Pregenerated sensors for FOXJ3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032998Ensembl transcript IDs: ENSMUST00000044564.15, ENSMUST00000106310.9, ENSMUST00000137560.8, ENSMUST00000138845.9, ENSMUST00000160219.2, ENSMUST00000162267.8, ENSMUST00000176012.8
Found 313 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGGGGTCCAAGCAACAGCGAAGCCCGAGGCTCTCCCTTCTTCCCTaGACTCCCCATGGCTTCCCAGGGATTCATTCAAGACAACACTCC | + |
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Preference number: 1 (lower is better) Translates to: WGSKQQRSPRLSLLP*TPHGFPGIHSRQHS Trigger: GGAGTGTTGTCTTGAATGAATCCCTGGGAAGCCATGGGGAGTGCAGGGAAGAAGGGAGAGCCTCGGGCTTCGCTGTTGCTTGGACCCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
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| 3UTR GCA 90 bp | GCTGTGTGTCATCAAATAAATCAGAAATGGCCACTAGAGGGACTCTaGGCCCACCAGGTAGCCTTCCCTGCCCAGGCACTCAGGCTTGCT | + |
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Preference number: 1 (lower is better) Translates to: AVCHQINQKWPLEGL*AHQVAFPAQALRLA Trigger: AGCAAGCCTGAGTGCCTGGGCAGGGAAGGCTACCTGGTGGGCGCAGAGTCCCTCTAGTGGCCATTTCTGATTTATTTGATGACACACAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
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| 3UTR GCA 90 bp | TGGCTATTGGTTGAGAATCCTCTGTACCTGAGCTTCTTTCTCTCATaGCAAGTGGGGGTCCAAGCAACAGCGAAGCCCGAGGCTCTCCCT | + |
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Preference number: 1 (lower is better) Translates to: WLLVENPLYLSFFLS*QVGVQATAKPEALP Trigger: AGGGAGAGCCTCGGGCTTCGCTGTTGCTTGGACCCCCACTTGGCATGAGAGAAAGAAGCTCAGGTACAGAGGATTCTCAACCAATAGCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
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| 3UTR CCA 90 bp | TCACGCAGTCAGTCACTGCACTCAAGACTGAAGCAGATAAGACTCTaGAGCTGCATGCAGCCCCTGCTAGCGTTACCAACAGCAGGGACA | + |
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Preference number: 1 (lower is better) Translates to: SRSQSLHSRLKQIRL*SCMQPLLALPTAGT Trigger: TGTCCCTGCTGTTGGTAACGCTAGCAGGGGCTGCATGCAGCTCCAGAGTCTTATCTGCTTCAGTCTTGAGTGCAGTGACTGACTGCGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
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| 3UTR TCA 90 bp | TTCCGAGTGAGGCCTGTTGGCTATTGGTTGAGAATCCTCTGTACCTaGGCTTCTTTCTCTCATGCCAAGTGGGGGTCCAAGCAACAGCGA | + |
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Preference number: 1 (lower is better) Translates to: FRVRPVGYWLRILCT*ASFSHAKWGSKQQR Trigger: TCGCTGTTGCTTGGACCCCCACTTGGCATGAGAGAAAGAAGCTCAGGTACAGAGGATTCTCAACCAATAGCCAACAGGCCTCACTCGGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
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| 3UTR CCA 90 bp | TTCAGCCCTAGAGAACTTGCTGTGTGTCATCAAATAAATCAGAAATaGCCACTAGAGGGACTCTGCGCCCACCAGGTAGCCTTCCCTGCC | + |
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Preference number: 1 (lower is better) Translates to: FSPRELAVCHQINQK*PLEGLCAHQVAFPA Trigger: GGCAGGGAAGGCTACCTGGTGGGCGCAGAGTCCCTCTAGTGGCCATTTCTGATTTATTTGATGACACACAGCAAGTTCTCTAGGGCTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
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| 3UTR CCA 90 bp | CAGACAGCCATCTCATCTTGCCCAGTCCTTCCGAGTGAGGCCTGTTaGCTATTGGTTGAGAATCCTCTGTACCTGAGCTTCTTTCTCTCA | + |
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Preference number: 1 (lower is better) Translates to: QTAISSCPVLPSEAC*LLVENPLYLSFFLS Trigger: TGAGAGAAAGAAGCTCAGGTACAGAGGATTCTCAACCAATAGCCAACAGGCCTCACTCGGAAGGACTGGGCAAGATGAGATGGCTGTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
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| 3UTR GCA 90 bp | GATATTCTCATTCTCTCCCCGTGCCCCGTCTCTTTCATGATCTCTTaGACTTACACACACACACACACACACACACACACACACACACAC | + |
|
Preference number: 1 (lower is better) Translates to: DILILSPCPVSFMIS*TYTHTHTHTHTHTH Trigger: GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAGTGCAAGAGATCATGAAAGAGACGGGGCACGGGGAGAGAATGAGAATATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
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| 3UTR GCA 90 bp | ACCTCATTTTCCCAAGCTTTTTCTCTGCAGACAGCCATCTCATCTTaGCCAGTCCTTCCGAGTGAGGCCTGTTGGCTATTGGTTGAGAAT | + |
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Preference number: 1 (lower is better) Translates to: TSFSQAFSLQTAISS*PVLPSEACWLLVEN Trigger: ATTCTCAACCAATAGCCAACAGGCCTCACTCGGAAGGACTGGGCAAGATGAGATGGCTGTCTGCAGAGAAAAAGCTTGGGAAAATGAGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
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| 3UTR CCA 90 bp | AGTGCACACTGCTGCGGAGCAATCCTAGTCACAGAGCAGCCATTTTaGTGTCTAGAAAACAGAGACTTGAGCAAACTACTGAGGACCTCA | + |
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Preference number: 1 (lower is better) Translates to: SAHCCGAILVTEQPF*CLENRDLSKLLRTS Trigger: TGAGGTCCTCAGTAGTTTGCTCAAGTCTCTGTTTTCTAGACACCAAAATGGCTGCTCTGTGACTAGGATTGCTCCGCAGCAGTGTGCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
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| 3UTR CCA 90 bp | CTTGCTGAGCCCCAGGGAAACAGGGAATCACAGAAGAGTGGTGAGTaGCCTCAAGTGCCATTCTTGGTCAGTTTAAACATTCATAAATAT | + |
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Preference number: 1 (lower is better) Translates to: LAEPQGNRESQKSGE*PQVPFLVSLNIHKY Trigger: ATATTTATGAATGTTTAAACTGACCAAGAATGGCACTTGAGGCCACTCACCACTCTTCTGTGATTCCCTGTTTCCCTGGGGCTCAGCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
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| 3UTR CCA 90 bp | TTTACATTTCAAACACTGCCACAAATGCCAGTCGGACTCTTCTCCTaGACAGAGCGCCCCATCTGTGTATGTATGTTTGTTAGTCCTTAC | + |
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Preference number: 1 (lower is better) Translates to: FTFQTLPQMPVGLFS*TERPICVCMFVSPY Trigger: GTAAGGACTAACAAACATACATACACAGATGGGGCGCTCTGTCCAGGAGAAGAGTCCGACTGGCATTTGTGGCAGTGTTTGAAATGTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
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| 3UTR GCA 90 bp | TGTCTACTTCCTCTAAAAGTAAAACTAAGCATGGCAGCACATGCTTaGAATTTCAGCACTAGGGAGGTAGAGGCCTGCTGTAAGTTCAAG | + |
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Preference number: 1 (lower is better) Translates to: CLLPLKVKLSMAAHA*NFSTREVEACCKFK Trigger: CTTGAACTTACAGCAGGCCTCTACCTCCCTAGTGCTGAAATTGCAAGCATGTGCTGCCATGCTTAGTTTTACTTTTAGAGGAAGTAGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000138845.9 ENSMUST00000162267.8 |
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| 3UTR CCA 90 bp | CAGAGGGTACTGGCAGGGAGACAAACATGTAGTTCTTGCTTGGGTTaGATAAAAGCAGTAAGTTACCCAGCTAGAATCTCTGATTGTCTT | + |
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Preference number: 1 (lower is better) Translates to: QRVLAGRQTCSSCLG*IKAVSYPARISDCL Trigger: AAGACAATCAGAGATTCTAGCTGGGTAACTTACTGCTTTTATCCAACCCAAGCAAGAACTACATGTTTGTCTCCCTGCCAGTACCCTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
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| 3UTR GCA 90 bp | TACCAACAGCAGGGACACTGCTGTATAAACCCAGCCTCTGTATCTTaGTGCCTAAATAGACTGATTCAAATTCCAGGAAATTCCTATGTA | + |
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Preference number: 1 (lower is better) Translates to: YQQQGHCCINPASVS*CLNRLIQIPGNSYV Trigger: TACATAGGAATTTCCTGGAATTTGAATCAGTCTATTTAGGCAGCAAGATACAGAGGCTGGGTTTATACAGCAGTGTCCCTGCTGTTGGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
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| 3UTR GCA 90 bp | AAAATCAGTCTGGCACTTGTGGTCAACATCAAACTGACACAAATATaGAAAAAGCTGTCCAAATCACAACAGTTAGGAGCTACAGAGGGT | + |
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Preference number: 1 (lower is better) Translates to: KISLALVVNIKLTQI*KKLSKSQQLGATEG Trigger: ACCCTCTGTAGCTCCTAACTGTTGTGATTTGGACAGCTTTTTGCATATTTGTGTCAGTTTGATGTTGACCACAAGTGCCAGACTGATTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
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| 3UTR CCA 90 bp | CTTTACAGCACTATACGGTTACAAAGAATGGGTGCCACTCACCATTaGCAGAATATGAAATCGTGCAATAGGAAAACTGTAGAAACATTA | + |
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Preference number: 1 (lower is better) Translates to: LYSTIRLQRMGATHH*QNMKSCNRKTVETL Trigger: TAATGTTTCTACAGTTTTCCTATTGCACGATTTCATATTCTGCCAATGGTGAGTGGCACCCATTCTTTGTAACCGTATAGTGCTGTAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
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| 3UTR-3UTR TCA 90 bp | AAACACTGCCACAAATGCCAGTCGGACTCTTCTCCTGGACAGAGCGCCCCATCTCCCAGTCCTTCCGAGTaGGGCCTGTTGGCTATTGGT | + |
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Preference number: 2 (lower is better) Translates to: KHCHKCQSDSSPGQSAPSPSPSE*GLLAIG Trigger: ACCAATAGCCAACAGGCCTCACTCGGAAGGACTGGG...AGATGGGGCGCTCTGTCCAGGAGAAGAGTCCGACTGGCATTTGTGGCAGTGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
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| 3UTR-3UTR CCA 90 bp | AAACACTGCCACAAATGCCAGTCGGACTCTTCTCCTGGACAGAGCGCCCCATCTTCCCTGCACTCCCCATaGCTTCCCAGGGATTCATTC | + |
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Preference number: 2 (lower is better) Translates to: KHCHKCQSDSSPGQSAPSSLHSP*LPRDSF Trigger: GAATGAATCCCTGGGAAGCCATGGGGAGTGCAGGGA...AGATGGGGCGCTCTGTCCAGGAGAAGAGTCCGACTGGCATTTGTGGCAGTGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
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| 3UTR-3UTR CCA 90 bp | AAACACTGCCACAAATGCCAGTCGGACTCTTCTCCTGGACAGAGCGCCCCATCTCCGAGTGAGGCCTGTTaGCTATTGGTTGAGAATCCT | + |
|
Preference number: 2 (lower is better) Translates to: KHCHKCQSDSSPGQSAPSPSEAC*LLVENP Trigger: AGGATTCTCAACCAATAGCCAACAGGCCTCACTCGG...AGATGGGGCGCTCTGTCCAGGAGAAGAGTCCGACTGGCATTTGTGGCAGTGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
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| 3UTR-3UTR CCA 90 bp | AAACACTGCCACAAATGCCAGTCGGACTCTTCTCCTGGACAGAGCGCCCCATCTCAGAAGAGTGGTGAGTaGCCTCAAGTGCCATTCTTG | + |
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Preference number: 2 (lower is better) Translates to: KHCHKCQSDSSPGQSAPSQKSGE*PQVPFL Trigger: CAAGAATGGCACTTGAGGCCACTCACCACTCTTCTG...AGATGGGGCGCTCTGTCCAGGAGAAGAGTCCGACTGGCATTTGTGGCAGTGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
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| 3UTR-3UTR CCA 90 bp | GCACTCAGGCTTGCTGAGCCCCAGGGAAACAGGGAATCACAGAAGAGTGGTGAGACGATCTATTCACTGTaGGGAGGAGAATCTCCTTTC | + |
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Preference number: 2 (lower is better) Translates to: ALRLAEPQGNRESQKSGETIYSL*GGESPF Trigger: GAAAGGAGATTCTCCTCCCCACAGTGAATAGATCGT...CTCACCACTCTTCTGTGATTCCCTGTTTCCCTGGGGCTCAGCAAGCCTGAGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
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| 3UTR CAA 90 bp | GCCATCTCATCTTGCCCAGTCCTTCCGAGTGAGGCCTGTTGGCTATaGGTTGAGAATCCTCTGTACCTGAGCTTCTTTCTCTCATGCCAA | + |
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Preference number: 2 (lower is better) Translates to: AISSCPVLPSEACWL*VENPLYLSFFLSCQ Trigger: TTGGCATGAGAGAAAGAAGCTCAGGTACAGAGGATTCTCAACCAATAGCCAACAGGCCTCACTCGGAAGGACTGGGCAAGATGAGATGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
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| 3UTR-3UTR TCA 90 bp | AAACACTGCCACAAATGCCAGTCGGACTCTTCTCCTGGACAGAGCGCCCCATCTCCTCTGCACTGTTTTTaGGTACCAACTCCAGATTCT | + |
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Preference number: 2 (lower is better) Translates to: KHCHKCQSDSSPGQSAPSPLHCF*VPTPDS Trigger: AGAATCTGGAGTTGGTACTCAAAAACAGTGCAGAGG...AGATGGGGCGCTCTGTCCAGGAGAAGAGTCCGACTGGCATTTGTGGCAGTGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
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| 3UTR-3UTR GCA 90 bp | CACTCAGGCTTGCTGAGCCCCAGGGAAACAGGGAATCACAGAAGAGTGGTGAGTAAGAATCCTGGAGTCTaGTGTCTTGCAGAAACAAGC | + |
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Preference number: 2 (lower is better) Translates to: HSGLLSPRETGNHRRVVSKNPGV*CLAETS Trigger: GCTTGTTTCTGCAAGACAGCAGACTCCAGGATTCTT...ACTCACCACTCTTCTGTGATTCCCTGTTTCCCTGGGGCTCAGCAAGCCTGAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
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| 3UTR-3UTR GCA 90 bp | GCCCAGGCACTCAGGCTTGCTGAGCCCCAGGGAAACAGGGAATCACAGAAGAGTAAATTCATCAAGCCATaGTGTTTCAGACTGCGATAC | + |
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Preference number: 2 (lower is better) Translates to: AQALRLAEPQGNRESQKSKFIKP*CFRLRY Trigger: GTATCGCAGTCTGAAACAGCATGGCTTGATGAATTT...ACTCTTCTGTGATTCCCTGTTTCCCTGGGGCTCAGCAAGCCTGAGTGCCTGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
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| 3UTR-3UTR GCA 90 bp | CACATGTGTAAGTGCTCATGGAGGCCAGAAGAGGGCACTGGACCTCCTAAGAGTATGGCAGCACATGCTTaGAATTTCAGCACTAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: HMCKCSWRPEEGTGPPKSMAAHA*NFSTRE Trigger: CTCCCTAGTGCTGAAATTGCAAGCATGTGCTGCCAT...ACTCTTAGGAGGTCCAGTGCCCTCTTCTGGCCTCCATGAGCACTTACACATGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138845.9 ENSMUST00000162267.8 |
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| 3UTR-3UTR TCA 90 bp | CACTCAGGCTTGCTGAGCCCCAGGGAAACAGGGAATCACAGAAGAGTGGTGAGTAATCCGTCCTTTCACTaGACAAAAAGAATCCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: HSGLLSPRETGNHRRVVSNPSFH*TKRILE Trigger: CTCCAGGATTCTTTTTGTTCAGTGAAAGGACGGATT...ACTCACCACTCTTCTGTGATTCCCTGTTTCCCTGGGGCTCAGCAAGCCTGAGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
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| 3UTR-3UTR TCA 90 bp | GCACTCAGGCTTGCTGAGCCCCAGGGAAACAGGGAATCACAGAAGAGTGGTGAGAAGGACCAATGCTTCTaGTTGTCTTTGTCTGTAAAC | + |
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Preference number: 2 (lower is better) Translates to: ALRLAEPQGNRESQKSGEKDQCF*LSLSVN Trigger: GTTTACAGACAAAGACAATCAGAAGCATTGGTCCTT...CTCACCACTCTTCTGTGATTCCCTGTTTCCCTGGGGCTCAGCAAGCCTGAGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
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| 3UTR-3UTR TCA 90 bp | CAGGGAAACAGGGAATCACAGAAGAGTGGTGAGTGGCCTCAAGTGCCATTCTTGAGAATCCTCTGTACCTaGGCTTCTTTCTCTCATGCC | + |
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Preference number: 2 (lower is better) Translates to: QGNRESQKSGEWPQVPFLRILCT*ASFSHA Trigger: GGCATGAGAGAAAGAAGCTCAGGTACAGAGGATTCT...CAAGAATGGCACTTGAGGCCACTCACCACTCTTCTGTGATTCCCTGTTTCCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
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| 3UTR-3UTR GCA 90 bp | GCACTCAGGCTTGCTGAGCCCCAGGGAAACAGGGAATCACAGAAGAGTGGTGAGTCTTTCATGATCTCTTaGACTTACACACACACACAC | + |
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Preference number: 2 (lower is better) Translates to: ALRLAEPQGNRESQKSGESFMIS*TYTHTH Trigger: GTGTGTGTGTGTGTAAGTGCAAGAGATCATGAAAGA...CTCACCACTCTTCTGTGATTCCCTGTTTCCCTGGGGCTCAGCAAGCCTGAGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
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| 3UTR-3UTR GCA 90 bp | ATTTACATTTCAAACACTGCCACAAATGCCAGTCGGACTCTTCTCCTGGACAGACTCTCCCTTCTTCCCTaGACTCCCCATGGCTTCCCA | + |
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Preference number: 2 (lower is better) Translates to: IYISNTATNASRTLLLDRLSLLP*TPHGFP Trigger: TGGGAAGCCATGGGGAGTGCAGGGAAGAAGGGAGAG...TCTGTCCAGGAGAAGAGTCCGACTGGCATTTGTGGCAGTGTTTGAAATGTAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
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| 3UTR-3UTR GCA 90 bp | GCACTCAGGCTTGCTGAGCCCCAGGGAAACAGGGAATCACAGAAGAGTGGTGAGAAATTCATCAAGCCATaGTGTTTCAGACTGCGATAC | + |
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Preference number: 2 (lower is better) Translates to: ALRLAEPQGNRESQKSGEKFIKP*CFRLRY Trigger: GTATCGCAGTCTGAAACAGCATGGCTTGATGAATTT...CTCACCACTCTTCTGTGATTCCCTGTTTCCCTGGGGCTCAGCAAGCCTGAGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
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| 3UTR-3UTR CCA 90 bp | ATCAAAGCTCTGAGGTGCTTCATGTTGGGGACACACAGACCCAACAGCAGGTCAAGCTACAGAGGGTACTaGCAGGGAGACAAACATGTA | + |
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Preference number: 2 (lower is better) Translates to: IKALRCFMLGTHRPNSRSSYRGY*QGDKHV Trigger: TACATGTTTGTCTCCCTGCCAGTACCCTCTGTAGCT...TGACCTGCTGTTGGGTCTGTGTGTCCCCAACATGAAGCACCTCAGAGCTTTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
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| 3UTR CAA 90 bp | AAGTGCACACTGCTGCGGAGCAATCCTAGTCACAGAGCAGCCATTTaGGTGTCTAGAAAACAGAGACTTGAGCAAACTACTGAGGACCTC | + |
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Preference number: 2 (lower is better) Translates to: KCTLLRSNPSHRAAI*VSRKQRLEQTTEDL Trigger: GAGGTCCTCAGTAGTTTGCTCAAGTCTCTGTTTTCTAGACACCAAAATGGCTGCTCTGTGACTAGGATTGCTCCGCAGCAGTGTGCACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
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| 3UTR CAA 90 bp | TCGGACTCTTCTCCTGGACAGAGCGCCCCATCTGTGTATGTATGTTaGTTAGTCCTTACCCCAAGTCTCCAGTTAATTTCAGCCCTAGAG | + |
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Preference number: 2 (lower is better) Translates to: SDSSPGQSAPSVYVC*LVLTPSLQLISALE Trigger: CTCTAGGGCTGAAATTAACTGGAGACTTGGGGTAAGGACTAACAAACATACATACACAGATGGGGCGCTCTGTCCAGGAGAAGAGTCCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
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| 3UTR CAA 90 bp | AGATATTCTCATTCTCTCCCCGTGCCCCGTCTCTTTCATGATCTCTaGCACTTACACACACACACACACACACACACACACACACACACA | + |
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Preference number: 2 (lower is better) Translates to: RYSHSLPVPRLFHDL*HLHTHTHTHTHTHT Trigger: TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAGTGCAAGAGATCATGAAAGAGACGGGGCACGGGGAGAGAATGAGAATATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
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| 3UTR-3UTR TCA 90 bp | TGTTGGGGACACACAGACCCAACAGCAGGTCACGCAGTCAGTCACTGCACTCAATGGTCAACATCAAACTaGCACAAATATGCAAAAAGC | + |
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Preference number: 2 (lower is better) Translates to: CWGHTDPTAGHAVSHCTQWSTSN*HKYAKS Trigger: GCTTTTTGCATATTTGTGTCAGTTTGATGTTGACCA...TTGAGTGCAGTGACTGACTGCGTGACCTGCTGTTGGGTCTGTGTGTCCCCAACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
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| 3UTR-3UTR TCA 90 bp | TGTGTGTCATCAAATAAATCAGAAATGGCCACTAGAGGGACTCTGCGCCCACCAACACCGAATGACAAGTaGCAAGCTTGCTCAGGAACA | + |
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Preference number: 2 (lower is better) Translates to: CVSSNKSEMATRGTLRPPTPNDK*QACSGT Trigger: TGTTCCTGAGCAAGCTTGTCACTTGTCATTCGGTGT...TGGTGGGCGCAGAGTCCCTCTAGTGGCCATTTCTGATTTATTTGATGACACACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
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| 3UTR-3UTR GCA 90 bp | AAGCTTGCTCAGGAACAACGGCCCTCTGCACTGTTTTTGAGTACCAACTCCAGAAAGAATCCTGGAGTCTaGTGTCTTGCAGAAACAAGC | + |
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Preference number: 2 (lower is better) Translates to: KLAQEQRPSALFLSTNSRKNPGV*CLAETS Trigger: GCTTGTTTCTGCAAGACAGCAGACTCCAGGATTCTT...TCTGGAGTTGGTACTCAAAAACAGTGCAGAGGGCCGTTGTTCCTGAGCAAGCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
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| 3UTR-3UTR CCA 90 bp | TGTTGGGGACACACAGACCCAACAGCAGGTCACGCAGTCAGTCACTGCACTCAAAGTTCTTGCTTGGGTTaGATAAAAGCAGTAAGTTAC | + |
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Preference number: 2 (lower is better) Translates to: CWGHTDPTAGHAVSHCTQSSCLG*IKAVSY Trigger: GTAACTTACTGCTTTTATCCAACCCAAGCAAGAACT...TTGAGTGCAGTGACTGACTGCGTGACCTGCTGTTGGGTCTGTGTGTCCCCAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
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| 3UTR-3UTR TCA 90 bp | CAGGGAAACAGGGAATCACAGAAGAGTGGTGAGTGGCCTCAAGTGCCATTCTTGTACTCGGTGGATTCATaGTTACTCCTATTTCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: QGNRESQKSGEWPQVPFLYSVDS*LLLFLK Trigger: CTTCAGAAATAGGAGTAATCATGAATCCACCGAGTA...CAAGAATGGCACTTGAGGCCACTCACCACTCTTCTGTGATTCCCTGTTTCCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
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| 3UTR-3UTR GCA 90 bp | TGTGACATGACACAAAACAAAGCAACTGATCAAAGCTCTGAGGTGCTTCATGTTATAAGACTCTGGAGCTaGATGCAGCCCCTGCTAGCG | + |
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Preference number: 2 (lower is better) Translates to: CDMTQNKATDQSSEVLHVIRLWS*MQPLLA Trigger: CGCTAGCAGGGGCTGCATGCAGCTCCAGAGTCTTAT...AACATGAAGCACCTCAGAGCTTTGATCAGTTGCTTTGTTTTGTGTCATGTCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
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| 3UTR-3UTR GCA 90 bp | TACTCTATTCCATTTGAAATTATCCCAAGATCGATCCCCTCCCACTTCAAAGGAATAAGACTCTGGAGCTaGATGCAGCCCCTGCTAGCG | + |
|
Preference number: 2 (lower is better) Translates to: YSIPFEIIPRSIPSHFKGIRLWS*MQPLLA Trigger: CGCTAGCAGGGGCTGCATGCAGCTCCAGAGTCTTAT...TCCTTTGAAGTGGGAGGGGATCGATCTTGGGATAATTTCAAATGGAATAGAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR-3UTR CCA 90 bp | CAGTCGGACTCTTCTCCTGGACAGAGCGCCCCATCTGTGTATGTATGTTTGTTACAAATAAATCAGAAATaGCCACTAGAGGGACTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: QSDSSPGQSAPSVYVCLLQINQK*PLEGLC Trigger: GCAGAGTCCCTCTAGTGGCCATTTCTGATTTATTTG...TAACAAACATACATACACAGATGGGGCGCTCTGTCCAGGAGAAGAGTCCGACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR CAA 90 bp | GAGCTACAGAGGGTACTGGCAGGGAGACAAACATGTAGTTCTTGCTaGGGTTGGATAAAAGCAGTAAGTTACCCAGCTAGAATCTCTGAT | + |
|
Preference number: 2 (lower is better) Translates to: ELQRVLAGRQTCSSC*GWIKAVSYPARISD Trigger: ATCAGAGATTCTAGCTGGGTAACTTACTGCTTTTATCCAACCCAAGCAAGAACTACATGTTTGTCTCCCTGCCAGTACCCTCTGTAGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR-3UTR GCA 90 bp | AAGCTTGCTCAGGAACAACGGCCCTCTGCACTGTTTTTGAGTACCAACTCCAGACATTTGAAAGCATCCTaGAGAAAATGGCCTAACAAG | + |
|
Preference number: 2 (lower is better) Translates to: KLAQEQRPSALFLSTNSRHLKAS*RKWPNK Trigger: CTTGTTAGGCCATTTTCTGCAGGATGCTTTCAAATG...TCTGGAGTTGGTACTCAAAAACAGTGCAGAGGGCCGTTGTTCCTGAGCAAGCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR-3UTR GCA 90 bp | TCTGGCAGCGACAATCCTAATGACACTTGGAATATTTCTTTACAGCACTATACGCTCATTCTCTCCCCGTaGCCCGTCTCTTTCATGATC | + |
|
Preference number: 2 (lower is better) Translates to: SGSDNPNDTWNISLQHYTLILSP*PVSFMI Trigger: GATCATGAAAGAGACGGGGCACGGGGAGAGAATGAG...CGTATAGTGCTGTAAAGAAATATTCCAAGTGTCATTAGGATTGTCGCTGCCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR-3UTR CCA 90 bp | TACTCTATTCCATTTGAAATTATCCCAAGATCGATCCCCTCCCACTTCAAAGGAAAGCAGATAAGACTCTaGAGCTGCATGCAGCCCCTG | + |
|
Preference number: 2 (lower is better) Translates to: YSIPFEIIPRSIPSHFKGKQIRL*SCMQPL Trigger: CAGGGGCTGCATGCAGCTCCAGAGTCTTATCTGCTT...TCCTTTGAAGTGGGAGGGGATCGATCTTGGGATAATTTCAAATGGAATAGAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR-3UTR TCA 90 bp | TGGTGTCTAGAAAACAGAGACTTGAGCAAACTACTGAGGACCTCATTTTCCCAAACACCGAATGACAAGTaGCAAGCTTGCTCAGGAACA | + |
|
Preference number: 2 (lower is better) Translates to: WCLENRDLSKLLRTSFSQTPNDK*QACSGT Trigger: TGTTCCTGAGCAAGCTTGTCACTTGTCATTCGGTGT...TTGGGAAAATGAGGTCCTCAGTAGTTTGCTCAAGTCTCTGTTTTCTAGACACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR-3UTR TCA 90 bp | GCTTCCCAGGGATTCATTCAAGACAACACTCCATTAACACATACACAGATATTCGCCCCGTCTCTTTCATaGTCTCTTGCACTTACACAC | + |
|
Preference number: 2 (lower is better) Translates to: ASQGFIQDNTPLTHTQIFAPSLS*SLALTH Trigger: GTGTGTAAGTGCAAGAGATCATGAAAGAGACGGGGC...GAATATCTGTGTATGTGTTAATGGAGTGTTGTCTTGAATGAATCCCTGGGAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR-3UTR GCA 90 bp | CAGTCGGACTCTTCTCCTGGACAGAGCGCCCCATCTGTGTATGTATGTTTGTTACAAACATGTAGTTCTTaGTTGGGTTGGATAAAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: QSDSSPGQSAPSVYVCLLQTCSS*LGWIKA Trigger: TGCTTTTATCCAACCCAAGCAAGAACTACATGTTTG...TAACAAACATACATACACAGATGGGGCGCTCTGTCCAGGAGAAGAGTCCGACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR-3UTR GCA 90 bp | TCTGGCAGCGACAATCCTAATGACACTTGGAATATTTCTTTACAGCACTATACGAGCTTCTTTCTCTCATaGCAAGTGGGGGTCCAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: SGSDNPNDTWNISLQHYTSFFLS*QVGVQA Trigger: TGCTTGGACCCCCACTTGGCATGAGAGAAAGAAGCT...CGTATAGTGCTGTAAAGAAATATTCCAAGTGTCATTAGGATTGTCGCTGCCAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR-3UTR TCA 90 bp | TATCCCAAGATCGATCCCCTCCCACTTCAAAGGACGTCTGAGACACATATTAAAAATCCGTCCTTTCACTaGACAAAAAGAATCCTGGAG | + |
|
Preference number: 2 (lower is better) Translates to: YPKIDPLPLQRTSETHIKNPSFH*TKRILE Trigger: CTCCAGGATTCTTTTTGTTCAGTGAAAGGACGGATT...TTTAATATGTGTCTCAGACGTCCTTTGAAGTGGGAGGGGATCGATCTTGGGATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR-3UTR TCA 90 bp | TATGGAGACATTGGTTTGTTTGAAGAGCCAAGCAATACCCAGTTTCAGTCAGCCTGGGCTTTGAAAAACTaGTTTCCTTTCAGCTCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: YGDIGLFEEPSNTQFQSAWALKN*FPFSSL Trigger: CAGAGAGCTGAAAGGAAATCAGTTTTTCAAAGCCCA...GGCTGACTGAAACTGGGTATTGCTTGGCTCTTCAAACAAACCAATGTCTCCATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR-3UTR GCA 90 bp | TGTGTGTCATCAAATAAATCAGAAATGGCCACTAGAGGGACTCTGCGCCCACCACAAACATGTAGTTCTTaGTTGGGTTGGATAAAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: CVSSNKSEMATRGTLRPPQTCSS*LGWIKA Trigger: TGCTTTTATCCAACCCAAGCAAGAACTACATGTTTG...TGGTGGGCGCAGAGTCCCTCTAGTGGCCATTTCTGATTTATTTGATGACACACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR-3UTR GCA 90 bp | AGATCGATCCCCTCCCACTTCAAAGGACGTCTGAGACACATATTAAATATTTACCCCAAGCTTTTTCTCTaGAGACAGCCATCTCATCTT | + |
|
Preference number: 2 (lower is better) Translates to: RSIPSHFKGRLRHILNIYPKLFL*RQPSHL Trigger: AAGATGAGATGGCTGTCTGCAGAGAAAAAGCTTGGG...GTAAATATTTAATATGTGTCTCAGACGTCCTTTGAAGTGGGAGGGGATCGATCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR-3UTR CCA 90 bp | AACCAATTAACGATCTATTCACTGTGGGGAGGAGAATCTCCTTTCTTTACTTTCAGCTACAGAGGGTACTaGCAGGGAGACAAACATGTA | + |
|
Preference number: 2 (lower is better) Translates to: NQLTIYSLWGGESPFFTFSYRGY*QGDKHV Trigger: TACATGTTTGTCTCCCTGCCAGTACCCTCTGTAGCT...GAAAGTAAAGAAAGGAGATTCTCCTCCCCACAGTGAATAGATCGTTAATTGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR-3UTR CCA 90 bp | TATGGAGACATTGGTTTGTTTGAAGAGCCAAGCAATACCCAGTTTCAGTCAGCCTCTGAAAAATCAGTCTaGCACTTGTGGTCAACATCA | + |
|
Preference number: 2 (lower is better) Translates to: YGDIGLFEEPSNTQFQSASEKSV*HLWSTS Trigger: TGATGTTGACCACAAGTGCCAGACTGATTTTTCAGA...GGCTGACTGAAACTGGGTATTGCTTGGCTCTTCAAACAAACCAATGTCTCCATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR-3UTR TCA 90 bp | TCTGGCAGCGACAATCCTAATGACACTTGGAATATTTCTTTACAGCACTATACGTGGGCTTTGAAAAACTaGTTTCCTTTCAGCTCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: SGSDNPNDTWNISLQHYTWALKN*FPFSSL Trigger: CAGAGAGCTGAAAGGAAATCAGTTTTTCAAAGCCCA...CGTATAGTGCTGTAAAGAAATATTCCAAGTGTCATTAGGATTGTCGCTGCCAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR-3UTR GCA 90 bp | ATTTACATTTCAAACACTGCCACAAATGCCAGTCGGACTCTTCTCCTGGACAGATATGTATCTATAAACTaGTCGCAGCAAAATAGGCTC | + |
|
Preference number: 2 (lower is better) Translates to: IYISNTATNASRTLLLDRYVSIN*SQQNRL Trigger: GAGCCTATTTTGCTGCGAGCAGTTTATAGATACATA...TCTGTCCAGGAGAAGAGTCCGACTGGCATTTGTGGCAGTGTTTGAAATGTAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR-3UTR CCA 90 bp | GCTTCCCAGGGATTCATTCAAGACAACACTCCATTAACACATACACAGATATTCGAACAAAAAGAATCCTaGAGTCTGCTGTCTTGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: ASQGFIQDNTPLTHTQIFEQKES*SLLSCR Trigger: TCTGCAAGACAGCAGACTCCAGGATTCTTTTTGTTC...GAATATCTGTGTATGTGTTAATGGAGTGTTGTCTTGAATGAATCCCTGGGAAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR-3UTR CCA 90 bp | AGATCGATCCCCTCCCACTTCAAAGGACGTCTGAGACACATATTAAATATTTACCAAATAAATCAGAAATaGCCACTAGAGGGACTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: RSIPSHFKGRLRHILNIYQINQK*PLEGLC Trigger: GCAGAGTCCCTCTAGTGGCCATTTCTGATTTATTTG...GTAAATATTTAATATGTGTCTCAGACGTCCTTTGAAGTGGGAGGGGATCGATCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR CAA 90 bp | AACAGGGAATCACAGAAGAGTGGTGAGTGGCCTCAAGTGCCATTCTaGGTCAGTTTAAACATTCATAAATATATCGATCACTGCAAATCA | + |
|
Preference number: 2 (lower is better) Translates to: NRESQKSGEWPQVPF*VSLNIHKYIDHCKS Trigger: TGATTTGCAGTGATCGATATATTTATGAATGTTTAAACTGACCAAGAATGGCACTTGAGGCCACTCACCACTCTTCTGTGATTCCCTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR-3UTR TCA 90 bp | TGTGACATGACACAAAACAAAGCAACTGATCAAAGCTCTGAGGTGCTTCATGTTAAAATAGGCTCTGTCTaGAAAATCAGTCTGGCACTT | + |
|
Preference number: 2 (lower is better) Translates to: CDMTQNKATDQSSEVLHVKIGSV*KISLAL Trigger: AAGTGCCAGACTGATTTTTCAGACAGAGCCTATTTT...AACATGAAGCACCTCAGAGCTTTGATCAGTTGCTTTGTTTTGTGTCATGTCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR-3UTR TCA 90 bp | GCTTCCCAGGGATTCATTCAAGACAACACTCCATTAACACATACACAGATATTCTACTCGGTGGATTCATaGTTACTCCTATTTCTGAAG | + |
|
Preference number: 2 (lower is better) Translates to: ASQGFIQDNTPLTHTQIFYSVDS*LLLFLK Trigger: CTTCAGAAATAGGAGTAATCATGAATCCACCGAGTA...GAATATCTGTGTATGTGTTAATGGAGTGTTGTCTTGAATGAATCCCTGGGAAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR-3UTR GCA 90 bp | TACTCTATTCCATTTGAAATTATCCCAAGATCGATCCCCTCCCACTTCAAAGGACATTTGAAAGCATCCTaGAGAAAATGGCCTAACAAG | + |
|
Preference number: 2 (lower is better) Translates to: YSIPFEIIPRSIPSHFKGHLKAS*RKWPNK Trigger: CTTGTTAGGCCATTTTCTGCAGGATGCTTTCAAATG...TCCTTTGAAGTGGGAGGGGATCGATCTTGGGATAATTTCAAATGGAATAGAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR-3UTR CCA 90 bp | TCCCACTTCAAAGGACGTCTGAGACACATATTAAATATTTACAGGAACACACAGGAACAAAAAGAATCCTaGAGTCTGCTGTCTTGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: SHFKGRLRHILNIYRNTQEQKES*SLLSCR Trigger: TCTGCAAGACAGCAGACTCCAGGATTCTTTTTGTTC...CTGTGTGTTCCTGTAAATATTTAATATGTGTCTCAGACGTCCTTTGAAGTGGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR-3UTR TCA 90 bp | TCTGGCAGCGACAATCCTAATGACACTTGGAATATTTCTTTACAGCACTATACGTGGTCAACATCAAACTaGCACAAATATGCAAAAAGC | + |
|
Preference number: 2 (lower is better) Translates to: SGSDNPNDTWNISLQHYTWSTSN*HKYAKS Trigger: GCTTTTTGCATATTTGTGTCAGTTTGATGTTGACCA...CGTATAGTGCTGTAAAGAAATATTCCAAGTGTCATTAGGATTGTCGCTGCCAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR CAA 90 bp | ACACTTTTGAATAATAAATACATAAGTGACTATGGAGACATTGGTTaGTTTGAAGAGCCAAGCAATACCCAGTTTCAGTCAGCCCACACA | + |
|
Preference number: 2 (lower is better) Translates to: TLLNNKYISDYGDIG*FEEPSNTQFQSAHT Trigger: TGTGTGGGCTGACTGAAACTGGGTATTGCTTGGCTCTTCAAACAAACCAATGTCTCCATAGTCACTTATGTATTTATTATTCAAAAGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR CAA 90 bp | AATATGAAATCGTGCAATAGGAAAACTGTAGAAACATTAAAACACTaGACTGTCCAACAGCAGCACAAGAGCAGGTTGTTTCTGCACAAA | + |
|
Preference number: 2 (lower is better) Translates to: NMKSCNRKTVETLKH*TVQQQHKSRLFLHK Trigger: TTTGTGCAGAAACAACCTGCTCTTGTGCTGCTGTTGGACAGTCAAGTGTTTTAATGTTTCTACAGTTTTCCTATTGCACGATTTCATATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR-3UTR TCA 90 bp | TTAAAATGGATTTCCCTCTCTGTAAAGAACCAATTAACGATCTATTCACTGTGGAGACATTGGTTTGTTTaGAGAGCCAAGCAATACCCA | + |
|
Preference number: 2 (lower is better) Translates to: LKWISLSVKNQLTIYSLWRHWFV*RAKQYP Trigger: TGGGTATTGCTTGGCTCTTCAAACAAACCAATGTCT...CCACAGTGAATAGATCGTTAATTGGTTCTTTACAGAGAGGGAAATCCATTTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR-3UTR GCA 90 bp | TCTGGCAGCGACAATCCTAATGACACTTGGAATATTTCTTTACAGCACTATACGAATCCAACAGAACTGTaGATTCACAGAGCAATAAAT | + |
|
Preference number: 2 (lower is better) Translates to: SGSDNPNDTWNISLQHYTNPTEL*IHRAIN Trigger: ATTTATTGCTCTGTGAATGCACAGTTCTGTTGGATT...CGTATAGTGCTGTAAAGAAATATTCCAAGTGTCATTAGGATTGTCGCTGCCAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR GCA 72 bp | AAGCAACAGCGAAGCCCGAGGCTCTCCCTTCTTCCCTaGACTCCCCATGGCTTCCCAGGGATTCATTCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: KQQRSPRLSLLP*TPHGFPGIHSR Trigger: TCTTGAATGAATCCCTGGGAAGCCATGGGGAGTGCAGGGAAGAAGGGAGAGCCTCGGGCTTCGCTGTTGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR GCA 72 bp | CATCAAATAAATCAGAAATGGCCACTAGAGGGACTCTaGGCCCACCAGGTAGCCTTCCCTGCCCAGGCACTC | + |
|
Preference number: 3 (lower is better) Translates to: HQINQKWPLEGL*AHQVAFPAQAL Trigger: GAGTGCCTGGGCAGGGAAGGCTACCTGGTGGGCGCAGAGTCCCTCTAGTGGCCATTTCTGATTTATTTGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR-3UTR CAA 90 bp | GCACTCAGGCTTGCTGAGCCCCAGGGAAACAGGGAATCACAGAAGAGTGGTGAGGAGGCCTGTTGGCTATaGGTTGAGAATCCTCTGTAC | + |
|
Preference number: 3 (lower is better) Translates to: ALRLAEPQGNRESQKSGEEACWL*VENPLY Trigger: GTACAGAGGATTCTCAACCAATAGCCAACAGGCCTC...CTCACCACTCTTCTGTGATTCCCTGTTTCCCTGGGGCTCAGCAAGCCTGAGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR GCA 72 bp | GTTGAGAATCCTCTGTACCTGAGCTTCTTTCTCTCATaGCAAGTGGGGGTCCAAGCAACAGCGAAGCCCGAG | + |
|
Preference number: 3 (lower is better) Translates to: VENPLYLSFFLS*QVGVQATAKPE Trigger: CTCGGGCTTCGCTGTTGCTTGGACCCCCACTTGGCATGAGAGAAAGAAGCTCAGGTACAGAGGATTCTCAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR-3UTR CAA 90 bp | GCCCAGGCACTCAGGCTTGCTGAGCCCCAGGGAAACAGGGAATCACAGAAGAGTGAGACATTGGTTTGTTaGAAGAGCCAAGCAATACCC | + |
|
Preference number: 3 (lower is better) Translates to: AQALRLAEPQGNRESQKSETLVC*KSQAIP Trigger: GGGTATTGCTTGGCTCTTCAAACAAACCAATGTCTC...ACTCTTCTGTGATTCCCTGTTTCCCTGGGGCTCAGCAAGCCTGAGTGCCTGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR GCA 72 bp | AAGAGGGCACTGGACCTCCTAAGAGTGAGTGTGAGCTaGCTAATGCAGGTACTAGGAACCAAACTCAGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: KRALDLLRVSVS*LMQVLGTKLRS Trigger: GGACCTGAGTTTGGTTCCTAGTACCTGCATTAGGCAGCTCACACTCACTCTTAGGAGGTCCAGTGCCCTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138845.9 ENSMUST00000162267.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTTGGGGACACACAGACCCAACAGCAGGTCACGCAGTCAGTCACTGCACTCAAGAGACATTGGTTTGTTaGAAGAGCCAAGCAATACCC | + |
|
Preference number: 3 (lower is better) Translates to: CWGHTDPTAGHAVSHCTQETLVC*KSQAIP Trigger: GGGTATTGCTTGGCTCTTCAAACAAACCAATGTCTC...TTGAGTGCAGTGACTGACTGCGTGACCTGCTGTTGGGTCTGTGTGTCCCCAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR TCA 72 bp | AGGCCTGTTGGCTATTGGTTGAGAATCCTCTGTACCTaGGCTTCTTTCTCTCATGCCAAGTGGGGGTCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: RPVGYWLRILCT*ASFSHAKWGSK Trigger: CTTGGACCCCCACTTGGCATGAGAGAAAGAAGCTCAGGTACAGAGGATTCTCAACCAATAGCCAACAGGCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR CCA 72 bp | ATCTCATCTTGCCCAGTCCTTCCGAGTGAGGCCTGTTaGCTATTGGTTGAGAATCCTCTGTACCTGAGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: ISSCPVLPSEAC*LLVENPLYLSF Trigger: GAAGCTCAGGTACAGAGGATTCTCAACCAATAGCCAACAGGCCTCACTCGGAAGGACTGGGCAAGATGAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR TCA 72 bp | GTCAGCCCACACATTTCAGAGCTGCCAAGATGCAGCTaGGGAATCACACTGACAGGTACAACACTCTCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: VSPHISELPRCS*GITLTGTTLSL Trigger: TAGAGAGAGTGTTGTACCTGTCAGTGTGATTCCTCAGCTGCATCTTGGCAGCTCTGAAATGTGTGGGCTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR GCA 72 bp | ATTCTCTCCCCGTGCCCCGTCTCTTTCATGATCTCTTaGACTTACACACACACACACACACACACACACACA | + |
|
Preference number: 3 (lower is better) Translates to: ILSPCPVSFMIS*TYTHTHTHTHT Trigger: TGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAGTGCAAGAGATCATGAAAGAGACGGGGCACGGGGAGAGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR GCA 72 bp | ACAGGAGTACATTTACATTTCAAACACTGCCACAAATaGCAGTCGGACTCTTCTCCTGGACAGAGCGCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: TGVHLHFKHCHK*QSDSSPGQSAP Trigger: TGGGGCGCTCTGTCCAGGAGAAGAGTCCGACTGGCATTTGTGGCAGTGTTTGAAATGTAAATGTACTCCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR CCA 72 bp | AGAGAACTTGCTGTGTGTCATCAAATAAATCAGAAATaGCCACTAGAGGGACTCTGCGCCCACCAGGTAGCC | + |
|
Preference number: 3 (lower is better) Translates to: RELAVCHQINQK*PLEGLCAHQVA Trigger: GGCTACCTGGTGGGCGCAGAGTCCCTCTAGTGGCCATTTCTGATTTATTTGATGACACACAGCAAGTTCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR CCA 72 bp | CAAACACTGCCACAAATGCCAGTCGGACTCTTCTCCTaGACAGAGCGCCCCATCTGTGTATGTATGTTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: QTLPQMPVGLFS*TERPICVCMFV Trigger: AACAAACATACATACACAGATGGGGCGCTCTGTCCAGGAGAAGAGTCCGACTGGCATTTGTGGCAGTGTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR-3UTR CAA 90 bp | TATCCCAAGATCGATCCCCTCCCACTTCAAAGGACGTCTGAGACACATATTAAACTGAGGTGCTTCATGTaGGGGACACACAGACCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: YPKIDPLPLQRTSETHIKLRCFM*GTHRPN Trigger: GTTGGGTCTGTGTGTCCCCAACATGAAGCACCTCAG...TTTAATATGTGTCTCAGACGTCCTTTGAAGTGGGAGGGGATCGATCTTGGGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR TCA 72 bp | AGCTTGCTCAGGAACAACGGCCCTCTGCACTGTTTTTaGGTACCAACTCCAGATTCTTTGACTTACTCGGTG | + |
|
Preference number: 3 (lower is better) Translates to: SLLRNNGPLHCF*VPTPDSLTYSV Trigger: CACCGAGTAAGTCAAAGAATCTGGAGTTGGTACTCAAAAACAGTGCAGAGGGCCGTTGTTCCTGAGCAAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR CCA 72 bp | CCCCAGGGAAACAGGGAATCACAGAAGAGTGGTGAGTaGCCTCAAGTGCCATTCTTGGTCAGTTTAAACATT | + |
|
Preference number: 3 (lower is better) Translates to: PQGNRESQKSGE*PQVPFLVSLNI Trigger: AATGTTTAAACTGACCAAGAATGGCACTTGAGGCCACTCACCACTCTTCTGTGATTCCCTGTTTCCCTGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR-3UTR CAA 90 bp | GCTTCCCAGGGATTCATTCAAGACAACACTCCATTAACACATACACAGATATTCCTGAGGTGCTTCATGTaGGGGACACACAGACCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: ASQGFIQDNTPLTHTQIFLRCFM*GTHRPN Trigger: GTTGGGTCTGTGTGTCCCCAACATGAAGCACCTCAG...GAATATCTGTGTATGTGTTAATGGAGTGTTGTCTTGAATGAATCCCTGGGAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR-3UTR CAA 90 bp | TGTGTGTCATCAAATAAATCAGAAATGGCCACTAGAGGGACTCTGCGCCCACCACTAGAAAACAGAGACTaGAGCAAACTACTGAGGACC | + |
|
Preference number: 3 (lower is better) Translates to: CVSSNKSEMATRGTLRPPLENRD*SKLLRT Trigger: GGTCCTCAGTAGTTTGCTCAAGTCTCTGTTTTCTAG...TGGTGGGCGCAGAGTCCCTCTAGTGGCCATTTCTGATTTATTTGATGACACACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR GCA 72 bp | CAGAGGGTACTGGCAGGGAGACAAACATGTAGTTCTTaGTTGGGTTGGATAAAAGCAGTAAGTTACCCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: QRVLAGRQTCSS*LGWIKAVSYPA Trigger: AGCTGGGTAACTTACTGCTTTTATCCAACCCAAGCAAGAACTACATGTTTGTCTCCCTGCCAGTACCCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR GCA 72 bp | CCTCTAAAAGTAAAACTAAGCATGGCAGCACATGCTTaGAATTTCAGCACTAGGGAGGTAGAGGCCTGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: PLKVKLSMAAHA*NFSTREVEACC Trigger: ACAGCAGGCCTCTACCTCCCTAGTGCTGAAATTGCAAGCATGTGCTGCCATGCTTAGTTTTACTTTTAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000138845.9 ENSMUST00000162267.8 |
||
| 3UTR CCA 72 bp | TGCTGCGGAGCAATCCTAGTCACAGAGCAGCCATTTTaGTGTCTAGAAAACAGAGACTTGAGCAAACTACTG | + |
|
Preference number: 3 (lower is better) Translates to: CCGAILVTEQPF*CLENRDLSKLL Trigger: CAGTAGTTTGCTCAAGTCTCTGTTTTCTAGACACCAAAATGGCTGCTCTGTGACTAGGATTGCTCCGCAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR TCA 72 bp | TTGTTTTCTCAACCGGCCTCTAATCCGTCCTTTCACTaGACAAAAAGAATCCTGGAGTCTGCTGTCTTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: LFSQPASNPSFH*TKRILESAVLQ Trigger: CTGCAAGACAGCAGACTCCAGGATTCTTTTTGTTCAGTGAAAGGACGGATTAGAGGCCGGTTGAGAAAACAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR-3UTR CAA 90 bp | TGTGTGTCATCAAATAAATCAGAAATGGCCACTAGAGGGACTCTGCGCCCACCACCTCAAGTGCCATTCTaGGTCAGTTTAAACATTCAT | + |
|
Preference number: 3 (lower is better) Translates to: CVSSNKSEMATRGTLRPPPQVPF*VSLNIH Trigger: ATGAATGTTTAAACTGACCAAGAATGGCACTTGAGG...TGGTGGGCGCAGAGTCCCTCTAGTGGCCATTTCTGATTTATTTGATGACACACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR CCA 72 bp | CTGGCAGGGAGACAAACATGTAGTTCTTGCTTGGGTTaGATAAAAGCAGTAAGTTACCCAGCTAGAATCTCT | + |
|
Preference number: 3 (lower is better) Translates to: LAGRQTCSSCLG*IKAVSYPARIS Trigger: AGAGATTCTAGCTGGGTAACTTACTGCTTTTATCCAACCCAAGCAAGAACTACATGTTTGTCTCCCTGCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR-3UTR CAA 90 bp | TATCCCAAGATCGATCCCCTCCCACTTCAAAGGACGTCTGAGACACATATTAAAACATGTAGTTCTTGCTaGGGTTGGATAAAAGCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: YPKIDPLPLQRTSETHIKTCSSC*GWIKAV Trigger: TACTGCTTTTATCCAACCCAAGCAAGAACTACATGT...TTTAATATGTGTCTCAGACGTCCTTTGAAGTGGGAGGGGATCGATCTTGGGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR-3UTR CAA 90 bp | TATGGAGACATTGGTTTGTTTGAAGAGCCAAGCAATACCCAGTTTCAGTCAGCCAGCTCTCTGTATCATTaGAAAGCATCCTGCAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: YGDIGLFEEPSNTQFQSASSLYH*KASCRK Trigger: TTTTCTGCAGGATGCTTTCAAATGATACAGAGAGCT...GGCTGACTGAAACTGGGTATTGCTTGGCTCTTCAAACAAACCAATGTCTCCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR-3UTR CAA 90 bp | TCTGGCAGCGACAATCCTAATGACACTTGGAATATTTCTTTACAGCACTATACGGTGACTATGGAGACATaGGTTTGTTTGAAGAGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: SGSDNPNDTWNISLQHYTVTMET*VCLKSQ Trigger: TTGGCTCTTCAAACAAACCAATGTCTCCATAGTCAC...CGTATAGTGCTGTAAAGAAATATTCCAAGTGTCATTAGGATTGTCGCTGCCAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR-3UTR CAA 90 bp | AGATCGATCCCCTCCCACTTCAAAGGACGTCTGAGACACATATTAAATATTTACAGCTCTCTGTATCATTaGAAAGCATCCTGCAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: RSIPSHFKGRLRHILNIYSSLYH*KASCRK Trigger: TTTTCTGCAGGATGCTTTCAAATGATACAGAGAGCT...GTAAATATTTAATATGTGTCTCAGACGTCCTTTGAAGTGGGAGGGGATCGATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR-3UTR CAA 90 bp | GCTTCCCAGGGATTCATTCAAGACAACACTCCATTAACACATACACAGATATTCTATGGAGACATTGGTTaGTTTGAAGAGCCAAGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: ASQGFIQDNTPLTHTQIFYGDIG*FEEPSN Trigger: ATTGCTTGGCTCTTCAAACAAACCAATGTCTCCATA...GAATATCTGTGTATGTGTTAATGGAGTGTTGTCTTGAATGAATCCCTGGGAAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR-3UTR CAA 90 bp | AACCAATTAACGATCTATTCACTGTGGGGAGGAGAATCTCCTTTCTTTACTTTCGTGACTATGGAGACATaGGTTTGTTTGAAGAGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: NQLTIYSLWGGESPFFTFVTMET*VCLKSQ Trigger: TTGGCTCTTCAAACAAACCAATGTCTCCATAGTCAC...GAAAGTAAAGAAAGGAGATTCTCCTCCCCACAGTGAATAGATCGTTAATTGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR TCA 72 bp | CTCTGCACTGTTTTTGAGTACCAACTCCAGATTCTTTaGCTTACTCGGTGGATTCATGATTACTCCTATTTC | + |
|
Preference number: 3 (lower is better) Translates to: LCTVFEYQLQIL*LTRWIHDYSYF Trigger: GAAATAGGAGTAATCATGAATCCACCGAGTAAGTCAAAGAATCTGGAGTTGGTACTCAAAAACAGTGCAGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR-3UTR CAA 90 bp | AACCAATTAACGATCTATTCACTGTGGGGAGGAGAATCTCCTTTCTTTACTTTCTATGGAGACATTGGTTaGTTTGAAGAGCCAAGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: NQLTIYSLWGGESPFFTFYGDIG*FEEPSN Trigger: ATTGCTTGGCTCTTCAAACAAACCAATGTCTCCATA...GAAAGTAAAGAAAGGAGATTCTCCTCCCCACAGTGAATAGATCGTTAATTGGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR TCA 72 bp | GAAAAATCAGTCTGGCACTTGTGGTCAACATCAAACTaGCACAAATATGCAAAAAGCTGTCCAAATCACAAC | + |
|
Preference number: 3 (lower is better) Translates to: EKSVWHLWSTSN*HKYAKSCPNHN Trigger: GTTGTGATTTGGACAGCTTTTTGCATATTTGTGTCAGTTTGATGTTGACCACAAGTGCCAGACTGATTTTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR GCA 90 bp | GCACTCAGGCTTGCTGAGCCCCAGGGAAACAGGGAATCACAGAAGAGTGGTGAGGGGTGTGGTGCTGGGTaGTGGGGACGCTGTGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ALRLAEPQGNRESQKSGEGCGAG*WGRCGC Trigger: GCACCCACAGCGTCCCCAGCACCCAGCACCACACCC...CTCACCACTCTTCTGTGATTCCCTGTTTCCCTGGGGCTCAGCAAGCCTGAGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CCA 90 bp | GCCCAGGCACTCAGGCTTGCTGAGCCCCAGGGAAACAGGGAATCACAGAAGAGTCTGGCTGTGTTGCTGTaGGTGTGGTGCTGGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AQALRLAEPQGNRESQKSLAVLL*VWCWVL Trigger: CAGCACCCAGCACCACACCCACAGCAACACAGCCAG...ACTCTTCTGTGATTCCCTGTTTCCCTGGGGCTCAGCAAGCCTGAGTGCCTGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CCA 90 bp | CACTCAGGCTTGCTGAGCCCCAGGGAAACAGGGAATCACAGAAGAGTGGTGAGTGTATGTGGAGAGGGCTaGGGGTGCATCTGGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HSGLLSPRETGNHRRVVSVCGEG*GCIWGW Trigger: CCACCCCCAGATGCACCCCCAGCCCTCTCCACATAC...ACTCACCACTCTTCTGTGATTCCCTGTTTCCCTGGGGCTCAGCAAGCCTGAGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR TCA 90 bp | GCACTCAGGCTTGCTGAGCCCCAGGGAAACAGGGAATCACAGAAGAGTGGTGAGTGGCTGCTCTCATGGTaGGCTGGGGTAACCAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ALRLAEPQGNRESQKSGEWLLSW*AGVTSP Trigger: TGGACTGGTTACCCCAGCTCACCATGAGAGCAGCCA...CTCACCACTCTTCTGTGATTCCCTGTTTCCCTGGGGCTCAGCAAGCCTGAGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR GCA 90 bp | TGTTGGGGACACACAGACCCAACAGCAGGTCACGCAGTCAGTCACTGCACTCAAGTGTTGGGAAGGCTTTaGTGGGTGCATGGCACCGTG | + |
|
Preference number: 4 (lower is better) Translates to: CWGHTDPTAGHAVSHCTQVLGRL*WVHGTV Trigger: CACGGTGCCATGCACCCAGCAAAGCCTTCCCAACAC...TTGAGTGCAGTGACTGACTGCGTGACCTGCTGTTGGGTCTGTGTGTCCCCAACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR GCA 90 bp | CACTCAGGCTTGCTGAGCCCCAGGGAAACAGGGAATCACAGAAGAGTGGTGAGTGTGTTGGGAAGGCTTTaGTGGGTGCATGGCACCGTG | + |
|
Preference number: 4 (lower is better) Translates to: HSGLLSPRETGNHRRVVSVLGRL*WVHGTV Trigger: CACGGTGCCATGCACCCAGCAAAGCCTTCCCAACAC...ACTCACCACTCTTCTGTGATTCCCTGTTTCCCTGGGGCTCAGCAAGCCTGAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CCA 90 bp | GTTGGGGACACACAGACCCAACAGCAGGTCACGCAGTCAGTCACTGCACTCAAGTCTTGCCCTCTTCTTTaGCCGAGTAGGCAGCGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: VGDTQTQQQVTQSVTALKSCPLL*PSRQRV Trigger: GACACGCTGCCTACTCGGCCAAAGAAGAGGGCAAGA...CTTGAGTGCAGTGACTGACTGCGTGACCTGCTGTTGGGTCTGTGTGTCCCCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR TCA 90 bp | CACATGTGTAAGTGCTCATGGAGGCCAGAAGAGGGCACTGGACCTCCTAAGAGTTGGCTGCTCTCATGGTaGGCTGGGGTAACCAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HMCKCSWRPEEGTGPPKSWLLSW*AGVTSP Trigger: TGGACTGGTTACCCCAGCTCACCATGAGAGCAGCCA...ACTCTTAGGAGGTCCAGTGCCCTCTTCTGGCCTCCATGAGCACTTACACATGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138845.9 ENSMUST00000162267.8 |
||
| CDS-3UTR GCA 90 bp | TGTTGGGGACACACAGACCCAACAGCAGGTCACGCAGTCAGTCACTGCACTCAATGGGAAGGCATCATGTaGTGCTGGTTCATGGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: CWGHTDPTAGHAVSHCTQWEGIM*CWFMAP Trigger: CGGAGCCATGAACCAGCAGCACATGATGCCTTCCCA...TTGAGTGCAGTGACTGACTGCGTGACCTGCTGTTGGGTCTGTGTGTCCCCAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CCA 90 bp | GCCCAGGCACTCAGGCTTGCTGAGCCCCAGGGAAACAGGGAATCACAGAAGAGTGAAGTGTGGGACTGTTaGGAAGATTCCGAAGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: AQALRLAEPQGNRESQKSEVWDC*EDSEGM Trigger: CATCCCTTCGGAATCTTCCCAACAGTCCCACACTTC...ACTCTTCTGTGATTCCCTGTTTCCCTGGGGCTCAGCAAGCCTGAGTGCCTGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CCA 90 bp | TGTTGGGGACACACAGACCCAACAGCAGGTCACGCAGTCAGTCACTGCACTCAAGGCCACTGTGATTGTTaGGCAGGCTGCTTTGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: CWGHTDPTAGHAVSHCTQGHCDC*AGCFGC Trigger: GCAACCAAAGCAGCCTGCCCAACAATCACAGTGGCC...TTGAGTGCAGTGACTGACTGCGTGACCTGCTGTTGGGTCTGTGTGTCCCCAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CCA 90 bp | CACTCAGGCTTGCTGAGCCCCAGGGAAACAGGGAATCACAGAAGAGTGGTGAGTTCTATGGGGTGTATGTaGAGAGGGCTGGGGGTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: HSGLLSPRETGNHRRVVSSMGCM*RGLGVH Trigger: ATGCACCCCCAGCCCTCTCCACATACACCCCATAGA...ACTCACCACTCTTCTGTGATTCCCTGTTTCCCTGGGGCTCAGCAAGCCTGAGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR GCA 90 bp | CCAGAAGAGGGCACTGGACCTCCTAAGAGTGAGTGTGAGCTGCCTAATGCAGGTAGATTTCTGGATGGCTaGTCTCATGGTGAGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PEEGTGPPKSECELPNAGRFLDG*SHGELG Trigger: CCCCAGCTCACCATGAGAGCAGCCATCCAGAAATCT...ACCTGCATTAGGCAGCTCACACTCACTCTTAGGAGGTCCAGTGCCCTCTTCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138845.9 ENSMUST00000162267.8 |
||
| CDS-3UTR GCA 90 bp | GTTAGGAGCTACAGAGGGTACTGGCAGGGAGACAAACATGTAGTTCTTGCTTGGTGGGGACGCTGTGGGTaGTGGGGTAAACCATGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: VRSYRGYWQGDKHVVLAWWGRCG*WGKPCG Trigger: ACCGCATGGTTTACCCCAGCACCCACAGCGTCCCCA...CCAAGCAAGAACTACATGTTTGTCTCCCTGCCAGTACCCTCTGTAGCTCCTAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CCA 90 bp | GCACTCAGGCTTGCTGAGCCCCAGGGAAACAGGGAATCACAGAAGAGTGGTGAGGCTCTCATGGTGAGCTaGGGTAACCAGTCCATAGAT | + |
|
Preference number: 4 (lower is better) Translates to: ALRLAEPQGNRESQKSGEALMVS*GNQSID Trigger: ATCTATGGACTGGTTACCCCAGCTCACCATGAGAGC...CTCACCACTCTTCTGTGATTCCCTGTTTCCCTGGGGCTCAGCAAGCCTGAGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CCA 90 bp | CAGTCGGACTCTTCTCCTGGACAGAGCGCCCCATCTGTGTATGTATGTTTGTTACCTGCCCCGATGTGTTaGGAAGGCTTTGCTGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: QSDSSPGQSAPSVYVCLLPAPMC*EGFAGC Trigger: GCACCCAGCAAAGCCTTCCCAACACATCGGGGCAGG...TAACAAACATACATACACAGATGGGGCGCTCTGTCCAGGAGAAGAGTCCGACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CCA 90 bp | GCACTCAGGCTTGCTGAGCCCCAGGGAAACAGGGAATCACAGAAGAGTGGTGAGGTTGATTGCCAGAGTTaGAGAGGCACTTCCCGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: ALRLAEPQGNRESQKSGEVDCQS*RGTSRN Trigger: ATTTCGGGAAGTGCCTCTCCAACTCTGGCAATCAAC...CTCACCACTCTTCTGTGATTCCCTGTTTCCCTGGGGCTCAGCAAGCCTGAGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044564.15 |
||
| CDS-3UTR CCA 90 bp | CACTCAGGCTTGCTGAGCCCCAGGGAAACAGGGAATCACAGAAGAGTGGTGAGTCTGAGAGACTGGTTCTaGATGGTTAGTGACCGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: HSGLLSPRETGNHRRVVSLRDWF*MVSDRC Trigger: ACACCGGTCACTAACCATCCAGAACCAGTCTCTCAG...ACTCACCACTCTTCTGTGATTCCCTGTTTCCCTGGGGCTCAGCAAGCCTGAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR TCA 90 bp | CAGGGAAACAGGGAATCACAGAAGAGTGGTGAGTGGCCTCAAGTGCCATTCTTGTGGTTGCTGTGTGGGTaGGAGGTCACTGTACTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: QGNRESQKSGEWPQVPFLWLLCG*EVTVLL Trigger: TAGCAGTACAGTGACCTCTCACCCACACAGCAACCA...CAAGAATGGCACTTGAGGCCACTCACCACTCTTCTGTGATTCCCTGTTTCCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CCA 90 bp | CACATGTGTAAGTGCTCATGGAGGCCAGAAGAGGGCACTGGACCTCCTAAGAGTGCTCTCATGGTGAGCTaGGGTAACCAGTCCATAGAT | + |
|
Preference number: 4 (lower is better) Translates to: HMCKCSWRPEEGTGPPKSALMVS*GNQSID Trigger: ATCTATGGACTGGTTACCCCAGCTCACCATGAGAGC...ACTCTTAGGAGGTCCAGTGCCCTCTTCTGGCCTCCATGAGCACTTACACATGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138845.9 ENSMUST00000162267.8 |
||
| CDS-3UTR CCA 90 bp | GCCCAGGCACTCAGGCTTGCTGAGCCCCAGGGAAACAGGGAATCACAGAAGAGTCTATCACTACCATCCTaGTCAGCGTTGTACAATGTT | + |
|
Preference number: 4 (lower is better) Translates to: AQALRLAEPQGNRESQKSLSLPS*SALYNV Trigger: AACATTGTACAACGCTGACCAGGATGGTAGTGATAG...ACTCTTCTGTGATTCCCTGTTTCCCTGGGGCTCAGCAAGCCTGAGTGCCTGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CCA 90 bp | GCCCAGGCACTCAGGCTTGCTGAGCCCCAGGGAAACAGGGAATCACAGAAGAGTTTGTTTTTCTCGTTCTaGAAGGTTGTACTGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AQALRLAEPQGNRESQKSLFFSF*KVVLWL Trigger: CAGCCACAGTACAACCTTCCAGAACGAGAAAAACAA...ACTCTTCTGTGATTCCCTGTTTCCCTGGGGCTCAGCAAGCCTGAGTGCCTGGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CCA 90 bp | GTTAGGAGCTACAGAGGGTACTGGCAGGGAGACAAACATGTAGTTCTTGCTTGGTTGGGAAGGCTTTGCTaGGTGCATGGCACCGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: VRSYRGYWQGDKHVVLAWLGRLC*VHGTVT Trigger: TGTCACGGTGCCATGCACCCAGCAAAGCCTTCCCAA...CCAAGCAAGAACTACATGTTTGTCTCCCTGCCAGTACCCTCTGTAGCTCCTAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CCA 90 bp | TGTGTGTCATCAAATAAATCAGAAATGGCCACTAGAGGGACTCTGCGCCCACCACGCATCGGGAAGGCTTaGGAAGGCATCATGTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CVSSNKSEMATRGTLRPPRIGKA*EGIMCC Trigger: GCAGCACATGATGCCTTCCCAAGCCTTCCCGATGCG...TGGTGGGCGCAGAGTCCCTCTAGTGGCCATTTCTGATTTATTTGATGACACACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR TCA 90 bp | CAGGGAAACAGGGAATCACAGAAGAGTGGTGAGTGGCCTCAAGTGCCATTCTTGCTAATGACCAGTTCTTaGGATCCGCCTGCCTCATAC | + |
|
Preference number: 4 (lower is better) Translates to: QGNRESQKSGEWPQVPFLLMTSS*DPPASY Trigger: GTATGAGGCAGGCGGATCTCAAGAACTGGTCATTAG...CAAGAATGGCACTTGAGGCCACTCACCACTCTTCTGTGATTCCCTGTTTCCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR GCA 90 bp | AAACACTGCCACAAATGCCAGTCGGACTCTTCTCCTGGACAGAGCGCCCCATCTGGTTTTCCATCTTTGTaGTGTTGGACTTCTTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KHCHKCQSDSSPGQSAPSGFPSL*CWTSSW Trigger: CCAGGAAGAAGTCCAACAGCACAAAGATGGAAAACC...AGATGGGGCGCTCTGTCCAGGAGAAGAGTCCGACTGGCATTTGTGGCAGTGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CCA 90 bp | CAGGGAAACAGGGAATCACAGAAGAGTGGTGAGTGGCCTCAAGTGCCATTCTTGGCTCTCATGGTGAGCTaGGGTAACCAGTCCATAGAT | + |
|
Preference number: 4 (lower is better) Translates to: QGNRESQKSGEWPQVPFLALMVS*GNQSID Trigger: ATCTATGGACTGGTTACCCCAGCTCACCATGAGAGC...CAAGAATGGCACTTGAGGCCACTCACCACTCTTCTGTGATTCCCTGTTTCCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CCA 90 bp | CAGGGAAACAGGGAATCACAGAAGAGTGGTGAGTGGCCTCAAGTGCCATTCTTGGCTTTGGTTGCTGTGTaGGTGAGAGGTCACTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: QGNRESQKSGEWPQVPFLALVAV*VRGHCT Trigger: AGTACAGTGACCTCTCACCCACACAGCAACCAAAGC...CAAGAATGGCACTTGAGGCCACTCACCACTCTTCTGTGATTCCCTGTTTCCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CCA 90 bp | TGGTGTCTAGAAAACAGAGACTTGAGCAAACTACTGAGGACCTCATTTTCCCAAGGGTGCATCTGGGGGTaGGACAGCGAGACCTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: WCLENRDLSKLLRTSFSQGCIWG*DSETCA Trigger: TGCACAGGTCTCGCTGTCCCACCCCCAGATGCACCC...TTGGGAAAATGAGGTCCTCAGTAGTTTGCTCAAGTCTCTGTTTTCTAGACACCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CCA 90 bp | AAGCTTGCTCAGGAACAACGGCCCTCTGCACTGTTTTTGAGTACCAACTCCAGAAAACCATGCGGTCTATaGGGTGTATGTGGAGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KLAQEQRPSALFLSTNSRKPCGL*GVCGEG Trigger: GCCCTCTCCACATACACCCCATAGACCGCATGGTTT...TCTGGAGTTGGTACTCAAAAACAGTGCAGAGGGCCGTTGTTCCTGAGCAAGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CCA 90 bp | TATCCCAAGATCGATCCCCTCCCACTTCAAAGGACGTCTGAGACACATATTAAACCTGCCCCGATGTGTTaGGAAGGCTTTGCTGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: YPKIDPLPLQRTSETHIKPAPMC*EGFAGC Trigger: GCACCCAGCAAAGCCTTCCCAACACATCGGGGCAGG...TTTAATATGTGTCTCAGACGTCCTTTGAAGTGGGAGGGGATCGATCTTGGGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR CAA 72 bp | ACAAAGCAACTGATCAAAGCTCTGAGGTGCTTCATGTaGGGGACACACAGACCCAACAGCAGGTCACGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TKQLIKALRCFM*GTHRPNSRSRS Trigger: ACTGCGTGACCTGCTGTTGGGTCTGTGTGTCCCCAACATGAAGCACCTCAGAGCTTTGATCAGTTGCTTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR TCA 90 bp | TGTTGGCTATTGGTTGAGAATCCTCTGTACCTGAGCTTCTTTCTCTCATGCCAATGGCTGCTCTCATGGTaGGCTGGGGTAACCAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CWLLVENPLYLSFFLSCQWLLSW*AGVTSP Trigger: TGGACTGGTTACCCCAGCTCACCATGAGAGCAGCCA...TTGGCATGAGAGAAAGAAGCTCAGGTACAGAGGATTCTCAACCAATAGCCAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR TCA 90 bp | CAGTCGGACTCTTCTCCTGGACAGAGCGCCCCATCTGTGTATGTATGTTTGTTACGCCAAACTCTGGTCTaGGAGACTGTTGTTAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QSDSSPGQSAPSVYVCLLRQTLV*ETVVKA Trigger: AGCCTTAACAACAGTCTCTCAGACCAGAGTTTGGCG...TAACAAACATACATACACAGATGGGGCGCTCTGTCCAGGAGAAGAGTCCGACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR TCA 90 bp | GCCCAGGCACTCAGGCTTGCTGAGCCCCAGGGAAACAGGGAATCACAGAAGAGTTCCGAAATGAGGCACTaGGATCTTCAAAATTGTATT | + |
|
Preference number: 4 (lower is better) Translates to: AQALRLAEPQGNRESQKSSEMRH*DLQNCI Trigger: AATACAATTTTGAAGATCTCAGTGCCTCATTTCGGA...ACTCTTCTGTGATTCCCTGTTTCCCTGGGGCTCAGCAAGCCTGAGTGCCTGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR GCA 90 bp | ATCAAAGCTCTGAGGTGCTTCATGTTGGGGACACACAGACCCAACAGCAGGTCACGGATTGGTGTCTATTaGCCAGTAAGAACCCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: IKALRCFMLGTHRPNSRSRIGVY*PVRTLS Trigger: GGAAAGGGTTCTTACTGGGCAATAGACACCAATCCG...TGACCTGCTGTTGGGTCTGTGTGTCCCCAACATGAAGCACCTCAGAGCTTTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR GCA 90 bp | AAGCTTGCTCAGGAACAACGGCCCTCTGCACTGTTTTTGAGTACCAACTCCAGATGCTGGGGTAAACCATaGGGTCTATGGGGTGTATGT | + |
|
Preference number: 4 (lower is better) Translates to: KLAQEQRPSALFLSTNSRCWGKP*GLWGVC Trigger: ACATACACCCCATAGACCGCATGGTTTACCCCAGCA...TCTGGAGTTGGTACTCAAAAACAGTGCAGAGGGCCGTTGTTCCTGAGCAAGCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CCA 90 bp | AGTCAGTCACTGCACTCAAGACTGAAGCAGATAAGACTCTGGAGCTGCATGCAGGAAGTGTGGGACTGTTaGGAAGATTCCGAAGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: SQSLHSRLKQIRLWSCMQEVWDC*EDSEGM Trigger: CATCCCTTCGGAATCTTCCCAACAGTCCCACACTTC...CTGCATGCAGCTCCAGAGTCTTATCTGCTTCAGTCTTGAGTGCAGTGACTGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CCA 90 bp | AGTCAGTCACTGCACTCAAGACTGAAGCAGATAAGACTCTGGAGCTGCATGCAGGCTTTGGTTGCTGTGTaGGTGAGAGGTCACTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: SQSLHSRLKQIRLWSCMQALVAV*VRGHCT Trigger: AGTACAGTGACCTCTCACCCACACAGCAACCAAAGC...CTGCATGCAGCTCCAGAGTCTTATCTGCTTCAGTCTTGAGTGCAGTGACTGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CCA 90 bp | AGATCGATCCCCTCCCACTTCAAAGGACGTCTGAGACACATATTAAATATTTACGGGTGCATCTGGGGGTaGGACAGCGAGACCTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RSIPSHFKGRLRHILNIYGCIWG*DSETCA Trigger: TGCACAGGTCTCGCTGTCCCACCCCCAGATGCACCC...GTAAATATTTAATATGTGTCTCAGACGTCCTTTGAAGTGGGAGGGGATCGATCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CCA 90 bp | GCTTCCCAGGGATTCATTCAAGACAACACTCCATTAACACATACACAGATATTCGTATGTGGAGAGGGCTaGGGGTGCATCTGGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ASQGFIQDNTPLTHTQIFVCGEG*GCIWGW Trigger: CCACCCCCAGATGCACCCCCAGCCCTCTCCACATAC...GAATATCTGTGTATGTGTTAATGGAGTGTTGTCTTGAATGAATCCCTGGGAAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CCA 90 bp | TGTTGGCTATTGGTTGAGAATCCTCTGTACCTGAGCTTCTTTCTCTCATGCCAACGCATCGGGAAGGCTTaGGAAGGCATCATGTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CWLLVENPLYLSFFLSCQRIGKA*EGIMCC Trigger: GCAGCACATGATGCCTTCCCAAGCCTTCCCGATGCG...TTGGCATGAGAGAAAGAAGCTCAGGTACAGAGGATTCTCAACCAATAGCCAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CCA 90 bp | TATCCCAAGATCGATCCCCTCCCACTTCAAAGGACGTCTGAGACACATATTAAAATCCTGGATGTCATCTaGAGGCAGAGGGCGCCGCAT | + |
|
Preference number: 4 (lower is better) Translates to: YPKIDPLPLQRTSETHIKILDVI*RQRAPH Trigger: ATGCGGCGCCCTCTGCCTCCAGATGACATCCAGGAT...TTTAATATGTGTCTCAGACGTCCTTTGAAGTGGGAGGGGATCGATCTTGGGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR TCA 90 bp | GTTGGGGACACACAGACCCAACAGCAGGTCACGCAGTCAGTCACTGCACTCAAGCTCATTAAACCTTGTTaGCTAAGTGACTGCTCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: VGDTQTQQQVTQSVTALKLIKPC*LSDCSK Trigger: TTTTGAGCAGTCACTTAGTCAACAAGGTTTAATGAG...CTTGAGTGCAGTGACTGACTGCGTGACCTGCTGTTGGGTCTGTGTGTCCCCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR GCA 90 bp | AGTCAGTCACTGCACTCAAGACTGAAGCAGATAAGACTCTGGAGCTGCATGCAGCGGATTGGTGTCTATTaGCCAGTAAGAACCCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SQSLHSRLKQIRLWSCMQRIGVY*PVRTLS Trigger: GGAAAGGGTTCTTACTGGGCAATAGACACCAATCCG...CTGCATGCAGCTCCAGAGTCTTATCTGCTTCAGTCTTGAGTGCAGTGACTGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR GCA 90 bp | TTAAAATGGATTTCCCTCTCTGTAAAGAACCAATTAACGATCTATTCACTGTGGGGGTGTGGTGCTGGGTaGTGGGGACGCTGTGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LKWISLSVKNQLTIYSLWGCGAG*WGRCGC Trigger: GCACCCACAGCGTCCCCAGCACCCAGCACCACACCC...CCACAGTGAATAGATCGTTAATTGGTTCTTTACAGAGAGGGAAATCCATTTTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR GCA 90 bp | TGTGTGTCATCAAATAAATCAGAAATGGCCACTAGAGGGACTCTGCGCCCACCATGCGGAACATTACTCTaGGAGTGGATAAGGCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: CVSSNKSEMATRGTLRPPCGTLL*EWIRPV Trigger: GACTGGCCTTATCCACTCGCAGAGTAATGTTCCGCA...TGGTGGGCGCAGAGTCCCTCTAGTGGCCATTTCTGATTTATTTGATGACACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR GCA 90 bp | ATTTACATTTCAAACACTGCCACAAATGCCAGTCGGACTCTTCTCCTGGACAGATGGGAAGGCATCATGTaGTGCTGGTTCATGGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: IYISNTATNASRTLLLDRWEGIM*CWFMAP Trigger: CGGAGCCATGAACCAGCAGCACATGATGCCTTCCCA...TCTGTCCAGGAGAAGAGTCCGACTGGCATTTGTGGCAGTGTTTGAAATGTAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CCA 90 bp | GCTTGCAATTTCAGCACTAGGGAGGTAGAGGCCTGCTGTAAGTTCAAGGCTCTCTGTTGGACTTCTTCCTaGTCCAGTGTTGTATTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ACNFSTREVEACCKFKALCWTSS*SSVVFG Trigger: CCCAAATACAACACTGGACCAGGAAGAAGTCCAACA...GAGAGCCTTGAACTTACAGCAGGCCTCTACCTCCCTAGTGCTGAAATTGCAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138845.9 ENSMUST00000162267.8 |
||
| CDS-3UTR CCA 90 bp | AAGCTTGCTCAGGAACAACGGCCCTCTGCACTGTTTTTGAGTACCAACTCCAGACCATCTTTGTGCTGTTaGACTTCTTCCTGGTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KLAQEQRPSALFLSTNSRPSLCC*TSSWSS Trigger: ACTGGACCAGGAAGAAGTCCAACAGCACAAAGATGG...TCTGGAGTTGGTACTCAAAAACAGTGCAGAGGGCCGTTGTTCCTGAGCAAGCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CCA 90 bp | TATCCCAAGATCGATCCCCTCCCACTTCAAAGGACGTCTGAGACACATATTAAAGGCCACTGTGATTGTTaGGCAGGCTGCTTTGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: YPKIDPLPLQRTSETHIKGHCDC*AGCFGC Trigger: GCAACCAAAGCAGCCTGCCCAACAATCACAGTGGCC...TTTAATATGTGTCTCAGACGTCCTTTGAAGTGGGAGGGGATCGATCTTGGGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR TCA 90 bp | CTACTTCCTCTAAAAGTAAAACTAAGCATGGCAGCACATGCTTGCAATTTCAGCTGGCTGCTCTCATGGTaGGCTGGGGTAACCAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLPLKVKLSMAAHACNFSWLLSW*AGVTSP Trigger: TGGACTGGTTACCCCAGCTCACCATGAGAGCAGCCA...GCTGAAATTGCAAGCATGTGCTGCCATGCTTAGTTTTACTTTTAGAGGAAGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000138845.9 ENSMUST00000162267.8 |
||
| CDS-3UTR TCA 90 bp | ATCAAAGCTCTGAGGTGCTTCATGTTGGGGACACACAGACCCAACAGCAGGTCAGTCTGTGTGAAGAACTaGTTAAGAGAGGAACAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: IKALRCFMLGTHRPNSRSVCVKN*LREEQR Trigger: TCTCTGTTCCTCTCTTAATCAGTTCTTCACACAGAC...TGACCTGCTGTTGGGTCTGTGTGTCCCCAACATGAAGCACCTCAGAGCTTTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR GCA 90 bp | TATCCCAAGATCGATCCCCTCCCACTTCAAAGGACGTCTGAGACACATATTAAAAGATTTCTGGATGGCTaGTCTCATGGTGAGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: YPKIDPLPLQRTSETHIKRFLDG*SHGELG Trigger: CCCCAGCTCACCATGAGAGCAGCCATCCAGAAATCT...TTTAATATGTGTCTCAGACGTCCTTTGAAGTGGGAGGGGATCGATCTTGGGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR GCA 90 bp | TATCCCAAGATCGATCCCCTCCCACTTCAAAGGACGTCTGAGACACATATTAAAGATTGTTGGGCAGGCTaGTTTGGTTGCTGTGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: YPKIDPLPLQRTSETHIKDCWAG*FGCCVG Trigger: ACCCACACAGCAACCAAAGCAGCCTGCCCAACAATC...TTTAATATGTGTCTCAGACGTCCTTTGAAGTGGGAGGGGATCGATCTTGGGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR GCA 90 bp | AACCAATTAACGATCTATTCACTGTGGGGAGGAGAATCTCCTTTCTTTACTTTCTGGGGACGCTGTGGGTaGTGGGGTAAACCATGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: NQLTIYSLWGGESPFFTFWGRCG*WGKPCG Trigger: ACCGCATGGTTTACCCCAGCACCCACAGCGTCCCCA...GAAAGTAAAGAAAGGAGATTCTCCTCCCCACAGTGAATAGATCGTTAATTGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR GCA 90 bp | GTTAGGAGCTACAGAGGGTACTGGCAGGGAGACAAACATGTAGTTCTTGCTTGGGAGGGAGGGAGACTTTaGCTGGAATCTATGTACAAA | + |
|
Preference number: 4 (lower is better) Translates to: VRSYRGYWQGDKHVVLAWEGGRL*LESMYK Trigger: TTTGTACATAGATTCCAGGCAAAGTCTCCCTCCCTC...CCAAGCAAGAACTACATGTTTGTCTCCCTGCCAGTACCCTCTGTAGCTCCTAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CCA 90 bp | AGTCAGTCACTGCACTCAAGACTGAAGCAGATAAGACTCTGGAGCTGCATGCAGTGTTGGACTTCTTCCTaGTCCAGTGTTGTATTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SQSLHSRLKQIRLWSCMQCWTSS*SSVVFG Trigger: CCCAAATACAACACTGGACCAGGAAGAAGTCCAACA...CTGCATGCAGCTCCAGAGTCTTATCTGCTTCAGTCTTGAGTGCAGTGACTGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CCA 90 bp | GCTTCCCAGGGATTCATTCAAGACAACACTCCATTAACACATACACAGATATTCGGACGCTGTGGGTGCTaGGGTAAACCATGCGGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: ASQGFIQDNTPLTHTQIFGRCGC*GKPCGL Trigger: TAGACCGCATGGTTTACCCCAGCACCCACAGCGTCC...GAATATCTGTGTATGTGTTAATGGAGTGTTGTCTTGAATGAATCCCTGGGAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CCA 90 bp | TCTGGCAGCGACAATCCTAATGACACTTGGAATATTTCTTTACAGCACTATACGGGACGCTGTGGGTGCTaGGGTAAACCATGCGGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: SGSDNPNDTWNISLQHYTGRCGC*GKPCGL Trigger: TAGACCGCATGGTTTACCCCAGCACCCACAGCGTCC...CGTATAGTGCTGTAAAGAAATATTCCAAGTGTCATTAGGATTGTCGCTGCCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CCA 90 bp | TGGTGTCTAGAAAACAGAGACTTGAGCAAACTACTGAGGACCTCATTTTCCCAATGTGCTGCTGGTTCATaGCTCCGTGATGACCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: WCLENRDLSKLLRTSFSQCAAGS*LRDDLP Trigger: TGGCAGGTCATCACGGAGCCATGAACCAGCAGCACA...TTGGGAAAATGAGGTCCTCAGTAGTTTGCTCAAGTCTCTGTTTTCTAGACACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CCA 90 bp | AGATCGATCCCCTCCCACTTCAAAGGACGTCTGAGACACATATTAAATATTTACATCCTGGATGTCATCTaGAGGCAGAGGGCGCCGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RSIPSHFKGRLRHILNIYILDVI*RQRAPH Trigger: ATGCGGCGCCCTCTGCCTCCAGATGACATCCAGGAT...GTAAATATTTAATATGTGTCTCAGACGTCCTTTGAAGTGGGAGGGGATCGATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR TCA 90 bp | TATGGAGACATTGGTTTGTTTGAAGAGCCAAGCAATACCCAGTTTCAGTCAGCCCGCCAAACTCTGGTCTaGGAGACTGTTGTTAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: YGDIGLFEEPSNTQFQSARQTLV*ETVVKA Trigger: AGCCTTAACAACAGTCTCTCAGACCAGAGTTTGGCG...GGCTGACTGAAACTGGGTATTGCTTGGCTCTTCAAACAAACCAATGTCTCCATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR TCA 90 bp | TATGGAGACATTGGTTTGTTTGAAGAGCCAAGCAATACCCAGTTTCAGTCAGCCCTAATGACCAGTTCTTaGGATCCGCCTGCCTCATAC | + |
|
Preference number: 4 (lower is better) Translates to: YGDIGLFEEPSNTQFQSALMTSS*DPPASY Trigger: GTATGAGGCAGGCGGATCTCAAGAACTGGTCATTAG...GGCTGACTGAAACTGGGTATTGCTTGGCTCTTCAAACAAACCAATGTCTCCATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR GCA 90 bp | AAGAGGGCACTGGACCTCCTAAGAGTGAGTGTGAGCTGCCTAATGCAGGTACTAAATTCTTCCAACCACTaGCAGCTTCTCTATAATACG | + |
|
Preference number: 4 (lower is better) Translates to: KRALDLLRVSVSCLMQVLNSSNH*QLLYNT Trigger: CGTATTATAGAGAAGCTGGCAGTGGTTGGAAGAATT...TAGTACCTGCATTAGGCAGCTCACACTCACTCTTAGGAGGTCCAGTGCCCTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138845.9 ENSMUST00000162267.8 |
||
| CDS-3UTR GCA 90 bp | TATCCCAAGATCGATCCCCTCCCACTTCAAAGGACGTCTGAGACACATATTAAAGGACAGCGAGACCTGTaGAACCGAATTACTACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: YPKIDPLPLQRTSETHIKGQRDL*NRITTC Trigger: ACAGGTAGTAATTCGGTTGCACAGGTCTCGCTGTCC...TTTAATATGTGTCTCAGACGTCCTTTGAAGTGGGAGGGGATCGATCTTGGGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR GCA 90 bp | ATTTACATTTCAAACACTGCCACAAATGCCAGTCGGACTCTTCTCCTGGACAGATGCGGAACATTACTCTaGGAGTGGATAAGGCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: IYISNTATNASRTLLLDRCGTLL*EWIRPV Trigger: GACTGGCCTTATCCACTCGCAGAGTAATGTTCCGCA...TCTGTCCAGGAGAAGAGTCCGACTGGCATTTGTGGCAGTGTTTGAAATGTAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CCA 90 bp | AAGCTTGCTCAGGAACAACGGCCCTCTGCACTGTTTTTGAGTACCAACTCCAGACTATCACTACCATCCTaGTCAGCGTTGTACAATGTT | + |
|
Preference number: 4 (lower is better) Translates to: KLAQEQRPSALFLSTNSRLSLPS*SALYNV Trigger: AACATTGTACAACGCTGACCAGGATGGTAGTGATAG...TCTGGAGTTGGTACTCAAAAACAGTGCAGAGGGCCGTTGTTCCTGAGCAAGCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CCA 90 bp | TCTGGCAGCGACAATCCTAATGACACTTGGAATATTTCTTTACAGCACTATACGTCTATGGGGTGTATGTaGAGAGGGCTGGGGGTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SGSDNPNDTWNISLQHYTSMGCM*RGLGVH Trigger: ATGCACCCCCAGCCCTCTCCACATACACCCCATAGA...CGTATAGTGCTGTAAAGAAATATTCCAAGTGTCATTAGGATTGTCGCTGCCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CCA 90 bp | TCTGGCAGCGACAATCCTAATGACACTTGGAATATTTCTTTACAGCACTATACGTTGGGAAGGCTTTGCTaGGTGCATGGCACCGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: SGSDNPNDTWNISLQHYTLGRLC*VHGTVT Trigger: TGTCACGGTGCCATGCACCCAGCAAAGCCTTCCCAA...CGTATAGTGCTGTAAAGAAATATTCCAAGTGTCATTAGGATTGTCGCTGCCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR CAA 72 bp | CTGCTGCGGAGCAATCCTAGTCACAGAGCAGCCATTTaGGTGTCTAGAAAACAGAGACTTGAGCAAACTACT | + |
|
Preference number: 4 (lower is better) Translates to: LLRSNPSHRAAI*VSRKQRLEQTT Trigger: AGTAGTTTGCTCAAGTCTCTGTTTTCTAGACACCAAAATGGCTGCTCTGTGACTAGGATTGCTCCGCAGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR TCA 90 bp | ATCAAAGCTCTGAGGTGCTTCATGTTGGGGACACACAGACCCAACAGCAGGTCACATTCCCAAAGAATCTaGATCTATGCTATATGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: IKALRCFMLGTHRPNSRSHSQRI*IYAIWS Trigger: ACTCCATATAGCATAGATTCAGATTCTTTGGGAATG...TGACCTGCTGTTGGGTCTGTGTGTCCCCAACATGAAGCACCTCAGAGCTTTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044564.15 |
||
| CDS-3UTR TCA 90 bp | TGTGACATGACACAAAACAAAGCAACTGATCAAAGCTCTGAGGTGCTTCATGTTTGGTTGCTGTGTGGGTaGGAGGTCACTGTACTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: CDMTQNKATDQSSEVLHVWLLCG*EVTVLL Trigger: TAGCAGTACAGTGACCTCTCACCCACACAGCAACCA...AACATGAAGCACCTCAGAGCTTTGATCAGTTGCTTTGTTTTGTGTCATGTCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR TCA 90 bp | GCTTCCCAGGGATTCATTCAAGACAACACTCCATTAACACATACACAGATATTCTACTACCTGTGGCACTaGGGCCACTGTGATTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ASQGFIQDNTPLTHTQIFYYLWH*GHCDCW Trigger: CCAACAATCACAGTGGCCTCAGTGCCACAGGTAGTA...GAATATCTGTGTATGTGTTAATGGAGTGTTGTCTTGAATGAATCCCTGGGAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR TCA 90 bp | TCTGGCAGCGACAATCCTAATGACACTTGGAATATTTCTTTACAGCACTATACGTACTACCTGTGGCACTaGGGCCACTGTGATTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SGSDNPNDTWNISLQHYTYYLWH*GHCDCW Trigger: CCAACAATCACAGTGGCCTCAGTGCCACAGGTAGTA...CGTATAGTGCTGTAAAGAAATATTCCAAGTGTCATTAGGATTGTCGCTGCCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR TCA 90 bp | AAGCTTGCTCAGGAACAACGGCCCTCTGCACTGTTTTTGAGTACCAACTCCAGATGCATACCAATCACTTaGAACACCAGAATTACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KLAQEQRPSALFLSTNSRCIPIT*NTRITG Trigger: TCCTGTAATTCTGGTGTTTCAAGTGATTGGTATGCA...TCTGGAGTTGGTACTCAAAAACAGTGCAGAGGGCCGTTGTTCCTGAGCAAGCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR GCA 90 bp | AAGCTTGCTCAGGAACAACGGCCCTCTGCACTGTTTTTGAGTACCAACTCCAGAAATTCTTCCAACCACTaGCAGCTTCTCTATAATACG | + |
|
Preference number: 4 (lower is better) Translates to: KLAQEQRPSALFLSTNSRNSSNH*QLLYNT Trigger: CGTATTATAGAGAAGCTGGCAGTGGTTGGAAGAATT...TCTGGAGTTGGTACTCAAAAACAGTGCAGAGGGCCGTTGTTCCTGAGCAAGCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR GCA 90 bp | AAACTAAGCATGGCAGCACATGCTTGCAATTTCAGCACTAGGGAGGTAGAGGCCAATTCTTCCAACCACTaGCAGCTTCTCTATAATACG | + |
|
Preference number: 4 (lower is better) Translates to: KLSMAAHACNFSTREVEANSSNH*QLLYNT Trigger: CGTATTATAGAGAAGCTGGCAGTGGTTGGAAGAATT...GGCCTCTACCTCCCTAGTGCTGAAATTGCAAGCATGTGCTGCCATGCTTAGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138845.9 ENSMUST00000162267.8 |
||
| CDS-3UTR GCA 90 bp | AGATCGATCCCCTCCCACTTCAAAGGACGTCTGAGACACATATTAAATATTTACGATTGTTGGGCAGGCTaGTTTGGTTGCTGTGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RSIPSHFKGRLRHILNIYDCWAG*FGCCVG Trigger: ACCCACACAGCAACCAAAGCAGCCTGCCCAACAATC...GTAAATATTTAATATGTGTCTCAGACGTCCTTTGAAGTGGGAGGGGATCGATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CCA 90 bp | TATGGAGACATTGGTTTGTTTGAAGAGCCAAGCAATACCCAGTTTCAGTCAGCCGTAGCATCAGATTTCTaGATGGCTGCTCTCATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: YGDIGLFEEPSNTQFQSAVASDF*MAALMV Trigger: CACCATGAGAGCAGCCATCCAGAAATCTGATGCTAC...GGCTGACTGAAACTGGGTATTGCTTGGCTCTTCAAACAAACCAATGTCTCCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CCA 90 bp | TCCCACTTCAAAGGACGTCTGAGACACATATTAAATATTTACAGGAACACACAGTCTTGCCCTCTTCTTTaGCCGAGTAGGCAGCGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SHFKGRLRHILNIYRNTQSCPLL*PSRQRV Trigger: GACACGCTGCCTACTCGGCCAAAGAAGAGGGCAAGA...CTGTGTGTTCCTGTAAATATTTAATATGTGTCTCAGACGTCCTTTGAAGTGGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CCA 90 bp | TGTGACATGACACAAAACAAAGCAACTGATCAAAGCTCTGAGGTGCTTCATGTTAAACCATGCGGTCTATaGGGTGTATGTGGAGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CDMTQNKATDQSSEVLHVKPCGL*GVCGEG Trigger: GCCCTCTCCACATACACCCCATAGACCGCATGGTTT...AACATGAAGCACCTCAGAGCTTTGATCAGTTGCTTTGTTTTGTGTCATGTCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CCA 90 bp | TTAAAATGGATTTCCCTCTCTGTAAAGAACCAATTAACGATCTATTCACTGTGGCTGGCTGTGTTGCTGTaGGTGTGGTGCTGGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LKWISLSVKNQLTIYSLWLAVLL*VWCWVL Trigger: CAGCACCCAGCACCACACCCACAGCAACACAGCCAG...CCACAGTGAATAGATCGTTAATTGGTTCTTTACAGAGAGGGAAATCCATTTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CCA 90 bp | TATGGAGACATTGGTTTGTTTGAAGAGCCAAGCAATACCCAGTTTCAGTCAGCCACATTACTCTGCGAGTaGATAAGGCCAGTCTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: YGDIGLFEEPSNTQFQSATLLCE*IRPVCV Trigger: CACACAGACTGGCCTTATCCACTCGCAGAGTAATGT...GGCTGACTGAAACTGGGTATTGCTTGGCTCTTCAAACAAACCAATGTCTCCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CCA 90 bp | AACCAATTAACGATCTATTCACTGTGGGGAGGAGAATCTCCTTTCTTTACTTTCTGTGCTGCTGGTTCATaGCTCCGTGATGACCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NQLTIYSLWGGESPFFTFCAAGS*LRDDLP Trigger: TGGCAGGTCATCACGGAGCCATGAACCAGCAGCACA...GAAAGTAAAGAAAGGAGATTCTCCTCCCCACAGTGAATAGATCGTTAATTGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR CAA 72 bp | AGGGTACTGGCAGGGAGACAAACATGTAGTTCTTGCTaGGGTTGGATAAAAGCAGTAAGTTACCCAGCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: RVLAGRQTCSSC*GWIKAVSYPAR Trigger: TCTAGCTGGGTAACTTACTGCTTTTATCCAACCCAAGCAAGAACTACATGTTTGTCTCCCTGCCAGTACCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR CAA 72 bp | TCTCCTGGACAGAGCGCCCCATCTGTGTATGTATGTTaGTTAGTCCTTACCCCAAGTCTCCAGTTAATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SPGQSAPSVYVC*LVLTPSLQLIS Trigger: TGAAATTAACTGGAGACTTGGGGTAAGGACTAACAAACATACATACACAGATGGGGCGCTCTGTCCAGGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR TCA 90 bp | GTTAGGAGCTACAGAGGGTACTGGCAGGGAGACAAACATGTAGTTCTTGCTTGGCTCATTAAACCTTGTTaGCTAAGTGACTGCTCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: VRSYRGYWQGDKHVVLAWLIKPC*LSDCSK Trigger: TTTTGAGCAGTCACTTAGTCAACAAGGTTTAATGAG...CCAAGCAAGAACTACATGTTTGTCTCCCTGCCAGTACCCTCTGTAGCTCCTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR GCA 90 bp | AACCAATTAACGATCTATTCACTGTGGGGAGGAGAATCTCCTTTCTTTACTTTCAGATTTCTGGATGGCTaGTCTCATGGTGAGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: NQLTIYSLWGGESPFFTFRFLDG*SHGELG Trigger: CCCCAGCTCACCATGAGAGCAGCCATCCAGAAATCT...GAAAGTAAAGAAAGGAGATTCTCCTCCCCACAGTGAATAGATCGTTAATTGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR GCA 90 bp | AAGTGTCTACTTCCTCTAAAAGTAAAACTAAGCATGGCAGCACATGCTTGCAATAGATTTCTGGATGGCTaGTCTCATGGTGAGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KCLLPLKVKLSMAAHACNRFLDG*SHGELG Trigger: CCCCAGCTCACCATGAGAGCAGCCATCCAGAAATCT...ATTGCAAGCATGTGCTGCCATGCTTAGTTTTACTTTTAGAGGAAGTAGACACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000138845.9 ENSMUST00000162267.8 |
||
| CDS-3UTR GCA 90 bp | TATGGAGACATTGGTTTGTTTGAAGAGCCAAGCAATACCCAGTTTCAGTCAGCCGAGGGAGGGAGACTTTaGCTGGAATCTATGTACAAA | + |
|
Preference number: 4 (lower is better) Translates to: YGDIGLFEEPSNTQFQSAEGGRL*LESMYK Trigger: TTTGTACATAGATTCCAGGCAAAGTCTCCCTCCCTC...GGCTGACTGAAACTGGGTATTGCTTGGCTCTTCAAACAAACCAATGTCTCCATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CCA 90 bp | ATTTACATTTCAAACACTGCCACAAATGCCAGTCGGACTCTTCTCCTGGACAGATGTCTTCCTTCGGATTaGTGTCTATTGCCCAGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: IYISNTATNASRTLLLDRCLPSD*CLLPSK Trigger: CTTACTGGGCAATAGACACCAATCCGAAGGAAGACA...TCTGTCCAGGAGAAGAGTCCGACTGGCATTTGTGGCAGTGTTTGAAATGTAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR TCA 90 bp | TACTCTATTCCATTTGAAATTATCCCAAGATCGATCCCCTCCCACTTCAAAGGAGTGTTGATAGGAACATaGAGTGTGGGACTGTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: YSIPFEIIPRSIPSHFKGVLIGT*SVGLLG Trigger: TCCCAACAGTCCCACACTTCATGTTCCTATCAACAC...TCCTTTGAAGTGGGAGGGGATCGATCTTGGGATAATTTCAAATGGAATAGAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR GCA 90 bp | AGATCGATCCCCTCCCACTTCAAAGGACGTCTGAGACACATATTAAATATTTACTTCTTGAGATCCGCCTaGCTCATACTCTCCATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RSIPSHFKGRLRHILNIYFLRSA*LILSIR Trigger: TCTGATGGAGAGTATGAGGCAGGCGGATCTCAAGAA...GTAAATATTTAATATGTGTCTCAGACGTCCTTTGAAGTGGGAGGGGATCGATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CCA 90 bp | AAGTGTCTACTTCCTCTAAAAGTAAAACTAAGCATGGCAGCACATGCTTGCAATGCTCTCATGGTGAGCTaGGGTAACCAGTCCATAGAT | + |
|
Preference number: 4 (lower is better) Translates to: KCLLPLKVKLSMAAHACNALMVS*GNQSID Trigger: ATCTATGGACTGGTTACCCCAGCTCACCATGAGAGC...ATTGCAAGCATGTGCTGCCATGCTTAGTTTTACTTTTAGAGGAAGTAGACACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000138845.9 ENSMUST00000162267.8 |
||
| CDS-3UTR CCA 90 bp | TGGTGTCTAGAAAACAGAGACTTGAGCAAACTACTGAGGACCTCATTTTCCCAATGTTGGACTTCTTCCTaGTCCAGTGTTGTATTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: WCLENRDLSKLLRTSFSQCWTSS*SSVVFG Trigger: CCCAAATACAACACTGGACCAGGAAGAAGTCCAACA...TTGGGAAAATGAGGTCCTCAGTAGTTTGCTCAAGTCTCTGTTTTCTAGACACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CCA 90 bp | CTACTTCCTCTAAAAGTAAAACTAAGCATGGCAGCACATGCTTGCAATTTCAGCCCATCTTTGTGCTGTTaGACTTCTTCCTGGTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LLPLKVKLSMAAHACNFSPSLCC*TSSWSS Trigger: ACTGGACCAGGAAGAAGTCCAACAGCACAAAGATGG...GCTGAAATTGCAAGCATGTGCTGCCATGCTTAGTTTTACTTTTAGAGGAAGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000138845.9 ENSMUST00000162267.8 |
||
| CDS-3UTR CCA 90 bp | TCCCACTTCAAAGGACGTCTGAGACACATATTAAATATTTACAGGAACACACAGCTGAGAGACTGGTTCTaGATGGTTAGTGACCGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SHFKGRLRHILNIYRNTQLRDWF*MVSDRC Trigger: ACACCGGTCACTAACCATCCAGAACCAGTCTCTCAG...CTGTGTGTTCCTGTAAATATTTAATATGTGTCTCAGACGTCCTTTGAAGTGGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CCA 90 bp | TGGTGTCTAGAAAACAGAGACTTGAGCAAACTACTGAGGACCTCATTTTCCCAACTCTCCATCAGACCTTaGAACTGTGAAAGGTCTACA | + |
|
Preference number: 4 (lower is better) Translates to: WCLENRDLSKLLRTSFSQLSIRP*NCERST Trigger: TGTAGACCTTTCACAGTTCCAAGGTCTGATGGAGAG...TTGGGAAAATGAGGTCCTCAGTAGTTTGCTCAAGTCTCTGTTTTCTAGACACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR TCA 90 bp | AACCAATTAACGATCTATTCACTGTGGGGAGGAGAATCTCCTTTCTTTACTTTCGTGTTGATAGGAACATaGAGTGTGGGACTGTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: NQLTIYSLWGGESPFFTFVLIGT*SVGLLG Trigger: TCCCAACAGTCCCACACTTCATGTTCCTATCAACAC...GAAAGTAAAGAAAGGAGATTCTCCTCCCCACAGTGAATAGATCGTTAATTGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR GCA 90 bp | TCCCACTTCAAAGGACGTCTGAGACACATATTAAATATTTACAGGAACACACAGTTCTTGAGATCCGCCTaGCTCATACTCTCCATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SHFKGRLRHILNIYRNTQFLRSA*LILSIR Trigger: TCTGATGGAGAGTATGAGGCAGGCGGATCTCAAGAA...CTGTGTGTTCCTGTAAATATTTAATATGTGTCTCAGACGTCCTTTGAAGTGGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CCA 90 bp | TCCCACTTCAAAGGACGTCTGAGACACATATTAAATATTTACAGGAACACACAGCCATCTTTGTGCTGTTaGACTTCTTCCTGGTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SHFKGRLRHILNIYRNTQPSLCC*TSSWSS Trigger: ACTGGACCAGGAAGAAGTCCAACAGCACAAAGATGG...CTGTGTGTTCCTGTAAATATTTAATATGTGTCTCAGACGTCCTTTGAAGTGGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CCA 90 bp | AAGTGTCTACTTCCTCTAAAAGTAAAACTAAGCATGGCAGCACATGCTTGCAATCCATCTTTGTGCTGTTaGACTTCTTCCTGGTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KCLLPLKVKLSMAAHACNPSLCC*TSSWSS Trigger: ACTGGACCAGGAAGAAGTCCAACAGCACAAAGATGG...ATTGCAAGCATGTGCTGCCATGCTTAGTTTTACTTTTAGAGGAAGTAGACACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000138845.9 ENSMUST00000162267.8 |
||
| CDS-3UTR CCA 90 bp | TACTCTATTCCATTTGAAATTATCCCAAGATCGATCCCCTCCCACTTCAAAGGATGTCTTCCTTCGGATTaGTGTCTATTGCCCAGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: YSIPFEIIPRSIPSHFKGCLPSD*CLLPSK Trigger: CTTACTGGGCAATAGACACCAATCCGAAGGAAGACA...TCCTTTGAAGTGGGAGGGGATCGATCTTGGGATAATTTCAAATGGAATAGAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CCA 90 bp | AGATCGATCCCCTCCCACTTCAAAGGACGTCTGAGACACATATTAAATATTTACACAGACGCCAAACTCTaGTCTGAGAGACTGTTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: RSIPSHFKGRLRHILNIYTDAKL*SERLLL Trigger: TAACAACAGTCTCTCAGACCAGAGTTTGGCGTCTGT...GTAAATATTTAATATGTGTCTCAGACGTCCTTTGAAGTGGGAGGGGATCGATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CCA 90 bp | TCTGGCAGCGACAATCCTAATGACACTTGGAATATTTCTTTACAGCACTATACGCTCTCCATCAGACCTTaGAACTGTGAAAGGTCTACA | + |
|
Preference number: 4 (lower is better) Translates to: SGSDNPNDTWNISLQHYTLSIRP*NCERST Trigger: TGTAGACCTTTCACAGTTCCAAGGTCTGATGGAGAG...CGTATAGTGCTGTAAAGAAATATTCCAAGTGTCATTAGGATTGTCGCTGCCAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CCA 90 bp | TCCCACTTCAAAGGACGTCTGAGACACATATTAAATATTTACAGGAACACACAGAGTGTTGAGCGCCTGTaGAATATGAGGATAACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SHFKGRLRHILNIYRNTQSVERL*NMRITR Trigger: CCTGGTTATCCTCATATTCCACAGGCGCTCAACACT...CTGTGTGTTCCTGTAAATATTTAATATGTGTCTCAGACGTCCTTTGAAGTGGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR CAA 72 bp | TTCGAAAGGAATTTAGATAGCACTGGTAACATAGCTTaGTTTTCTCAACCGGCCTCTAATCCGTCCTTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: FERNLDSTGNIA*FSQPASNPSFH Trigger: GTGAAAGGACGGATTAGAGGCCGGTTGAGAAAACAAAGCTATGTTACCAGTGCTATCTAAATTCCTTTCGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR TCA 90 bp | TGGTGTCTAGAAAACAGAGACTTGAGCAAACTACTGAGGACCTCATTTTCCCAAATAAAGACTCCGAAATaGGGCACTGAGATCTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: WCLENRDLSKLLRTSFSQIKTPK*GTEIFK Trigger: TTTGAAGATCTCAGTGCCTCATTTCGGAGTCTTTAT...TTGGGAAAATGAGGTCCTCAGTAGTTTGCTCAAGTCTCTGTTTTCTAGACACCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR TCA 90 bp | GCTTCCCAGGGATTCATTCAAGACAACACTCCATTAACACATACACAGATATTCGTCTGTGTGAAGAACTaGTTAAGAGAGGAACAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: ASQGFIQDNTPLTHTQIFVCVKN*LREEQR Trigger: TCTCTGTTCCTCTCTTAATCAGTTCTTCACACAGAC...GAATATCTGTGTATGTGTTAATGGAGTGTTGTCTTGAATGAATCCCTGGGAAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR GCA 90 bp | TGGTGTCTAGAAAACAGAGACTTGAGCAAACTACTGAGGACCTCATTTTCCCAAAATTCTTCCAACCACTaGCAGCTTCTCTATAATACG | + |
|
Preference number: 4 (lower is better) Translates to: WCLENRDLSKLLRTSFSQNSSNH*QLLYNT Trigger: CGTATTATAGAGAAGCTGGCAGTGGTTGGAAGAATT...TTGGGAAAATGAGGTCCTCAGTAGTTTGCTCAAGTCTCTGTTTTCTAGACACCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR GCA 90 bp | TTAAAATGGATTTCCCTCTCTGTAAAGAACCAATTAACGATCTATTCACTGTGGGGACAGCGAGACCTGTaGAACCGAATTACTACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LKWISLSVKNQLTIYSLWGQRDL*NRITTC Trigger: ACAGGTAGTAATTCGGTTGCACAGGTCTCGCTGTCC...CCACAGTGAATAGATCGTTAATTGGTTCTTTACAGAGAGGGAAATCCATTTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR GCA 90 bp | TTAAAATGGATTTCCCTCTCTGTAAAGAACCAATTAACGATCTATTCACTGTGGTGCTGGGGTAAACCATaGGGTCTATGGGGTGTATGT | + |
|
Preference number: 4 (lower is better) Translates to: LKWISLSVKNQLTIYSLWCWGKP*GLWGVC Trigger: ACATACACCCCATAGACCGCATGGTTTACCCCAGCA...CCACAGTGAATAGATCGTTAATTGGTTCTTTACAGAGAGGGAAATCCATTTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CCA 90 bp | AAGTGTCTACTTCCTCTAAAAGTAAAACTAAGCATGGCAGCACATGCTTGCAATTGTTGGACTTCTTCCTaGTCCAGTGTTGTATTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KCLLPLKVKLSMAAHACNCWTSS*SSVVFG Trigger: CCCAAATACAACACTGGACCAGGAAGAAGTCCAACA...ATTGCAAGCATGTGCTGCCATGCTTAGTTTTACTTTTAGAGGAAGTAGACACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000138845.9 ENSMUST00000162267.8 |
||
| CDS-3UTR CCA 90 bp | TCCCACTTCAAAGGACGTCTGAGACACATATTAAATATTTACAGGAACACACAGACAGACGCCAAACTCTaGTCTGAGAGACTGTTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: SHFKGRLRHILNIYRNTQTDAKL*SERLLL Trigger: TAACAACAGTCTCTCAGACCAGAGTTTGGCGTCTGT...CTGTGTGTTCCTGTAAATATTTAATATGTGTCTCAGACGTCCTTTGAAGTGGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CCA 90 bp | TGTGACATGACACAAAACAAAGCAACTGATCAAAGCTCTGAGGTGCTTCATGTTTTGTTTTTCTCGTTCTaGAAGGTTGTACTGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CDMTQNKATDQSSEVLHVLFFSF*KVVLWL Trigger: CAGCCACAGTACAACCTTCCAGAACGAGAAAAACAA...AACATGAAGCACCTCAGAGCTTTGATCAGTTGCTTTGTTTTGTGTCATGTCACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR TCA 90 bp | TACTCTATTCCATTTGAAATTATCCCAAGATCGATCCCCTCCCACTTCAAAGGAATAAAGACTCCGAAATaGGGCACTGAGATCTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: YSIPFEIIPRSIPSHFKGIKTPK*GTEIFK Trigger: TTTGAAGATCTCAGTGCCTCATTTCGGAGTCTTTAT...TCCTTTGAAGTGGGAGGGGATCGATCTTGGGATAATTTCAAATGGAATAGAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR TCA 90 bp | TGTGACATGACACAAAACAAAGCAACTGATCAAAGCTCTGAGGTGCTTCATGTTTGCATACCAATCACTTaGAACACCAGAATTACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CDMTQNKATDQSSEVLHVCIPIT*NTRITG Trigger: TCCTGTAATTCTGGTGTTTCAAGTGATTGGTATGCA...AACATGAAGCACCTCAGAGCTTTGATCAGTTGCTTTGTTTTGTGTCATGTCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR GCA 90 bp | TACTCTATTCCATTTGAAATTATCCCAAGATCGATCCCCTCCCACTTCAAAGGAAAGAATCTGAATCTATaGTATATGGAGTTGAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: YSIPFEIIPRSIPSHFKGKNLNL*YMELRP Trigger: GGGCCTCAACTCCATATAGCATAGATTCAGATTCTT...TCCTTTGAAGTGGGAGGGGATCGATCTTGGGATAATTTCAAATGGAATAGAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044564.15 |
||
| CDS-3UTR CCA 90 bp | TTAAAATGGATTTCCCTCTCTGTAAAGAACCAATTAACGATCTATTCACTGTGGACATTACTCTGCGAGTaGATAAGGCCAGTCTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LKWISLSVKNQLTIYSLWTLLCE*IRPVCV Trigger: CACACAGACTGGCCTTATCCACTCGCAGAGTAATGT...CCACAGTGAATAGATCGTTAATTGGTTCTTTACAGAGAGGGAAATCCATTTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CCA 90 bp | TTAAAATGGATTTCCCTCTCTGTAAAGAACCAATTAACGATCTATTCACTGTGGAGTGTTGAGCGCCTGTaGAATATGAGGATAACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LKWISLSVKNQLTIYSLWSVERL*NMRITR Trigger: CCTGGTTATCCTCATATTCCACAGGCGCTCAACACT...CCACAGTGAATAGATCGTTAATTGGTTCTTTACAGAGAGGGAAATCCATTTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR TCA 90 bp | TCTGGCAGCGACAATCCTAATGACACTTGGAATATTTCTTTACAGCACTATACGTCCGAAATGAGGCACTaGGATCTTCAAAATTGTATT | + |
|
Preference number: 4 (lower is better) Translates to: SGSDNPNDTWNISLQHYTSEMRH*DLQNCI Trigger: AATACAATTTTGAAGATCTCAGTGCCTCATTTCGGA...CGTATAGTGCTGTAAAGAAATATTCCAAGTGTCATTAGGATTGTCGCTGCCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| 3UTR CAA 72 bp | AATAATAAATACATAAGTGACTATGGAGACATTGGTTaGTTTGAAGAGCCAAGCAATACCCAGTTTCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: NNKYISDYGDIG*FEEPSNTQFQS Trigger: TGACTGAAACTGGGTATTGCTTGGCTCTTCAAACAAACCAATGTCTCCATAGTCACTTATGTATTTATTATT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS CCA 90 bp | GGCGGCTGTAGCTGGCTGTGTTGCTGTGGGTGTGGTGCTGGGTGCTaGGGACGCTGTGGGTGCTGGGGTAAACCATGCGGTCTATGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: GGCSWLCCCGCGAGC*GRCGCWGKPCGLWG Trigger: ACCCCATAGACCGCATGGTTTACCCCAGCACCCACAGCGTCCCCAGCACCCAGCACCACACCCACAGCAACACAGCCAGCTACAGCCGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS GCA 90 bp | TGGAGAGGGCTGGGGGTGCATCTGGGGGTGGGACAGCGAGACCTGTaGAACCGAATTACTACCTGTGGCACTGAGGCCACTGTGATTGTT | + |
|
Preference number: 5 (lower is better) Translates to: WRGLGVHLGVGQRDL*NRITTCGTEATVIV Trigger: AACAATCACAGTGGCCTCAGTGCCACAGGTAGTAATTCGGTTGCACAGGTCTCGCTGTCCCACCCCCAGATGCACCCCCAGCCCTCTCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CAA 90 bp | GTTGGGGACACACAGACCCAACAGCAGGTCACGCAGTCAGTCACTGCACTCAAGTCCTGCCCCGATGTGTaGGGAAGGCTTTGCTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: VGDTQTQQQVTQSVTALKSCPDV*GRLCWV Trigger: CACCCAGCAAAGCCTTCCCAACACATCGGGGCAGGA...CTTGAGTGCAGTGACTGACTGCGTGACCTGCTGTTGGGTCTGTGTGTCCCCAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS TCA 90 bp | GGTGGGACAGCGAGACCTGTGCAACCGAATTACTACCTGTGGCACTaGGGCCACTGTGATTGTTGGGCAGGCTGCTTTGGTTGCTGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: GGTARPVQPNYYLWH*GHCDCWAGCFGCCV Trigger: CACACAGCAACCAAAGCAGCCTGCCCAACAATCACAGTGGCCTCAGTGCCACAGGTAGTAATTCGGTTGCACAGGTCTCGCTGTCCCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
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| CDS TCA 90 bp | CCTGCCCCGATGTGTTGGGAAGGCTTTGCTGGGTGCATGGCACCGTaGCAGACATTCTGCGGAACATTACTCTGCGAGTGGATAAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PAPMCWEGFAGCMAP*QTFCGTLLCEWIRP Trigger: TGGCCTTATCCACTCGCAGAGTAATGTTCCGCAGAATGTCTGTCACGGTGCCATGCACCCAGCAAAGCCTTCCCAACACATCGGGGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS GCA 90 bp | CTTTGGCCGAGTAGGCAGCGTGTCTTCCTTCGGATTGGTGTCTATTaGCCAGTAAGAACCCTTTCCGGGATCATCCTTGGACCGAGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LWPSRQRVFLRIGVY*PVRTLSGIILGPRH Trigger: GTGCCTCGGTCCAAGGATGATCCCGGAAAGGGTTCTTACTGGGCAATAGACACCAATCCGAAGGAAGACACGCTGCCTACTCGGCCAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CAA 90 bp | CAGGGAAACAGGGAATCACAGAAGAGTGGTGAGTGGCCTCAAGTGCCATTCTTGATTACAGGATACCTGTaGCGGGGGTGGCGGTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QGNRESQKSGEWPQVPFLITGYL*RGWRWL Trigger: CAGCCACCGCCACCCCCGCAACAGGTATCCTGTAAT...CAAGAATGGCACTTGAGGCCACTCACCACTCTTCTGTGATTCCCTGTTTCCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS CCA 90 bp | ACAAATTTCCTGCCCCGATGTGTTGGGAAGGCTTTGCTGGGTGCATaGCACCGTGACAGACATTCTGCGGAACATTACTCTGCGAGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: TNFLPRCVGKALLGA*HRDRHSAEHYSASG Trigger: TCCACTCGCAGAGTAATGTTCCGCAGAATGTCTGTCACGGTGCCATGCACCCAGCAAAGCCTTCCCAACACATCGGGGCAGGAAATTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
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| CDS CCA 90 bp | GAGGATAACCAGGGGGTGGCATCACTGAGGGAGGGAGACTTTGCCTaGAATCTATGTACAAATTTCCTGCCCCGATGTGTTGGGAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: EDNQGVASLREGDFA*NLCTNFLPRCVGKA Trigger: AGCCTTCCCAACACATCGGGGCAGGAAATTTGTACATAGATTCCAGGCAAAGTCTCCCTCCCTCAGTGATGCCACCCCCTGGTTATCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CAA 90 bp | TGTTGGGGACACACAGACCCAACAGCAGGTCACGCAGTCAGTCACTGCACTCAATCCATCTTTGTGCTGTaGGACTTCTTCCTGGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: CWGHTDPTAGHAVSHCTQSIFVL*DFFLVQ Trigger: CTGGACCAGGAAGAAGTCCAACAGCACAAAGATGGA...TTGAGTGCAGTGACTGACTGCGTGACCTGCTGTTGGGTCTGTGTGTCCCCAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CAA 90 bp | TGTTGGGGACACACAGACCCAACAGCAGGTCACGCAGTCAGTCACTGCACTCAAATGGTTCGGATGGTGTaGTATGTGCTGATGTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: CWGHTDPTAGHAVSHCTQMVRMV*YVLMWR Trigger: CCTCCACATCAGCACATACAACACCATCCGAACCAT...TTGAGTGCAGTGACTGACTGCGTGACCTGCTGTTGGGTCTGTGTGTCCCCAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
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| CDS-3UTR CAA 90 bp | AAGAGGGCACTGGACCTCCTAAGAGTGAGTGTGAGCTGCCTAATGCAGGTACTATTTCCGGGATCATCCTaGGACCGAGGCACTTTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: KRALDLLRVSVSCLMQVLFPGSS*DRGTLR Trigger: CCTTAAAGTGCCTCGGTCCAAGGATGATCCCGGAAA...TAGTACCTGCATTAGGCAGCTCACACTCACTCTTAGGAGGTCCAGTGCCCTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138845.9 ENSMUST00000162267.8 |
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| CDS-3UTR CAA 90 bp | GCTTGCAATTTCAGCACTAGGGAGGTAGAGGCCTGCTGTAAGTTCAAGGCTCTCTTTCCGGGATCATCCTaGGACCGAGGCACTTTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: ACNFSTREVEACCKFKALFPGSS*DRGTLR Trigger: CCTTAAAGTGCCTCGGTCCAAGGATGATCCCGGAAA...GAGAGCCTTGAACTTACAGCAGGCCTCTACCTCCCTAGTGCTGAAATTGCAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138845.9 ENSMUST00000162267.8 |
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| CDS-3UTR CAA 90 bp | AAAGCAACTGATCAAAGCTCTGAGGTGCTTCATGTTGGGGACACACAGACCCAACCCGTTCTACGGATCTaGCCCTCTTCTTTGGCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: KATDQSSEVLHVGDTQTQPVLRI*PSSLAE Trigger: CTCGGCCAAAGAAGAGGGCAAGATCCGTAGAACGGG...TTGGGTCTGTGTGTCCCCAACATGAAGCACCTCAGAGCTTTGATCAGTTGCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
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| CDS CCA 90 bp | AGCGTTGTACAATGTTACCCGTTCTACGGATCTTGCCCTCTTCTTTaGCCGAGTAGGCAGCGTGTCTTCCTTCGGATTGGTGTCTATTGC | + |
|
Preference number: 5 (lower is better) Translates to: SVVQCYPFYGSCPLL*PSRQRVFLRIGVYC Trigger: GCAATAGACACCAATCCGAAGGAAGACACGCTGCCTACTCGGCCAAAGAAGAGGGCAAGATCCGTAGAACGGGTAACATTGTACAACGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106310.9 |
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| CDS CCA 90 bp | GAGAGACTGTTGTTAAGGCTGCTTCGAGGGCTATCACTACCATCCTaGTCAGCGTTGTACAATGTTACCCGTTCTACGGATCTTGCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: ERLLLRLLRGLSLPS*SALYNVTRSTDLAL Trigger: GAGGGCAAGATCCGTAGAACGGGTAACATTGTACAACGCTGACCAGGATGGTAGTGATAGCCCTCGAAGCAGCCTTAACAACAGTCTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106310.9 |
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| CDS-3UTR CAA 90 bp | ATCAAAGCTCTGAGGTGCTTCATGTTGGGGACACACAGACCCAACAGCAGGTCAATGGTTCGGATGGTGTaGTATGTGCTGATGTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: IKALRCFMLGTHRPNSRSMVRMV*YVLMWR Trigger: CCTCCACATCAGCACATACAACACCATCCGAACCAT...TGACCTGCTGTTGGGTCTGTGTGTCCCCAACATGAAGCACCTCAGAGCTTTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CAA 90 bp | ATTTACATTTCAAACACTGCCACAAATGCCAGTCGGACTCTTCTCCTGGACAGATCCTGCCCCGATGTGTaGGGAAGGCTTTGCTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: IYISNTATNASRTLLLDRSCPDV*GRLCWV Trigger: CACCCAGCAAAGCCTTCCCAACACATCGGGGCAGGA...TCTGTCCAGGAGAAGAGTCCGACTGGCATTTGTGGCAGTGTTTGAAATGTAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
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| CDS GCA 90 bp | GGAATCTATGTACAAATTTCCTGCCCCGATGTGTTGGGAAGGCTTTaGTGGGTGCATGGCACCGTGACAGACATTCTGCGGAACATTACT | + |
|
Preference number: 5 (lower is better) Translates to: GIYVQISCPDVLGRL*WVHGTVTDILRNIT Trigger: AGTAATGTTCCGCAGAATGTCTGTCACGGTGCCATGCACCCAGCAAAGCCTTCCCAACACATCGGGGCAGGAAATTTGTACATAGATTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS CCA 90 bp | ATCTATGTACAAATTTCCTGCCCCGATGTGTTGGGAAGGCTTTGCTaGGTGCATGGCACCGTGACAGACATTCTGCGGAACATTACTCTG | + |
|
Preference number: 5 (lower is better) Translates to: IYVQISCPDVLGRLC*VHGTVTDILRNITL Trigger: CAGAGTAATGTTCCGCAGAATGTCTGTCACGGTGCCATGCACCCAGCAAAGCCTTCCCAACACATCGGGGCAGGAAATTTGTACATAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CAA 90 bp | TATGGAGACATTGGTTTGTTTGAAGAGCCAAGCAATACCCAGTTTCAGTCAGCCTGTGTTGGGAAGGCTTaGCTGGGTGCATGGCACCGT | + |
|
Preference number: 5 (lower is better) Translates to: YGDIGLFEEPSNTQFQSACVGKA*LGAWHR Trigger: ACGGTGCCATGCACCCAGCAAAGCCTTCCCAACACA...GGCTGACTGAAACTGGGTATTGCTTGGCTCTTCAAACAAACCAATGTCTCCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS TCA 90 bp | AGGAACAGAGATCAGCGAACTGAACCTGATCTAATGACCAGTTCTTaGGATCCGCCTGCCTCATACTCTCCATCAGACCTTGGAACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RNRDQRTEPDLMTSS*DPPASYSPSDLGTV Trigger: CACAGTTCCAAGGTCTGATGGAGAGTATGAGGCAGGCGGATCTCAAGAACTGGTCATTAGATCAGGTTCAGTTCGCTGATCTCTGTTCCT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CAA 90 bp | GTTAGGAGCTACAGAGGGTACTGGCAGGGAGACAAACATGTAGTTCTTGCTTGGGGAGGTTTTCCATCTTaGTGCTGTTGGACTTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: VRSYRGYWQGDKHVVLAWGGFPS*CCWTSS Trigger: GGAAGAAGTCCAACAGCACAAAGATGGAAAACCTCC...CCAAGCAAGAACTACATGTTTGTCTCCCTGCCAGTACCCTCTGTAGCTCCTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CAA 90 bp | AAACTAAGCATGGCAGCACATGCTTGCAATTTCAGCACTAGGGAGGTAGAGGCCGGAGGTTTTCCATCTTaGTGCTGTTGGACTTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: KLSMAAHACNFSTREVEAGGFPS*CCWTSS Trigger: GGAAGAAGTCCAACAGCACAAAGATGGAAAACCTCC...GGCCTCTACCTCCCTAGTGCTGAAATTGCAAGCATGTGCTGCCATGCTTAGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138845.9 ENSMUST00000162267.8 |
||
| CDS-3UTR CAA 90 bp | TGGTGTCTAGAAAACAGAGACTTGAGCAAACTACTGAGGACCTCATTTTCCCAACCCGTTCTACGGATCTaGCCCTCTTCTTTGGCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: WCLENRDLSKLLRTSFSQPVLRI*PSSLAE Trigger: CTCGGCCAAAGAAGAGGGCAAGATCCGTAGAACGGG...TTGGGAAAATGAGGTCCTCAGTAGTTTGCTCAAGTCTCTGTTTTCTAGACACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CAA 90 bp | TATCCCAAGATCGATCCCCTCCCACTTCAAAGGACGTCTGAGACACATATTAAATCTCGTTCTGGAAGGTaGTACTGTGGCTGCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: YPKIDPLPLQRTSETHIKSRSGR*YCGCCC Trigger: GCAGCAGCAGCCACAGTACAACCTTCCAGAACGAGA...TTTAATATGTGTCTCAGACGTCCTTTGAAGTGGGAGGGGATCGATCTTGGGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS CCA 90 bp | TTTTGTGTAGCATCAGATTTCTGGATGGCTGCTCTCATGGTGAGCTaGGGTAACCAGTCCATAGATGTTAGGCTGCTCTCCAGTTCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: FCVASDFWMAALMVS*GNQSIDVRLLSSSD Trigger: ATCTGAACTGGAGAGCAGCCTAACATCTATGGACTGGTTACCCCAGCTCACCATGAGAGCAGCCATCCAGAAATCTGATGCTACACAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 ENSMUST00000137560.8 ENSMUST00000138845.9 ENSMUST00000160219.2 ENSMUST00000162267.8 ENSMUST00000176012.8 |
||
| CDS-3UTR CAA 90 bp | AAGAGGGCACTGGACCTCCTAAGAGTGAGTGTGAGCTGCCTAATGCAGGTACTACGTTCCATGTGCATTTaGTGTAGCATCAGATTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: KRALDLLRVSVSCLMQVLRSMCI*CSIRFL Trigger: CAGAAATCTGATGCTACACAAAATGCACATGGAACG...TAGTACCTGCATTAGGCAGCTCACACTCACTCTTAGGAGGTCCAGTGCCCTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138845.9 ENSMUST00000162267.8 |
||
| CDS-3UTR CAA 90 bp | GCTTGCAATTTCAGCACTAGGGAGGTAGAGGCCTGCTGTAAGTTCAAGGCTCTCCGTTCCATGTGCATTTaGTGTAGCATCAGATTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: ACNFSTREVEACCKFKALRSMCI*CSIRFL Trigger: CAGAAATCTGATGCTACACAAAATGCACATGGAACG...GAGAGCCTTGAACTTACAGCAGGCCTCTACCTCCCTAGTGCTGAAATTGCAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138845.9 ENSMUST00000162267.8 |
||
| CDS-3UTR CAA 90 bp | AAAGCAACTGATCAAAGCTCTGAGGTGCTTCATGTTGGGGACACACAGACCCAATCGGATTGGTGTCTATaGCCCAGTAAGAACCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: KATDQSSEVLHVGDTQTQSDWCL*PSKNPF Trigger: GAAAGGGTTCTTACTGGGCAATAGACACCAATCCGA...TTGGGTCTGTGTGTCCCCAACATGAAGCACCTCAGAGCTTTGATCAGTTGCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CAA 90 bp | ATCAAAGCTCTGAGGTGCTTCATGTTGGGGACACACAGACCCAACAGCAGGTCACCATCCTGGTCAGCGTaGTACAATGTTACTTTGTTA | + |
|
Preference number: 5 (lower is better) Translates to: IKALRCFMLGTHRPNSRSPSWSA*YNVTLL Trigger: TAACAAAGTAACATTGTACAACGCTGACCAGGATGG...TGACCTGCTGTTGGGTCTGTGTGTCCCCAACATGAAGCACCTCAGAGCTTTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044564.15 |
||
| CDS-3UTR CAA 90 bp | TCTGGCAGCGACAATCCTAATGACACTTGGAATATTTCTTTACAGCACTATACGTGTGTTGGGAAGGCTTaGCTGGGTGCATGGCACCGT | + |
|
Preference number: 5 (lower is better) Translates to: SGSDNPNDTWNISLQHYTCVGKA*LGAWHR Trigger: ACGGTGCCATGCACCCAGCAAAGCCTTCCCAACACA...CGTATAGTGCTGTAAAGAAATATTCCAAGTGTCATTAGGATTGTCGCTGCCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CAA 90 bp | TATCCCAAGATCGATCCCCTCCCACTTCAAAGGACGTCTGAGACACATATTAAACTATGCTATATGGAGTaGAGGCCCGTTCTACGGATC | + |
|
Preference number: 5 (lower is better) Translates to: YPKIDPLPLQRTSETHIKLCYME*RPVLRI Trigger: GATCCGTAGAACGGGCCTCAACTCCATATAGCATAG...TTTAATATGTGTCTCAGACGTCCTTTGAAGTGGGAGGGGATCGATCTTGGGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044564.15 |
||
| CDS-3UTR CAA 90 bp | TGTGACATGACACAAAACAAAGCAACTGATCAAAGCTCTGAGGTGCTTCATGTTTCTCGTTCTGGAAGGTaGTACTGTGGCTGCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: CDMTQNKATDQSSEVLHVSRSGR*YCGCCC Trigger: GCAGCAGCAGCCACAGTACAACCTTCCAGAACGAGA...AACATGAAGCACCTCAGAGCTTTGATCAGTTGCTTTGTTTTGTGTCATGTCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CAA 90 bp | CAGGGAAACAGGGAATCACAGAAGAGTGGTGAGTGGCCTCAAGTGCCATTCTTGTCAGCATATCGAGTGTaGCATACCAATCACTTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: QGNRESQKSGEWPQVPFLSAYRV*HTNHLK Trigger: TTTCAAGTGATTGGTATGCAACACTCGATATGCTGA...CAAGAATGGCACTTGAGGCCACTCACCACTCTTCTGTGATTCCCTGTTTCCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS TCA 90 bp | TACACTTCCAACACTGTTCAAATTAACAGACGCCAAACTCTGGTCTaGGAGACTGTTGTTAAGGCTGCTTCGAGGGCTATCACTACCATC | + |
|
Preference number: 5 (lower is better) Translates to: YTSNTVQINRRQTLV*ETVVKAASRAITTI Trigger: GATGGTAGTGATAGCCCTCGAAGCAGCCTTAACAACAGTCTCTCAGACCAGAGTTTGGCGTCTGTTAATTTGAACAGTGTTGGAAGTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS CCA 90 bp | TTAGAAATTCCCGTTCCATGTGCATTTTGTGTAGCATCAGATTTCTaGATGGCTGCTCTCATGGTGAGCTGGGGTAACCAGTCCATAGAT | + |
|
Preference number: 5 (lower is better) Translates to: LEIPVPCAFCVASDF*MAALMVSWGNQSID Trigger: ATCTATGGACTGGTTACCCCAGCTCACCATGAGAGCAGCCATCCAGAAATCTGATGCTACACAAAATGCACATGGAACGGGAATTTCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 ENSMUST00000137560.8 ENSMUST00000138845.9 ENSMUST00000160219.2 ENSMUST00000162267.8 ENSMUST00000176012.8 |
||
| CDS-3UTR CAA 90 bp | TGTTGGCTATTGGTTGAGAATCCTCTGTACCTGAGCTTCTTTCTCTCATGCCAAGGAGGTTTTCCATCTTaGTGCTGTTGGACTTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: CWLLVENPLYLSFFLSCQGGFPS*CCWTSS Trigger: GGAAGAAGTCCAACAGCACAAAGATGGAAAACCTCC...TTGGCATGAGAGAAAGAAGCTCAGGTACAGAGGATTCTCAACCAATAGCCAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CAA 90 bp | TGTGACATGACACAAAACAAAGCAACTGATCAAAGCTCTGAGGTGCTTCATGTTTTTCCGGGATCATCCTaGGACCGAGGCACTTTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: CDMTQNKATDQSSEVLHVFPGSS*DRGTLR Trigger: CCTTAAAGTGCCTCGGTCCAAGGATGATCCCGGAAA...AACATGAAGCACCTCAGAGCTTTGATCAGTTGCTTTGTTTTGTGTCATGTCACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CAA 90 bp | GCTTCCCAGGGATTCATTCAAGACAACACTCCATTAACACATACACAGATATTCTTTCCGGGATCATCCTaGGACCGAGGCACTTTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: ASQGFIQDNTPLTHTQIFFPGSS*DRGTLR Trigger: CCTTAAAGTGCCTCGGTCCAAGGATGATCCCGGAAA...GAATATCTGTGTATGTGTTAATGGAGTGTTGTCTTGAATGAATCCCTGGGAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CAA 90 bp | TATCCCAAGATCGATCCCCTCCCACTTCAAAGGACGTCTGAGACACATATTAAATCGGATTGGTGTCTATaGCCCAGTAAGAACCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: YPKIDPLPLQRTSETHIKSDWCL*PSKNPF Trigger: GAAAGGGTTCTTACTGGGCAATAGACACCAATCCGA...TTTAATATGTGTCTCAGACGTCCTTTGAAGTGGGAGGGGATCGATCTTGGGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CAA 90 bp | AGATCGATCCCCTCCCACTTCAAAGGACGTCTGAGACACATATTAAATATTTACTGGTCTGAGAGACTGTaGTTAAGGCTGCTTCGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RSIPSHFKGRLRHILNIYWSERL*LRLLRG Trigger: CCCTCGAAGCAGCCTTAACAACAGTCTCTCAGACCA...GTAAATATTTAATATGTGTCTCAGACGTCCTTTGAAGTGGGAGGGGATCGATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CAA 90 bp | TACTCTATTCCATTTGAAATTATCCCAAGATCGATCCCCTCCCACTTCAAAGGATGGTCTGAGAGACTGTaGTTAAGGCTGCTTCGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: YSIPFEIIPRSIPSHFKGWSERL*LRLLRG Trigger: CCCTCGAAGCAGCCTTAACAACAGTCTCTCAGACCA...TCCTTTGAAGTGGGAGGGGATCGATCTTGGGATAATTTCAAATGGAATAGAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CAA 90 bp | TTAAAATGGATTTCCCTCTCTGTAAAGAACCAATTAACGATCTATTCACTGTGGATTACAGGATACCTGTaGCGGGGGTGGCGGTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LKWISLSVKNQLTIYSLWITGYL*RGWRWL Trigger: CAGCCACCGCCACCCCCGCAACAGGTATCCTGTAAT...CCACAGTGAATAGATCGTTAATTGGTTCTTTACAGAGAGGGAAATCCATTTTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CAA 90 bp | CAGTCGGACTCTTCTCCTGGACAGAGCGCCCCATCTGTGTATGTATGTTTGTTATCAGCATATCGAGTGTaGCATACCAATCACTTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: QSDSSPGQSAPSVYVCLLSAYRV*HTNHLK Trigger: TTTCAAGTGATTGGTATGCAACACTCGATATGCTGA...TAACAAACATACATACACAGATGGGGCGCTCTGTCCAGGAGAAGAGTCCGACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS CCA 90 bp | CTATGTACACTTCCAACACTGTTCAAATTAACAGACGCCAAACTCTaGTCTGAGAGACTGTTGTTAAGGCTGCTTCGAGGGCTATCACTA | + |
|
Preference number: 5 (lower is better) Translates to: LCTLPTLFKLTDAKL*SERLLLRLLRGLSL Trigger: TAGTGATAGCCCTCGAAGCAGCCTTAACAACAGTCTCTCAGACCAGAGTTTGGCGTCTGTTAATTTGAACAGTGTTGGAAGTGTACATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CAA 90 bp | TGGTGTCTAGAAAACAGAGACTTGAGCAAACTACTGAGGACCTCATTTTCCCAACGTTCCATGTGCATTTaGTGTAGCATCAGATTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: WCLENRDLSKLLRTSFSQRSMCI*CSIRFL Trigger: CAGAAATCTGATGCTACACAAAATGCACATGGAACG...TTGGGAAAATGAGGTCCTCAGTAGTTTGCTCAAGTCTCTGTTTTCTAGACACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CAA 90 bp | AAGTGTCTACTTCCTCTAAAAGTAAAACTAAGCATGGCAGCACATGCTTGCAATGGAGGTTTTCCATCTTaGTGCTGTTGGACTTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: KCLLPLKVKLSMAAHACNGGFPS*CCWTSS Trigger: GGAAGAAGTCCAACAGCACAAAGATGGAAAACCTCC...ATTGCAAGCATGTGCTGCCATGCTTAGTTTTACTTTTAGAGGAAGTAGACACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000138845.9 ENSMUST00000162267.8 |
||
| CDS CCA 90 bp | GTTGTACAATGTTACTTTGTTAGTCACAGTGTTGATTGCCAGAGTTaGAGAGGCACTTCCCGAAATAATACACTCCATTCCCAAAGAATC | + |
|
Preference number: 5 (lower is better) Translates to: VVQCYFVSHSVDCQS*RGTSRNNTLHSQRI Trigger: GATTCTTTGGGAATGGAGTGTATTATTTCGGGAAGTGCCTCTCCAACTCTGGCAATCAACACTGTGACTAACAAAGTAACATTGTACAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044564.15 |
||
| CDS-3UTR CAA 90 bp | GCTTCCCAGGGATTCATTCAAGACAACACTCCATTAACACATACACAGATATTCCGTTCCATGTGCATTTaGTGTAGCATCAGATTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: ASQGFIQDNTPLTHTQIFRSMCI*CSIRFL Trigger: CAGAAATCTGATGCTACACAAAATGCACATGGAACG...GAATATCTGTGTATGTGTTAATGGAGTGTTGTCTTGAATGAATCCCTGGGAAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS-3UTR CAA 90 bp | TCCCACTTCAAAGGACGTCTGAGACACATATTAAATATTTACAGGAACACACAGTTGTTAGTCACAGTGTaGATTGCCAGAGTTGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SHFKGRLRHILNIYRNTQLLVTV*IARVGE Trigger: CTCTCCAACTCTGGCAATCAACACTGTGACTAACAA...CTGTGTGTTCCTGTAAATATTTAATATGTGTCTCAGACGTCCTTTGAAGTGGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044564.15 |
||
| CDS-3UTR CAA 90 bp | TTAAAATGGATTTCCCTCTCTGTAAAGAACCAATTAACGATCTATTCACTGTGGCCATCCTGGTCAGCGTaGTACAATGTTACCCGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LKWISLSVKNQLTIYSLWPSWSA*YNVTRS Trigger: AGAACGGGTAACATTGTACAACGCTGACCAGGATGG...CCACAGTGAATAGATCGTTAATTGGTTCTTTACAGAGAGGGAAATCCATTTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106310.9 |
||
| CDS CCA 72 bp | AGCTGGCTGTGTTGCTGTGGGTGTGGTGCTGGGTGCTaGGGACGCTGTGGGTGCTGGGGTAAACCATGCGGT | + |
|
Preference number: 6 (lower is better) Translates to: SWLCCCGCGAGC*GRCGCWGKPCG Trigger: ACCGCATGGTTTACCCCAGCACCCACAGCGTCCCCAGCACCCAGCACCACACCCACAGCAACACAGCCAGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
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| CDS CCA 72 bp | TCATCTGGAGGCAGAGGGCGCCGCATCGGGAAGGCTTaGGAAGGCATCATGTGCTGCTGGTTCATGGCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: SSGGRGRRIGKA*EGIMCCWFMAP Trigger: CGGAGCCATGAACCAGCAGCACATGATGCCTTCCCAAGCCTTCCCGATGCGGCGCCCTCTGCCTCCAGATGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
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| CDS CAA 72 bp | GTCATCTGGAGGCAGAGGGCGCCGCATCGGGAAGGCTaGGGAAGGCATCATGTGCTGCTGGTTCATGGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: VIWRQRAPHREG*GRHHVLLVHGS Trigger: GGAGCCATGAACCAGCAGCACATGATGCCTTCCCAAGCCTTCCCGATGCGGCGCCCTCTGCCTCCAGATGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
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| CDS GCA 72 bp | CTGGGGGTGCATCTGGGGGTGGGACAGCGAGACCTGTaGAACCGAATTACTACCTGTGGCACTGAGGCCACT | + |
|
Preference number: 6 (lower is better) Translates to: LGVHLGVGQRDL*NRITTCGTEAT Trigger: AGTGGCCTCAGTGCCACAGGTAGTAATTCGGTTGCACAGGTCTCGCTGTCCCACCCCCAGATGCACCCCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
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| CDS CAA 90 bp | ATCCTGGATGTCATCTGGAGGCAGAGGGCGCCGCATCGGGAAGGCTaGGGAAGGCATCATGTGCTGCTGGTTCATGGCTCCGTGATGACC | + |
|
Preference number: 6 (lower is better) Translates to: ILDVIWRQRAPHREG*GRHHVLLVHGSVMT Trigger: GGTCATCACGGAGCCATGAACCAGCAGCACATGATGCCTTCCCAAGCCTTCCCGATGCGGCGCCCTCTGCCTCCAGATGACATCCAGGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
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| CDS CAA 90 bp | ACTACCTGTGGCACTGAGGCCACTGTGATTGTTGGGCAGGCTGCTTaGGTTGCTGTGTGGGTGAGAGGTCACTGTACTGCTAGGAGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: TTCGTEATVIVGQAA*VAVWVRGHCTARRV Trigger: CACTCTCCTAGCAGTACAGTGACCTCTCACCCACACAGCAACCAAAGCAGCCTGCCCAACAATCACAGTGGCCTCAGTGCCACAGGTAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS TCA 72 bp | GCGAGACCTGTGCAACCGAATTACTACCTGTGGCACTaGGGCCACTGTGATTGTTGGGCAGGCTGCTTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: ARPVQPNYYLWH*GHCDCWAGCFG Trigger: ACCAAAGCAGCCTGCCCAACAATCACAGTGGCCTCAGTGCCACAGGTAGTAATTCGGTTGCACAGGTCTCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS GCA 72 bp | GTACAAATTTCCTGCCCCGATGTGTTGGGAAGGCTTTaGTGGGTGCATGGCACCGTGACAGACATTCTGCGG | + |
|
Preference number: 6 (lower is better) Translates to: VQISCPDVLGRL*WVHGTVTDILR Trigger: CCGCAGAATGTCTGTCACGGTGCCATGCACCCAGCAAAGCCTTCCCAACACATCGGGGCAGGAAATTTGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS CCA 72 bp | CTGCCCCGATGTGTTGGGAAGGCTTTGCTGGGTGCATaGCACCGTGACAGACATTCTGCGGAACATTACTCT | + |
|
Preference number: 6 (lower is better) Translates to: LPRCVGKALLGA*HRDRHSAEHYS Trigger: AGAGTAATGTTCCGCAGAATGTCTGTCACGGTGCCATGCACCCAGCAAAGCCTTCCCAACACATCGGGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS TCA 72 bp | ATGTGTTGGGAAGGCTTTGCTGGGTGCATGGCACCGTaGCAGACATTCTGCGGAACATTACTCTGCGAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: MCWEGFAGCMAP*QTFCGTLLCEW Trigger: CCACTCGCAGAGTAATGTTCCGCAGAATGTCTGTCACGGTGCCATGCACCCAGCAAAGCCTTCCCAACACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS CAA 72 bp | TGTACAAATTTCCTGCCCCGATGTGTTGGGAAGGCTTaGCTGGGTGCATGGCACCGTGACAGACATTCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: CTNFLPRCVGKA*LGAWHRDRHSA Trigger: CGCAGAATGTCTGTCACGGTGCCATGCACCCAGCAAAGCCTTCCCAACACATCGGGGCAGGAAATTTGTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS GCA 72 bp | GTCAGCGTTGTACAATGTTACCCGTTCTACGGATCTTaGCCTCTTCTTTGGCCGAGTAGGCAGCGTGTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: VSVVQCYPFYGS*PLLWPSRQRVF Trigger: GAAGACACGCTGCCTACTCGGCCAAAGAAGAGGGCAAGATCCGTAGAACGGGTAACATTGTACAACGCTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106310.9 |
||
| CDS CCA 72 bp | GCATCAGATTTCTGGATGGCTGCTCTCATGGTGAGCTaGGGTAACCAGTCCATAGATGTTAGGCTGCTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ASDFWMAALMVS*GNQSIDVRLLS Trigger: GGAGAGCAGCCTAACATCTATGGACTGGTTACCCCAGCTCACCATGAGAGCAGCCATCCAGAAATCTGATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 ENSMUST00000137560.8 ENSMUST00000138845.9 ENSMUST00000160219.2 ENSMUST00000162267.8 ENSMUST00000176012.8 |
||
| CDS CCA 72 bp | GTTCATGGCTCCGTGATGACCTGCCATCGTAGTTCCTaGAGTGTTGAGCGCCTGTGGAATATGAGGATAACC | + |
|
Preference number: 6 (lower is better) Translates to: VHGSVMTCHRSS*SVERLWNMRIT Trigger: GGTTATCCTCATATTCCACAGGCGCTCAACACTCCAGGAACTACGATGGCAGGTCATCACGGAGCCATGAAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS CCA 72 bp | CAATGTTACCCGTTCTACGGATCTTGCCCTCTTCTTTaGCCGAGTAGGCAGCGTGTCTTCCTTCGGATTGGT | + |
|
Preference number: 6 (lower is better) Translates to: QCYPFYGSCPLL*PSRQRVFLRIG Trigger: ACCAATCCGAAGGAAGACACGCTGCCTACTCGGCCAAAGAAGAGGGCAAGATCCGTAGAACGGGTAACATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106310.9 |
||
| CDS CAA 72 bp | CCTGGAATCTATGTACAAATTTCCTGCCCCGATGTGTaGGGAAGGCTTTGCTGGGTGCATGGCACCGTGACA | + |
|
Preference number: 6 (lower is better) Translates to: PGIYVQISCPDV*GRLCWVHGTVT Trigger: TGTCACGGTGCCATGCACCCAGCAAAGCCTTCCCAACACATCGGGGCAGGAAATTTGTACATAGATTCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS CAA 72 bp | CTGCTTCGAGGGCTATCACTACCATCCTGGTCAGCGTaGTACAATGTTACCCGTTCTACGGATCTTGCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: LLRGLSLPSWSA*YNVTRSTDLAL Trigger: GAGGGCAAGATCCGTAGAACGGGTAACATTGTACAACGCTGACCAGGATGGTAGTGATAGCCCTCGAAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106310.9 |
||
| CDS GCA 72 bp | AGTAGGCAGCGTGTCTTCCTTCGGATTGGTGTCTATTaGCCAGTAAGAACCCTTTCCGGGATCATCCTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: SRQRVFLRIGVY*PVRTLSGIILG Trigger: TCCAAGGATGATCCCGGAAAGGGTTCTTACTGGGCAATAGACACCAATCCGAAGGAAGACACGCTGCCTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS CCA 72 bp | CCCGTTCCATGTGCATTTTGTGTAGCATCAGATTTCTaGATGGCTGCTCTCATGGTGAGCTGGGGTAACCAG | + |
|
Preference number: 6 (lower is better) Translates to: PVPCAFCVASDF*MAALMVSWGNQ Trigger: CTGGTTACCCCAGCTCACCATGAGAGCAGCCATCCAGAAATCTGATGCTACACAAAATGCACATGGAACGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 ENSMUST00000137560.8 ENSMUST00000138845.9 ENSMUST00000160219.2 ENSMUST00000162267.8 ENSMUST00000176012.8 |
||
| CDS CAA 90 bp | TGGAATCTATGTACAAATTTCCTGCCCCGATGTGTTGGGAAGGCTTaGCTGGGTGCATGGCACCGTGACAGACATTCTGCGGAACATTAC | + |
|
Preference number: 6 (lower is better) Translates to: WNLCTNFLPRCVGKA*LGAWHRDRHSAEHY Trigger: GTAATGTTCCGCAGAATGTCTGTCACGGTGCCATGCACCCAGCAAAGCCTTCCCAACACATCGGGGCAGGAAATTTGTACATAGATTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS CAA 90 bp | ACACTGTTCAAATTAACAGACGCCAAACTCTGGTCTGAGAGACTGTaGTTAAGGCTGCTTCGAGGGCTATCACTACCATCCTGGTCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: TLFKLTDAKLWSERL*LRLLRGLSLPSWSA Trigger: CGCTGACCAGGATGGTAGTGATAGCCCTCGAAGCAGCCTTAACAACAGTCTCTCAGACCAGAGTTTGGCGTCTGTTAATTTGAACAGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS TCA 72 bp | GATCAGCGAACTGAACCTGATCTAATGACCAGTTCTTaGGATCCGCCTGCCTCATACTCTCCATCAGACCTT | + |
|
Preference number: 6 (lower is better) Translates to: DQRTEPDLMTSS*DPPASYSPSDL Trigger: AAGGTCTGATGGAGAGTATGAGGCAGGCGGATCTCAAGAACTGGTCATTAGATCAGGTTCAGTTCGCTGATC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
||
| CDS CCA 72 bp | TTGTTAAGGCTGCTTCGAGGGCTATCACTACCATCCTaGTCAGCGTTGTACAATGTTACCCGTTCTACGGAT | + |
|
Preference number: 6 (lower is better) Translates to: LLRLLRGLSLPS*SALYNVTRSTD Trigger: ATCCGTAGAACGGGTAACATTGTACAACGCTGACCAGGATGGTAGTGATAGCCCTCGAAGCAGCCTTAACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106310.9 |
||
| CDS CCA 72 bp | CTTCCAACACTGTTCAAATTAACAGACGCCAAACTCTaGTCTGAGAGACTGTTGTTAAGGCTGCTTCGAGGG | + |
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Preference number: 6 (lower is better) Translates to: LPTLFKLTDAKL*SERLLLRLLRG Trigger: CCCTCGAAGCAGCCTTAACAACAGTCTCTCAGACCAGAGTTTGGCGTCTGTTAATTTGAACAGTGTTGGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
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| CDS CAA 72 bp | AAATTAACAGACGCCAAACTCTGGTCTGAGAGACTGTaGTTAAGGCTGCTTCGAGGGCTATCACTACCATCC | + |
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Preference number: 6 (lower is better) Translates to: KLTDAKLWSERL*LRLLRGLSLPS Trigger: GGATGGTAGTGATAGCCCTCGAAGCAGCCTTAACAACAGTCTCTCAGACCAGAGTTTGGCGTCTGTTAATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
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| CDS CAA 90 bp | GTCAAGGAGTGCATTCTTCTTAGAAATTCCCGTTCCATGTGCATTTaGTGTAGCATCAGATTTCTGGATGGCTGCTCTCATGGTGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: VKECILLRNSRSMCI*CSIRFLDGCSHGEL Trigger: CAGCTCACCATGAGAGCAGCCATCCAGAAATCTGATGCTACACAAAATGCACATGGAACGGGAATTTCTAAGAAGAATGCACTCCTTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 ENSMUST00000137560.8 ENSMUST00000138845.9 ENSMUST00000160219.2 ENSMUST00000162267.8 ENSMUST00000176012.8 |
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| CDS TCA 72 bp | AACACTGTTCAAATTAACAGACGCCAAACTCTGGTCTaGGAGACTGTTGTTAAGGCTGCTTCGAGGGCTATC | + |
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Preference number: 6 (lower is better) Translates to: NTVQINRRQTLV*ETVVKAASRAI Trigger: GATAGCCCTCGAAGCAGCCTTAACAACAGTCTCTCAGACCAGAGTTTGGCGTCTGTTAATTTGAACAGTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
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| CDS CCA 72 bp | ATTGTATTCTGTGAAAAGGAGTTGTTTTTCTCGTTCTaGAAGGTTGTACTGTGGCTGCTGCTGCTGCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: IVFCEKELFFSF*KVVLWLLLLLR Trigger: CCTCAGCAGCAGCAGCAGCCACAGTACAACCTTCCAGAACGAGAAAAACAACTCCTTTTCACAGAATACAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
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| CDS CCA 72 bp | TTGTTAAGGCTGCTTCGAGGGCTATCACTACCATCCTaGTCAGCGTTGTACAATGTTACTTTGTTAGTCACA | + |
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Preference number: 6 (lower is better) Translates to: LLRLLRGLSLPS*SALYNVTLLVT Trigger: TGTGACTAACAAAGTAACATTGTACAACGCTGACCAGGATGGTAGTGATAGCCCTCGAAGCAGCCTTAACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044564.15 |
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| CDS CAA 72 bp | TGGCAATTCGACAGCTTTCCTTCAGCATATCGAGTGTaGCATACCAATCACTTGAAACACCAGAATTACAGG | + |
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Preference number: 6 (lower is better) Translates to: WQFDSFPSAYRV*HTNHLKHQNYR Trigger: CCTGTAATTCTGGTGTTTCAAGTGATTGGTATGCAACACTCGATATGCTGAAGGAAAGCTGTCGAATTGCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 |
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| CDS CAA 72 bp | TGCATTCTTCTTAGAAATTCCCGTTCCATGTGCATTTaGTGTAGCATCAGATTTCTGGATGGCTGCTCTCAT | + |
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Preference number: 6 (lower is better) Translates to: CILLRNSRSMCI*CSIRFLDGCSH Trigger: ATGAGAGCAGCCATCCAGAAATCTGATGCTACACAAAATGCACATGGAACGGGAATTTCTAAGAAGAATGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000044564.15 ENSMUST00000106310.9 ENSMUST00000137560.8 ENSMUST00000138845.9 ENSMUST00000160219.2 ENSMUST00000162267.8 ENSMUST00000176012.8 |
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