Pregenerated sensors for FOXI2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048377Ensembl transcript IDs: ENSMUST00000060356.8, ENSMUST00000238917.2
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCAGCCACCTGTCCTCATGCTGCACCCCCATCCCATTCCCTAGCTaGCCTGAAACAGGTGGGCCAGAGATGGGGCCAATCACTGAAGGG | + |
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Preference number: 1 (lower is better) Translates to: GSHLSSCCTPIPFPS*PETGGPEMGPITEG Trigger: CCCTTCAGTGATTGGCCCCATCTCTGGCCCACCTGTTTCAGGGCAGCTAGGGAATGGGATGGGGGTGCAGCATGAGGACAGGTGGCTGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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| 3UTR GCA 90 bp | ACAGGTGGGCCAGAGATGGGGCCAATCACTGAAGGGCGCTCTGGATaGTCTTGCAGCCCAGTTTCCTCCCATCCTCTCACCAGCTGCCAG | + |
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Preference number: 1 (lower is better) Translates to: TGGPEMGPITEGRSG*SCSPVSSHPLTSCQ Trigger: CTGGCAGCTGGTGAGAGGATGGGAGGAAACTGGGCTGCAAGAGCATCCAGAGCGCCCTTCAGTGATTGGCCCCATCTCTGGCCCACCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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| 3UTR GCA 90 bp | GGGCCAGAGATGGGGCCAATCACTGAAGGGCGCTCTGGATGCTCTTaGAGCCCAGTTTCCTCCCATCCTCTCACCAGCTGCCAGACATCT | + |
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Preference number: 1 (lower is better) Translates to: GPEMGPITEGRSGCS*SPVSSHPLTSCQTS Trigger: AGATGTCTGGCAGCTGGTGAGAGGATGGGAGGAAACTGGGCTGCAAGAGCATCCAGAGCGCCCTTCAGTGATTGGCCCCATCTCTGGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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| 3UTR TCA 90 bp | CCCCGCCATTTCCTATGCAGCACCTGTGGGGCTCCCAGGAAGGACTaGTTCAGGACCTTAGCTCAATGTTGGAACAGAGCACCTGGCCAG | + |
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Preference number: 1 (lower is better) Translates to: PRHFLCSTCGAPRKD*FRTLAQCWNRAPGQ Trigger: CTGGCCAGGTGCTCTGTTCCAACATTGAGCTAAGGTCCTGAATCAGTCCTTCCTGGGAGCCCCACAGGTGCTGCATAGGAAATGGCGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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| 3UTR GCA 90 bp | TCAATGTGCAATCTCATGAGGGTGGAAGGCAGCCACCTGTCCTCATaGTGCACCCCCATCCCATTCCCTAGCTGCCCTGAAACAGGTGGG | + |
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Preference number: 1 (lower is better) Translates to: SMCNLMRVEGSHLSS*CTPIPFPSCPETGG Trigger: CCCACCTGTTTCAGGGCAGCTAGGGAATGGGATGGGGGTGCAGCATGAGGACAGGTGGCTGCCTTCCACCCTCATGAGATTGCACATTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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| 3UTR GCA 90 bp | AGCGGTCAAGTAAGGCAAACCCAAAGCTGCCCAGGGTTTCCTAAGTaGCAGCCTCTCTGTGGTCTGGGGACAGCGAGGTTCTGTAACAGG | + |
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Preference number: 1 (lower is better) Translates to: SGQVRQTQSCPGFPK*QPLCGLGTARFCNR Trigger: CCTGTTACAGAACCTCGCTGTCCCCAGACCACAGAGAGGCTGGCACTTAGGAAACCCTGGGCAGCTTTGGGTTTGCCTTACTTGACCGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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| 3UTR GCA 90 bp | CATGGCTCTCCCAGTAGGCAGATTGGAGATAGTCCAAGGCAGACTTaGCCTGTTGGTGCAAGTGGGGCTGGGCTCACTAAAGGGCAAGAC | + |
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Preference number: 1 (lower is better) Translates to: HGSPSRQIGDSPRQT*PVGASGAGLTKGQD Trigger: GTCTTGCCCTTTAGTGAGCCCAGCCCCACTTGCACCAACAGGGCAAGTCTGCCTTGGACTATCTCCAATCTGCCTACTGGGAGAGCCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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| 3UTR CCA 90 bp | TGCCCTGTTGGTGCAAGTGGGGCTGGGCTCACTAAAGGGCAAGACTaGTCTGGCTTAAGACTTCCCTCTCTGCTCTCTTCCAGGGAAAGT | + |
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Preference number: 1 (lower is better) Translates to: CPVGASGAGLTKGQD*SGLRLPSLLSSRES Trigger: ACTTTCCCTGGAAGAGAGCAGAGAGGGAAGTCTTAAGCCAGACCAGTCTTGCCCTTTAGTGAGCCCAGCCCCACTTGCACCAACAGGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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| 3UTR CCA 90 bp | CTCTCTTCCAGGGAAAGTACTCCTCCCATCTGTCCTGGCATAGTATaGGTCCATGGCCAGTGTCCATGTCCCCAGAAAATGCCAGGTGAC | + |
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Preference number: 1 (lower is better) Translates to: LSSRESTPPICPGIV*VHGQCPCPQKMPGD Trigger: GTCACCTGGCATTTTCTGGGGACATGGACACTGGCCATGGACCCATACTATGCCAGGACAGATGGGAGGAGTACTTTCCCTGGAAGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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| 3UTR GCA 90 bp | TGGAAAGGCTGGAGAGTTAAATTCTGGAGGAAGTTCTCAGGATTCTaGCTGAGAGCAGTCACAGCAAGGGAGGAGGCAGGAGTAGAGAGA | + |
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Preference number: 1 (lower is better) Translates to: WKGWRVKFWRKFSGF*LRAVTAREEAGVER Trigger: TCTCTCTACTCCTGCCTCCTCCCTTGCTGTGACTGCTCTCAGGCAGAATCCTGAGAACTTCCTCCAGAATTTAACTCTCCAGCCTTTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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| 3UTR CCA 90 bp | GTCACTGAATATAAACAGGCTTGGAAAGGCTGGAGAGTTAAATTCTaGAGGAAGTTCTCAGGATTCTGCCTGAGAGCAGTCACAGCAAGG | + |
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Preference number: 1 (lower is better) Translates to: VTEYKQAWKGWRVKF*RKFSGFCLRAVTAR Trigger: CCTTGCTGTGACTGCTCTCAGGCAGAATCCTGAGAACTTCCTCCAGAATTTAACTCTCCAGCCTTTCCAAGCCTGTTTATATTCAGTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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| 3UTR CCA 90 bp | GAGGTCCAAAAGCCAGTCACTGAATATAAACAGGCTTGGAAAGGCTaGAGAGTTAAATTCTGGAGGAAGTTCTCAGGATTCTGCCTGAGA | + |
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Preference number: 1 (lower is better) Translates to: EVQKPVTEYKQAWKG*RVKFWRKFSGFCLR Trigger: TCTCAGGCAGAATCCTGAGAACTTCCTCCAGAATTTAACTCTCCAGCCTTTCCAAGCCTGTTTATATTCAGTGACTGGCTTTTGGACCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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| 3UTR CCA 90 bp | GAAAGCACAGAGGTCCAAAAGCCAGTCACTGAATATAAACAGGCTTaGAAAGGCTGGAGAGTTAAATTCTGGAGGAAGTTCTCAGGATTC | + |
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Preference number: 1 (lower is better) Translates to: ESTEVQKPVTEYKQA*KGWRVKFWRKFSGF Trigger: GAATCCTGAGAACTTCCTCCAGAATTTAACTCTCCAGCCTTTCCAAGCCTGTTTATATTCAGTGACTGGCTTTTGGACCTCTGTGCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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| 3UTR-3UTR CCA 90 bp | AAGTGCCAGCCTCTCTGTGGTCTGGGGACAGCGAGGTTCTGTAACAGGAGCACTGACAGGGGAGGGAGCTaGTGTCCTCGGGGATCTCCC | + |
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Preference number: 2 (lower is better) Translates to: KCQPLCGLGTARFCNRSTDRGGS*CPRGSP Trigger: GGGAGATCCCCGAGGACACCAGCTCCCTCCCCTGTC...AGTGCTCCTGTTACAGAACCTCGCTGTCCCCAGACCACAGAGAGGCTGGCACTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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| 3UTR-3UTR GCA 90 bp | GGTGTCCTCGGGGATCTCCCTCTGCTGAGACAGCTCTTGCCTAAGTATGAGAGTCCCCGCCATTTCCTATaGAGCACCTGTGGGGCTCCC | + |
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Preference number: 2 (lower is better) Translates to: GVLGDLPLLRQLLPKYESPRHFL*STCGAP Trigger: GGGAGCCCCACAGGTGCTGCATAGGAAATGGCGGGG...ACTCTCATACTTAGGCAAGAGCTGTCTCAGCAGAGGGAGATCCCCGAGGACACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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| 3UTR-3UTR GCA 90 bp | ACCGCAGGTTCAGAGGACCATGGCTCTCCCAGTAGGCAGATTGGAGATAGTCCAGACTTGCCCTGTTGGTaGAAGTGGGGCTGGGCTCAC | + |
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Preference number: 2 (lower is better) Translates to: TAGSEDHGSPSRQIGDSPDLPCW*KWGWAH Trigger: GTGAGCCCAGCCCCACTTGCACCAACAGGGCAAGTC...TGGACTATCTCCAATCTGCCTACTGGGAGAGCCATGGTCCTCTGAACCTGCGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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| 3UTR CAA 90 bp | CTCCCAGTAGGCAGATTGGAGATAGTCCAAGGCAGACTTGCCCTGTaGGTGCAAGTGGGGCTGGGCTCACTAAAGGGCAAGACTGGTCTG | + |
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Preference number: 2 (lower is better) Translates to: LPVGRLEIVQGRLAL*VQVGLGSLKGKTGL Trigger: CAGACCAGTCTTGCCCTTTAGTGAGCCCAGCCCCACTTGCACCAACAGGGCAAGTCTGCCTTGGACTATCTCCAATCTGCCTACTGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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| 3UTR-3UTR TCA 90 bp | TCTTCCAGGGAAAGTACTCCTCCCATCTGTCCTGGCATAGTATGGGTCCATGGCGATGGGGCCAATCACTaGAGGGCGCTCTGGATGCTC | + |
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Preference number: 2 (lower is better) Translates to: SSRESTPPICPGIVWVHGDGANH*RALWML Trigger: GAGCATCCAGAGCGCCCTTCAGTGATTGGCCCCATC...GCCATGGACCCATACTATGCCAGGACAGATGGGAGGAGTACTTTCCCTGGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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| 3UTR CAA 90 bp | GAGGGAGCTGGTGTCCTCGGGGATCTCCCTCTGCTGAGACAGCTCTaGCCTAAGTATGAGAGTCCCCTCAATGTGCAATCTCATGAGGGT | + |
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Preference number: 2 (lower is better) Translates to: EGAGVLGDLPLLRQL*PKYESPLNVQSHEG Trigger: ACCCTCATGAGATTGCACATTGAGGGGACTCTCATACTTAGGCAAGAGCTGTCTCAGCAGAGGGAGATCCCCGAGGACACCAGCTCCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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| 3UTR-3UTR GCA 90 bp | CCATGTCCCCAGAAAATGCCAGGTGACACAAAGACTTATAACAGCTGGGACCTCCCCCGCCATTTCCTATaGAGCACCTGTGGGGCTCCC | + |
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Preference number: 2 (lower is better) Translates to: PCPQKMPGDTKTYNSWDLPRHFL*STCGAP Trigger: GGGAGCCCCACAGGTGCTGCATAGGAAATGGCGGGG...GAGGTCCCAGCTGTTATAAGTCTTTGTGTCACCTGGCATTTTCTGGGGACATGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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| 3UTR-3UTR CCA 90 bp | TTGGGGAGCAGGACCCCATTCCTGCATCCTGAGCACCGCAGGTTCAGAGGACCACAGGCTTGGAAAGGCTaGAGAGTTAAATTCTGGAGG | + |
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Preference number: 2 (lower is better) Translates to: LGSRTPFLHPEHRRFRGPQAWKG*RVKFWR Trigger: CCTCCAGAATTTAACTCTCCAGCCTTTCCAAGCCTG...TGGTCCTCTGAACCTGCGGTGCTCAGGATGCAGGAATGGGGTCCTGCTCCCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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| 3UTR-3UTR GCA 90 bp | ACCGCAGGTTCAGAGGACCATGGCTCTCCCAGTAGGCAGATTGGAGATAGTCCAACAGCAAGCTCAACCTaGCTCAGCCAATCCACACAG | + |
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Preference number: 2 (lower is better) Translates to: TAGSEDHGSPSRQIGDSPTASST*LSQSTQ Trigger: CTGTGTGGATTGGCTGAGGCAGGTTGAGCTTGCTGT...TGGACTATCTCCAATCTGCCTACTGGGAGAGCCATGGTCCTCTGAACCTGCGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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| 3UTR-3UTR CCA 90 bp | AGCAAGCTCAACCTGCCTCAGCCAATCCACACAGGAGCCCCGCCATTTCCTATGTTGGAACAGAGCACCTaGCCAGTCTCTAGCTTTCCT | + |
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Preference number: 2 (lower is better) Translates to: SKLNLPQPIHTGAPPFPMLEQST*PVSSFP Trigger: AGGAAAGCTAGAGACTGGCCAGGTGCTCTGTTCCAA...CATAGGAAATGGCGGGGCTCCTGTGTGGATTGGCTGAGGCAGGTTGAGCTTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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| 3UTR-3UTR CCA 90 bp | AGCAAGCTCAACCTGCCTCAGCCAATCCACACAGGAGCCCCGCCATTTCCTATGACCTTAGCTCAATGTTaGAACAGAGCACCTGGCCAG | + |
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Preference number: 2 (lower is better) Translates to: SKLNLPQPIHTGAPPFPMTLAQC*NRAPGQ Trigger: CTGGCCAGGTGCTCTGTTCCAACATTGAGCTAAGGT...CATAGGAAATGGCGGGGCTCCTGTGTGGATTGGCTGAGGCAGGTTGAGCTTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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| 3UTR-3UTR GCA 90 bp | TCTTCCAGGGAAAGTACTCCTCCCATCTGTCCTGGCATAGTATGGGTCCATGGCACAGCAAGCTCAACCTaGCTCAGCCAATCCACACAG | + |
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Preference number: 2 (lower is better) Translates to: SSRESTPPICPGIVWVHGTASST*LSQSTQ Trigger: CTGTGTGGATTGGCTGAGGCAGGTTGAGCTTGCTGT...GCCATGGACCCATACTATGCCAGGACAGATGGGAGGAGTACTTTCCCTGGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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| 3UTR-3UTR GCA 90 bp | TCTTCCAGGGAAAGTACTCCTCCCATCTGTCCTGGCATAGTATGGGTCCATGGCAGGCAAACCCAAAGCTaGCCAGGGTTTCCTAAGTGC | + |
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Preference number: 2 (lower is better) Translates to: SSRESTPPICPGIVWVHGRQTQS*PGFPKC Trigger: GCACTTAGGAAACCCTGGGCAGCTTTGGGTTTGCCT...GCCATGGACCCATACTATGCCAGGACAGATGGGAGGAGTACTTTCCCTGGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGTTAAATTCTGGAGGAAGTTCTCAGGATTCTGCCTGAGAGCAGTCACAGCAGGTGGGGGTAGGGGGTaGGAGCAGCGGTCAAGTAAG | + |
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Preference number: 2 (lower is better) Translates to: RVKFWRKFSGFCLRAVTAGGGRG*EQRSSK Trigger: CTTACTTGACCGCTGCTCCCACCCCCTACCCCCACC...TGCTGTGACTGCTCTCAGGCAGAATCCTGAGAACTTCCTCCAGAATTTAACTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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| 3UTR-3UTR TCA 90 bp | CCATGTCCCCAGAAAATGCCAGGTGACACAAAGACTTATAACAGCTGGGACCTCTCTCAGGATTCTGCCTaGGAGCAGTCACAGCAAGGG | + |
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Preference number: 2 (lower is better) Translates to: PCPQKMPGDTKTYNSWDLSQDSA*EQSQQG Trigger: CCCTTGCTGTGACTGCTCTCAGGCAGAATCCTGAGA...GAGGTCCCAGCTGTTATAAGTCTTTGTGTCACCTGGCATTTTCTGGGGACATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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| 3UTR-3UTR CCA 90 bp | TTCCAGGGAAAGTACTCCTCCCATCTGTCCTGGCATAGTATGGGTCCATGGCCATTGGAACAGAGCACCTaGCCAGTCTCTAGCTTTCCT | + |
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Preference number: 2 (lower is better) Translates to: FQGKYSSHLSWHSMGPWPLEQST*PVSSFP Trigger: AGGAAAGCTAGAGACTGGCCAGGTGCTCTGTTCCAA...TGGCCATGGACCCATACTATGCCAGGACAGATGGGAGGAGTACTTTCCCTGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGAAGTAGAAAACAAACACAATTTCCATGATGCAGCTGCCACACAGCCAAGAGACAGGGGAGGGAGCTaGTGTCCTCGGGGATCTCCC | + |
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Preference number: 2 (lower is better) Translates to: SEVENKHNFHDAAATQPRDRGGS*CPRGSP Trigger: GGGAGATCCCCGAGGACACCAGCTCCCTCCCCTGTC...TCTTGGCTGTGTGGCAGCTGCATCATGGAAATTGTGTTTGTTTTCTACTTCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGTTAAATTCTGGAGGAAGTTCTCAGGATTCTGCCTGAGAGCAGTCACAGCAGTGCCAGCCTCTCTGTaGTCTGGGGACAGCGAGGTT | + |
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Preference number: 2 (lower is better) Translates to: RVKFWRKFSGFCLRAVTAVPASL*SGDSEV Trigger: AACCTCGCTGTCCCCAGACCACAGAGAGGCTGGCAC...TGCTGTGACTGCTCTCAGGCAGAATCCTGAGAACTTCCTCCAGAATTTAACTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGCACAGAGGTCCAAAAGCCAGTCACTGAATATAAACAGGCTTGGAAAGGCTGGTGGGGGTAGGGGGTaGGAGCAGCGGTCAAGTAAG | + |
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Preference number: 2 (lower is better) Translates to: KAQRSKSQSLNINRLGKAGGGRG*EQRSSK Trigger: CTTACTTGACCGCTGCTCCCACCCCCTACCCCCACC...AGCCTTTCCAAGCCTGTTTATATTCAGTGACTGGCTTTTGGACCTCTGTGCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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| 3UTR-3UTR GCA 90 bp | ACCGCAGGTTCAGAGGACCATGGCTCTCCCAGTAGGCAGATTGGAGATAGTCCACATGTCCCCAGAAAATaGCAGGTGACACAAAGACTT | + |
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Preference number: 2 (lower is better) Translates to: TAGSEDHGSPSRQIGDSPHVPRK*QVTQRL Trigger: AAGTCTTTGTGTCACCTGGCATTTTCTGGGGACATG...TGGACTATCTCCAATCTGCCTACTGGGAGAGCCATGGTCCTCTGAACCTGCGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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| 3UTR-3UTR CCA 90 bp | TTGGGGAGCAGGACCCCATTCCTGCATCCTGAGCACCGCAGGTTCAGAGGACCAGAATATAAACAGGCTTaGAAAGGCTGGAGAGTTAAA | + |
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Preference number: 2 (lower is better) Translates to: LGSRTPFLHPEHRRFRGPEYKQA*KGWRVK Trigger: TTTAACTCTCCAGCCTTTCCAAGCCTGTTTATATTC...TGGTCCTCTGAACCTGCGGTGCTCAGGATGCAGGAATGGGGTCCTGCTCCCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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| 3UTR-3UTR CCA 90 bp | TTGGTTAACCACAGCACACCAGGTAGGAACAACACGCAGCAAACAGGAGGCAGGACTAAAGGGCAAGACTaGTCTGGCTTAAGACTTCCC | + |
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Preference number: 2 (lower is better) Translates to: LVNHSTPGRNNTQQTGGRTKGQD*SGLRLP Trigger: GGGAAGTCTTAAGCCAGACCAGTCTTGCCCTTTAGT...CCTGCCTCCTGTTTGCTGCGTGTTGTTCCTACCTGGTGTGCTGTGGTTAACCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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| 3UTR-3UTR GCA 90 bp | AAAGCACAGAGGTCCAAAAGCCAGTCACTGAATATAAACAGGCTTGGAAAGGCTAGCCACCTGTCCTCATaGTGCACCCCCATCCCATTC | + |
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Preference number: 2 (lower is better) Translates to: KAQRSKSQSLNINRLGKASHLSS*CTPIPF Trigger: GAATGGGATGGGGGTGCAGCATGAGGACAGGTGGCT...AGCCTTTCCAAGCCTGTTTATATTCAGTGACTGGCTTTTGGACCTCTGTGCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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| 3UTR-3UTR GCA 90 bp | TCTTCCAGGGAAAGTACTCCTCCCATCTGTCCTGGCATAGTATGGGTCCATGGCCATGTCCCCAGAAAATaGCAGGTGACACAAAGACTT | + |
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Preference number: 2 (lower is better) Translates to: SSRESTPPICPGIVWVHGHVPRK*QVTQRL Trigger: AAGTCTTTGTGTCACCTGGCATTTTCTGGGGACATG...GCCATGGACCCATACTATGCCAGGACAGATGGGAGGAGTACTTTCCCTGGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGAAGTAGAAAACAAACACAATTTCCATGATGCAGCTGCCACACAGCCAAGACCTATGCAGCACCTGTaGGGCTCCCAGGAAGGACTG | + |
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Preference number: 2 (lower is better) Translates to: SEVENKHNFHDAAATQPRPMQHL*GSQEGL Trigger: CAGTCCTTCCTGGGAGCCCCACAGGTGCTGCATAGG...TCTTGGCTGTGTGGCAGCTGCATCATGGAAATTGTGTTTGTTTTCTACTTCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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| 3UTR-3UTR GCA 90 bp | CCATGTCCCCAGAAAATGCCAGGTGACACAAAGACTTATAACAGCTGGGACCTCAAGTTCTCAGGATTCTaGCTGAGAGCAGTCACAGCA | + |
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Preference number: 2 (lower is better) Translates to: PCPQKMPGDTKTYNSWDLKFSGF*LRAVTA Trigger: TGCTGTGACTGCTCTCAGGCAGAATCCTGAGAACTT...GAGGTCCCAGCTGTTATAAGTCTTTGTGTCACCTGGCATTTTCTGGGGACATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGTTAAATTCTGGAGGAAGTTCTCAGGATTCTGCCTGAGAGCAGTCACAGCAACCTTAGCTCAATGTTaGAACAGAGCACCTGGCCAG | + |
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Preference number: 2 (lower is better) Translates to: RVKFWRKFSGFCLRAVTATLAQC*NRAPGQ Trigger: CTGGCCAGGTGCTCTGTTCCAACATTGAGCTAAGGT...TGCTGTGACTGCTCTCAGGCAGAATCCTGAGAACTTCCTCCAGAATTTAACTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTCCAGGGAAAGTACTCCTCCCATCTGTCCTGGCATAGTATGGGTCCATGGCTGGAGAGTTAAATTCTaGAGGAAGTTCTCAGGATTC | + |
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Preference number: 2 (lower is better) Translates to: SSRESTPPICPGIVWVHGWRVKF*RKFSGF Trigger: GAATCCTGAGAACTTCCTCCAGAATTTAACTCTCCA...GCCATGGACCCATACTATGCCAGGACAGATGGGAGGAGTACTTTCCCTGGAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGAAGTAGAAAACAAACACAATTTCCATGATGCAGCTGCCACACAGCCAAGACAGGCTTGGAAAGGCTaGAGAGTTAAATTCTGGAGG | + |
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Preference number: 2 (lower is better) Translates to: SEVENKHNFHDAAATQPRQAWKG*RVKFWR Trigger: CCTCCAGAATTTAACTCTCCAGCCTTTCCAAGCCTG...TCTTGGCTGTGTGGCAGCTGCATCATGGAAATTGTGTTTGTTTTCTACTTCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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| 3UTR TCA 72 bp | GGCAGGGTTGGGGAGCAGGACCCCATTCCTGCATCCTaGGCACCGCAGGTTCAGAGGACCATGGCTCTCCCA | + |
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Preference number: 3 (lower is better) Translates to: GRVGEQDPIPAS*APQVQRTMALP Trigger: TGGGAGAGCCATGGTCCTCTGAACCTGCGGTGCTCAGGATGCAGGAATGGGGTCCTGCTCCCCAACCCTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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| 3UTR GCA 72 bp | ATGGGGCCAATCACTGAAGGGCGCTCTGGATGCTCTTaGAGCCCAGTTTCCTCCCATCCTCTCACCAGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: MGPITEGRSGCS*SPVSSHPLTSC Trigger: GCAGCTGGTGAGAGGATGGGAGGAAACTGGGCTGCAAGAGCATCCAGAGCGCCCTTCAGTGATTGGCCCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
||
| 3UTR GCA 72 bp | CCAGAGATGGGGCCAATCACTGAAGGGCGCTCTGGATaGTCTTGCAGCCCAGTTTCCTCCCATCCTCTCACC | + |
|
Preference number: 3 (lower is better) Translates to: PEMGPITEGRSG*SCSPVSSHPLT Trigger: GGTGAGAGGATGGGAGGAAACTGGGCTGCAAGAGCATCCAGAGCGCCCTTCAGTGATTGGCCCCATCTCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
||
| 3UTR CCA 72 bp | CACACAGGAGCCCCGCCATTTCCTATGCAGCACCTGTaGGGCTCCCAGGAAGGACTGATTCAGGACCTTAGC | + |
|
Preference number: 3 (lower is better) Translates to: HTGAPPFPMQHL*GSQEGLIQDLS Trigger: GCTAAGGTCCTGAATCAGTCCTTCCTGGGAGCCCCACAGGTGCTGCATAGGAAATGGCGGGGCTCCTGTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGTGCCAGCCTCTCTGTGGTCTGGGGACAGCGAGGTTCTGTAACAGGAGCACTGCGCTCTGGATGCTCTaGCAGCCCAGTTTCCTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: KCQPLCGLGTARFCNRSTALWML*QPSFLP Trigger: TGGGAGGAAACTGGGCTGCAAGAGCATCCAGAGCGC...AGTGCTCCTGTTACAGAACCTCGCTGTCCCCAGACCACAGAGAGGCTGGCACTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
||
| 3UTR-3UTR CAA 90 bp | AGACTTCCCTCTCTGCTCTCTTCCAGGGAAAGTACTCCTCCCATCTGTCCTGGCGCGCTCTGGATGCTCTaGCAGCCCAGTTTCCTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: RLPSLLSSRESTPPICPGALWML*QPSFLP Trigger: TGGGAGGAAACTGGGCTGCAAGAGCATCCAGAGCGC...GCCAGGACAGATGGGAGGAGTACTTTCCCTGGAAGAGAGCAGAGAGGGAAGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGGGGAGCAGGACCCCATTCCTGCATCCTGAGCACCGCAGGTTCAGAGGACCACTCCCAGTAGGCAGATaGGAGATAGTCCAAGGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: LGSRTPFLHPEHRRFRGPLPVGR*EIVQGR Trigger: TCTGCCTTGGACTATCTCCAATCTGCCTACTGGGAG...TGGTCCTCTGAACCTGCGGTGCTCAGGATGCAGGAATGGGGTCCTGCTCCCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
||
| 3UTR GCA 72 bp | GTAAGGCAAACCCAAAGCTGCCCAGGGTTTCCTAAGTaGCAGCCTCTCTGTGGTCTGGGGACAGCGAGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: VRQTQSCPGFPK*QPLCGLGTARF Trigger: GAACCTCGCTGTCCCCAGACCACAGAGAGGCTGGCACTTAGGAAACCCTGGGCAGCTTTGGGTTTGCCTTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
||
| 3UTR GCA 72 bp | GGTGGGAGCAGCGGTCAAGTAAGGCAAACCCAAAGCTaGCCAGGGTTTCCTAAGTGCCAGCCTCTCTGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: GGSSGQVRQTQS*PGFPKCQPLCG Trigger: ACCACAGAGAGGCTGGCACTTAGGAAACCCTGGGCAGCTTTGGGTTTGCCTTACTTGACCGCTGCTCCCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
||
| 3UTR CCA 72 bp | GGTGCAAGTGGGGCTGGGCTCACTAAAGGGCAAGACTaGTCTGGCTTAAGACTTCCCTCTCTGCTCTCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: GASGAGLTKGQD*SGLRLPSLLSS Trigger: GGAAGAGAGCAGAGAGGGAAGTCTTAAGCCAGACCAGTCTTGCCCTTTAGTGAGCCCAGCCCCACTTGCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
||
| 3UTR TCA 72 bp | AACCAAAAACAGGTGTGGTCACCCACCTGCCTCAGGTaGGCTTTAGTGAGTGTGGGCGGTGATGGCGATGGT | + |
|
Preference number: 3 (lower is better) Translates to: NQKQVWSPTCLR*ALVSVGGDGDG Trigger: ACCATCGCCATCACCGCCCACACTCACTAAAGCTCACCTGAGGCAGGTGGGTGACCACACCTGTTTTTGGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
||
| 3UTR GCA 72 bp | CCCAGTAGGCAGATTGGAGATAGTCCAAGGCAGACTTaGCCTGTTGGTGCAAGTGGGGCTGGGCTCACTAAA | + |
|
Preference number: 3 (lower is better) Translates to: PSRQIGDSPRQT*PVGASGAGLTK Trigger: TTTAGTGAGCCCAGCCCCACTTGCACCAACAGGGCAAGTCTGCCTTGGACTATCTCCAATCTGCCTACTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
||
| 3UTR CCA 72 bp | GCTCTCTTCCAGGGAAAGTACTCCTCCCATCTGTCCTaGCATAGTATGGGTCCATGGCCAGTGTCCATGTCC | + |
|
Preference number: 3 (lower is better) Translates to: ALFQGKYSSHLS*HSMGPWPVSMS Trigger: GGACATGGACACTGGCCATGGACCCATACTATGCCAGGACAGATGGGAGGAGTACTTTCCCTGGAAGAGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
||
| 3UTR GCA 72 bp | GACAGCTCTTGCCTAAGTATGAGAGTCCCCTCAATGTaGAATCTCATGAGGGTGGAAGGCAGCCACCTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: DSSCLSMRVPSM*NLMRVEGSHLS Trigger: GGACAGGTGGCTGCCTTCCACCCTCATGAGATTGCACATTGAGGGGACTCTCATACTTAGGCAAGAGCTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
||
| 3UTR TCA 72 bp | TTCCTATGCAGCACCTGTGGGGCTCCCAGGAAGGACTaGTTCAGGACCTTAGCTCAATGTTGGAACAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: FLCSTCGAPRKD*FRTLAQCWNRA Trigger: TGCTCTGTTCCAACATTGAGCTAAGGTCCTGAATCAGTCCTTCCTGGGAGCCCCACAGGTGCTGCATAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
||
| 3UTR CCA 72 bp | AGGGAAAGTACTCCTCCCATCTGTCCTGGCATAGTATaGGTCCATGGCCAGTGTCCATGTCCCCAGAAAATG | + |
|
Preference number: 3 (lower is better) Translates to: RESTPPICPGIV*VHGQCPCPQKM Trigger: CATTTTCTGGGGACATGGACACTGGCCATGGACCCATACTATGCCAGGACAGATGGGAGGAGTACTTTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
||
| 3UTR GCA 72 bp | TATGGGTCCATGGCCAGTGTCCATGTCCCCAGAAAATaGCAGGTGACACAAAGACTTATAACAGCTGGGACC | + |
|
Preference number: 3 (lower is better) Translates to: YGSMASVHVPRK*QVTQRLITAGT Trigger: GGTCCCAGCTGTTATAAGTCTTTGTGTCACCTGGCATTTTCTGGGGACATGGACACTGGCCATGGACCCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
||
| 3UTR CCA 72 bp | TCTTTAGGAACCTATTACCCCTTTAAGAAGGCTCTCTaGGGCGCTCTGTCAGAGAGCCCAGAGCTGGATCTA | + |
|
Preference number: 3 (lower is better) Translates to: SLGTYYPFKKAL*GALSESPELDL Trigger: TAGATCCAGCTCTGGGCTCTCTGACAGAGCGCCCCAGAGAGCCTTCTTAAAGGGGTAATAGGTTCCTAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
||
| 3UTR CCA 72 bp | ATCCTCTCACCAGCTGCCAGACATCTCTCTGGAGACTaGAGACCAACAGGCTTCTTTAGGAACCTATTACCC | + |
|
Preference number: 3 (lower is better) Translates to: ILSPAARHLSGD*RPTGFFRNLLP Trigger: GGGTAATAGGTTCCTAAAGAAGCCTGTTGGTCTCCAGTCTCCAGAGAGATGTCTGGCAGCTGGTGAGAGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
||
| 3UTR CCA 72 bp | CAGAAAATGCCAGGTGACACAAAGACTTATAACAGCTaGGACCTCAAGGAGCTCCTGAAAGCACAGAGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: QKMPGDTKTYNS*DLKELLKAQRS Trigger: GGACCTCTGTGCTTTCAGGAGCTCCTTGAGGTCCCAGCTGTTATAAGTCTTTGTGTCACCTGGCATTTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAGTTAAATTCTGGAGGAAGTTCTCAGGATTCTGCCTGAGAGCAGTCACAGCAGGTATATTCCCCAGGTaGATGAGAACACAGCAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: RVKFWRKFSGFCLRAVTAGIFPR*MRTQQA Trigger: AGCTTGCTGTGTTCTCATCAACCTGGGGAATATACC...TGCTGTGACTGCTCTCAGGCAGAATCCTGAGAACTTCCTCCAGAATTTAACTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
||
| 3UTR-3UTR CAA 90 bp | TCAGAAGTAGAAAACAAACACAATTTCCATGATGCAGCTGCCACACAGCCAAGACTCCCAGTAGGCAGATaGGAGATAGTCCAAGGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: SEVENKHNFHDAAATQPRLPVGR*EIVQGR Trigger: TCTGCCTTGGACTATCTCCAATCTGCCTACTGGGAG...TCTTGGCTGTGTGGCAGCTGCATCATGGAAATTGTGTTTGTTTTCTACTTCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
||
| 3UTR CCA 72 bp | TATAAACAGGCTTGGAAAGGCTGGAGAGTTAAATTCTaGAGGAAGTTCTCAGGATTCTGCCTGAGAGCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: YKQAWKGWRVKF*RKFSGFCLRAV Trigger: GACTGCTCTCAGGCAGAATCCTGAGAACTTCCTCCAGAATTTAACTCTCCAGCCTTTCCAAGCCTGTTTATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
||
| CDS-3UTR GCA 90 bp | TTGGGGAGCAGGACCCCATTCCTGCATCCTGAGCACCGCAGGTTCAGAGGACCACCCGGCCTGGGCCGGTaGAGGTGGCTCCGTGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LGSRTPFLHPEHRRFRGPPGLGR*RWLRAE Trigger: TTCAGCACGGAGCCACCTGCACCGGCCCAGGCCGGG...TGGTCCTCTGAACCTGCGGTGCTCAGGATGCAGGAATGGGGTCCTGCTCCCCAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238917.2 |
||
| CDS-3UTR CCA 90 bp | TTGGGGAGCAGGACCCCATTCCTGCATCCTGAGCACCGCAGGTTCAGAGGACCATTCCCTCTGGGCTGCTaGCTCCAGGCACAGCGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LGSRTPFLHPEHRRFRGPFPLGC*LQAQRP Trigger: AGGCCGCTGTGCCTGGAGCCAGCAGCCCAGAGGGAA...TGGTCCTCTGAACCTGCGGTGCTCAGGATGCAGGAATGGGGTCCTGCTCCCCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
||
| CDS-3UTR GCA 90 bp | GCCCTGAAACAGGTGGGCCAGAGATGGGGCCAATCACTGAAGGGCGCTCTGGATAGCCTCAGCAGCTCCTaGTGTCCGGACAGGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ALKQVGQRWGQSLKGALDSLSSS*CPDRLS Trigger: GCTGAGCCTGTCCGGACAGCAGGAGCTGCTGAGGCT...ATCCAGAGCGCCCTTCAGTGATTGGCCCCATCTCTGGCCCACCTGTTTCAGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
||
| CDS-3UTR CCA 90 bp | GGTGTCCTCGGGGATCTCCCTCTGCTGAGACAGCTCTTGCCTAAGTATGAGAGTGAGGTCTGTGGGTCCTaGGGAGTGGAGCCACGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GVLGDLPLLRQLLPKYESEVCGS*GVEPRG Trigger: GCCCCGTGGCTCCACTCCCCAGGACCCACAGACCTC...ACTCTCATACTTAGGCAAGAGCTGTCTCAGCAGAGGGAGATCCCCGAGGACACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
||
| CDS-3UTR TCA 90 bp | AGACTTCCCTCTCTGCTCTCTTCCAGGGAAAGTACTCCTCCCATCTGTCCTGGCGCGGTGTTAGGAATCTaGGGGCTGTGGGCAGCCGCG | + |
|
Preference number: 4 (lower is better) Translates to: RLPSLLSSRESTPPICPGAVLGI*GLWAAA Trigger: CGCGGCTGCCCACAGCCCTCAGATTCCTAACACCGC...GCCAGGACAGATGGGAGGAGTACTTTCCCTGGAAGAGAGCAGAGAGGGAAGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
||
| CDS-3UTR TCA 90 bp | TTCCAGGGAAAGTACTCCTCCCATCTGTCCTGGCATAGTATGGGTCCATGGCCAGCGGTGTTAGGAATCTaGGGGCTGTGGGCAGCCGCG | + |
|
Preference number: 4 (lower is better) Translates to: FQGKYSSHLSWHSMGPWPAVLGI*GLWAAA Trigger: CGCGGCTGCCCACAGCCCTCAGATTCCTAACACCGC...TGGCCATGGACCCATACTATGCCAGGACAGATGGGAGGAGTACTTTCCCTGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
||
| CDS-3UTR GCA 90 bp | TCTTCCAGGGAAAGTACTCCTCCCATCTGTCCTGGCATAGTATGGGTCCATGGCGCCACGGGGCTCCAGTaGAGTTCCCTCTGGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSRESTPPICPGIVWVHGATGLQ*SSLWAA Trigger: AGCAGCCCAGAGGGAACTGCACTGGAGCCCCGTGGC...GCCATGGACCCATACTATGCCAGGACAGATGGGAGGAGTACTTTCCCTGGAAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
||
| CDS-3UTR CCA 90 bp | TTGGTTAACCACAGCACACCAGGTAGGAACAACACGCAGCAAACAGGAGGCAGGTTCCCTCTGGGCTGCTaGCTCCAGGCACAGCGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LVNHSTPGRNNTQQTGGRFPLGC*LQAQRP Trigger: AGGCCGCTGTGCCTGGAGCCAGCAGCCCAGAGGGAA...CCTGCCTCCTGTTTGCTGCGTGTTGTTCCTACCTGGTGTGCTGTGGTTAACCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
||
| CDS-3UTR CCA 90 bp | GGTGTCCTCGGGGATCTCCCTCTGCTGAGACAGCTCTTGCCTAAGTATGAGAGTCAGTGCAGTTCCCTCTaGGCTGCTGGCTCCAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GVLGDLPLLRQLLPKYESQCSSL*AAGSRH Trigger: GTGCCTGGAGCCAGCAGCCCAGAGGGAACTGCACTG...ACTCTCATACTTAGGCAAGAGCTGTCTCAGCAGAGGGAGATCCCCGAGGACACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
||
| CDS-3UTR CCA 90 bp | AGGACCATGGCTCTCCCAGTAGGCAGATTGGAGATAGTCCAAGGCAGACTTGCCCAGTGCAGTTCCCTCTaGGCTGCTGGCTCCAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RTMALPVGRLEIVQGRLAQCSSL*AAGSRH Trigger: GTGCCTGGAGCCAGCAGCCCAGAGGGAACTGCACTG...GGCAAGTCTGCCTTGGACTATCTCCAATCTGCCTACTGGGAGAGCCATGGTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
||
| CDS-3UTR TCA 90 bp | CTGGATGCTCTTGCAGCCCAGTTTCCTCCCATCCTCTCACCAGCTGCCAGACATACTGGTAGATCTGGCTaGGCGTCAACCTGCGTAGCG | + |
|
Preference number: 4 (lower is better) Translates to: LDALAAQFPPILSPAARHTGRSG*ASTCVA Trigger: CGCTACGCAGGTTGACGCTCAGCCAGATCTACCAGT...ATGTCTGGCAGCTGGTGAGAGGATGGGAGGAAACTGGGCTGCAAGAGCATCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
||
| 3UTR CAA 72 bp | GGCAGATTGGAGATAGTCCAAGGCAGACTTGCCCTGTaGGTGCAAGTGGGGCTGGGCTCACTAAAGGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: GRLEIVQGRLAL*VQVGLGSLKGK Trigger: CTTGCCCTTTAGTGAGCCCAGCCCCACTTGCACCAACAGGGCAAGTCTGCCTTGGACTATCTCCAATCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
||
| CDS-3UTR CCA 90 bp | AGACTTCCCTCTCTGCTCTCTTCCAGGGAAAGTACTCCTCCCATCTGTCCTGGCCGCAAAGAAAAGTCATaGGCCAGACCATCAGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RLPSLLSSRESTPPICPGRKEKS*ARPSGR Trigger: CCTCCCTGATGGTCTGGCCCATGACTTTTCTTTGCG...GCCAGGACAGATGGGAGGAGTACTTTCCCTGGAAGAGAGCAGAGAGGGAAGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
||
| 3UTR CAA 72 bp | GGTGTCCTCGGGGATCTCCCTCTGCTGAGACAGCTCTaGCCTAAGTATGAGAGTCCCCTCAATGTGCAATCT | + |
|
Preference number: 4 (lower is better) Translates to: GVLGDLPLLRQL*PKYESPLNVQS Trigger: AGATTGCACATTGAGGGGACTCTCATACTTAGGCAAGAGCTGTCTCAGCAGAGGGAGATCCCCGAGGACACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
||
| CDS-3UTR GCA 90 bp | AAAGCACAGAGGTCCAAAAGCCAGTCACTGAATATAAACAGGCTTGGAAAGGCTAGCCTCAGCAGCTCCTaGTGTCCGGACAGGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KAQRSKSQSLNINRLGKASLSSS*CPDRLS Trigger: GCTGAGCCTGTCCGGACAGCAGGAGCTGCTGAGGCT...AGCCTTTCCAAGCCTGTTTATATTCAGTGACTGGCTTTTGGACCTCTGTGCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
||
| CDS-3UTR GCA 90 bp | CTGGATGCTCTTGCAGCCCAGTTTCCTCCCATCCTCTCACCAGCTGCCAGACATCCAGCGTCCAATAATTaGCTTTTCCTGGATCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LDALAAQFPPILSPAARHPASNN*LFLDRS Trigger: AGAACGATCCAGGAAAAGGCAATTATTGGACGCTGG...ATGTCTGGCAGCTGGTGAGAGGATGGGAGGAAACTGGGCTGCAAGAGCATCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
||
| 3UTR CAA 72 bp | TCCCAGGAAGGACTGATTCAGGACCTTAGCTCAATGTaGGAACAGAGCACCTGGCCAGTCTCTAGCTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SQEGLIQDLSSM*EQSTWPVSSFP Trigger: AGGAAAGCTAGAGACTGGCCAGGTGCTCTGTTCCAACATTGAGCTAAGGTCCTGAATCAGTCCTTCCTGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
||
| CDS-3UTR GCA 90 bp | TCTTCCAGGGAAAGTACTCCTCCCATCTGTCCTGGCATAGTATGGGTCCATGGCCCAGCGTCCAATAATTaGCTTTTCCTGGATCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSRESTPPICPGIVWVHGPASNN*LFLDRS Trigger: AGAACGATCCAGGAAAAGGCAATTATTGGACGCTGG...GCCATGGACCCATACTATGCCAGGACAGATGGGAGGAGTACTTTCCCTGGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
||
| CDS-3UTR TCA 90 bp | ACTGAATATAAACAGGCTTGGAAAGGCTGGAGAGTTAAATTCTGGAGGAAGTTCACTGGTAGATCTGGCTaGGCGTCAACCTGCGTAGCG | + |
|
Preference number: 4 (lower is better) Translates to: TEYKQAWKGWRVKFWRKFTGRSG*ASTCVA Trigger: CGCTACGCAGGTTGACGCTCAGCCAGATCTACCAGT...GAACTTCCTCCAGAATTTAACTCTCCAGCCTTTCCAAGCCTGTTTATATTCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
||
| CDS-3UTR CCA 90 bp | TCAGAAGTAGAAAACAAACACAATTTCCATGATGCAGCTGCCACACAGCCAAGACGCAAAGAAAAGTCATaGGCCAGACCATCAGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SEVENKHNFHDAAATQPRRKEKS*ARPSGR Trigger: CCTCCCTGATGGTCTGGCCCATGACTTTTCTTTGCG...TCTTGGCTGTGTGGCAGCTGCATCATGGAAATTGTGTTTGTTTTCTACTTCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
||
| 3UTR CAA 72 bp | TTACATTTGGAAAGAGAGTATGGGTTGACTGTAAGCTaGGTTAACCACAGCACACCAGGTAGGAACAACACG | + |
|
Preference number: 4 (lower is better) Translates to: LHLEREYGLTVS*VNHSTPGRNNT Trigger: CGTGTTGTTCCTACCTGGTGTGCTGTGGTTAACCAAGCTTACAGTCAACCCATACTCTCTTTCCAAATGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
||
| CDS CCA 90 bp | ACCCGGGACGGCGAGAGTCGCTGCAGCGTAGGATGGAGCCGGCCCTaGTCCCGTCGCGTAGGGCGCCGGGCTGAGCGCGGCCGAGTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: TRDGESRCSVGWSRP*SRRVGRRAERGRVH Trigger: GTGAACTCGGCCGCGCTCAGCCCGGCGCCCTACGCGACGGGACCAGGGCCGGCTCCATCCTACGCTGCAGCGACTCTCGCCGTCCCGGGT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
||
| CDS TCA 90 bp | CGTAGGATGGAGCCGGCCCTGGTCCCGTCGCGTAGGGCGCCGGGCTaGGCGCGGCCGAGTTCACCCACAGGCGCCGGCCAGAGCTCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: RRMEPALVPSRRAPG*ARPSSPTGAGQSSD Trigger: ATCTGAGCTCTGGCCGGCGCCTGTGGGTGAACTCGGCCGCGCTCAGCCCGGCGCCCTACGCGACGGGACCAGGGCCGGCTCCATCCTACG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
||
| CDS CCA 90 bp | GCCAAGAAGCGAACCCGGGACGGCGAGAGTCGCTGCAGCGTAGGATaGAGCCGGCCCTGGTCCCGTCGCGTAGGGCGCCGGGCTGAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: AKKRTRDGESRCSVG*SRPWSRRVGRRAER Trigger: GCGCTCAGCCCGGCGCCCTACGCGACGGGACCAGGGCCGGCTCCATCCTACGCTGCAGCGACTCTCGCCGTCCCGGGTTCGCTTCTTGGC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
||
| CDS TCA 90 bp | TCCGGACAGGCTCAGCCAAGCGAGATCAGCGCCTGCCAGACCGCCTaGAGCGCCAAGAAGCGAACCCGGGACGGCGAGAGTCGCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SGQAQPSEISACQTA*SAKKRTRDGESRCS Trigger: GCTGCAGCGACTCTCGCCGTCCCGGGTTCGCTTCTTGGCGCTTCAGGCGGTCTGGCAGGCGCTGATCTCGCTTGGCTGAGCCTGTCCGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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| CDS CCA 90 bp | TGGGTCCTGGGGAGTGGAGCCACGGGGCTCCAGTGCAGTTCCCTCTaGGCTGCTGGCTCCAGGCACAGCGGCCTCGCTAGTCTCTCCTCT | + |
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Preference number: 5 (lower is better) Translates to: WVLGSGATGLQCSSL*AAGSRHSGLASLSS Trigger: AGAGGAGAGACTAGCGAGGCCGCTGTGCCTGGAGCCAGCAGCCCAGAGGGAACTGCACTGGAGCCCCGTGGCTCCACTCCCCAGGACCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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| CDS CCA 90 bp | CTGTGGGCAGCCGCGGTTGGTGGTGGCCTTCGCAAAGAAAAGTCATaGGCCAGACCATCAGGGAGGGCGCCAAAGCCGCCGGCCAGGGCT | + |
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Preference number: 5 (lower is better) Translates to: LWAAAVGGGLRKEKS*ARPSGRAPKPPARA Trigger: AGCCCTGGCCGGCGGCTTTGGCGCCCTCCCTGATGGTCTGGCCCATGACTTTTCTTTGCGAAGGCCACCACCAACCGCGGCTGCCCACAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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| CDS CCA 90 bp | CGCGGTGTTAGGAATCTGAGGGCTGTGGGCAGCCGCGGTTGGTGGTaGCCTTCGCAAAGAAAAGTCATGGGCCAGACCATCAGGGAGGGC | + |
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Preference number: 5 (lower is better) Translates to: RGVRNLRAVGSRGWW*PSQRKVMGQTIREG Trigger: GCCCTCCCTGATGGTCTGGCCCATGACTTTTCTTTGCGAAGGCCACCACCAACCGCGGCTGCCCACAGCCCTCAGATTCCTAACACCGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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| CDS CCA 90 bp | GCCTGGCGCGGTGTTAGGAATCTGAGGGCTGTGGGCAGCCGCGGTTaGTGGTGGCCTTCGCAAAGAAAAGTCATGGGCCAGACCATCAGG | + |
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Preference number: 5 (lower is better) Translates to: AWRGVRNLRAVGSRG*WWPSQRKVMGQTIR Trigger: CCTGATGGTCTGGCCCATGACTTTTCTTTGCGAAGGCCACCACCAACCGCGGCTGCCCACAGCCCTCAGATTCCTAACACCGCGCCAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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| CDS-3UTR CAA 90 bp | TTCCAGGGAAAGTACTCCTCCCATCTGTCCTGGCATAGTATGGGTCCATGGCCATGTGGGCAGCCGCGGTaGGTGGTGGCCTTCGCAAAG | + |
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Preference number: 5 (lower is better) Translates to: FQGKYSSHLSWHSMGPWPCGQPR*VVAFAK Trigger: CTTTGCGAAGGCCACCACCAACCGCGGCTGCCCACA...TGGCCATGGACCCATACTATGCCAGGACAGATGGGAGGAGTACTTTCCCTGGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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| CDS-3UTR CAA 90 bp | AGAGTTAAATTCTGGAGGAAGTTCTCAGGATTCTGCCTGAGAGCAGTCACAGCATGTGGGCAGCCGCGGTaGGTGGTGGCCTTCGCAAAG | + |
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Preference number: 5 (lower is better) Translates to: RVKFWRKFSGFCLRAVTACGQPR*VVAFAK Trigger: CTTTGCGAAGGCCACCACCAACCGCGGCTGCCCACA...TGCTGTGACTGCTCTCAGGCAGAATCCTGAGAACTTCCTCCAGAATTTAACTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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| CDS-3UTR CAA 90 bp | AAGTGCCAGCCTCTCTGTGGTCTGGGGACAGCGAGGTTCTGTAACAGGAGCACTACATCTTCTCACAGTTaGGATCCAGCGTCCAATAAT | + |
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Preference number: 5 (lower is better) Translates to: KCQPLCGLGTARFCNRSTTSSHS*DPASNN Trigger: ATTATTGGACGCTGGATCCAAACTGTGAGAAGATGT...AGTGCTCCTGTTACAGAACCTCGCTGTCCCCAGACCACAGAGAGGCTGGCACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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| CDS-3UTR CAA 90 bp | TTCCAGGGAAAGTACTCCTCCCATCTGTCCTGGCATAGTATGGGTCCATGGCCAACATCTTCTCACAGTTaGGATCCAGCGTCCAATAAT | + |
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Preference number: 5 (lower is better) Translates to: FQGKYSSHLSWHSMGPWPTSSHS*DPASNN Trigger: ATTATTGGACGCTGGATCCAAACTGTGAGAAGATGT...TGGCCATGGACCCATACTATGCCAGGACAGATGGGAGGAGTACTTTCCCTGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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| CDS CCA 72 bp | GGCGAGAGTCGCTGCAGCGTAGGATGGAGCCGGCCCTaGTCCCGTCGCGTAGGGCGCCGGGCTGAGCGCGGC | + |
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Preference number: 6 (lower is better) Translates to: GESRCSVGWSRP*SRRVGRRAERG Trigger: GCCGCGCTCAGCCCGGCGCCCTACGCGACGGGACCAGGGCCGGCTCCATCCTACGCTGCAGCGACTCTCGCC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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| CDS TCA 72 bp | GGGATGCGCGATGGCCCGGGTCAGGCCGTGCGGGACTaGGCAGGAACCCAGGCTGTCGCAGAACCCAGCCAT | + |
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Preference number: 6 (lower is better) Translates to: GMRDGPGQAVRD*AGTQAVAEPSH Trigger: ATGGCTGGGTTCTGCGACAGCCTGGGTTCCTGCTCAGTCCCGCACGGCCTGACCCGGGCCATCGCGCATCCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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| CDS GCA 72 bp | CTGTGGGTCCTGGGGAGTGGAGCCACGGGGCTCCAGTaGAGTTCCCTCTGGGCTGCTGGCTCCAGGCACAGC | + |
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Preference number: 6 (lower is better) Translates to: LWVLGSGATGLQ*SSLWAAGSRHS Trigger: GCTGTGCCTGGAGCCAGCAGCCCAGAGGGAACTGCACTGGAGCCCCGTGGCTCCACTCCCCAGGACCCACAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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| CDS CCA 72 bp | TCAGATCCGTTCGGCCGTAGCTCGGGGGATGCGCGATaGCCCGGGTCAGGCCGTGCGGGACTGAGCAGGAAC | + |
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Preference number: 6 (lower is better) Translates to: SDPFGRSSGDAR*PGSGRAGLSRN Trigger: GTTCCTGCTCAGTCCCGCACGGCCTGACCCGGGCCATCGCGCATCCCCCGAGCTACGGCCGAACGGATCTGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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| CDS TCA 72 bp | TGGCCCGGAGCGAAGCCTGGCGCGGTGTTAGGAATCTaGGGGCTGTGGGCAGCCGCGGTTGGTGGTGGCCTT | + |
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Preference number: 6 (lower is better) Translates to: WPGAKPGAVLGI*GLWAAAVGGGL Trigger: AAGGCCACCACCAACCGCGGCTGCCCACAGCCCTCAGATTCCTAACACCGCGCCAGGCTTCGCTCCGGGCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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| CDS TCA 72 bp | CGAGAGGCAAGTAGTGGTGGCCTCAGACGGGGATGGTaGGGTCTGTGGGTCCTGGGGAGTGGAGCCACGGGG | + |
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Preference number: 6 (lower is better) Translates to: REASSGGLRRGW*GLWVLGSGATG Trigger: CCCCGTGGCTCCACTCCCCAGGACCCACAGACCTCACCATCCCCGTCTGAGGCCACCACTACTTGCCTCTCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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| CDS CCA 72 bp | GCCTGTAGCCCCTGTCTGATGGCCCGGAGCGAAGCCTaGCGCGGTGTTAGGAATCTGAGGGCTGTGGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: ACSPCLMARSEA*RGVRNLRAVGS Trigger: GCTGCCCACAGCCCTCAGATTCCTAACACCGCGCCAGGCTTCGCTCCGGGCCATCAGACAGGGGCTACAGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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| CDS CCA 72 bp | GCCGCGGTTGGTGGTGGCCTTCGCAAAGAAAAGTCATaGGCCAGACCATCAGGGAGGGCGCCAAAGCCGCCG | + |
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Preference number: 6 (lower is better) Translates to: AAVGGGLRKEKS*ARPSGRAPKPP Trigger: CGGCGGCTTTGGCGCCCTCCCTGATGGTCTGGCCCATGACTTTTCTTTGCGAAGGCCACCACCAACCGCGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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| CDS TCA 72 bp | ATGAGGTGCCCCATCCTAAAGCCTGTAGCCCCTGTCTaGTGGCCCGGAGCGAAGCCTGGCGCGGTGTTAGGA | + |
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Preference number: 6 (lower is better) Translates to: MRCPILKPVAPV*WPGAKPGAVLG Trigger: TCCTAACACCGCGCCAGGCTTCGCTCCGGGCCATCAGACAGGGGCTACAGGCTTTAGGATGGGGCACCTCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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| CDS CCA 72 bp | AGGAATCTGAGGGCTGTGGGCAGCCGCGGTTGGTGGTaGCCTTCGCAAAGAAAAGTCATGGGCCAGACCATC | + |
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Preference number: 6 (lower is better) Translates to: RNLRAVGSRGWW*PSQRKVMGQTI Trigger: GATGGTCTGGCCCATGACTTTTCTTTGCGAAGGCCACCACCAACCGCGGCTGCCCACAGCCCTCAGATTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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| CDS CCA 72 bp | GGTGTTAGGAATCTGAGGGCTGTGGGCAGCCGCGGTTaGTGGTGGCCTTCGCAAAGAAAAGTCATGGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: GVRNLRAVGSRG*WWPSQRKVMGQ Trigger: CTGGCCCATGACTTTTCTTTGCGAAGGCCACCACCAACCGCGGCTGCCCACAGCCCTCAGATTCCTAACACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060356.8 ENSMUST00000238917.2 |
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