTGGGGCTCTGTCCAAGTTGTaGCCAGCTGCTTACCGACCACCCTCTAGGAGGACC +
Preference number: 4 (lower is better)
Translates to: IPTTGPGALSKL*PAAYRPPSRRT
Trigger: GGTCCTCCTAGAGGGTGGTCGGTAAGCAGCTGGCAACAACTTGGACAGAGCCCCAGGCCCTGTCGTTGGTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS-3UTR TCA 90 bp CCATCTCTGGAACTCGGATTCCCATCGTATTGGGTACCACTGCTTTTAAAGCACTCACCGGCTGGGCGCTaGCAGGGGAGCCTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: PSLELGFPSYWVPLLLKHSPAGR*QGSLGH
Trigger: GTGCCCCAGGCTCCCCTGTCAGCGCCCAGCCGGTGA...GTGCTTTAAAAGCAGTGGTACCCAATACGATGGGAATCCGAGTTCCAGAGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS-3UTR GCA 90 bp CCCACCATCCATCATCCTCCTGCTGAGCAAGTGGCTGACCGACTTCCCTTGCAGGCGTGGCCTGAGGGCTaGTGTGAGGTCACTATGGAA +
Preference number: 4 (lower is better)
Translates to: PTIHHPPAEQVADRLPLQAWPEG*CEVTME
Trigger: TTCCATAGTGACCTCACAGCAGCCCTCAGGCCACGC...CTGCAAGGGAAGTCGGTCAGCCACTTGCTCAGCAGGAGGATGATGGATGGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS-3UTR GCA 90 bp CCTGTGACCACAGCCTCCAGGTCTGGAGTCCCTTCCAGCAAAGGCAGCTTGTCCACCGGAAGGTGGTGCTaGCCGATAGTCACTGGTGTA +
Preference number: 4 (lower is better)
Translates to: PVTTASRSGVPSSKGSLSTGRWC*PIVTGV
Trigger: TACACCAGTGACTATCGGGCAGCACCACCTTCCGGT...GGACAAGCTGCCTTTGCTGGAAGGGACTCCAGACCTGGAGGCTGTGGTCACAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS-3UTR CCA 90 bp TTTGATACCAACGACAGGGCCTGGGGCTCTGTCCAAGTTGTTGCCAGCTGCTTAGCCATGATCACCGGCTaGGCGCTGACAGGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: FDTNDRAWGSVQVVASCLAMITG*ALTGEP
Trigger: AGGCTCCCCTGTCAGCGCCCAGCCGGTGATCATGGC...TAAGCAGCTGGCAACAACTTGGACAGAGCCCCAGGCCCTGTCGTTGGTATCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS-3UTR TCA 90 bp TTAATGGTGAAGATCTGCCTCAGAGCACGGAGCCCACGTTTCAGGAACTGGGACAGTTGCGGCCGATGGTaGCGCTGGGCTGTCGCATCA +
Preference number: 4 (lower is better)
Translates to: LMVKICLRARSPRFRNWDSCGRW*RWAVAS
Trigger: TGATGCGACAGCCCAGCGTCACCATCGGCCGCAACT...GTCCCAGTTCCTGAAACGTGGGCTCCGTGCTCTGAGGCAGATCTTCACCATTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS-3UTR GCA 90 bp TATTATCAGGGATCCCAAATGCCCCTCCCACCCAGGAAGGACGTTAAGAGGAGAGAGGCCCGAAGGGGGTaGGGAAGCAGGAGACACCTC +
Preference number: 4 (lower is better)
Translates to: YYQGSQMPLPPRKDVKRREARRG*GSRRHL
Trigger: GAGGTGTCTCCTGCTTCCGCACCCCCTTCGGGCCTC...TCTCCTCTTAACGTCCTTCCTGGGTGGGAGGGGCATTTGGGATCCCTGATAATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS-3UTR CCA 90 bp TCTAAGCAGGCACTGTGCAGTTCGGATGGGGAGGGAGGGACTGGGCGAGCAATGGCTGTGAGGTCACTATaGAAGCTGGCATGTAGGCGA +
Preference number: 4 (lower is better)
Translates to: SKQALCSSDGEGGTGRAMAVRSL*KLACRR
Trigger: TCGCCTACATGCCAGCTTCCATAGTGACCTCACAGC...CATTGCTCGCCCAGTCCCTCCCTCCCCATCCGAACTGCACAGTGCCTGCTTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CAA 72 bp TTGATACCAACGACAGGGCCTGGGGCTCTGTCCAAGTaGTTGCCAGCTGCTTACCGACCACCCTCTAGGAGG +
Preference number: 4 (lower is better)
Translates to: LIPTTGPGALSK*LPAAYRPPSRR
Trigger: CCTCCTAGAGGGTGGTCGGTAAGCAGCTGGCAACAACTTGGACAGAGCCCCAGGCCCTGTCGTTGGTATCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS-3UTR CCA 90 bp GCAGGAGACCTCCAAAACACTGGCTTGAAGCCGAGTACTACAGAAATGACTGGCCAGTGGGGAGATCTGTaGGTAGAGTGGCCGCAGGGG +
Preference number: 4 (lower is better)
Translates to: AGDLQNTGLKPSTTEMTGQWGDL*VEWPQG
Trigger: CCCCTGCGGCCACTCTACCCACAGATCTCCCCACTG...GCCAGTCATTTCTGTAGTACTCGGCTTCAAGCCAGTGTTTTGGAGGTCTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS-3UTR CCA 90 bp CCCACACATGAGGGACCTTTCACTAGAGCTGAGACGCCACCCCTTTCTGACTTAACTGATGGTGCCGGTTaGGGAAGGGATGGGGCTGAC +
Preference number: 4 (lower is better)
Translates to: PTHEGPFTRAETPPLSDLTDGAG*GRDGAD
Trigger: GTCAGCCCCATCCCTTCCCCAACCGGCACCATCAGT...TAAGTCAGAAAGGGGTGGCGTCTCAGCTCTAGTGAAAGGTCCCTCATGTGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS-3UTR CCA 90 bp CCAAAGCAGATCTCCCTGACCCCAGTTAATGCCACAGTCTCTGTCACTTTTGGGGCTTCGACTCGTCCTTaGGGCTGTCTCCGCCAGACG +
Preference number: 4 (lower is better)
Translates to: PKQISLTPVNATVSVTFGASTRP*GCLRQT
Trigger: CGTCTGGCGGAGACAGCCCCAAGGACGAGTCGAAGC...CCCAAAAGTGACAGAGACTGTGGCATTAACTGGGGTCAGGGAGATCTGCTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS-3UTR CCA 90 bp CTGCCTACAAAAGGGAACCTCAGAGACACATGGTCTGCTCTGTGTGTCTCAGGTCCTGGGCTGAGGAGATaGCCTGCACGATCAGCTGCG +
Preference number: 4 (lower is better)
Translates to: LPTKGNLRDTWSALCVSGPGLRR*PARSAA
Trigger: CGCAGCTGATCGTGCAGGCCATCTCCTCAGCCCAGG...ACCTGAGACACACAGAGCAGACCATGTGTCTCTGAGGTTCCCTTTTGTAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS-3UTR CCA 90 bp ATCACCCCAGAAATTCAGGAAGCTGAGGCAAGAGGACTGGGAGTTCAAGGCCAGCGGGATCATGTGGAATaGGGGAGCCCTCCCGAGACA +
Preference number: 4 (lower is better)
Translates to: ITPEIQEAEARGLGVQGQRDHVE*GSPPET
Trigger: TGTCTCGGGAGGGCTCCCCCATTCCACATGATCCCG...CTGGCCTTGAACTCCCAGTCCTCTTGCCTCAGCTTCCTGAATTTCTGGGGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS-3UTR CCA 90 bp CCCACACATGAGGGACCTTTCACTAGAGCTGAGACGCCACCCCTTTCTGACTTAGTGGATGAACTTGCCTaGGCTGCCAGGAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PTHEGPFTRAETPPLSDLVDELA*AARSCR
Trigger: CCTGCAGCTCCTGGCAGCCCAGGCAAGTTCATCCAC...TAAGTCAGAAAGGGGTGGCGTCTCAGCTCTAGTGAAAGGTCCCTCATGTGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CAA 72 bp AGCTGGCTCAGGCTTCCCTGGAGATCCGTTTGTAGCTaGCAGCTCTCGACTCATTCAGTGCTGTGGGCACTG +
Preference number: 4 (lower is better)
Translates to: SWLRLPWRSVCS*QLSTHSVLWAL
Trigger: CAGTGCCCACAGCACTGAATGAGTCGAGAGCTGCAAGCTACAAACGGATCTCCAGGGAAGCCTGAGCCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CAA 72 bp GAAGCCGAGTACTACAGAAATGACTGGCTGGGGAGCTaGGGAGATAGCTCAAGAGAGGAGGCAGGTGCTCCG +
Preference number: 4 (lower is better)
Translates to: EAEYYRNDWLGS*GDSSREEAGAP
Trigger: CGGAGCACCTGCCTCCTCTCTTGAGCTATCTCCCAAGCTCCCCAGCCAGTCATTTCTGTAGTACTCGGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS-3UTR GCA 90 bp AGCTTGGACTTATCCATCCCGGTCATCTGCTCTCCTGTGACCACAGCCTCCAGGCGAAGACGCCGTTCTTaGCGAGACAGCGAAGATAGA +
Preference number: 4 (lower is better)
Translates to: SLDLSIPVICSPVTTASRRRRRS*RDSEDR
Trigger: TCTATCTTCGCTGTCTCGGCAAGAACGGCGTCTTCG...CCTGGAGGCTGTGGTCACAGGAGAGCAGATGACCGGGATGGATAAGTCCAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS-3UTR CCA 90 bp CCATCTCTGGAACTCGGATTCCCATCGTATTGGGTACCACTGCTTTTAAAGCACGCCTGCTGGACCACATaGATGGCGTGGCCTGAGGGC +
Preference number: 4 (lower is better)
Translates to: PSLELGFPSYWVPLLLKHACWTT*MAWPEG
Trigger: GCCCTCAGGCCACGCCATCCATGTGGTCCAGCAGGC...GTGCTTTAAAAGCAGTGGTACCCAATACGATGGGAATCCGAGTTCCAGAGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS-3UTR CCA 90 bp ATCACCCCAGAAATTCAGGAAGCTGAGGCAAGAGGACTGGGAGTTCAAGGCCAGCCAGGATGTACCCGTTaGCTGAGTTGGCAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: ITPEIQEAEARGLGVQGQPGCTR*LSWQRW
Trigger: CCACCTCTGCCAACTCAGCCAACGGGTACATCCTGG...CTGGCCTTGAACTCCCAGTCCTCTTGCCTCAGCTTCCTGAATTTCTGGGGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CAA 72 bp CGTCCAAGTCCTCAGCTGACACCCACGCTTTGGTTCTaGCTGCACTGTACTCAAACTTGGCACCGACTGCTG +
Preference number: 4 (lower is better)
Translates to: RPSPQLTPTLWF*LHCTQTWHRLL
Trigger: CAGCAGTCGGTGCCAAGTTTGAGTACAGTGCAGCAAGAACCAAAGCGTGGGTGTCAGCTGAGGACTTGGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CAA 72 bp CTGGTGGCTTCAATGGCAGCAGCCATACATCGGAGCTaGGACTTATCCATCCCGGTCATCTGCTCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: LVASMAAAIHRS*DLSIPVICSPV
Trigger: CACAGGAGAGCAGATGACCGGGATGGATAAGTCCAAGCTCCGATGTATGGCTGCTGCCATTGAAGCCACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CAA 72 bp ATGGAGGGAAAGATCAGCAGCTGGCACCAACGTCCCTaGTCACCTCAGCCCACTACGCAACTCAGATCTCCA +
Preference number: 4 (lower is better)
Translates to: MEGKISSWHQRP*SPQPTTQLRSP
Trigger: TGGAGATCTGAGTTGCGTAGTGGGCTGAGGTGACAAGGGACGTTGGTGCCAGCTGCTGATCTTTCCCTCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS-3UTR TCA 90 bp CCACACATGAGGGACCTTTCACTAGAGCTGAGACGCCACCCCTTTCTGACTTATGCTTTCCATTCTGAGTaGCAGCCCGGACCGGAAGGT +
Preference number: 4 (lower is better)
Translates to: PHMRDLSLELRRHPFLTYAFHSE*QPGPEG
Trigger: ACCTTCCGGTCCGGGCTGTCACTCAGAATGGAAAGC...ATAAGTCAGAAAGGGGTGGCGTCTCAGCTCTAGTGAAAGGTCCCTCATGTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS-3UTR CCA 90 bp CGATGGCATGAGAGAGGGGTAAATAAACACACAGAACCCCCAGATTCATACAATGTGTCCGGGGACTCCTaGGGCCATCTGGCTGGCGAC +
Preference number: 4 (lower is better)
Translates to: RWHERGVNKHTEPPDSYNVSGDS*GHLAGD
Trigger: GTCGCCAGCCAGATGGCCCCAGGAGTCCCCGGACAC...ATTGTATGAATCTGGGGGTTCTGTGTGTTTATTTACCCCTCTCTCATGCCATCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS-3UTR CCA 90 bp CAGAGCACGGAGCCCACGTTTCAGGAACTGGGACAGCAACCTGCTCATGACCATAATGTGGATCTTCAGTaGGGAGATCTGTGGGTAGAG +
Preference number: 4 (lower is better)
Translates to: QSTEPTFQELGQQPAHDHNVDLQ*GDLWVE
Trigger: CTCTACCCACAGATCTCCCCACTGAAGATCCACATT...ATGGTCATGAGCAGGTTGCTGTCCCAGTTCCTGAAACGTGGGCTCCGTGCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS-3UTR CCA 90 bp CCAAAGCAGATCTCCCTGACCCCAGTTAATGCCACAGTCTCTGTCACTTTTGGGTGGCTGCGGGGATTGTaGCAAATGCTATGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: PKQISLTPVNATVSVTFGWLRGL*QMLWWA
Trigger: AGCCCACCATAGCATTTGCCACAATCCCCGCAGCCA...CCCAAAAGTGACAGAGACTGTGGCATTAACTGGGGTCAGGGAGATCTGCTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS-3UTR GCA 90 bp GTTTATGTGTTTGTTTCAAACCATGGGAGGACAGGAGATAAAAAGGAAACTGTCCGCATAGCACGGGGCTaGAGGGAGCCGAGCGCAGCG +
Preference number: 4 (lower is better)
Translates to: VYVFVSNHGRTGDKKETVRIARG*REPSAA
Trigger: CGCTGCGCTCGGCTCCCTGCAGCCCCGTGCTATGCG...GACAGTTTCCTTTTTATCTCCTGTCCTCCCATGGTTTGAAACAAACACATAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS-3UTR GCA 90 bp CTGCCTACAAAAGGGAACCTCAGAGACACATGGTCTGCTCTGTGTGTCTCAGGTTCTCCGCTTTCGGAATaGTTGTTCCACGAGCTTGGC +
Preference number: 4 (lower is better)
Translates to: LPTKGNLRDTWSALCVSGSPLSE*LFHELG
Trigger: GCCAAGCTCGTGGAACAAGCATTCCGAAAGCGGAGA...ACCTGAGACACACAGAGCAGACCATGTGTCTCTGAGGTTCCCTTTTGTAGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS-3UTR CCA 90 bp CCATCTCTGGAACTCGGATTCCCATCGTATTGGGTACCACTGCTTTTAAAGCACAAGCTGAGCTGCAGGTaGCGCCGGGAAATGAAGCTC +
Preference number: 4 (lower is better)
Translates to: PSLELGFPSYWVPLLLKHKLSCR*RREMKL
Trigger: GAGCTTCATTTCCCGGCGCCACCTGCAGCTCAGCTT...GTGCTTTAAAAGCAGTGGTACCCAATACGATGGGAATCCGAGTTCCAGAGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS-3UTR TCA 90 bp CCAAAGCAGATCTCCCTGACCCCAGTTAATGCCACAGTCTCTGTCACTTTTGGGAAGGGTAATGTTTGGTaGTGTGGGCGTAGATGCCAC +
Preference number: 4 (lower is better)
Translates to: PKQISLTPVNATVSVTFGKGNVW*CGRRCH
Trigger: GTGGCATCTACGCCCACATCACCAAACATTACCCTT...CCCAAAAGTGACAGAGACTGTGGCATTAACTGGGGTCAGGGAGATCTGCTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS-3UTR GCA 90 bp CGATGGCATGAGAGAGGGGTAAATAAACACACAGAACCCCCAGATTCATACAATAGCCCCTCGAGGACTTaGTGGACAGGAGTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: RWHERGVNKHTEPPDSYNSPSRT*WTGVGD
Trigger: GTCCCCAACTCCTGTCCAGCAAGTCCTCGAGGGGCT...ATTGTATGAATCTGGGGGTTCTGTGTGTTTATTTACCCCTCTCTCATGCCATCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS-3UTR CCA 90 bp ACCCCCACCACCTTTTCCCAGCCTAAGAATCAAGCTAAGGTATTATCAGGGATCCTTGTTCCACGAGCTTaGCTTCGGAGGCAGGGTCTA +
Preference number: 4 (lower is better)
Translates to: TPTTFSQPKNQAKVLSGILVPRA*LRRQGL
Trigger: TAGACCCTGCCTCCGAAGCCAAGCTCGTGGAACAAG...GATCCCTGATAATACCTTAGCTTGATTCTTAGGCTGGGAAAAGGTGGTGGGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS-3UTR CCA 90 bp CCCACACATGAGGGACCTTTCACTAGAGCTGAGACGCCACCCCTTTCTGACTTATGGCAAATGCTATGGTaGGCTTCTCTTCCAAACCTC +
Preference number: 4 (lower is better)
Translates to: PTHEGPFTRAETPPLSDLWQMLW*ASLPNL
Trigger: GAGGTTTGGAAGAGAAGCCCACCATAGCATTTGCCA...TAAGTCAGAAAGGGGTGGCGTCTCAGCTCTAGTGAAAGGTCCCTCATGTGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS-3UTR GCA 90 bp ACCCCCACCACCTTTTCCCAGCCTAAGAATCAAGCTAAGGTATTATCAGGGATCGGGGATTGTGGCAAATaGTATGGTGGGCTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: TPTTFSQPKNQAKVLSGIGDCGK*YGGLLF
Trigger: GAAGAGAAGCCCACCATAGCATTTGCCACAATCCCC...GATCCCTGATAATACCTTAGCTTGATTCTTAGGCTGGGAAAAGGTGGTGGGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS-3UTR CCA 90 bp GTTTATGTGTTTGTTTCAAACCATGGGAGGACAGGAGATAAAAAGGAAACTGTCGCTGGACCACATGGATaGCGTGGCCTGAGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: VYVFVSNHGRTGDKKETVAGPHG*RGLRAA
Trigger: AGCAGCCCTCAGGCCACGCCATCCATGTGGTCCAGC...GACAGTTTCCTTTTTATCTCCTGTCCTCCCATGGTTTGAAACAAACACATAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS-3UTR CCA 90 bp GTTTATGTGTTTGTTTCAAACCATGGGAGGACAGGAGATAAAAAGGAAACTGTCCAAGTCGGGATCATGTaGAATGGGGGAGCCCTCCCG +
Preference number: 4 (lower is better)
Translates to: VYVFVSNHGRTGDKKETVQVGIM*NGGALP
Trigger: CGGGAGGGCTCCCCCATTCCACATGATCCCGACTTG...GACAGTTTCCTTTTTATCTCCTGTCCTCCCATGGTTTGAAACAAACACATAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS-3UTR CCA 90 bp AATTATCATTCAGTTAAGAAAAAGAACCGCCTCACTATTGGCTTTAGCCCCTCCTCCGGCTCCGGAATGTaGATCTTCAGTGGGGAGATC +
Preference number: 4 (lower is better)
Translates to: NYHSVKKKNRLTIGFSPSSGSGM*IFSGEI
Trigger: GATCTCCCCACTGAAGATCCACATTCCGGAGCCGGA...GGAGGGGCTAAAGCCAATAGTGAGGCGGTTCTTTTTCTTAACTGAATGATAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS-3UTR CCA 90 bp CCATCTCTGGAACTCGGATTCCCATCGTATTGGGTACCACTGCTTTTAAAGCACTTGTGGCAAATGCTATaGTGGGCTTCTCTTCCAAAC +
Preference number: 4 (lower is better)
Translates to: PSLELGFPSYWVPLLLKHLWQML*WASLPN
Trigger: GTTTGGAAGAGAAGCCCACCATAGCATTTGCCACAA...GTGCTTTAAAAGCAGTGGTACCCAATACGATGGGAATCCGAGTTCCAGAGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CAA 72 bp ATTATCATTCAGTTAAGAAAAAGAACCGCCTCACTATaGGCTTTAGCCCCTCCCTCACACGTGCACAGCTGC +
Preference number: 4 (lower is better)
Translates to: IIIQLRKRTASL*ALAPPSHVHSC
Trigger: GCAGCTGTGCACGTGTGAGGGAGGGGCTAAAGCCAATAGTGAGGCGGTTCTTTTTCTTAACTGAATGATAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CAA 72 bp GCACGTCCCATCTCTGGAACTCGGATTCCCATCGTATaGGGTACCACTGCTTTTAAAGCACTAAGTGTTAAA +
Preference number: 4 (lower is better)
Translates to: ARPISGTRIPIV*GTTAFKALSVK
Trigger: TTTAACACTTAGTGCTTTAAAAGCAGTGGTACCCAATACGATGGGAATCCGAGTTCCAGAGATGGGACGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CAA 72 bp AGCCAGCAAATTCAGACTCAGAAGCCAAGGTGCCATTaGGATACATACAGGACAGAGAACATGAACATTCAG +
Preference number: 4 (lower is better)
Translates to: SQQIQTQKPRCH*DTYRTENMNIQ
Trigger: CTGAATGTTCATGTTCTCTGTCCTGTATGTATCCAAATGGCACCTTGGCTTCTGAGTCTGAATTTGCTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CAA 72 bp TATAAAATCAACTCTCATTCTCACAGAGAGAAACATTaGATGGCTCCTGCTCACGAGACTTGGTGTGGTGTA +
Preference number: 4 (lower is better)
Translates to: YKINSHSHREKH*MAPAHETWCGV
Trigger: TACACCACACCAAGTCTCGTGAGCAGGAGCCATCAAATGTTTCTCTCTGTGAGAATGAGAGTTGATTTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
3UTR CAA 72 bp ATAAACACACAGAACCCCCAGATTCATACAATCAAGTaGTCTGTACGTGTTTATGTGTTTGTTTCAAACCAT +
Preference number: 4 (lower is better)
Translates to: INTQNPQIHTIK*SVRVYVFVSNH
Trigger: ATGGTTTGAAACAAACACATAAACACGTACAGACAACTTGATTGTATGAATCTGGGGGTTCTGTGTGTTTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS TCA 90 bp TGTGGTAGTGGAGGCGGCTGGGGTTGGCGCTGCATTAGCGGCTACTaGGACGGCTGCTGCTGGCTCCTCAGGCCCCACCTCACACACCCG +
Preference number: 5 (lower is better)
Translates to: CGSGGGWGWRCISGY*DGCCWLLRPHLTHP
Trigger: CGGGTGTGTGAGGTGGGGCCTGAGGAGCCAGCAGCAGCCGTCTCAGTAGCCGCTAATGCAGCGCCAACCCCAGCCGCCTCCACTACCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS GCA 90 bp CGGTGGCTTCGACTCGTCCTTGGGGCTGTCTCCGCCAGACGCATCTaGTTGCTGCTCGGAGGCGGCCTTCGCAGCAAACTCTGCGGCCAG +
Preference number: 5 (lower is better)
Translates to: RWLRLVLGAVSARRI*LLLGGGLRSKLCGQ
Trigger: CTGGCCGCAGAGTTTGCTGCGAAGGCCGCCTCCGAGCAGCAAGCAGATGCGTCTGGCGGAGACAGCCCCAAGGACGAGTCGAAGCCACCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS CCA 90 bp GCTGACGAGGCTCCGGAGATCCGGCTCCGGAATGTGGATCTTCAGTaGGGAGATCTGTGGGTAGAGTGGCCGCAGGGGCGATGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: ADEAPEIRLRNVDLQ*GDLWVEWPQGRCWG
Trigger: GCCCCAGCATCGCCCCTGCGGCCACTCTACCCACAGATCTCCCCACTGAAGATCCACATTCCGGAGCCGGATCTCCGGAGCCTCGTCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS CCA 90 bp TCTGGGGTCTGCAGGCCACTGGAACGAGGGGACATCAGCCCTGGGTaGGTGGGTGAAGCTGGAGCACTCCGTGAGGACAGAGGCCCGAAG +
Preference number: 5 (lower is better)
Translates to: SGVCRPLERGDISPG*VGEAGALREDRGPK
Trigger: CTTCGGGCCTCTGTCCTCACGGAGTGCTCCAGCTTCACCCACCCACCCAGGGCTGATGTCCCCTCGTTCCAGTGGCCTGCAGACCCCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS CCA 90 bp CGAGCCTCATTGCCCAGGTCCAACACGGCTGTGCCTGCTGTGTCGTaGGAGGTCCCAGTCGAGCCCTGGCTAGCCAGGATGTACCCGTTG +
Preference number: 5 (lower is better)
Translates to: RASLPRSNTAVPAVS*EVPVEPWLARMYPL
Trigger: CAACGGGTACATCCTGGCTAGCCAGGGCTCGACTGGGACCTCCCACGACACAGCAGGCACAGCCGTGTTGGACCTGGGCAATGAGGCTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS GCA 90 bp TTGGCAGAGGTGGTAACCACCCTCACCATGGTGACGGTAGGGGCCTaGTGGACCACATGGATGGCGTGGCCTGAGGGCTGCTGTGAGGTC +
Preference number: 5 (lower is better)
Translates to: LAEVVTTLTMVTVGA*WTTWMAWPEGCCEV
Trigger: GACCTCACAGCAGCCCTCAGGCCACGCCATCCATGTGGTCCAGCAGGCCCCTACCGTCACCATGGTGAGGGTGGTTACCACCTCTGCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS CCA 90 bp GCAGAGGTGGTAACCACCCTCACCATGGTGACGGTAGGGGCCTGCTaGACCACATGGATGGCGTGGCCTGAGGGCTGCTGTGAGGTCACT +
Preference number: 5 (lower is better)
Translates to: AEVVTTLTMVTVGAC*TTWMAWPEGCCEVT
Trigger: AGTGACCTCACAGCAGCCCTCAGGCCACGCCATCCATGTGGTCCAGCAGGCCCCTACCGTCACCATGGTGAGGGTGGTTACCACCTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS TCA 90 bp GGAGGTCCCAGTCGAGCCCTGGCTAGCCAGGATGTACCCGTTGGCTaGGTTGGCAGAGGTGGTAACCACCCTCACCATGGTGACGGTAGG +
Preference number: 5 (lower is better)
Translates to: GGPSRALASQDVPVG*VGRGGNHPHHGDGR
Trigger: CCTACCGTCACCATGGTGAGGGTGGTTACCACCTCTGCCAACTCAGCCAACGGGTACATCCTGGCTAGCCAGGGCTCGACTGGGACCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS GCA 90 bp TTCCAAACCTCGAGCCTCATTGCCCAGGTCCAACACGGCTGTGCCTaGTGTGTCGTGGGAGGTCCCAGTCGAGCCCTGGCTAGCCAGGAT +
Preference number: 5 (lower is better)
Translates to: FQTSSLIAQVQHGCA*CVVGGPSRALASQD
Trigger: ATCCTGGCTAGCCAGGGCTCGACTGGGACCTCCCACGACACAGCAGGCACAGCCGTGTTGGACCTGGGCAATGAGGCTCGAGGTTTGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS GCA 90 bp TGGGTGAAGCTGGAGCACTCCGTGAGGACAGAGGCCCGAAGGGGGTaGGGAAGCAGGAGACACCTCTCTGTCTCCGCTTTCGGAATGCTT +
Preference number: 5 (lower is better)
Translates to: WVKLEHSVRTEARRG*GSRRHLSVSAFGML
Trigger: AAGCATTCCGAAAGCGGAGACAGAGAGGTGTCTCCTGCTTCCGCACCCCCTTCGGGCCTCTGTCCTCACGGAGTGCTCCAGCTTCACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS CCA 90 bp GTAACCACCCTCACCATGGTGACGGTAGGGGCCTGCTGGACCACATaGATGGCGTGGCCTGAGGGCTGCTGTGAGGTCACTATGGAAGCT +
Preference number: 5 (lower is better)
Translates to: VTTLTMVTVGACWTT*MAWPEGCCEVTMEA
Trigger: AGCTTCCATAGTGACCTCACAGCAGCCCTCAGGCCACGCCATCCATGTGGTCCAGCAGGCCCCTACCGTCACCATGGTGAGGGTGGTTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS-3UTR CAA 90 bp TCTAAGCAGGCACTGTGCAGTTCGGATGGGGAGGGAGGGACTGGGCGAGCAATGGCCAGGATGTACCCGTaGGCTGAGTTGGCAGAGGTG +
Preference number: 5 (lower is better)
Translates to: SKQALCSSDGEGGTGRAMARMYP*AELAEV
Trigger: CACCTCTGCCAACTCAGCCAACGGGTACATCCTGGC...CATTGCTCGCCCAGTCCCTCCCTCCCCATCCGAACTGCACAGTGCCTGCTTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS GCA 90 bp GGGGGTGCGGAAGCAGGAGACACCTCTCTGTCTCCGCTTTCGGAATaGTTGTTCCACGAGCTTGGCTTCGGAGGCAGGGTCTATTCGCCA +
Preference number: 5 (lower is better)
Translates to: GGAEAGDTSLSPLSE*LFHELGFGGRVYSP
Trigger: TGGCGAATAGACCCTGCCTCCGAAGCCAAGCTCGTGGAACAAGCATTCCGAAAGCGGAGACAGAGAGGTGTCTCCTGCTTCCGCACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS GCA 90 bp TCCTGGGGCCATCTGGCTGGCGACCGTCTGGATAACTCGGCTGGCTaGGGGGATTGTGGCAAATGCTATGGTGGGCTTCTCTTCCAAACC +
Preference number: 5 (lower is better)
Translates to: SWGHLAGDRLDNSAG*GDCGKCYGGLLFQT
Trigger: GGTTTGGAAGAGAAGCCCACCATAGCATTTGCCACAATCCCCGCAGCCAGCCGAGTTATCCAGACGGTCGCCAGCCAGATGGCCCCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS TCA 90 bp GAGTGGATGAACTTGCCTGGGCTGCCAGGAGCTGCAGGGGGCTGCTaGGGGCATAAGCATTGCCAGTCAAGCTATTCGTGGGTACAGCGT +
Preference number: 5 (lower is better)
Translates to: EWMNLPGLPGAAGGC*GHKHCQSSYSWVQR
Trigger: ACGCTGTACCCACGAATAGCTTGACTGGCAATGCTTATGCCCTCAGCAGCCCCCTGCAGCTCCTGGCAGCCCAGGCAAGTTCATCCACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS CCA 90 bp CGGCCAGCTGAAGGTCGGAGGTCACATTCTGGACAAAGCGATAACTaGATGACCCAGCCCCTCGAGGACTTGCTGGACAGGAGTTGGGGA +
Preference number: 5 (lower is better)
Translates to: RPAEGRRSHSGQSDN*MTQPLEDLLDRSWG
Trigger: TCCCCAACTCCTGTCCAGCAAGTCCTCGAGGGGCTGGGTCATCCAGTTATCGCTTTGTCCAGAATGTGACCTCCGACCTTCAGCTGGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS-3UTR CAA 90 bp TGGGTCCGCAGGCCTTTCTTACCCCTGCCTCCAGAGTGGGACCTTCGCTCACTGCGGTTAAGAGAGAGGTaGTGTCGGATAGAGTTCTGC +
Preference number: 5 (lower is better)
Translates to: WVRRPFLPLPPEWDLRSLRLRER*CRIEFC
Trigger: GCAGAACTCTATCCGACACAACCTCTCTCTTAACCG...CAGTGAGCGAAGGTCCCACTCTGGAGGCAGGGGTAAGAAAGGCCTGCGGACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS-3UTR CAA 90 bp TTTGATACCAACGACAGGGCCTGGGGCTCTGTCCAAGTTGTTGCCAGCTGCTTATCTACCCGGGACCTCTaGACCTCGGGCTCTCCGCTA +
Preference number: 5 (lower is better)
Translates to: FDTNDRAWGSVQVVASCLSTRDL*TSGSPL
Trigger: TAGCGGAGAGCCCGAGGTCAAGAGGTCCCGGGTAGA...TAAGCAGCTGGCAACAACTTGGACAGAGCCCCAGGCCCTGTCGTTGGTATCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS TCA 90 bp CAGCTGAAGGTCGGAGGTCACATTCTGGACAAAGCGATAACTGGATaGCCCAGCCCCTCGAGGACTTGCTGGACAGGAGTTGGGGACACT +
Preference number: 5 (lower is better)
Translates to: QLKVGGHILDKAITG*PSPSRTCWTGVGDT
Trigger: AGTGTCCCCAACTCCTGTCCAGCAAGTCCTCGAGGGGCTGGGTCATCCAGTTATCGCTTTGTCCAGAATGTGACCTCCGACCTTCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS TCA 90 bp GCATTGCCAGTCAAGCTATTCGTGGGTACAGCGTGCTTTCCATTCTaGGTGACAGCCCGGACCGGAAGGTGGTGCTGCCCGATAGTCACT +
Preference number: 5 (lower is better)
Translates to: ALPVKLFVGTACFPF*VTARTGRWCCPIVT
Trigger: AGTGACTATCGGGCAGCACCACCTTCCGGTCCGGGCTGTCACTCAGAATGGAAAGCACGCTGTACCCACGAATAGCTTGACTGGCAATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS CCA 90 bp AGACACCTCTCTGTCTCCGCTTTCGGAATGCTTGTTCCACGAGCTTaGCTTCGGAGGCAGGGTCTATTCGCCAAAAAGAGCCCTTCCCAG +
Preference number: 5 (lower is better)
Translates to: RHLSVSAFGMLVPRA*LRRQGLFAKKSPSQ
Trigger: CTGGGAAGGGCTCTTTTTGGCGAATAGACCCTGCCTCCGAAGCCAAGCTCGTGGAACAAGCATTCCGAAAGCGGAGACAGAGAGGTGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS-3UTR CAA 90 bp TATTATCAGGGATCCCAAATGCCCCTCCCACCCAGGAAGGACGTTAAGAGGAGAGCTTGTTCCACGAGCTaGGCTTCGGAGGCAGGGTCT +
Preference number: 5 (lower is better)
Translates to: YYQGSQMPLPPRKDVKRRACSTS*ASEAGS
Trigger: AGACCCTGCCTCCGAAGCCAAGCTCGTGGAACAAGC...TCTCCTCTTAACGTCCTTCCTGGGTGGGAGGGGCATTTGGGATCCCTGATAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS-3UTR CAA 90 bp CCAAAGCAGATCTCCCTGACCCCAGTTAATGCCACAGTCTCTGTCACTTTTGGGGGCTTAGCCACTAGGTaGGAAGGTCGGGGAGGGACA +
Preference number: 5 (lower is better)
Translates to: PKQISLTPVNATVSVTFGGLATR*EGRGGT
Trigger: TGTCCCTCCCCGACCTTCCAACCTAGTGGCTAAGCC...CCCAAAAGTGACAGAGACTGTGGCATTAACTGGGGTCAGGGAGATCTGCTTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS-3UTR CAA 90 bp GCAGGAGACCTCCAAAACACTGGCTTGAAGCCGAGTACTACAGAAATGACTGGCCTGGAGTGGATGAACTaGCCTGGGCTGCCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: AGDLQNTGLKPSTTEMTGLEWMN*PGLPGA
Trigger: AGCTCCTGGCAGCCCAGGCAAGTTCATCCACTCCAG...GCCAGTCATTTCTGTAGTACTCGGCTTCAAGCCAGTGTTTTGGAGGTCTCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS-3UTR CAA 90 bp ATCACCCCAGAAATTCAGGAAGCTGAGGCAAGAGGACTGGGAGTTCAAGGCCAGGATGTGAACTGGATCTaGATGGCCGTGCTCGGGAAC +
Preference number: 5 (lower is better)
Translates to: ITPEIQEAEARGLGVQGQDVNWI*MAVLGN
Trigger: GTTCCCGAGCACGGCCATCAAGATCCAGTTCACATC...CTGGCCTTGAACTCCCAGTCCTCTTGCCTCAGCTTCCTGAATTTCTGGGGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS-3UTR CAA 90 bp CCAAAGCAGATCTCCCTGACCCCAGTTAATGCCACAGTCTCTGTCACTTTTGGGCCGCTTTCGGAATGCTaGTTCCACGAGCTTGGCTTC +
Preference number: 5 (lower is better)
Translates to: PKQISLTPVNATVSVTFGPLSEC*FHELGF
Trigger: GAAGCCAAGCTCGTGGAACAAGCATTCCGAAAGCGG...CCCAAAAGTGACAGAGACTGTGGCATTAACTGGGGTCAGGGAGATCTGCTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS-3UTR CAA 90 bp ACCCCCACCACCTTTTCCCAGCCTAAGAATCAAGCTAAGGTATTATCAGGGATCAAACCTCGAGCCTCATaGCCCAGGTCCAACACGGCT +
Preference number: 5 (lower is better)
Translates to: TPTTFSQPKNQAKVLSGIKPRAS*PRSNTA
Trigger: AGCCGTGTTGGACCTGGGCAATGAGGCTCGAGGTTT...GATCCCTGATAATACCTTAGCTTGATTCTTAGGCTGGGAAAAGGTGGTGGGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS GCA 72 bp TCACTCGCCGGTCCCCGGGCCCTGAGGGCCGGTGGCTaGCATAGCTGTGGGCTGTGTGGTGGCTGTCCCACC +
Preference number: 6 (lower is better)
Translates to: SLAGPRALRAGG*HSCGLCGGCPT
Trigger: GGTGGGACAGCCACCACACAGCCCACAGCTATGGCAGCCACCGGCCCTCAGGGCCCGGGGACCGGCGAGTGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS GCA 72 bp GTGCTCGGGAACCGGAAGGTGCATTGTTGGGGTAGCTaGAGGGCGGGCGCTCCGCGCCTCTGGAAGGCCCCG +
Preference number: 6 (lower is better)
Translates to: VLGNRKVHCWGS*RAGAPRLWKAP
Trigger: CGGGGCCTTCCAGAGGCGCGGAGCGCCCGCCCTGCAGCTACCCCAACAATGCACCTTCCGGTTCCCGAGCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS GCA 72 bp TCCTTGGGGCTGTCTCCGCCAGACGCATCTGCTTGCTaGTCGGAGGCGGCCTTCGCAGCAAACTCTGCGGCC +
Preference number: 6 (lower is better)
Translates to: SLGLSPPDASAC*SEAAFAANSAA
Trigger: GGCCGCAGAGTTTGCTGCGAAGGCCGCCTCCGAGCAGCAAGCAGATGCGTCTGGCGGAGACAGCCCCAAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS CAA 90 bp TGGCTTCGACTCGTCCTTGGGGCTGTCTCCGCCAGACGCATCTGCTaGCTGCTCGGAGGCGGCCTTCGCAGCAAACTCTGCGGCCAGCTG +
Preference number: 6 (lower is better)
Translates to: WLRLVLGAVSARRIC*LLGGGLRSKLCGQL
Trigger: CAGCTGGCCGCAGAGTTTGCTGCGAAGGCCGCCTCCGAGCAGCAAGCAGATGCGTCTGGCGGAGACAGCCCCAAGGACGAGTCGAAGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS GCA 72 bp TCGTCCTTGGGGCTGTCTCCGCCAGACGCATCTGCTTaGTGCTCGGAGGCGGCCTTCGCAGCAAACTCTGCG +
Preference number: 6 (lower is better)
Translates to: SSLGLSPPDASA*CSEAAFAANSA
Trigger: CGCAGAGTTTGCTGCGAAGGCCGCCTCCGAGCAGCAAGCAGATGCGTCTGGCGGAGACAGCCCCAAGGACGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS GCA 72 bp GTGGTAACCACCCTCACCATGGTGACGGTAGGGGCCTaGTGGACCACATGGATGGCGTGGCCTGAGGGCTGC +
Preference number: 6 (lower is better)
Translates to: VVTTLTMVTVGA*WTTWMAWPEGC
Trigger: GCAGCCCTCAGGCCACGCCATCCATGTGGTCCAGCAGGCCCCTACCGTCACCATGGTGAGGGTGGTTACCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS GCA 72 bp TCGAGCCTCATTGCCCAGGTCCAACACGGCTGTGCCTaGTGTGTCGTGGGAGGTCCCAGTCGAGCCCTGGCT +
Preference number: 6 (lower is better)
Translates to: SSLIAQVQHGCA*CVVGGPSRALA
Trigger: AGCCAGGGCTCGACTGGGACCTCCCACGACACAGCAGGCACAGCCGTGTTGGACCTGGGCAATGAGGCTCGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS CCA 72 bp TTGCCCAGGTCCAACACGGCTGTGCCTGCTGTGTCGTaGGAGGTCCCAGTCGAGCCCTGGCTAGCCAGGATG +
Preference number: 6 (lower is better)
Translates to: LPRSNTAVPAVS*EVPVEPWLARM
Trigger: CATCCTGGCTAGCCAGGGCTCGACTGGGACCTCCCACGACACAGCAGGCACAGCCGTGTTGGACCTGGGCAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS CCA 72 bp ATGGTGACTGTGTGTCCGGGGACTCCTGGGGCCATCTaGCTGGCGACCGTCTGGATAACTCGGCTGGCTGCG +
Preference number: 6 (lower is better)
Translates to: MVTVCPGTPGAI*LATVWITRLAA
Trigger: CGCAGCCAGCCGAGTTATCCAGACGGTCGCCAGCCAGATGGCCCCAGGAGTCCCCGGACACACAGTCACCAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS GCA 72 bp CTGGAGCACTCCGTGAGGACAGAGGCCCGAAGGGGGTaGGGAAGCAGGAGACACCTCTCTGTCTCCGCTTTC +
Preference number: 6 (lower is better)
Translates to: LEHSVRTEARRG*GSRRHLSVSAF
Trigger: GAAAGCGGAGACAGAGAGGTGTCTCCTGCTTCCGCACCCCCTTCGGGCCTCTGTCCTCACGGAGTGCTCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS CCA 72 bp GCTCCGGAGATCCGGCTCCGGAATGTGGATCTTCAGTaGGGAGATCTGTGGGTAGAGTGGCCGCAGGGGCGA +
Preference number: 6 (lower is better)
Translates to: APEIRLRNVDLQ*GDLWVEWPQGR
Trigger: TCGCCCCTGCGGCCACTCTACCCACAGATCTCCCCACTGAAGATCCACATTCCGGAGCCGGATCTCCGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS CCA 72 bp TGCTGGACAGGAGTTGGGGACACTGATGGTGCCGGTTaGGGAAGGGATGGGGCTGACGAGGCTCCGGAGATC +
Preference number: 6 (lower is better)
Translates to: CWTGVGDTDGAG*GRDGADEAPEI
Trigger: GATCTCCGGAGCCTCGTCAGCCCCATCCCTTCCCCAACCGGCACCATCAGTGTCCCCAACTCCTGTCCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS CCA 72 bp TGCAGGCCACTGGAACGAGGGGACATCAGCCCTGGGTaGGTGGGTGAAGCTGGAGCACTCCGTGAGGACAGA +
Preference number: 6 (lower is better)
Translates to: CRPLERGDISPG*VGEAGALREDR
Trigger: TCTGTCCTCACGGAGTGCTCCAGCTTCACCCACCCACCCAGGGCTGATGTCCCCTCGTTCCAGTGGCCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS CCA 72 bp GTAACCACCCTCACCATGGTGACGGTAGGGGCCTGCTaGACCACATGGATGGCGTGGCCTGAGGGCTGCTGT +
Preference number: 6 (lower is better)
Translates to: VTTLTMVTVGAC*TTWMAWPEGCC
Trigger: ACAGCAGCCCTCAGGCCACGCCATCCATGTGGTCCAGCAGGCCCCTACCGTCACCATGGTGAGGGTGGTTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS CAA 72 bp GTGGCTGTCCCACCGGGTTCCTCTACCCGGGACCTCTaGACCTCGGGCTCTCCGCTAGAAGAGGCAGATGTG +
Preference number: 6 (lower is better)
Translates to: VAVPPGSSTRDL*TSGSPLEEADV
Trigger: CACATCTGCCTCTTCTAGCGGAGAGCCCGAGGTCAAGAGGTCCCGGGTAGAGGAACCCGGTGGGACAGCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS CAA 90 bp GTCCCAGTCGAGCCCTGGCTAGCCAGGATGTACCCGTTGGCTGAGTaGGCAGAGGTGGTAACCACCCTCACCATGGTGACGGTAGGGGCC +
Preference number: 6 (lower is better)
Translates to: VPVEPWLARMYPLAE*AEVVTTLTMVTVGA
Trigger: GGCCCCTACCGTCACCATGGTGAGGGTGGTTACCACCTCTGCCAACTCAGCCAACGGGTACATCCTGGCTAGCCAGGGCTCGACTGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS CAA 90 bp GGCTGTGTGGTGGCTGTCCCACCGGGTTCCTCTACCCGGGACCTCTaGACCTCGGGCTCTCCGCTAGAAGAGGCAGATGTGGTAGTGGAG +
Preference number: 6 (lower is better)
Translates to: GCVVAVPPGSSTRDL*TSGSPLEEADVVVE
Trigger: CTCCACTACCACATCTGCCTCTTCTAGCGGAGAGCCCGAGGTCAAGAGGTCCCGGGTAGAGGAACCCGGTGGGACAGCCACCACACAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS CAA 90 bp TCGTGGGAGGTCCCAGTCGAGCCCTGGCTAGCCAGGATGTACCCGTaGGCTGAGTTGGCAGAGGTGGTAACCACCCTCACCATGGTGACG +
Preference number: 6 (lower is better)
Translates to: SWEVPVEPWLARMYP*AELAEVVTTLTMVT
Trigger: CGTCACCATGGTGAGGGTGGTTACCACCTCTGCCAACTCAGCCAACGGGTACATCCTGGCTAGCCAGGGCTCGACTGGGACCTCCCACGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS CCA 72 bp GCTGCGCATAGGAGTACGGTGGCTTCGACTCGTCCTTaGGGCTGTCTCCGCCAGACGCATCTGCTTGCTGCT +
Preference number: 6 (lower is better)
Translates to: AAHRSTVASTRP*GCLRQTHLLAA
Trigger: AGCAGCAAGCAGATGCGTCTGGCGGAGACAGCCCCAAGGACGAGTCGAAGCCACCGTACTCCTATGCGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS CCA 72 bp GTGACGGTAGGGGCCTGCTGGACCACATGGATGGCGTaGCCTGAGGGCTGCTGTGAGGTCACTATGGAAGCT +
Preference number: 6 (lower is better)
Translates to: VTVGACWTTWMA*PEGCCEVTMEA
Trigger: AGCTTCCATAGTGACCTCACAGCAGCCCTCAGGCCACGCCATCCATGTGGTCCAGCAGGCCCCTACCGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS CAA 72 bp GTCCCAGTCGAGCCCTGGCTAGCCAGGATGTACCCGTaGGCTGAGTTGGCAGAGGTGGTAACCACCCTCACC +
Preference number: 6 (lower is better)
Translates to: VPVEPWLARMYP*AELAEVVTTLT
Trigger: GGTGAGGGTGGTTACCACCTCTGCCAACTCAGCCAACGGGTACATCCTGGCTAGCCAGGGCTCGACTGGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS CAA 72 bp GAGCCCTGGCTAGCCAGGATGTACCCGTTGGCTGAGTaGGCAGAGGTGGTAACCACCCTCACCATGGTGACG +
Preference number: 6 (lower is better)
Translates to: EPWLARMYPLAE*AEVVTTLTMVT
Trigger: CGTCACCATGGTGAGGGTGGTTACCACCTCTGCCAACTCAGCCAACGGGTACATCCTGGCTAGCCAGGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS TCA 72 bp AGTCGAGCCCTGGCTAGCCAGGATGTACCCGTTGGCTaGGTTGGCAGAGGTGGTAACCACCCTCACCATGGT +
Preference number: 6 (lower is better)
Translates to: SRALASQDVPVG*VGRGGNHPHHG
Trigger: ACCATGGTGAGGGTGGTTACCACCTCTGCCAACTCAGCCAACGGGTACATCCTGGCTAGCCAGGGCTCGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS TCA 72 bp GTCAAGCTATTCGTGGGTACAGCGTGCTTTCCATTCTaGGTGACAGCCCGGACCGGAAGGTGGTGCTGCCCG +
Preference number: 6 (lower is better)
Translates to: VKLFVGTACFPF*VTARTGRWCCP
Trigger: CGGGCAGCACCACCTTCCGGTCCGGGCTGTCACTCAGAATGGAAAGCACGCTGTACCCACGAATAGCTTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS GCA 72 bp CATCTGGCTGGCGACCGTCTGGATAACTCGGCTGGCTaGGGGGATTGTGGCAAATGCTATGGTGGGCTTCTC +
Preference number: 6 (lower is better)
Translates to: HLAGDRLDNSAG*GDCGKCYGGLL
Trigger: GAGAAGCCCACCATAGCATTTGCCACAATCCCCGCAGCCAGCCGAGTTATCCAGACGGTCGCCAGCCAGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS CAA 72 bp GCTATGGTGGGCTTCTCTTCCAAACCTCGAGCCTCATaGCCCAGGTCCAACACGGCTGTGCCTGCTGTGTCG +
Preference number: 6 (lower is better)
Translates to: AMVGFSSKPRAS*PRSNTAVPAVS
Trigger: CGACACAGCAGGCACAGCCGTGTTGGACCTGGGCAATGAGGCTCGAGGTTTGGAAGAGAAGCCCACCATAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS CAA 90 bp GTGGCAAATGCTATGGTGGGCTTCTCTTCCAAACCTCGAGCCTCATaGCCCAGGTCCAACACGGCTGTGCCTGCTGTGTCGTGGGAGGTC +
Preference number: 6 (lower is better)
Translates to: VANAMVGFSSKPRAS*PRSNTAVPAVSWEV
Trigger: GACCTCCCACGACACAGCAGGCACAGCCGTGTTGGACCTGGGCAATGAGGCTCGAGGTTTGGAAGAGAAGCCCACCATAGCATTTGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS GCA 72 bp GAAGCAGGAGACACCTCTCTGTCTCCGCTTTCGGAATaGTTGTTCCACGAGCTTGGCTTCGGAGGCAGGGTC +
Preference number: 6 (lower is better)
Translates to: EAGDTSLSPLSE*LFHELGFGGRV
Trigger: GACCCTGCCTCCGAAGCCAAGCTCGTGGAACAAGCATTCCGAAAGCGGAGACAGAGAGGTGTCTCCTGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS CCA 72 bp AGTGGCCGCAGGGGCGATGCTGGGGCCTCCTCTTTATaGTATAGCGATGTGAACTGGATCTTGATGGCCGTG +
Preference number: 6 (lower is better)
Translates to: SGRRGDAGASSL*YSDVNWILMAV
Trigger: CACGGCCATCAAGATCCAGTTCACATCGCTATACCATAAAGAGGAGGCCCCAGCATCGCCCCTGCGGCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS CCA 72 bp CTCGGCTGGCTGCGGGGATTGTGGCAAATGCTATGGTaGGCTTCTCTTCCAAACCTCGAGCCTCATTGCCCA +
Preference number: 6 (lower is better)
Translates to: LGWLRGLWQMLW*ASLPNLEPHCP
Trigger: TGGGCAATGAGGCTCGAGGTTTGGAAGAGAAGCCCACCATAGCATTTGCCACAATCCCCGCAGCCAGCCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS CAA 90 bp GGTGCGGAAGCAGGAGACACCTCTCTGTCTCCGCTTTCGGAATGCTaGTTCCACGAGCTTGGCTTCGGAGGCAGGGTCTATTCGCCAAAA +
Preference number: 6 (lower is better)
Translates to: GAEAGDTSLSPLSEC*FHELGFGGRVYSPK
Trigger: TTTTGGCGAATAGACCCTGCCTCCGAAGCCAAGCTCGTGGAACAAGCATTCCGAAAGCGGAGACAGAGAGGTGTCTCCTGCTTCCGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS CAA 72 bp GCAGGAGACACCTCTCTGTCTCCGCTTTCGGAATGCTaGTTCCACGAGCTTGGCTTCGGAGGCAGGGTCTAT +
Preference number: 6 (lower is better)
Translates to: AGDTSLSPLSEC*FHELGFGGRVY
Trigger: ATAGACCCTGCCTCCGAAGCCAAGCTCGTGGAACAAGCATTCCGAAAGCGGAGACAGAGAGGTGTCTCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS CAA 90 bp GAGACACCTCTCTGTCTCCGCTTTCGGAATGCTTGTTCCACGAGCTaGGCTTCGGAGGCAGGGTCTATTCGCCAAAAAGAGCCCTTCCCA +
Preference number: 6 (lower is better)
Translates to: ETPLCLRFRNACSTS*ASEAGSIRQKEPFP
Trigger: TGGGAAGGGCTCTTTTTGGCGAATAGACCCTGCCTCCGAAGCCAAGCTCGTGGAACAAGCATTCCGAAAGCGGAGACAGAGAGGTGTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS CCA 72 bp TCTGTCTCCGCTTTCGGAATGCTTGTTCCACGAGCTTaGCTTCGGAGGCAGGGTCTATTCGCCAAAAAGAGC +
Preference number: 6 (lower is better)
Translates to: SVSAFGMLVPRA*LRRQGLFAKKS
Trigger: GCTCTTTTTGGCGAATAGACCCTGCCTCCGAAGCCAAGCTCGTGGAACAAGCATTCCGAAAGCGGAGACAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS CAA 72 bp CTCTGTCTCCGCTTTCGGAATGCTTGTTCCACGAGCTaGGCTTCGGAGGCAGGGTCTATTCGCCAAAAAGAG +
Preference number: 6 (lower is better)
Translates to: LCLRFRNACSTS*ASEAGSIRQKE
Trigger: CTCTTTTTGGCGAATAGACCCTGCCTCCGAAGCCAAGCTCGTGGAACAAGCATTCCGAAAGCGGAGACAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7
CDS CAA 72 bp TCTGGGAATAGCGGTACTCTGGAACAGAGGCTAACTTaGACCCCAAGTCGGGATCATGTGGAATGGGGGAGC +
Preference number: 6 (lower is better)
Translates to: SGNSGTLEQRLT*TPSRDHVEWGS
Trigger: GCTCCCCCATTCCACATGATCCCGACTTGGGGTCAAAGTTAGCCTCTGTTCCAGAGTACCGCTATTCCCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000072837.7