Pregenerated sensors for FOXJ1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034227Ensembl transcript IDs: ENSMUST00000036215.8
Found 124 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGCCCAGTCCCTGCCTGGGTGCTGAGATGTCCACGGGCCTGTCTTaGGAGGCAGTTCTGGGCCCTGACTTGAGCACTGTCCGGAGATGG | + |
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Preference number: 1 (lower is better) Translates to: WPSPCLGAEMSTGLS*EAVLGPDLSTVRRW Trigger: CCATCTCCGGACAGTGCTCAAGTCAGGGCCCAGAACTGCCTCCCAAGACAGGCCCGTGGACATCTCAGCACCCAGGCAGGGACTGGGCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| 3UTR CCA 90 bp | CCCAGTTCCCAGTCTTCTGGGCTTGGATATGAGGACATCCCCAGCTaGCAGCAGTGTGGCCTTCAGAGACCTGGCCCAGTCCCTGCCTGG | + |
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Preference number: 1 (lower is better) Translates to: PSSQSSGLGYEDIPS*QQCGLQRPGPVPAW Trigger: CCAGGCAGGGACTGGGCCAGGTCTCTGAAGGCCACACTGCTGCCAGCTGGGGATGTCCTCATATCCAAGCCCAGAAGACTGGGAACTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| 3UTR CCA 90 bp | CACCCCACACCCCATCTTCCTGATGCTCTTAGCCTCAAGTCAGGCTaGAAGGTTTGTAGCCTCCCTTGTGCAGGTGATGGACCAGGGAAA | + |
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Preference number: 1 (lower is better) Translates to: HPTPHLPDALSLKSG*KVCSLPCAGDGPGK Trigger: TTTCCCTGGTCCATCACCTGCACAAGGGAGGCTACAAACCTTCCAGCCTGACTTGAGGCTAAGAGCATCAGGAAGATGGGGTGTGGGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| 3UTR CCA 90 bp | AAGGCTGCCAGGGCCCCTGGGAAAGCTCTGCCGGGAGGGGCCTCCTaGGAATTAATTTGTTATCATCTAATGAGCGTTTGTTGTACCTGG | + |
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Preference number: 1 (lower is better) Translates to: KAARAPGKALPGGAS*ELICYHLMSVCCTW Trigger: CCAGGTACAACAAACGCTCATTAGATGATAACAAATTAATTCCCAGGAGGCCCCTCCCGGCAGAGCTTTCCCAGGGGCCCTGGCAGCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| 3UTR CCA 90 bp | TCCTGGGAATTAATTTGTTATCATCTAATGAGCGTTTGTTGTACCTaGGAACTTTCTCTGGGTAGAGACCCAGAGAAGCAGCAGAAGTGG | + |
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Preference number: 1 (lower is better) Translates to: SWELICYHLMSVCCT*ELSLGRDPEKQQKW Trigger: CCACTTCTGCTGCTTCTCTGGGTCTCTACCCAGAGAAAGTTCCCAGGTACAACAAACGCTCATTAGATGATAACAAATTAATTCCCAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| 3UTR-3UTR TCA 90 bp | AAGGCTGCCAGGGCCCCTGGGAAAGCTCTGCCGGGAGGGGCCTCCTGGGAATTATCCCTGCCTGGGTGCTaGGATGTCCACGGGCCTGTC | + |
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Preference number: 2 (lower is better) Translates to: KAARAPGKALPGGASWELSLPGC*DVHGPV Trigger: GACAGGCCCGTGGACATCTCAGCACCCAGGCAGGGA...TAATTCCCAGGAGGCCCCTCCCGGCAGAGCTTTCCCAGGGGCCCTGGCAGCCTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGCTGCCAGGGCCCCTGGGAAAGCTCTGCCGGGAGGGGCCTCCTGGGAATTAGAGGACATCCCCAGCTaGCAGCAGTGTGGCCTTCAG | + |
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Preference number: 2 (lower is better) Translates to: KAARAPGKALPGGASWELEDIPS*QQCGLQ Trigger: CTGAAGGCCACACTGCTGCCAGCTGGGGATGTCCTC...TAATTCCCAGGAGGCCCCTCCCGGCAGAGCTTTCCCAGGGGCCCTGGCAGCCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| 3UTR-3UTR CCA 90 bp | GAGGGTAGATTCAGGTCCCAGCTCCAGGGGTCAAGGTGGAGCAAGGCCTGGTCCTGGCCTTCAGAGACCTaGCCCAGTCCCTGCCTGGGT | + |
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Preference number: 2 (lower is better) Translates to: EGRFRSQLQGSRWSKAWSWPSET*PSPCLG Trigger: ACCCAGGCAGGGACTGGGCCAGGTCTCTGAAGGCCA...GGACCAGGCCTTGCTCCACCTTGACCCCTGGAGCTGGGACCTGAATCTACCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| 3UTR-3UTR TCA 90 bp | GAGGGTAGATTCAGGTCCCAGCTCCAGGGGTCAAGGTGGAGCAAGGCCTGGTCCGGGAACATGGGTGGATaGAACACTGTGTGTATGGGG | + |
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Preference number: 2 (lower is better) Translates to: EGRFRSQLQGSRWSKAWSGNMGG*NTVCMG Trigger: CCCCATACACACAGTGTTTCATCCACCCATGTTCCC...GGACCAGGCCTTGCTCCACCTTGACCCCTGGAGCTGGGACCTGAATCTACCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| 3UTR-3UTR CCA 90 bp | GAGGGTAGATTCAGGTCCCAGCTCCAGGGGTCAAGGTGGAGCAAGGCCTGGTCCCCGGGAGGGGCCTCCTaGGAATTAATTTGTTATCAT | + |
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Preference number: 2 (lower is better) Translates to: EGRFRSQLQGSRWSKAWSPGGAS*ELICYH Trigger: ATGATAACAAATTAATTCCCAGGAGGCCCCTCCCGG...GGACCAGGCCTTGCTCCACCTTGACCCCTGGAGCTGGGACCTGAATCTACCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| 3UTR-3UTR GCA 90 bp | ACCACCCCACACCCCATCTTCCTGATGCTCTTAGCCTCAAGTCAGGCTGGAAGGCCCCCACCGGATTTCTaGCTCCTTTCTTTTCCCTTC | + |
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Preference number: 2 (lower is better) Translates to: TTPHPIFLMLLASSQAGRPPPDF*LLSFPF Trigger: GAAGGGAAAAGAAAGGAGGCAGAAATCCGGTGGGGG...CCTTCCAGCCTGACTTGAGGCTAAGAGCATCAGGAAGATGGGGTGTGGGGTGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| 3UTR-3UTR CCA 90 bp | ACCACCCCACACCCCATCTTCCTGATGCTCTTAGCCTCAAGTCAGGCTGGAAGGCCTGGGAACTTTCTCTaGGTAGAGACCCAGAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: TTPHPIFLMLLASSQAGRPGNFL*VETQRS Trigger: GCTTCTCTGGGTCTCTACCCAGAGAAAGTTCCCAGG...CCTTCCAGCCTGACTTGAGGCTAAGAGCATCAGGAAGATGGGGTGTGGGGTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| 3UTR-3UTR CCA 90 bp | ACCACCCCACACCCCATCTTCCTGATGCTCTTAGCCTCAAGTCAGGCTGGAAGGGGGCTTGAGGGAACATaGGTGGATGAAACACTGTGT | + |
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Preference number: 2 (lower is better) Translates to: TTPHPIFLMLLASSQAGRGLEGT*VDETLC Trigger: ACACAGTGTTTCATCCACCCATGTTCCCTCAAGCCC...CCTTCCAGCCTGACTTGAGGCTAAGAGCATCAGGAAGATGGGGTGTGGGGTGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| 3UTR-3UTR TCA 90 bp | ATCTTCCTGATGCTCTTAGCCTCAAGTCAGGCTGGAAGGTTTGTAGCCTCCCTTTTCTGGGCTTGGATATaGGGACATCCCCAGCTGGCA | + |
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Preference number: 2 (lower is better) Translates to: IFLMLLASSQAGRFVASLFWAWI*GHPQLA Trigger: TGCCAGCTGGGGATGTCCTCATATCCAAGCCCAGAA...AAGGGAGGCTACAAACCTTCCAGCCTGACTTGAGGCTAAGAGCATCAGGAAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| 3UTR CAA 90 bp | GGCCCCTGGGAAAGCTCTGCCGGGAGGGGCCTCCTGGGAATTAATTaGTTATCATCTAATGAGCGTTTGTTGTACCTGGGAACTTTCTCT | + |
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Preference number: 2 (lower is better) Translates to: GPWESSAGRGLLGIN*LSSNERLLYLGTFS Trigger: AGAGAAAGTTCCCAGGTACAACAAACGCTCATTAGATGATAACAAATTAATTCCCAGGAGGCCCCTCCCGGCAGAGCTTTCCCAGGGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| 3UTR-3UTR CCA 90 bp | AGCTCTGCCGGGAGGGGCCTCCTGGGAATTAATTTGTTATCATCTAATGAGCGTGAGAAGCAGCAGAAGTaGGTGAGGCGAAGCTTTGGT | + |
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Preference number: 2 (lower is better) Translates to: SSAGRGLLGINLLSSNEREKQQK*VRRSFG Trigger: ACCAAAGCTTCGCCTCACCCACTTCTGCTGCTTCTC...ACGCTCATTAGATGATAACAAATTAATTCCCAGGAGGCCCCTCCCGGCAGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| 3UTR-3UTR CCA 90 bp | ATCTTCCTGATGCTCTTAGCCTCAAGTCAGGCTGGAAGGTTTGTAGCCTCCCTTAGCGTTTGTTGTACCTaGGAACTTTCTCTGGGTAGA | + |
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Preference number: 2 (lower is better) Translates to: IFLMLLASSQAGRFVASLSVCCT*ELSLGR Trigger: TCTACCCAGAGAAAGTTCCCAGGTACAACAAACGCT...AAGGGAGGCTACAAACCTTCCAGCCTGACTTGAGGCTAAGAGCATCAGGAAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| 3UTR-3UTR CCA 90 bp | TTTCCCCAGTTAAGTCTTAGCTATAACTACATTCACTATATTAGTCTCTCCCCCCTGGTAGGACCCTTCTaGGCTTCAGCTCTCAGAGTG | + |
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Preference number: 2 (lower is better) Translates to: FPQLSLSYNYIHYISLSPLVGPF*ASALRV Trigger: CACTCTGAGAGCTGAAGCCCAGAAGGGTCCTACCAG...GGGGGAGAGACTAATATAGTGAATGTAGTTATAGCTAAGACTTAACTGGGGAAA 46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| 3UTR CCA 72 bp | TCACTCTCTCTCCCTGGCCAAGGCTGCCAGGGCCCCTaGGAAAGCTCTGCCGGGAGGGGCCTCCTGGGAATT | + |
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Preference number: 3 (lower is better) Translates to: SLSLPGQGCQGP*ESSAGRGLLGI Trigger: AATTCCCAGGAGGCCCCTCCCGGCAGAGCTTTCCCAGGGGCCCTGGCAGCCTTGGCCAGGGAGAGAGAGTGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| 3UTR TCA 72 bp | CAGGGTCCCCAGTTCCCAGTCTTCTGGGCTTGGATATaGGGACATCCCCAGCTGGCAGCAGTGTGGCCTTCA | + |
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Preference number: 3 (lower is better) Translates to: QGPQFPVFWAWI*GHPQLAAVWPS Trigger: TGAAGGCCACACTGCTGCCAGCTGGGGATGTCCTCATATCCAAGCCCAGAAGACTGGGAACTGGGGACCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| 3UTR CCA 72 bp | CAGTCTTCTGGGCTTGGATATGAGGACATCCCCAGCTaGCAGCAGTGTGGCCTTCAGAGACCTGGCCCAGTC | + |
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Preference number: 3 (lower is better) Translates to: QSSGLGYEDIPS*QQCGLQRPGPV Trigger: GACTGGGCCAGGTCTCTGAAGGCCACACTGCTGCCAGCTGGGGATGTCCTCATATCCAAGCCCAGAAGACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| 3UTR-3UTR CAA 90 bp | GAGGGTAGATTCAGGTCCCAGCTCCAGGGGTCAAGGTGGAGCAAGGCCTGGTCCTCATCTAATGAGCGTTaGTTGTACCTGGGAACTTTC | + |
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Preference number: 3 (lower is better) Translates to: EGRFRSQLQGSRWSKAWSSSNER*LYLGTF Trigger: GAAAGTTCCCAGGTACAACAAACGCTCATTAGATGA...GGACCAGGCCTTGCTCCACCTTGACCCCTGGAGCTGGGACCTGAATCTACCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| 3UTR CCA 72 bp | CCCCATCTTCCTGATGCTCTTAGCCTCAAGTCAGGCTaGAAGGTTTGTAGCCTCCCTTGTGCAGGTGATGGA | + |
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Preference number: 3 (lower is better) Translates to: PHLPDALSLKSG*KVCSLPCAGDG Trigger: TCCATCACCTGCACAAGGGAGGCTACAAACCTTCCAGCCTGACTTGAGGCTAAGAGCATCAGGAAGATGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| 3UTR-3UTR CAA 90 bp | TGGGAATTAATTTGTTATCATCTAATGAGCGTTTGTTGTACCTGGGAACTTTCTTGCCAATCCTTGGGCTaGAGGGAACATGGGTGGATG | + |
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Preference number: 3 (lower is better) Translates to: WELICYHLMSVCCTWELSCQSLG*REHGWM Trigger: CATCCACCCATGTTCCCTCAAGCCCAAGGATTGGCA...AGAAAGTTCCCAGGTACAACAAACGCTCATTAGATGATAACAAATTAATTCCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| 3UTR CCA 72 bp | TTAATTTGTTATCATCTAATGAGCGTTTGTTGTACCTaGGAACTTTCTCTGGGTAGAGACCCAGAGAAGCAG | + |
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Preference number: 3 (lower is better) Translates to: LICYHLMSVCCT*ELSLGRDPEKQ Trigger: CTGCTTCTCTGGGTCTCTACCCAGAGAAAGTTCCCAGGTACAACAAACGCTCATTAGATGATAACAAATTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS-3UTR TCA 90 bp | GAGACCTGGCCCAGTCCCTGCCTGGGTGCTGAGATGTCCACGGGCCTGTCTTGGGTCTGCCGCCAGCGGTaGCCCGGGCGCCACCAAGCC | + |
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Preference number: 4 (lower is better) Translates to: ETWPSPCLGAEMSTGLSWVCRQR*PGRHQA Trigger: GGCTTGGTGGCGCCCGGGTCACCGCTGGCGGCAGAC...CCAAGACAGGCCCGTGGACATCTCAGCACCCAGGCAGGGACTGGGCCAGGTCTC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS-3UTR GCA 90 bp | CAAGGCTGCCAGGGCCCCTGGGAAAGCTCTGCCGGGAGGGGCCTCCTGGGAATTAGCCGTGGGGGTCTGTaGCTCCTGGGGGAAGAGTGG | + |
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Preference number: 4 (lower is better) Translates to: QGCQGPWESSAGRGLLGISRGGL*LLGEEW Trigger: CCACTCTTCCCCCAGGAGGCACAGACCCCCACGGCT...AATTCCCAGGAGGCCCCTCCCGGCAGAGCTTTCCCAGGGGCCCTGGCAGCCTTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS-3UTR CCA 90 bp | CAAGGCTGCCAGGGCCCCTGGGAAAGCTCTGCCGGGAGGGGCCTCCTGGGAATTCGGGCAAAGGCAGGGTaGATGTGGACTGGGGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: QGCQGPWESSAGRGLLGIRAKAG*MWTGGS Trigger: GCTGCCCCCAGTCCACATCCACCCTGCCTTTGCCCG...AATTCCCAGGAGGCCCCTCCCGGCAGAGCTTTCCCAGGGGCCCTGGCAGCCTTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS-3UTR GCA 90 bp | GAGACCTGGCCCAGTCCCTGCCTGGGTGCTGAGATGTCCACGGGCCTGTCTTGGACACTGGCCCAGTCCTaGAGGTCAGCGGCCAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: ETWPSPCLGAEMSTGLSWTLAQS*RSAARV Trigger: CACCCTGGCCGCTGACCTGCAGGACTGGGCCAGTGT...CCAAGACAGGCCCGTGGACATCTCAGCACCCAGGCAGGGACTGGGCCAGGTCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS-3UTR CCA 90 bp | CAAGGCTGCCAGGGCCCCTGGGAAAGCTCTGCCGGGAGGGGCCTCCTGGGAATTCCTTGGCCACCCTCTTaGGCAGCGGCTGCTTTCGCT | + |
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Preference number: 4 (lower is better) Translates to: QGCQGPWESSAGRGLLGIPWPPS*AAAAFA Trigger: AGCGAAAGCAGCCGCTGCCCAAGAGGGTGGCCAAGG...AATTCCCAGGAGGCCCCTCCCGGCAGAGCTTTCCCAGGGGCCCTGGCAGCCTTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS-3UTR GCA 90 bp | GAGACCTGGCCCAGTCCCTGCCTGGGTGCTGAGATGTCCACGGGCCTGTCTTGGGCAGGGCAGTTGATGTaGCGGCCATGGACTGTAAGA | + |
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Preference number: 4 (lower is better) Translates to: ETWPSPCLGAEMSTGLSWAGQLM*RPWTVR Trigger: TCTTACAGTCCATGGCCGGCACATCAACTGCCCTGC...CCAAGACAGGCCCGTGGACATCTCAGCACCCAGGCAGGGACTGGGCCAGGTCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS-3UTR GCA 90 bp | AAGGCTGCCAGGGCCCCTGGGAAAGCTCTGCCGGGAGGGGCCTCCTGGGAATTACAGGGTGGCATCCCCTaGTTCAAAGATGGGTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: KAARAPGKALPGGASWELQGGIP*FKDGFW Trigger: CCAGAACCCATCTTTGAAGCAGGGGATGCCACCCTG...TAATTCCCAGGAGGCCCCTCCCGGCAGAGCTTTCCCAGGGGCCCTGGCAGCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS-3UTR CCA 90 bp | AAGGCTGCCAGGGCCCCTGGGAAAGCTCTGCCGGGAGGGGCCTCCTGGGAATTATCACGTGTGGGTTGGTaGCATAGTCCACGTCGTCAG | + |
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Preference number: 4 (lower is better) Translates to: KAARAPGKALPGGASWELSRVGW*HSPRRQ Trigger: CTGACGACGTGGACTATGCCACCAACCCACACGTGA...TAATTCCCAGGAGGCCCCTCCCGGCAGAGCTTTCCCAGGGGCCCTGGCAGCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS-3UTR TCA 90 bp | AAGGCTGCCAGGGCCCCTGGGAAAGCTCTGCCGGGAGGGGCCTCCTGGGAATTAAGCAGAAGTTGTCCGTaGTCCACTTGTAGATGGCCG | + |
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Preference number: 4 (lower is better) Translates to: KAARAPGKALPGGASWELSRSCP*STCRWP Trigger: CGGCCATCTACAAGTGGATCACGGACAACTTCTGCT...TAATTCCCAGGAGGCCCCTCCCGGCAGAGCTTTCCCAGGGGCCCTGGCAGCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS-3UTR GCA 90 bp | ACCACCCCACACCCCATCTTCCTGATGCTCTTAGCCTCAAGTCAGGCTGGAAGGACGACGATGTGGGCTTaGCGGGTGTGTGCGGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: TTPHPIFLMLLASSQAGRTTMWA*RVCAAA Trigger: GGCAGCCGCACACACCCGGCAAGCCCACATCGTCGT...CCTTCCAGCCTGACTTGAGGCTAAGAGCATCAGGAAGATGGGGTGTGGGGTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS-3UTR CCA 90 bp | CTGTCTTGGGAGGCAGTTCTGGGCCCTGACTTGAGCACTGTCCGGAGATGGGGTGCAGCCATTGCAGGCTaGTCAGGCTGTCATCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: LSWEAVLGPDLSTVRRWGAAIAG*SGCHPG Trigger: CCCTGGATGACAGCCTGACCAGCCTGCAATGGCTGC...ACCCCATCTCCGGACAGTGCTCAAGTCAGGGCCCAGAACTGCCTCCCAAGACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS-3UTR CCA 90 bp | ACCACCCCACACCCCATCTTCCTGATGCTCTTAGCCTCAAGTCAGGCTGGAAGGAAGGCAGGGTGGATGTaGACTGGGGGCAGCCTCCGC | + |
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Preference number: 4 (lower is better) Translates to: TTPHPIFLMLLASSQAGRKAGWM*TGGSLR Trigger: GCGGAGGCTGCCCCCAGTCCACATCCACCCTGCCTT...CCTTCCAGCCTGACTTGAGGCTAAGAGCATCAGGAAGATGGGGTGTGGGGTGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS-3UTR CCA 90 bp | ACCACCCCACACCCCATCTTCCTGATGCTCTTAGCCTCAAGTCAGGCTGGAAGGGCAGCGCTAGGTTCCTaGGAGGCCTGGCGGGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: TTPHPIFLMLLASSQAGRAALGS*EAWRAK Trigger: CTTTGCCCGCCAGGCCTCCCAGGAACCTAGCGCTGC...CCTTCCAGCCTGACTTGAGGCTAAGAGCATCAGGAAGATGGGGTGTGGGGTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS-3UTR TCA 90 bp | CTGTCTTGGGAGGCAGTTCTGGGCCCTGACTTGAGCACTGTCCGGAGATGGGGTGCATGGCCATGCAGATaGGAGTGGCATAGGAGTAGG | + |
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Preference number: 4 (lower is better) Translates to: LSWEAVLGPDLSTVRRWGAWPCR*EWHRSR Trigger: CCTACTCCTATGCCACTCTCATCTGCATGGCCATGC...ACCCCATCTCCGGACAGTGCTCAAGTCAGGGCCCAGAACTGCCTCCCAAGACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS-3UTR CCA 90 bp | GAGGGTAGATTCAGGTCCCAGCTCCAGGGGTCAAGGTGGAGCAAGGCCTGGTCCCGCCAGCCTCAAAGATaGCCTCCCAGTCAAAGTTAC | + |
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Preference number: 4 (lower is better) Translates to: EGRFRSQLQGSRWSKAWSRQPQR*PPSQSY Trigger: GTAACTTTGACTGGGAGGCCATCTTTGAGGCTGGCG...GGACCAGGCCTTGCTCCACCTTGACCCCTGGAGCTGGGACCTGAATCTACCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS-3UTR TCA 90 bp | AGCTCTGCCGGGAGGGGCCTCCTGGGAATTAATTTGTTATCATCTAATGAGCGTCTCCAGACCCTCCAGTaGGCTCAGCTCCTCCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: SSAGRGLLGINLLSSNERLQTLQ*AQLLPQ Trigger: CTGGGGGAGGAGCTGAGCTCACTGGAGGGTCTGGAG...ACGCTCATTAGATGATAACAAATTAATTCCCAGGAGGCCCCTCCCGGCAGAGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS-3UTR CCA 90 bp | GCGTTTGTTGTACCTGGGAACTTTCTCTGGGTAGAGACCCAGAGAAGCAGCAGAGGGGTCTGTGCCTCCTaGGGGAAGAGTGGGAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: AFVVPGNFLWVETQRSSRGVCAS*GKSGSL Trigger: AAGGCTCCCACTCTTCCCCCAGGAGGCACAGACCCC...TCTGCTGCTTCTCTGGGTCTCTACCCAGAGAAAGTTCCCAGGTACAACAAACGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS-3UTR CCA 90 bp | ATGAGCGTTTGTTGTACCTGGGAACTTTCTCTGGGTAGAGACCCAGAGAAGCAGAGCAGCCTGCTCCGCTaGAGGTCCCCAGGTAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: MSVCCTWELSLGRDPEKQSSLLR*RSPGSR Trigger: CCTGCTACCTGGGGACCTCCAGCGGAGCAGGCTGCT...CTGCTTCTCTGGGTCTCTACCCAGAGAAAGTTCCCAGGTACAACAAACGCTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS-3UTR TCA 90 bp | CTGTCTTGGGAGGCAGTTCTGGGCCCTGACTTGAGCACTGTCCGGAGATGGGGTAGTCAAAGTTACCTTTaGGTGGTTCCAGCTCACCCT | + |
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Preference number: 4 (lower is better) Translates to: LSWEAVLGPDLSTVRRWGSQSYL*VVPAHP Trigger: AGGGTGAGCTGGAACCACTCAAAGGTAACTTTGACT...ACCCCATCTCCGGACAGTGCTCAAGTCAGGGCCCAGAACTGCCTCCCAAGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS-3UTR GCA 90 bp | AGCTCTGCCGGGAGGGGCCTCCTGGGAATTAATTTGTTATCATCTAATGAGCGTCAGCTCCTCCCCCAGTaGGCCAGCCTCAAAGATGGC | + |
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Preference number: 4 (lower is better) Translates to: SSAGRGLLGINLLSSNERQLLPQ*ASLKDG Trigger: GCCATCTTTGAGGCTGGCGCACTGGGGGAGGAGCTG...ACGCTCATTAGATGATAACAAATTAATTCCCAGGAGGCCCCTCCCGGCAGAGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS-3UTR GCA 90 bp | GCGTTTGTTGTACCTGGGAACTTTCTCTGGGTAGAGACCCAGAGAAGCAGCAGATGGCGGATGGAATTCTaGCAGGTGGGGTCTGCATGG | + |
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Preference number: 4 (lower is better) Translates to: AFVVPGNFLWVETQRSSRWRMEF*QVGSAW Trigger: CCATGCAGACCCCACCTGGCAGAATTCCATCCGCCA...TCTGCTGCTTCTCTGGGTCTCTACCCAGAGAAAGTTCCCAGGTACAACAAACGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS-3UTR GCA 90 bp | ATGAGCGTTTGTTGTACCTGGGAACTTTCTCTGGGTAGAGACCCAGAGAAGCAGCTCTTGGGCAGCGGCTaGTTTCGCTTATGCCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: MSVCCTWELSLGRDPEKQLLGSG*FRLCPS Trigger: GCTGGGGCATAAGCGAAAGCAGCCGCTGCCCAAGAG...CTGCTTCTCTGGGTCTCTACCCAGAGAAAGTTCCCAGGTACAACAAACGCTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS-3UTR GCA 90 bp | ATGAGCGTTTGTTGTACCTGGGAACTTTCTCTGGGTAGAGACCCAGAGAAGCAGGGTTCCAGCTCACCCTaGTCCTCCTGGGTCAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: MSVCCTWELSLGRDPEKQGSSSP*SSWVSS Trigger: ACTGCTGACCCAGGAGGAGCAGGGTGAGCTGGAACC...CTGCTTCTCTGGGTCTCTACCCAGAGAAAGTTCCCAGGTACAACAAACGCTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS-3UTR CCA 90 bp | ATCTTCCTGATGCTCTTAGCCTCAAGTCAGGCTGGAAGGTTTGTAGCCTCCCTTATGTGCACGACGATGTaGGCTTGCCGGGTGTGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: IFLMLLASSQAGRFVASLMCTTM*ACRVCA Trigger: CGCACACACCCGGCAAGCCCACATCGTCGTGCACAT...AAGGGAGGCTACAAACCTTCCAGCCTGACTTGAGGCTAAGAGCATCAGGAAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS-3UTR CCA 90 bp | ATCTTCCTGATGCTCTTAGCCTCAAGTCAGGCTGGAAGGTTTGTAGCCTCCCTTCCCCTGCTTCAAAGATaGGTTCTGGGGGCAGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: IFLMLLASSQAGRFVASLPLLQR*VLGAGS Trigger: GCTGCCTGCCCCCAGAACCCATCTTTGAAGCAGGGG...AAGGGAGGCTACAAACCTTCCAGCCTGACTTGAGGCTAAGAGCATCAGGAAGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS-3UTR CCA 90 bp | AGCTCTGCCGGGAGGGGCCTCCTGGGAATTAATTTGTTATCATCTAATGAGCGTGGGTGGCTTCACGTGTaGGTTGGTGGCATAGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SSAGRGLLGINLLSSNERGWLHV*VGGIVH Trigger: GTGGACTATGCCACCAACCCACACGTGAAGCCACCC...ACGCTCATTAGATGATAACAAATTAATTCCCAGGAGGCCCCTCCCGGCAGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS-3UTR CCA 90 bp | ACCACCCCACACCCCATCTTCCTGATGCTCTTAGCCTCAAGTCAGGCTGGAAGGAAAGTTACCTTTGAGTaGTTCCAGCTCACCCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TTPHPIFLMLLASSQAGRKVTFE*FQLTLL Trigger: GAGCAGGGTGAGCTGGAACCACTCAAAGGTAACTTT...CCTTCCAGCCTGACTTGAGGCTAAGAGCATCAGGAAGATGGGGTGTGGGGTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS-3UTR CCA 90 bp | AGCTCTGCCGGGAGGGGCCTCCTGGGAATTAATTTGTTATCATCTAATGAGCGTGCTTCACGTGTGGGTTaGTGGCATAGTCCACGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: SSAGRGLLGINLLSSNERASRVG*WHSPRR Trigger: ACGACGTGGACTATGCCACCAACCCACACGTGAAGC...ACGCTCATTAGATGATAACAAATTAATTCCCAGGAGGCCCCTCCCGGCAGAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS-3UTR CCA 90 bp | ATGAGCGTTTGTTGTACCTGGGAACTTTCTCTGGGTAGAGACCCAGAGAAGCAGTCTTGGTGGCCTTGCTaGCTTGCATGGCCATGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: MSVCCTWELSLGRDPEKQSWWPC*LAWPCR Trigger: TCTGCATGGCCATGCAAGCCAGCAAGGCCACCAAGA...CTGCTTCTCTGGGTCTCTACCCAGAGAAAGTTCCCAGGTACAACAAACGCTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS-3UTR TCA 90 bp | ATCTTCCTGATGCTCTTAGCCTCAAGTCAGGCTGGAAGGTTTGTAGCCTCCCTTTGGGAGCCTTGGCGTTaGGAATGGAGAATTCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: IFLMLLASSQAGRFVASLWEPWR*EWRIPA Trigger: TGCAGGAATTCTCCATTCTCAACGCCAAGGCTCCCA...AAGGGAGGCTACAAACCTTCCAGCCTGACTTGAGGCTAAGAGCATCAGGAAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS-3UTR GCA 90 bp | ATCTTCCTGATGCTCTTAGCCTCAAGTCAGGCTGGAAGGTTTGTAGCCTCCCTTAATTCCTGCAGCCATTaGAGGCTGGTCAGGCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: IFLMLLASSQAGRFVASLNSCSH*RLVRLS Trigger: TGACAGCCTGACCAGCCTGCAATGGCTGCAGGAATT...AAGGGAGGCTACAAACCTTCCAGCCTGACTTGAGGCTAAGAGCATCAGGAAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS-3UTR GCA 90 bp | ATCTTCCTGATGCTCTTAGCCTCAAGTCAGGCTGGAAGGTTTGTAGCCTCCCTTAGAATGGAGAATTCCTaGAGCCATTGCAGGCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: IFLMLLASSQAGRFVASLRMENS*SHCRLV Trigger: GACCAGCCTGCAATGGCTGCAGGAATTCTCCATTCT...AAGGGAGGCTACAAACCTTCCAGCCTGACTTGAGGCTAAGAGCATCAGGAAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS-3UTR CCA 90 bp | TGTTATCATCTAATGAGCGTTTGTTGTACCTGGGAACTTTCTCTGGGTAGAGACAGAAGGCACCCACACTaGCCCAGTCCTGCAGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: CYHLMSVCCTWELSLGRDRRHPH*PSPAGQ Trigger: CTGACCTGCAGGACTGGGCCAGTGTGGGTGCCTTCT...GTCTCTACCCAGAGAAAGTTCCCAGGTACAACAAACGCTCATTAGATGATAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS-3UTR GCA 90 bp | TGTTATCATCTAATGAGCGTTTGTTGTACCTGGGAACTTTCTCTGGGTAGAGACCTGCCAGGTGGGGTCTaGATGGCGGAAGTAGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: CYHLMSVCCTWELSLGRDLPGGV*MAEVAE Trigger: TTCTGCTACTTCCGCCATGCAGACCCCACCTGGCAG...GTCTCTACCCAGAGAAAGTTCCCAGGTACAACAAACGCTCATTAGATGATAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS-3UTR CCA 90 bp | TGGGAATTAATTTGTTATCATCTAATGAGCGTTTGTTGTACCTGGGAACTTTCTGGTTCCTGGGAGGCCTaGCGGGCAAAGGCAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: WELICYHLMSVCCTWELSGSWEA*RAKAGW Trigger: CCACCCTGCCTTTGCCCGCCAGGCCTCCCAGGAACC...AGAAAGTTCCCAGGTACAACAAACGCTCATTAGATGATAACAAATTAATTCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS-3UTR CCA 90 bp | TGGGAATTAATTTGTTATCATCTAATGAGCGTTTGTTGTACCTGGGAACTTTCTGAGGCCGCAGGACCTTaGCCACCCTCTTGGGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: WELICYHLMSVCCTWELSEAAGP*PPSWAA Trigger: CGCTGCCCAAGAGGGTGGCCAAGGTCCTGCGGCCTC...AGAAAGTTCCCAGGTACAACAAACGCTCATTAGATGATAACAAATTAATTCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS-3UTR CCA 90 bp | TGTTATCATCTAATGAGCGTTTGTTGTACCTGGGAACTTTCTCTGGGTAGAGACTTCAAAGATGGGTTCTaGGGGCAGGCAGCCACTACC | + |
|
Preference number: 4 (lower is better) Translates to: CYHLMSVCCTWELSLGRDFKDGF*GQAATT Trigger: GGTAGTGGCTGCCTGCCCCCAGAACCCATCTTTGAA...GTCTCTACCCAGAGAAAGTTCCCAGGTACAACAAACGCTCATTAGATGATAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS-3UTR GCA 90 bp | TTTCCCCAGTTAAGTCTTAGCTATAACTACATTCACTATATTAGTCTCTCCCCCGTGGCCTTGCTGGCTTaGATGGCCATGCAGATGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FPQLSLSYNYIHYISLSPVALLA*MAMQMR Trigger: TCTCATCTGCATGGCCATGCAAGCCAGCAAGGCCAC...GGGGGAGAGACTAATATAGTGAATGTAGTTATAGCTAAGACTTAACTGGGGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS-3UTR GCA 90 bp | TTTCCCCAGTTAAGTCTTAGCTATAACTACATTCACTATATTAGTCTCTCCCCCCTCTCATCCCAGGGATaGTGTAGGAAGGATGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: FPQLSLSYNYIHYISLSPLSSQG*CRKDVA Trigger: GGCCACATCCTTCCTACAGCATCCCTGGGATGAGAG...GGGGGAGAGACTAATATAGTGAATGTAGTTATAGCTAAGACTTAACTGGGGAAA 46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS-3UTR CCA 90 bp | TGGGAATTAATTTGTTATCATCTAATGAGCGTTTGTTGTACCTGGGAACTTTCTAGGCGCTCTGCGTACTaGGGGTCGATGCGCCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: WELICYHLMSVCCTWELSRRSAY*GSMRQK Trigger: TTTCTGGCGCATCGACCCCCAGTACGCAGAGCGCCT...AGAAAGTTCCCAGGTACAACAAACGCTCATTAGATGATAACAAATTAATTCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS-3UTR CCA 90 bp | TGGGAATTAATTTGTTATCATCTAATGAGCGTTTGTTGTACCTGGGAACTTTCTAGGGTGGATGTGGACTaGGGGCAGCCTCCGCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: WELICYHLMSVCCTWELSRVDVD*GQPPLL Trigger: AAGAAGCGGAGGCTGCCCCCAGTCCACATCCACCCT...AGAAAGTTCCCAGGTACAACAAACGCTCATTAGATGATAACAAATTAATTCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS-3UTR CCA 90 bp | TGGGAATTAATTTGTTATCATCTAATGAGCGTTTGTTGTACCTGGGAACTTTCTTCAGCAGTAAGGTGCTaGGAGGCCGCAGGACCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: WELICYHLMSVCCTWELSSAVRC*EAAGPW Trigger: CCAAGGTCCTGCGGCCTCCCAGCACCTTACTGCTGA...AGAAAGTTCCCAGGTACAACAAACGCTCATTAGATGATAACAAATTAATTCCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS-3UTR CCA 90 bp | TGGGAATTAATTTGTTATCATCTAATGAGCGTTTGTTGTACCTGGGAACTTTCTTCACCCTGCTCCTCCTaGGTCAGCAGTAAGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WELICYHLMSVCCTWELSSPCSS*VSSKVL Trigger: CAGCACCTTACTGCTGACCCAGGAGGAGCAGGGTGA...AGAAAGTTCCCAGGTACAACAAACGCTCATTAGATGATAACAAATTAATTCCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS TCA 90 bp | GGGTGTGTGCGGCTGCCCAAGGCAGGCAGGGTCTGCCGCCAGCGGTaGCCCGGGCGCCACCAAGCCCGGCACTTGGTGGTAGCCGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: GCVRLPKAGRVCRQR*PGRHQARHLVVAVG Trigger: CCCCACGGCTACCACCAAGTGCCGGGCTTGGTGGCGCCCGGGTCACCGCTGGCGGCAGACCCTGCCTGCCTTGGGCAGCCGCACACACCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS GCA 90 bp | GCAGCCCCGGGGGCGCGCTTCGAGATGTGCACGACGATGTGGGCTTaGCGGGTGTGTGCGGCTGCCCAAGGCAGGCAGGGTCTGCCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: AAPGARFEMCTTMWA*RVCAAAQGRQGLPP Trigger: TGGCGGCAGACCCTGCCTGCCTTGGGCAGCCGCACACACCCGGCAAGCCCACATCGTCGTGCACATCTCGAAGCGCGCCCCCGGGGCTGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS CCA 90 bp | GGGCCTGCAGCCCCGGGGGCGCGCTTCGAGATGTGCACGACGATGTaGGCTTGCCGGGTGTGTGCGGCTGCCCAAGGCAGGCAGGGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GPAAPGARFEMCTTM*ACRVCAAAQGRQGL Trigger: CAGACCCTGCCTGCCTTGGGCAGCCGCACACACCCGGCAAGCCCACATCGTCGTGCACATCTCGAAGCGCGCCCCCGGGGCTGCAGGCCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS-3UTR CAA 90 bp | AAGGCTGCCAGGGCCCCTGGGAAAGCTCTGCCGGGAGGGGCCTCCTGGGAATTACACCAAGCCCGGCACTaGGTGGTAGCCGTGGGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: KAARAPGKALPGGASWELHQARH*VVAVGV Trigger: GACCCCCACGGCTACCACCAAGTGCCGGGCTTGGTG...TAATTCCCAGGAGGCCCCTCCCGGCAGAGCTTTCCCAGGGGCCCTGGCAGCCTT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS GCA 90 bp | CACACTGGCCCAGTCCTGCAGGTCAGCGGCCAGGGTGGCATCCCCTaGTTCAAAGATGGGTTCTGGGGGCAGGCAGCCACTACCACTCTC | + |
|
Preference number: 5 (lower is better) Translates to: HTGPVLQVSGQGGIP*FKDGFWGQAATTTL Trigger: GAGAGTGGTAGTGGCTGCCTGCCCCCAGAACCCATCTTTGAAGCAGGGGATGCCACCCTGGCCGCTGACCTGCAGGACTGGGCCAGTGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS CCA 90 bp | GGCCATGCAGATGAGAGTGGCATAGGAGTAGGGTGGCTTCACGTGTaGGTTGGTGGCATAGTCCACGTCGTCAGGGGGCGGGGCCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GHADESGIGVGWLHV*VGGIVHVVRGRGLQ Trigger: CTGCAGGCCCCGCCCCCTGACGACGTGGACTATGCCACCAACCCACACGTGAAGCCACCCTACTCCTATGCCACTCTCATCTGCATGGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS GCA 90 bp | CCTGGGGGAAGAGTGGGAGCCTTGGCGTTGAGAATGGAGAATTCCTaGAGCCATTGCAGGCTGGTCAGGCTGTCATCCAGGGCGTCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: PGGRVGALALRMENS*SHCRLVRLSSRASG Trigger: GCCGGACGCCCTGGATGACAGCCTGACCAGCCTGCAATGGCTGCAGGAATTCTCCATTCTCAACGCCAAGGCTCCCACTCTTCCCCCAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS GCA 90 bp | GCAGCCTGCTCCGCTGGAGGTCCCCAGGTAGCAGGGCAGTTGATGTaGCGGCCATGGACTGTAAGATCCACATCTCCATGTGAGCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: AACSAGGPQVAGQLM*RPWTVRSTSPCELG Trigger: CCCCAGCTCACATGGAGATGTGGATCTTACAGTCCATGGCCGGCACATCAACTGCCCTGCTACCTGGGGACCTCCAGCGGAGCAGGCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS CCA 90 bp | AGTCCTGCAGGTCAGCGGCCAGGGTGGCATCCCCTGCTTCAAAGATaGGTTCTGGGGGCAGGCAGCCACTACCACTCTCATCCCAGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: SPAGQRPGWHPLLQR*VLGAGSHYHSHPRD Trigger: ATCCCTGGGATGAGAGTGGTAGTGGCTGCCTGCCCCCAGAACCCATCTTTGAAGCAGGGGATGCCACCCTGGCCGCTGACCTGCAGGACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS-3UTR CAA 90 bp | GAGACCTGGCCCAGTCCCTGCCTGGGTGCTGAGATGTCCACGGGCCTGTCTTGGGTGGGAGCCTTGGCGTaGAGAATGGAGAATTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ETWPSPCLGAEMSTGLSWVGALA*RMENSC Trigger: GCAGGAATTCTCCATTCTCAACGCCAAGGCTCCCAC...CCAAGACAGGCCCGTGGACATCTCAGCACCCAGGCAGGGACTGGGCCAGGTCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS TCA 90 bp | CGTGGGGGTCTGTGCCTCCTGGGGGAAGAGTGGGAGCCTTGGCGTTaGGAATGGAGAATTCCTGCAGCCATTGCAGGCTGGTCAGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: RGGLCLLGEEWEPWR*EWRIPAAIAGWSGC Trigger: ACAGCCTGACCAGCCTGCAATGGCTGCAGGAATTCTCCATTCTCAACGCCAAGGCTCCCACTCTTCCCCCAGGAGGCACAGACCCCCACG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS GCA 90 bp | GATGTGGCCAAGAAGGTCTCATCAAAGTCCAGGCTGTCAGCAGCCTaGTCCGCTGGAGGTCCCCAGGTAGCAGGGCAGTTGATGTGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: DVAKKVSSKSRLSAA*SAGGPQVAGQLMCR Trigger: CCGGCACATCAACTGCCCTGCTACCTGGGGACCTCCAGCGGAGCAGGCTGCTGACAGCCTGGACTTTGATGAGACCTTCTTGGCCACATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS CCA 90 bp | TCCGCTGGAGGTCCCCAGGTAGCAGGGCAGTTGATGTGCCGGCCATaGACTGTAAGATCCACATCTCCATGTGAGCTGGGGCTTAGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: SAGGPQVAGQLMCRP*TVRSTSPCELGLSG Trigger: CCCGCTAAGCCCCAGCTCACATGGAGATGTGGATCTTACAGTCCATGGCCGGCACATCAACTGCCCTGCTACCTGGGGACCTCCAGCGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS CCA 90 bp | CAAGAAGGTCTCATCAAAGTCCAGGCTGTCAGCAGCCTGCTCCGCTaGAGGTCCCCAGGTAGCAGGGCAGTTGATGTGCCGGCCATGGAC | + |
|
Preference number: 5 (lower is better) Translates to: QEGLIKVQAVSSLLR*RSPGSRAVDVPAMD Trigger: GTCCATGGCCGGCACATCAACTGCCCTGCTACCTGGGGACCTCCAGCGGAGCAGGCTGCTGACAGCCTGGACTTTGATGAGACCTTCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS GCA 90 bp | AGAGTGGGAGCCTTGGCGTTGAGAATGGAGAATTCCTGCAGCCATTaGAGGCTGGTCAGGCTGTCATCCAGGGCGTCCGGCTCCTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: RVGALALRMENSCSH*RLVRLSSRASGSSM Trigger: CATGGAGGAGCCGGACGCCCTGGATGACAGCCTGACCAGCCTGCAATGGCTGCAGGAATTCTCCATTCTCAACGCCAAGGCTCCCACTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS CCA 90 bp | GCTGGCTTGCATGGCCATGCAGATGAGAGTGGCATAGGAGTAGGGTaGCTTCACGTGTGGGTTGGTGGCATAGTCCACGTCGTCAGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: AGLHGHADESGIGVG*LHVWVGGIVHVVRG Trigger: CCCCCTGACGACGTGGACTATGCCACCAACCCACACGTGAAGCCACCCTACTCCTATGCCACTCTCATCTGCATGGCCATGCAAGCCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS-3UTR CAA 90 bp | GCGTTTGTTGTACCTGGGAACTTTCTCTGGGTAGAGACCCAGAGAAGCAGCAGAGGAGGCCGCAGGACCTaGGCCACCCTCTTGGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: AFVVPGNFLWVETQRSSRGGRRT*ATLLGS Trigger: GCTGCCCAAGAGGGTGGCCAAGGTCCTGCGGCCTCC...TCTGCTGCTTCTCTGGGTCTCTACCCAGAGAAAGTTCCCAGGTACAACAAACGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS-3UTR CAA 90 bp | GAGACCTGGCCCAGTCCCTGCCTGGGTGCTGAGATGTCCACGGGCCTGTCTTGGTTCTCCCGAGGCACTTaGATGAAGCACTTGTTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: ETWPSPCLGAEMSTGLSWFSRGT*MKHLFK Trigger: CTTGAACAAGTGCTTCATCAAAGTGCCTCGGGAGAA...CCAAGACAGGCCCGTGGACATCTCAGCACCCAGGCAGGGACTGGGCCAGGTCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS TCA 90 bp | CCAGTGCGCCAGCCTCAAAGATGGCCTCCCAGTCAAAGTTACCTTTaGGTGGTTCCAGCTCACCCTGCTCCTCCTGGGTCAGCAGTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: PVRQPQRWPPSQSYL*VVPAHPAPPGSAVR Trigger: CCTTACTGCTGACCCAGGAGGAGCAGGGTGAGCTGGAACCACTCAAAGGTAACTTTGACTGGGAGGCCATCTTTGAGGCTGGCGCACTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS-3UTR CAA 90 bp | GAGGGTAGATTCAGGTCCCAGCTCCAGGGGTCAAGGTGGAGCAAGGCCTGGTCCCAGTCAAAGTTACCTTaGAGTGGTTCCAGCTCACCC | + |
|
Preference number: 5 (lower is better) Translates to: EGRFRSQLQGSRWSKAWSQSKLP*SGSSSP Trigger: GGGTGAGCTGGAACCACTCAAAGGTAACTTTGACTG...GGACCAGGCCTTGCTCCACCTTGACCCCTGGAGCTGGGACCTGAATCTACCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS GCA 90 bp | ATGGGTTCTGGGGGCAGGCAGCCACTACCACTCTCATCCCAGGGATaGTGTAGGAAGGATGTGGCCAAGAAGGTCTCATCAAAGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: MGSGGRQPLPLSSQG*CRKDVAKKVSSKSR Trigger: CCTGGACTTTGATGAGACCTTCTTGGCCACATCCTTCCTACAGCATCCCTGGGATGAGAGTGGTAGTGGCTGCCTGCCCCCAGAACCCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS-3UTR CAA 90 bp | AGCTCTGCCGGGAGGGGCCTCCTGGGAATTAATTTGTTATCATCTAATGAGCGTGGTGGCCTTGCTGGCTaGCATGGCCATGCAGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: SSAGRGLLGINLLSSNERGGLAG*HGHADE Trigger: CTCATCTGCATGGCCATGCAAGCCAGCAAGGCCACC...ACGCTCATTAGATGATAACAAATTAATTCCCAGGAGGCCCCTCCCGGCAGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
||
| CDS-3UTR CAA 90 bp | ATCTTCCTGATGCTCTTAGCCTCAAGTCAGGCTGGAAGGTTTGTAGCCTCCCTTGCCGACAGAGTGATCTaGGTGGCCTTGCTGGCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: IFLMLLASSQAGRFVASLADRVI*VALLAC Trigger: GCAAGCCAGCAAGGCCACCAAGATCACTCTGTCGGC...AAGGGAGGCTACAAACCTTCCAGCCTGACTTGAGGCTAAGAGCATCAGGAAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
||
| CDS-3UTR CAA 90 bp | AGCTCTGCCGGGAGGGGCCTCCTGGGAATTAATTTGTTATCATCTAATGAGCGTGAATTCCTGCAGCCATaGCAGGCTGGTCAGGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: SSAGRGLLGINLLSSNEREFLQP*QAGQAV Trigger: GACAGCCTGACCAGCCTGCAATGGCTGCAGGAATTC...ACGCTCATTAGATGATAACAAATTAATTCCCAGGAGGCCCCTCCCGGCAGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS-3UTR CAA 90 bp | ATCTTCCTGATGCTCTTAGCCTCAAGTCAGGCTGGAAGGTTTGTAGCCTCCCTTGTGATCTTGGTGGCCTaGCTGGCTTGCATGGCCATG | + |
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Preference number: 5 (lower is better) Translates to: IFLMLLASSQAGRFVASLVILVA*LACMAM Trigger: CATGGCCATGCAAGCCAGCAAGGCCACCAAGATCAC...AAGGGAGGCTACAAACCTTCCAGCCTGACTTGAGGCTAAGAGCATCAGGAAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS-3UTR CAA 90 bp | ATGAGCGTTTGTTGTACCTGGGAACTTTCTCTGGGTAGAGACCCAGAGAAGCAGGGAAGAGTGGGAGCCTaGGCGTTGAGAATGGAGAAT | + |
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Preference number: 5 (lower is better) Translates to: MSVCCTWELSLGRDPEKQGRVGA*ALRMEN Trigger: ATTCTCCATTCTCAACGCCAAGGCTCCCACTCTTCC...CTGCTTCTCTGGGTCTCTACCCAGAGAAAGTTCCCAGGTACAACAAACGCTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS-3UTR CAA 90 bp | TGGGAATTAATTTGTTATCATCTAATGAGCGTTTGTTGTACCTGGGAACTTTCTGGCAGCCTCCGCTTCTaGAAGGCCCCACTGAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: WELICYHLMSVCCTWELSGSLRF*KAPLSR Trigger: CCTGCTCAGTGGGGCCTTCAAGAAGCGGAGGCTGCC...AGAAAGTTCCCAGGTACAACAAACGCTCATTAGATGATAACAAATTAATTCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS TCA 72 bp | CGGCTGCCCAAGGCAGGCAGGGTCTGCCGCCAGCGGTaGCCCGGGCGCCACCAAGCCCGGCACTTGGTGGTA | + |
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Preference number: 6 (lower is better) Translates to: RLPKAGRVCRQR*PGRHQARHLVV Trigger: TACCACCAAGTGCCGGGCTTGGTGGCGCCCGGGTCACCGCTGGCGGCAGACCCTGCCTGCCTTGGGCAGCCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS CAA 90 bp | TGCAGCCCCGGGGGCGCGCTTCGAGATGTGCACGACGATGTGGGCTaGCCGGGTGTGTGCGGCTGCCCAAGGCAGGCAGGGTCTGCCGCC | + |
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Preference number: 6 (lower is better) Translates to: CSPGGALRDVHDDVG*PGVCGCPRQAGSAA Trigger: GGCGGCAGACCCTGCCTGCCTTGGGCAGCCGCACACACCCGGCAAGCCCACATCGTCGTGCACATCTCGAAGCGCGCCCCCGGGGCTGCA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS CCA 72 bp | GCCCCGGGGGCGCGCTTCGAGATGTGCACGACGATGTaGGCTTGCCGGGTGTGTGCGGCTGCCCAAGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: APGARFEMCTTM*ACRVCAAAQGR Trigger: CCTGCCTTGGGCAGCCGCACACACCCGGCAAGCCCACATCGTCGTGCACATCTCGAAGCGCGCCCCCGGGGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS GCA 72 bp | GTGCACGACGATGTGGGCTTGCCGGGTGTGTGCGGCTaGCCAAGGCAGGCAGGGTCTGCCGCCAGCGGTGAC | + |
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Preference number: 6 (lower is better) Translates to: VHDDVGLPGVCG*PRQAGSAASGD Trigger: GTCACCGCTGGCGGCAGACCCTGCCTGCCTTGGGCAGCCGCACACACCCGGCAAGCCCACATCGTCGTGCAC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS CCA 72 bp | GTCAGAGGCCCACCCCAGGGGGCAGCGCTAGGTTCCTaGGAGGCCTGGCGGGCAAAGGCAGGGTGGATGTGG | + |
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Preference number: 6 (lower is better) Translates to: VRGPPQGAALGS*EAWRAKAGWMW Trigger: CCACATCCACCCTGCCTTTGCCCGCCAGGCCTCCCAGGAACCTAGCGCTGCCCCCTGGGGTGGGCCTCTGAC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS CAA 72 bp | GGGGGCGCGCTTCGAGATGTGCACGACGATGTGGGCTaGCCGGGTGTGTGCGGCTGCCCAAGGCAGGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: GGALRDVHDDVG*PGVCGCPRQAG Trigger: CCCTGCCTGCCTTGGGCAGCCGCACACACCCGGCAAGCCCACATCGTCGTGCACATCTCGAAGCGCGCCCCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS GCA 72 bp | GGGGCGCGCTTCGAGATGTGCACGACGATGTGGGCTTaGCGGGTGTGTGCGGCTGCCCAAGGCAGGCAGGGT | + |
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Preference number: 6 (lower is better) Translates to: GARFEMCTTMWA*RVCAAAQGRQG Trigger: ACCCTGCCTGCCTTGGGCAGCCGCACACACCCGGCAAGCCCACATCGTCGTGCACATCTCGAAGCGCGCCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS GCA 72 bp | CCAGTCCTGCAGGTCAGCGGCCAGGGTGGCATCCCCTaGTTCAAAGATGGGTTCTGGGGGCAGGCAGCCACT | + |
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Preference number: 6 (lower is better) Translates to: PVLQVSGQGGIP*FKDGFWGQAAT Trigger: AGTGGCTGCCTGCCCCCAGAACCCATCTTTGAAGCAGGGGATGCCACCCTGGCCGCTGACCTGCAGGACTGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS CCA 72 bp | CTAGGTTCCTGGGAGGCCTGGCGGGCAAAGGCAGGGTaGATGTGGACTGGGGGCAGCCTCCGCTTCTTGAAG | + |
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Preference number: 6 (lower is better) Translates to: LGSWEAWRAKAG*MWTGGSLRFLK Trigger: CTTCAAGAAGCGGAGGCTGCCCCCAGTCCACATCCACCCTGCCTTTGCCCGCCAGGCCTCCCAGGAACCTAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS CCA 72 bp | CCACACTGGCCCAGTCCTGCAGGTCAGCGGCCAGGGTaGCATCCCCTGCTTCAAAGATGGGTTCTGGGGGCA | + |
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Preference number: 6 (lower is better) Translates to: PHWPSPAGQRPG*HPLLQRWVLGA Trigger: TGCCCCCAGAACCCATCTTTGAAGCAGGGGATGCCACCCTGGCCGCTGACCTGCAGGACTGGGCCAGTGTGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS CCA 72 bp | TGGCATAGGAGTAGGGTGGCTTCACGTGTGGGTTGGTaGCATAGTCCACGTCGTCAGGGGGCGGGGCCTGCA | + |
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Preference number: 6 (lower is better) Translates to: WHRSRVASRVGW*HSPRRQGAGPA Trigger: TGCAGGCCCCGCCCCCTGACGACGTGGACTATGCCACCAACCCACACGTGAAGCCACCCTACTCCTATGCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS CCA 72 bp | GAGTGGCATAGGAGTAGGGTGGCTTCACGTGTGGGTTaGTGGCATAGTCCACGTCGTCAGGGGGCGGGGCCT | + |
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Preference number: 6 (lower is better) Translates to: EWHRSRVASRVG*WHSPRRQGAGP Trigger: AGGCCCCGCCCCCTGACGACGTGGACTATGCCACCAACCCACACGTGAAGCCACCCTACTCCTATGCCACTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS CCA 72 bp | GGCCAGGGTGGCATCCCCTGCTTCAAAGATGGGTTCTaGGGGCAGGCAGCCACTACCACTCTCATCCCAGGG | + |
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Preference number: 6 (lower is better) Translates to: GQGGIPCFKDGF*GQAATTTLIPG Trigger: CCCTGGGATGAGAGTGGTAGTGGCTGCCTGCCCCCAGAACCCATCTTTGAAGCAGGGGATGCCACCCTGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS CAA 90 bp | CCGTGGGGGTCTGTGCCTCCTGGGGGAAGAGTGGGAGCCTTGGCGTaGAGAATGGAGAATTCCTGCAGCCATTGCAGGCTGGTCAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: PWGSVPPGGRVGALA*RMENSCSHCRLVRL Trigger: CAGCCTGACCAGCCTGCAATGGCTGCAGGAATTCTCCATTCTCAACGCCAAGGCTCCCACTCTTCCCCCAGGAGGCACAGACCCCCACGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS CCA 72 bp | GGTCAGCGGCCAGGGTGGCATCCCCTGCTTCAAAGATaGGTTCTGGGGGCAGGCAGCCACTACCACTCTCAT | + |
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Preference number: 6 (lower is better) Translates to: GQRPGWHPLLQR*VLGAGSHYHSH Trigger: ATGAGAGTGGTAGTGGCTGCCTGCCCCCAGAACCCATCTTTGAAGCAGGGGATGCCACCCTGGCCGCTGACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS GCA 72 bp | GCCTTGGCGTTGAGAATGGAGAATTCCTGCAGCCATTaGAGGCTGGTCAGGCTGTCATCCAGGGCGTCCGGC | + |
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Preference number: 6 (lower is better) Translates to: ALALRMENSCSH*RLVRLSSRASG Trigger: GCCGGACGCCCTGGATGACAGCCTGACCAGCCTGCAATGGCTGCAGGAATTCTCCATTCTCAACGCCAAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS CAA 72 bp | GCCTGCTCCGCTGGAGGTCCCCAGGTAGCAGGGCAGTaGATGTGCCGGCCATGGACTGTAAGATCCACATCT | + |
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Preference number: 6 (lower is better) Translates to: ACSAGGPQVAGQ*MCRPWTVRSTS Trigger: AGATGTGGATCTTACAGTCCATGGCCGGCACATCAACTGCCCTGCTACCTGGGGACCTCCAGCGGAGCAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS CAA 90 bp | CTGTCAGCAGCCTGCTCCGCTGGAGGTCCCCAGGTAGCAGGGCAGTaGATGTGCCGGCCATGGACTGTAAGATCCACATCTCCATGTGAG | + |
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Preference number: 6 (lower is better) Translates to: LSAACSAGGPQVAGQ*MCRPWTVRSTSPCE Trigger: CTCACATGGAGATGTGGATCTTACAGTCCATGGCCGGCACATCAACTGCCCTGCTACCTGGGGACCTCCAGCGGAGCAGGCTGCTGACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS GCA 72 bp | AAGAAGGTCTCATCAAAGTCCAGGCTGTCAGCAGCCTaGTCCGCTGGAGGTCCCCAGGTAGCAGGGCAGTTG | + |
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Preference number: 6 (lower is better) Translates to: KKVSSKSRLSAA*SAGGPQVAGQL Trigger: CAACTGCCCTGCTACCTGGGGACCTCCAGCGGAGCAGGCTGCTGACAGCCTGGACTTTGATGAGACCTTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS CAA 72 bp | AGCCTTGGCGTTGAGAATGGAGAATTCCTGCAGCCATaGCAGGCTGGTCAGGCTGTCATCCAGGGCGTCCGG | + |
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Preference number: 6 (lower is better) Translates to: SLGVENGEFLQP*QAGQAVIQGVR Trigger: CCGGACGCCCTGGATGACAGCCTGACCAGCCTGCAATGGCTGCAGGAATTCTCCATTCTCAACGCCAAGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS CAA 90 bp | AAGAGTGGGAGCCTTGGCGTTGAGAATGGAGAATTCCTGCAGCCATaGCAGGCTGGTCAGGCTGTCATCCAGGGCGTCCGGCTCCTCCAT | + |
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Preference number: 6 (lower is better) Translates to: KSGSLGVENGEFLQP*QAGQAVIQGVRLLH Trigger: ATGGAGGAGCCGGACGCCCTGGATGACAGCCTGACCAGCCTGCAATGGCTGCAGGAATTCTCCATTCTCAACGCCAAGGCTCCCACTCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS CAA 90 bp | CCCAGTGCGCCAGCCTCAAAGATGGCCTCCCAGTCAAAGTTACCTTaGAGTGGTTCCAGCTCACCCTGCTCCTCCTGGGTCAGCAGTAAG | + |
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Preference number: 6 (lower is better) Translates to: PSAPASKMASQSKLP*SGSSSPCSSWVSSK Trigger: CTTACTGCTGACCCAGGAGGAGCAGGGTGAGCTGGAACCACTCAAAGGTAACTTTGACTGGGAGGCCATCTTTGAGGCTGGCGCACTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS GCA 72 bp | GGGGGCAGGCAGCCACTACCACTCTCATCCCAGGGATaGTGTAGGAAGGATGTGGCCAAGAAGGTCTCATCA | + |
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Preference number: 6 (lower is better) Translates to: GGRQPLPLSSQG*CRKDVAKKVSS Trigger: TGATGAGACCTTCTTGGCCACATCCTTCCTACAGCATCCCTGGGATGAGAGTGGTAGTGGCTGCCTGCCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS CAA 72 bp | TCTGTGCCTCCTGGGGGAAGAGTGGGAGCCTTGGCGTaGAGAATGGAGAATTCCTGCAGCCATTGCAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: SVPPGGRVGALA*RMENSCSHCRL Trigger: CAGCCTGCAATGGCTGCAGGAATTCTCCATTCTCAACGCCAAGGCTCCCACTCTTCCCCCAGGAGGCACAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS TCA 72 bp | TCTTGGTGGCCTTGCTGGCTTGCATGGCCATGCAGATaGGAGTGGCATAGGAGTAGGGTGGCTTCACGTGTG | + |
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Preference number: 6 (lower is better) Translates to: SWWPCWLAWPCR*EWHRSRVASRV Trigger: CACACGTGAAGCCACCCTACTCCTATGCCACTCTCATCTGCATGGCCATGCAAGCCAGCAAGGCCACCAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS GCA 72 bp | AGAGTGGGAGCCTTGGCGTTGAGAATGGAGAATTCCTaGAGCCATTGCAGGCTGGTCAGGCTGTCATCCAGG | + |
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Preference number: 6 (lower is better) Translates to: RVGALALRMENS*SHCRLVRLSSR Trigger: CCTGGATGACAGCCTGACCAGCCTGCAATGGCTGCAGGAATTCTCCATTCTCAACGCCAAGGCTCCCACTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS CCA 72 bp | CATGGCCATGCAGATGAGAGTGGCATAGGAGTAGGGTaGCTTCACGTGTGGGTTGGTGGCATAGTCCACGTC | + |
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Preference number: 6 (lower is better) Translates to: HGHADESGIGVG*LHVWVGGIVHV Trigger: GACGTGGACTATGCCACCAACCCACACGTGAAGCCACCCTACTCCTATGCCACTCTCATCTGCATGGCCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS CAA 72 bp | CCAGCCTCAAAGATGGCCTCCCAGTCAAAGTTACCTTaGAGTGGTTCCAGCTCACCCTGCTCCTCCTGGGTC | + |
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Preference number: 6 (lower is better) Translates to: PASKMASQSKLP*SGSSSPCSSWV Trigger: GACCCAGGAGGAGCAGGGTGAGCTGGAACCACTCAAAGGTAACTTTGACTGGGAGGCCATCTTTGAGGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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| CDS TCA 72 bp | CAGCCTCAAAGATGGCCTCCCAGTCAAAGTTACCTTTaGGTGGTTCCAGCTCACCCTGCTCCTCCTGGGTCA | + |
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Preference number: 6 (lower is better) Translates to: QPQRWPPSQSYL*VVPAHPAPPGS Trigger: TGACCCAGGAGGAGCAGGGTGAGCTGGAACCACTCAAAGGTAACTTTGACTGGGAGGCCATCTTTGAGGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036215.8 |
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