Pregenerated sensors for FOXF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042812Ensembl transcript IDs: ENSMUST00000181504.2
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACGGGTTATACCTCCAGAGTAAAGCAGTTTGTGGCGGTGGGCTCCTaGTCCCTGGGCCGGCCAGGCTGGGCTGGAGGGCCCCGTGGCCTC | + |
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Preference number: 1 (lower is better) Translates to: TGYTSRVKQFVAVGS*SLGRPGWAGGPRGL Trigger: GAGGCCACGGGGCCCTCCAGCCCAGCCTGGCCGGCCCAGGGACCAGGAGCCCACCGCCACAAACTGCTTTACTCTGGAGGTATAACCCGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| 3UTR TCA 90 bp | ACAGTGGCTCCAGGTATGTGTGCCATTCCCATAGAGATTCACCTGTaGTTGCTGGAGGAGACCCCGGGTTGGGAGAGGGGAGACCATTCC | + |
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Preference number: 1 (lower is better) Translates to: TVAPGMCAIPIEIHL*LLEETPGWERGDHS Trigger: GGAATGGTCTCCCCTCTCCCAACCCGGGGTCTCCTCCAGCAATCACAGGTGAATCTCTATGGGAATGGCACACATACCTGGAGCCACTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| 3UTR GCA 90 bp | CACTGTTTCCTTTTTAAAAAGACAAACAGTGGCTCCAGGTATGTGTaGCATTCCCATAGAGATTCACCTGTGATTGCTGGAGGAGACCCC | + |
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Preference number: 1 (lower is better) Translates to: HCFLFKKTNSGSRYV*HSHRDSPVIAGGDP Trigger: GGGGTCTCCTCCAGCAATCACAGGTGAATCTCTATGGGAATGGCACACATACCTGGAGCCACTGTTTGTCTTTTTAAAAAGGAAACAGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| 3UTR-3UTR CCA 90 bp | ATTGCTGGAGGAGACCCCGGGTTGGGAGAGGGGAGACCATTCCTGGTCCCATCCTGGGCTCCTGGTCCCTaGGCCGGCCAGGCTGGGCTG | + |
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Preference number: 2 (lower is better) Translates to: IAGGDPGLGEGRPFLVPSWAPGP*AGQAGL Trigger: CAGCCCAGCCTGGCCGGCCCAGGGACCAGGAGCCCA...GGATGGGACCAGGAATGGTCTCCCCTCTCCCAACCCGGGGTCTCCTCCAGCAAT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| 3UTR-3UTR TCA 90 bp | ATTGCTGGAGGAGACCCCGGGTTGGGAGAGGGGAGACCATTCCTGGTCCCATCCCTGACAGCTGCAGTCTaGCCTGGCCCCCGGCTGCCG | + |
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Preference number: 2 (lower is better) Translates to: IAGGDPGLGEGRPFLVPSLTAAV*PGPRLP Trigger: CGGCAGCCGGGGGCCAGGTCAGACTGCAGCTGTCAG...GGATGGGACCAGGAATGGTCTCCCCTCTCCCAACCCGGGGTCTCCTCCAGCAAT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| 3UTR-3UTR CCA 90 bp | ATTGCTGGAGGAGACCCCGGGTTGGGAGAGGGGAGACCATTCCTGGTCCCATCCCTAAAAACTGTCCCTTaGTGTGGAAGGGGCGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: IAGGDPGLGEGRPFLVPSLKTVP*CGRGGE Trigger: CTCTCCGCCCCTTCCACACCAAGGGACAGTTTTTAG...GGATGGGACCAGGAATGGTCTCCCCTCTCCCAACCCGGGGTCTCCTCCAGCAAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| 3UTR-3UTR GCA 90 bp | ATTGCTGGAGGAGACCCCGGGTTGGGAGAGGGGAGACCATTCCTGGTCCCATCCGGGCGGAGAGACCTCTaGAGAATTCTTTCCACGTAT | + |
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Preference number: 2 (lower is better) Translates to: IAGGDPGLGEGRPFLVPSGRRDL*RILSTY Trigger: ATACGTGGAAAGAATTCTGCAGAGGTCTCTCCGCCC...GGATGGGACCAGGAATGGTCTCCCCTCTCCCAACCCGGGGTCTCCTCCAGCAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| 3UTR-3UTR TCA 90 bp | ACACCAGCCAGATGGACCCTCCACTCCCTCATCTCAGTGTGTTCCTTTCTTTTCTGGCTTCCCCCGACATaGCACAGCACCTCCGTGGCT | + |
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Preference number: 2 (lower is better) Translates to: TPARWTLHSLISVCSFLFWLPPT*HSTSVA Trigger: AGCCACGGAGGTGCTGTGTCATGTCGGGGGAAGCCA...GAAAAGAAAGGAACACACTGAGATGAGGGAGTGGAGGGTCCATCTGGCTGGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| 3UTR-3UTR CCA 90 bp | ATTGCTGGAGGAGACCCCGGGTTGGGAGAGGGGAGACCATTCCTGGTCCCATCCGTATTTGATAATGATTaGTCTCACGTTCCCCTGCTT | + |
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Preference number: 2 (lower is better) Translates to: IAGGDPGLGEGRPFLVPSVFDND*SHVPLL Trigger: AAGCAGGGGAACGTGAGACCAATCATTATCAAATAC...GGATGGGACCAGGAATGGTCTCCCCTCTCCCAACCCGGGGTCTCCTCCAGCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| 3UTR-3UTR CCA 90 bp | AAATATTGCCAACCAAGTCACACCATTAATACTGAGAGGGCAGAGCTACGTGGTAGGGGAGACCATTCCTaGTCCCATCCTCCCCGGGAG | + |
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Preference number: 2 (lower is better) Translates to: KYCQPSHTINTERAELRGRGDHS*SHPPRE Trigger: CTCCCGGGGAGGATGGGACCAGGAATGGTCTCCCCT...ACCACGTAGCTCTGCCCTCTCAGTATTAATGGTGTGACTTGGTTGGCAATATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| 3UTR-3UTR CCA 90 bp | TATACAGTGCAGAAAGGAGGTTTAAAATACGTGTCACAGATGCCGCACCTCTGCCATCCTCCCCGGGAGTaGGGAAAAAGATGGCGGAAG | + |
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Preference number: 2 (lower is better) Translates to: YTVQKGGLKYVSQMPHLCHPPRE*GKRWRK Trigger: CTTCCGCCATCTTTTTCCCCACTCCCGGGGAGGATG...GCAGAGGTGCGGCATCTGTGACACGTATTTTAAACCTCCTTTCTGCACTGTATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| 3UTR-3UTR GCA 90 bp | ACACCAGCCAGATGGACCCTCCACTCCCTCATCTCAGTGTGTTCCTTTCTTTTCGGCTCCAGGTATGTGTaGCATTCCCATAGAGATTCA | + |
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Preference number: 2 (lower is better) Translates to: TPARWTLHSLISVCSFLFGSRYV*HSHRDS Trigger: TGAATCTCTATGGGAATGGCACACATACCTGGAGCC...GAAAAGAAAGGAACACACTGAGATGAGGGAGTGGAGGGTCCATCTGGCTGGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| 3UTR-3UTR TCA 90 bp | ACACCAGCCAGATGGACCCTCCACTCCCTCATCTCAGTGTGTTCCTTTCTTTTCAAAGTATTTATTTACTaGCAGCTGCAGTCTGACCTG | + |
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Preference number: 2 (lower is better) Translates to: TPARWTLHSLISVCSFLFKVFIY*QLQSDL Trigger: CAGGTCAGACTGCAGCTGTCAGTAAATAAATACTTT...GAAAAGAAAGGAACACACTGAGATGAGGGAGTGGAGGGTCCATCTGGCTGGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| 3UTR-3UTR GCA 90 bp | AAATATTGCCAACCAAGTCACACCATTAATACTGAGAGGGCAGAGCTACGTGGTCGGAAGGGAGATGTGTaGATTTCAAGACATTCTTTC | + |
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Preference number: 2 (lower is better) Translates to: KYCQPSHTINTERAELRGRKGDV*ISRHSF Trigger: GAAAGAATGTCTTGAAATGCACACATCTCCCTTCCG...ACCACGTAGCTCTGCCCTCTCAGTATTAATGGTGTGACTTGGTTGGCAATATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| 3UTR TCA 72 bp | CCAGGTATGTGTGCCATTCCCATAGAGATTCACCTGTaGTTGCTGGAGGAGACCCCGGGTTGGGAGAGGGGA | + |
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Preference number: 3 (lower is better) Translates to: PGMCAIPIEIHL*LLEETPGWERG Trigger: TCCCCTCTCCCAACCCGGGGTCTCCTCCAGCAATCACAGGTGAATCTCTATGGGAATGGCACACATACCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| 3UTR-3UTR CAA 90 bp | AAATATTGCCAACCAAGTCACACCATTAATACTGAGAGGGCAGAGCTACGTGGTGGAGGAGACCCCGGGTaGGGAGAGGGGAGACCATTC | + |
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Preference number: 3 (lower is better) Translates to: KYCQPSHTINTERAELRGGGDPG*GEGRPF Trigger: GAATGGTCTCCCCTCTCCCAACCCGGGGTCTCCTCC...ACCACGTAGCTCTGCCCTCTCAGTATTAATGGTGTGACTTGGTTGGCAATATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| 3UTR-3UTR CAA 90 bp | ACACCAGCCAGATGGACCCTCCACTCCCTCATCTCAGTGTGTTCCTTTCTTTTCTGCTCCCAGTCTGTGTaGGGATTTTCTTTACAAATA | + |
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Preference number: 3 (lower is better) Translates to: TPARWTLHSLISVCSFLFCSQSV*GFSLQI Trigger: TATTTGTAAAGAAAATCCCAACACAGACTGGGAGCA...GAAAAGAAAGGAACACACTGAGATGAGGGAGTGGAGGGTCCATCTGGCTGGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| 3UTR GCA 72 bp | CTTTTTAAAAAGACAAACAGTGGCTCCAGGTATGTGTaGCATTCCCATAGAGATTCACCTGTGATTGCTGGA | + |
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Preference number: 3 (lower is better) Translates to: LFKKTNSGSRYV*HSHRDSPVIAG Trigger: TCCAGCAATCACAGGTGAATCTCTATGGGAATGGCACACATACCTGGAGCCACTGTTTGTCTTTTTAAAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| 3UTR GCA 72 bp | CCCACAATAATGACAACAACTCTACACGGCAAATATTaGCAACCAAGTCACACCATTAATACTGAGAGGGCA | + |
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Preference number: 3 (lower is better) Translates to: PTIMTTTLHGKY*QPSHTINTERA Trigger: TGCCCTCTCAGTATTAATGGTGTGACTTGGTTGGCAATATTTGCCGTGTAGAGTTGTTGTCATTATTGTGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS-3UTR CCA 90 bp | ATTGCTGGAGGAGACCCCGGGTTGGGAGAGGGGAGACCATTCCTGGTCCCATCCCCACCCATGTACGAGTaGCCGCCGTTGGAGGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: IAGGDPGLGEGRPFLVPSPPMYE*PPLEGR Trigger: CCTGCCCTCCAACGGCGGCCACTCGTACATGGGTGG...GGATGGGACCAGGAATGGTCTCCCCTCTCCCAACCCGGGGTCTCCTCCAGCAAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS-3UTR GCA 90 bp | ATTGCTGGAGGAGACCCCGGGTTGGGAGAGGGGAGACCATTCCTGGTCCCATCCGGGAGTGCGTGGAGATaGTGCCAGACAGGGGGTTGG | + |
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Preference number: 4 (lower is better) Translates to: IAGGDPGLGEGRPFLVPSGSAWR*CQTGGW Trigger: CCAACCCCCTGTCTGGCAGCATCTCCACGCACTCCC...GGATGGGACCAGGAATGGTCTCCCCTCTCCCAACCCGGGGTCTCCTCCAGCAAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS-3UTR CCA 90 bp | ATTGCTGGAGGAGACCCCGGGTTGGGAGAGGGGAGACCATTCCTGGTCCCATCCGTGGCACCGAGTGGCTaGGCAAAGCCATGCCGTCCA | + |
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Preference number: 4 (lower is better) Translates to: IAGGDPGLGEGRPFLVPSVAPSG*AKPCRP Trigger: TGGACGGCATGGCTTTGCCCAGCCACTCGGTGCCAC...GGATGGGACCAGGAATGGTCTCCCCTCTCCCAACCCGGGGTCTCCTCCAGCAAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS-3UTR GCA 90 bp | ATTGCTGGAGGAGACCCCGGGTTGGGAGAGGGGAGACCATTCCTGGTCCCATCCGGTTGGCGGCTGGGTTaGAAGGGGACAGAGGCTGTT | + |
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Preference number: 4 (lower is better) Translates to: IAGGDPGLGEGRPFLVPSGWRLG*KGTEAV Trigger: AACAGCCTCTGTCCCCTTGCAACCCAGCCGCCAACC...GGATGGGACCAGGAATGGTCTCCCCTCTCCCAACCCGGGGTCTCCTCCAGCAAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS-3UTR TCA 90 bp | TGGGGCTATCCCTTTTCACTTGCTGACGGGTTATACCTCCAGAGTAAAGCAGTTAGGAGGCCCCGCTGTTaGGAGCCGCGGAGGCCGCGG | + |
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Preference number: 4 (lower is better) Translates to: WGYPFSLADGLYLQSKAVRRPRC*EPRRPR Trigger: CCGCGGCCTCCGCGGCTCTCAACAGCGGGGCCTCCT...AACTGCTTTACTCTGGAGGTATAACCCGTCAGCAAGTGAAAAGGGATAGCCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS-3UTR CCA 90 bp | ACACCAGCCAGATGGACCCTCCACTCCCTCATCTCAGTGTGTTCCTTTCTTTTCCCAGCGCCAGGCTGTTaGGCGCGCACGAGAGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: TPARWTLHSLISVCSFLFPAPGC*ARTRGL Trigger: GAGGCCTCTCGTGCGCGCCCAACAGCCTGGCGCTGG...GAAAAGAAAGGAACACACTGAGATGAGGGAGTGGAGGGTCCATCTGGCTGGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS-3UTR CCA 90 bp | ACACCAGCCAGATGGACCCTCCACTCCCTCATCTCAGTGTGTTCCTTTCTTTTCACGAGTGGCCGCCGTTaGAGGGCAGGTGTGGCACCG | + |
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Preference number: 4 (lower is better) Translates to: TPARWTLHSLISVCSFLFTSGRR*RAGVAP Trigger: CGGTGCCACACCTGCCCTCCAACGGCGGCCACTCGT...GAAAAGAAAGGAACACACTGAGATGAGGGAGTGGAGGGTCCATCTGGCTGGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS-3UTR CCA 90 bp | ATTGCTGGAGGAGACCCCGGGTTGGGAGAGGGGAGACCATTCCTGGTCCCATCCGTTTTGGTGAAGGTATaGCTGCTCCAGGGAGTGCGT | + |
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Preference number: 4 (lower is better) Translates to: IAGGDPGLGEGRPFLVPSVLVKV*LLQGVR Trigger: ACGCACTCCCTGGAGCAGCCATACCTTCACCAAAAC...GGATGGGACCAGGAATGGTCTCCCCTCTCCCAACCCGGGGTCTCCTCCAGCAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS-3UTR TCA 90 bp | TATACAGTGCAGAAAGGAGGTTTAAAATACGTGTCACAGATGCCGCACCTCTGCGGCCGGCAGCAGCGGTaGAGCGGGCACCGAGCTGTC | + |
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Preference number: 4 (lower is better) Translates to: YTVQKGGLKYVSQMPHLCGRQQR*SGHRAV Trigger: GACAGCTCGGTGCCCGCTTCACCGCTGCTGCCGGCC...GCAGAGGTGCGGCATCTGTGACACGTATTTTAAACCTCCTTTCTGCACTGTATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS-3UTR GCA 90 bp | ACACCAGCCAGATGGACCCTCCACTCCCTCATCTCAGTGTGTTCCTTTCTTTTCCGCGGGCGGCCAGGCTaGTGCAGAGCTGGAGTAAAC | + |
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Preference number: 4 (lower is better) Translates to: TPARWTLHSLISVCSFLFRGRPG*CRAGVN Trigger: GTTTACTCCAGCTCTGCAGCAGCCTGGCCGCCCGCG...GAAAAGAAAGGAACACACTGAGATGAGGGAGTGGAGGGTCCATCTGGCTGGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS-3UTR CCA 90 bp | TGGGGCTATCCCTTTTCACTTGCTGACGGGTTATACCTCCAGAGTAAAGCAGTTTGGTCTTCTTGGCCTTaGTGGGGCCCGCCGCCGCGG | + |
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Preference number: 4 (lower is better) Translates to: WGYPFSLADGLYLQSKAVWSSWP*WGPPPR Trigger: CCGCGGCGGCGGGCCCCACCAAGGCCAAGAAGACCA...AACTGCTTTACTCTGGAGGTATAACCCGTCAGCAAGTGAAAAGGGATAGCCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS-3UTR GCA 90 bp | TGGGGCTATCCCTTTTCACTTGCTGACGGGTTATACCTCCAGAGTAAAGCAGTTACCGAGCTGTCGTGGTaGGGGTACTCCCCGGCCGCA | + |
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Preference number: 4 (lower is better) Translates to: WGYPFSLADGLYLQSKAVTELSW*GYSPAA Trigger: TGCGGCCGGGGAGTACCCGCACCACGACAGCTCGGT...AACTGCTTTACTCTGGAGGTATAACCCGTCAGCAAGTGAAAAGGGATAGCCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS-3UTR GCA 90 bp | ACACCAGCCAGATGGACCCTCCACTCCCTCATCTCAGTGTGTTCCTTTCTTTTCAGTGCGTGGAGATGCTaGCAGACAGGGGGTTGGCGG | + |
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Preference number: 4 (lower is better) Translates to: TPARWTLHSLISVCSFLFSAWRC*QTGGWR Trigger: CCGCCAACCCCCTGTCTGGCAGCATCTCCACGCACT...GAAAAGAAAGGAACACACTGAGATGAGGGAGTGGAGGGTCCATCTGGCTGGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS-3UTR GCA 90 bp | ACACCAGCCAGATGGACCCTCCACTCCCTCATCTCAGTGTGTTCCTTTCTTTTCGGCTGCTCCAGGGAGTaGGTGGAGATGCTGCCAGAC | + |
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Preference number: 4 (lower is better) Translates to: TPARWTLHSLISVCSFLFGCSRE*VEMLPD Trigger: GTCTGGCAGCATCTCCACGCACTCCCTGGAGCAGCC...GAAAAGAAAGGAACACACTGAGATGAGGGAGTGGAGGGTCCATCTGGCTGGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS-3UTR TCA 90 bp | ACACCAGCCAGATGGACCCTCCACTCCCTCATCTCAGTGTGTTCCTTTCTTTTCCTGGGCGACTGTGAGTaGTACCGAGGGATGCCTTGC | + |
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Preference number: 4 (lower is better) Translates to: TPARWTLHSLISVCSFLFLGDCE*YRGMPC Trigger: GCAAGGCATCCCTCGGTATCACTCACAGTCGCCCAG...GAAAAGAAAGGAACACACTGAGATGAGGGAGTGGAGGGTCCATCTGGCTGGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS-3UTR CCA 90 bp | AAATATTGCCAACCAAGTCACACCATTAATACTGAGAGGGCAGAGCTACGTGGTTCTTCTTGGCCTTGGTaGGGCCCGCCGCCGCGGGGT | + |
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Preference number: 4 (lower is better) Translates to: KYCQPSHTINTERAELRGSSWPW*GPPPRG Trigger: ACCCCGCGGCGGCGGGCCCCACCAAGGCCAAGAAGA...ACCACGTAGCTCTGCCCTCTCAGTATTAATGGTGTGACTTGGTTGGCAATATTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS-3UTR CCA 90 bp | TATACAGTGCAGAAAGGAGGTTTAAAATACGTGTCACAGATGCCGCACCTCTGCCGGCGTTGGTCTTCTTaGCCTTGGTGGGGCCCGCCG | + |
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Preference number: 4 (lower is better) Translates to: YTVQKGGLKYVSQMPHLCRRWSS*PWWGPP Trigger: CGGCGGGCCCCACCAAGGCCAAGAAGACCAACGCCG...GCAGAGGTGCGGCATCTGTGACACGTATTTTAAACCTCCTTTCTGCACTGTATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS-3UTR CCA 90 bp | AAATATTGCCAACCAAGTCACACCATTAATACTGAGAGGGCAGAGCTACGTGGTGGCACCGAGCTGTCGTaGTGCGGGTACTCCCCGGCC | + |
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Preference number: 4 (lower is better) Translates to: KYCQPSHTINTERAELRGGTELS*CGYSPA Trigger: GGCCGGGGAGTACCCGCACCACGACAGCTCGGTGCC...ACCACGTAGCTCTGCCCTCTCAGTATTAATGGTGTGACTTGGTTGGCAATATTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS-3UTR CCA 90 bp | TGGGGCTATCCCTTTTCACTTGCTGACGGGTTATACCTCCAGAGTAAAGCAGTTCAGGGGGTTGGCGGCTaGGTTGCAAGGGGACAGAGG | + |
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Preference number: 4 (lower is better) Translates to: WGYPFSLADGLYLQSKAVQGVGG*VARGQR Trigger: CCTCTGTCCCCTTGCAACCCAGCCGCCAACCCCCTG...AACTGCTTTACTCTGGAGGTATAACCCGTCAGCAAGTGAAAAGGGATAGCCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS-3UTR GCA 90 bp | ACACCAGCCAGATGGACCCTCCACTCCCTCATCTCAGTGTGTTCCTTTCTTTTCAATGGCCATTCATCATaGCCAAGCCGCCCTCCAGCG | + |
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Preference number: 4 (lower is better) Translates to: TPARWTLHSLISVCSFLFNGHSS*PSRPPA Trigger: CGCTGGAGGGCGGCTTGGGCATGATGAATGGCCATT...GAAAAGAAAGGAACACACTGAGATGAGGGAGTGGAGGGTCCATCTGGCTGGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS-3UTR GCA 90 bp | TGGGGCTATCCCTTTTCACTTGCTGACGGGTTATACCTCCAGAGTAAAGCAGTTGGCTGGGCAAAGCCATaGCGTCCACGTTGCCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: WGYPFSLADGLYLQSKAVGWAKP*RPRCQP Trigger: TGGCTGGCAACGTGGACGGCATGGCTTTGCCCAGCC...AACTGCTTTACTCTGGAGGTATAACCCGTCAGCAAGTGAAAAGGGATAGCCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS-3UTR CCA 90 bp | TATACAGTGCAGAAAGGAGGTTTAAAATACGTGTCACAGATGCCGCACCTCTGCGCCGCACGCCGGCGTTaGTCTTCTTGGCCTTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: YTVQKGGLKYVSQMPHLCAARRR*SSWPWW Trigger: CCACCAAGGCCAAGAAGACCAACGCCGGCGTGCGGC...GCAGAGGTGCGGCATCTGTGACACGTATTTTAAACCTCCTTTCTGCACTGTATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS-3UTR CCA 90 bp | TGGGGCTATCCCTTTTCACTTGCTGACGGGTTATACCTCCAGAGTAAAGCAGTTAGGTGTGGCACCGAGTaGCTGGGCAAAGCCATGCCG | + |
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Preference number: 4 (lower is better) Translates to: WGYPFSLADGLYLQSKAVRCGTE*LGKAMP Trigger: CGGCATGGCTTTGCCCAGCCACTCGGTGCCACACCT...AACTGCTTTACTCTGGAGGTATAACCCGTCAGCAAGTGAAAAGGGATAGCCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS-3UTR CCA 90 bp | TGGGGCTATCCCTTTTCACTTGCTGACGGGTTATACCTCCAGAGTAAAGCAGTTGTTGGAGGGCAGGTGTaGCACCGAGTGGCTGGGCAA | + |
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Preference number: 4 (lower is better) Translates to: WGYPFSLADGLYLQSKAVVGGQV*HRVAGQ Trigger: TTGCCCAGCCACTCGGTGCCACACCTGCCCTCCAAC...AACTGCTTTACTCTGGAGGTATAACCCGTCAGCAAGTGAAAAGGGATAGCCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS-3UTR CCA 90 bp | TATACAGTGCAGAAAGGAGGTTTAAAATACGTGTCACAGATGCCGCACCTCTGCTGCCAGACAGGGGGTTaGCGGCTGGGTTGCAAGGGG | + |
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Preference number: 4 (lower is better) Translates to: YTVQKGGLKYVSQMPHLCCQTGG*RLGCKG Trigger: CCCCTTGCAACCCAGCCGCCAACCCCCTGTCTGGCA...GCAGAGGTGCGGCATCTGTGACACGTATTTTAAACCTCCTTTCTGCACTGTATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS-3UTR TCA 90 bp | TATACAGTGCAGAAAGGAGGTTTAAAATACGTGTCACAGATGCCGCACCTCTGCTGTCGGGGAGGTGGTTaGAGCCCAGCCCGTTCACCA | + |
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Preference number: 4 (lower is better) Translates to: YTVQKGGLKYVSQMPHLCCRGGG*SPARSP Trigger: TGGTGAACGGGCTGGGCTTCAACCACCTCCCCGACA...GCAGAGGTGCGGCATCTGTGACACGTATTTTAAACCTCCTTTCTGCACTGTATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS-3UTR TCA 90 bp | TGGGGCTATCCCTTTTCACTTGCTGACGGGTTATACCTCCAGAGTAAAGCAGTTCATGCTGGGCGACTGTaGGTGATACCGAGGGATGCC | + |
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Preference number: 4 (lower is better) Translates to: WGYPFSLADGLYLQSKAVHAGRL*VIPRDA Trigger: GGCATCCCTCGGTATCACTCACAGTCGCCCAGCATG...AACTGCTTTACTCTGGAGGTATAACCCGTCAGCAAGTGAAAAGGGATAGCCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS-3UTR CCA 90 bp | TGGGGCTATCCCTTTTCACTTGCTGACGGGTTATACCTCCAGAGTAAAGCAGTTAGGCTGCTGCAGAGCTaGAGTAAACGGCGTGCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: WGYPFSLADGLYLQSKAVRLLQS*SKRRAA Trigger: AGCCGCACGCCGTTTACTCCAGCTCTGCAGCAGCCT...AACTGCTTTACTCTGGAGGTATAACCCGTCAGCAAGTGAAAAGGGATAGCCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS-3UTR CCA 90 bp | AAATATTGCCAACCAAGTCACACCATTAATACTGAGAGGGCAGAGCTACGTGGTGCTCCAGGGAGTGCGTaGAGATGCTGCCAGACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KYCQPSHTINTERAELRGAPGSA*RCCQTG Trigger: CCCTGTCTGGCAGCATCTCCACGCACTCCCTGGAGC...ACCACGTAGCTCTGCCCTCTCAGTATTAATGGTGTGACTTGGTTGGCAATATTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS-3UTR TCA 90 bp | TATACAGTGCAGAAAGGAGGTTTAAAATACGTGTCACAGATGCCGCACCTCTGCTGCTGTACACAGGCTTaGGCGCCTGGCATTTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: YTVQKGGLKYVSQMPHLCCCTQA*APGISF Trigger: GAAGGAAATGCCAGGCGCTCAAGCCTGTGTACAGCA...GCAGAGGTGCGGCATCTGTGACACGTATTTTAAACCTCCTTTCTGCACTGTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS-3UTR GCA 90 bp | TATACAGTGCAGAAAGGAGGTTTAAAATACGTGTCACAGATGCCGCACCTCTGCCCATGCCGTCCACGTTaGCAGCCAAATGGCCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: YTVQKGGLKYVSQMPHLCPCRPR*QPNGHS Trigger: TGAATGGCCATTTGGCTGGCAACGTGGACGGCATGG...GCAGAGGTGCGGCATCTGTGACACGTATTTTAAACCTCCTTTCTGCACTGTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS-3UTR TCA 90 bp | ACACCAGCCAGATGGACCCTCCACTCCCTCATCTCAGTGTGTTCCTTTCTTTTCAAGAGGCCATGGCATTaGAAGAGAAGACAAACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TPARWTLHSLISVCSFLFKRPWH*KRRQTP Trigger: AGGAGTTTGTCTTCTCTTTCAATGCCATGGCCTCTT...GAAAAGAAAGGAACACACTGAGATGAGGGAGTGGAGGGTCCATCTGGCTGGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS-3UTR GCA 90 bp | TGGGGCTATCCCTTTTCACTTGCTGACGGGTTATACCTCCAGAGTAAAGCAGTTCCTTTCTGTCACACATaGTGGGCGACTGTGAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: WGYPFSLADGLYLQSKAVPFCHT*WATVSD Trigger: ATCACTCACAGTCGCCCAGCATGTGTGACAGAAAGG...AACTGCTTTACTCTGGAGGTATAACCCGTCAGCAAGTGAAAAGGGATAGCCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS-3UTR CCA 90 bp | TGGGGCTATCCCTTTTCACTTGCTGACGGGTTATACCTCCAGAGTAAAGCAGTTACGTTGCCAGCCAAATaGCCATTCATCATGCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: WGYPFSLADGLYLQSKAVTLPAK*PFIMPK Trigger: CTTGGGCATGATGAATGGCCATTTGGCTGGCAACGT...AACTGCTTTACTCTGGAGGTATAACCCGTCAGCAAGTGAAAAGGGATAGCCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS-3UTR CCA 90 bp | TATACAGTGCAGAAAGGAGGTTTAAAATACGTGTCACAGATGCCGCACCTCTGCTTCTGTCACACATGCTaGGCGACTGTGAGTGATACC | + |
|
Preference number: 4 (lower is better) Translates to: YTVQKGGLKYVSQMPHLCFCHTC*ATVSDT Trigger: GGTATCACTCACAGTCGCCCAGCATGTGTGACAGAA...GCAGAGGTGCGGCATCTGTGACACGTATTTTAAACCTCCTTTCTGCACTGTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS TCA 90 bp | GGCGTGCGGCTCCATGACTCCGCCGGCGCCGGCCGGCAGCAGCGGTaGAGCGGGCACCGAGCTGTCGTGGTGCGGGTACTCCCCGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: GVRLHDSAGAGRQQR*SGHRAVVVRVLPGR Trigger: GCGGCCGGGGAGTACCCGCACCACGACAGCTCGGTGCCCGCTTCACCGCTGCTGCCGGCCGGCGCCGGCGGAGTCATGGAGCCGCACGCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS CCA 90 bp | AGTAGGGCGGCTTCTCCGGCCGCCGCACGCCGGCGTTGGTCTTCTTaGCCTTGGTGGGGCCCGCCGCCGCGGGGTCCATGGCCTGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: SRAASPAAARRRWSS*PWWGPPPRGPWPGR Trigger: GCGGCCAGGCCATGGACCCCGCGGCGGCGGGCCCCACCAAGGCCAAGAAGACCAACGCCGGCGTGCGGCGGCCGGAGAAGCCGCCCTACT 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS GCA 90 bp | GGCCCCGCTGTTGAGAGCCGCGGAGGCCGCGGGCGGCCAGGCTGCTaGAGAGCTGGAGTAAACGGCGTGCGGCTCCATGACTCCGCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: GPAVESRGGRGRPGC*RAGVNGVRLHDSAG Trigger: GCCGGCGGAGTCATGGAGCCGCACGCCGTTTACTCCAGCTCTGCAGCAGCCTGGCCGCCCGCGGCCTCCGCGGCTCTCAACAGCGGGGCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS CCA 90 bp | CGGCCGCAGAGCCACCGCAGCCACCCATGTACGAGTGGCCGCCGTTaGAGGGCAGGTGTGGCACCGAGTGGCTGGGCAAAGCCATGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: RPQSHRSHPCTSGRR*RAGVAPSGWAKPCR Trigger: ACGGCATGGCTTTGCCCAGCCACTCGGTGCCACACCTGCCCTCCAACGGCGGCCACTCGTACATGGGTGGCTGCGGTGGCTCTGCGGCCG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS CCA 90 bp | CCCATGTACGAGTGGCCGCCGTTGGAGGGCAGGTGTGGCACCGAGTaGCTGGGCAAAGCCATGCCGTCCACGTTGCCAGCCAAATGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PMYEWPPLEGRCGTE*LGKAMPSTLPAKWP Trigger: TGGCCATTTGGCTGGCAACGTGGACGGCATGGCTTTGCCCAGCCACTCGGTGCCACACCTGCCCTCCAACGGCGGCCACTCGTACATGGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS GCA 90 bp | GCAAAGCCATGCCGTCCACGTTGCCAGCCAAATGGCCATTCATCATaGCCAAGCCGCCCTCCAGCGCCAGGCTGTTGGGCGCGCACGAGA | + |
|
Preference number: 5 (lower is better) Translates to: AKPCRPRCQPNGHSS*PSRPPAPGCWARTR Trigger: TCTCGTGCGCGCCCAACAGCCTGGCGCTGGAGGGCGGCTTGGGCATGATGAATGGCCATTTGGCTGGCAACGTGGACGGCATGGCTTTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS GCA 90 bp | GCAGGTGTGGCACCGAGTGGCTGGGCAAAGCCATGCCGTCCACGTTaGCAGCCAAATGGCCATTCATCATGCCCAAGCCGCCCTCCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: AGVAPSGWAKPCRPR*QPNGHSSCPSRPPA Trigger: CGCTGGAGGGCGGCTTGGGCATGATGAATGGCCATTTGGCTGGCAACGTGGACGGCATGGCTTTGCCCAGCCACTCGGTGCCACACCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS CCA 90 bp | CTCCAGGGAGTGCGTGGAGATGCTGCCAGACAGGGGGTTGGCGGCTaGGTTGCAAGGGGACAGAGGCTGTTGCTTGATGTAGGAGGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: LQGVRGDAARQGVGG*VARGQRLLLDVGGP Trigger: GGGGCCTCCTACATCAAGCAACAGCCTCTGTCCCCTTGCAACCCAGCCGCCAACCCCCTGTCTGGCAGCATCTCCACGCACTCCCTGGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS-3UTR CAA 90 bp | ATTGCTGGAGGAGACCCCGGGTTGGGAGAGGGGAGACCATTCCTGGTCCCATCCGGGTTGGCGGCTGGGTaGCAAGGGGACAGAGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: IAGGDPGLGEGRPFLVPSGLAAG*QGDRGC Trigger: ACAGCCTCTGTCCCCTTGCAACCCAGCCGCCAACCC...GGATGGGACCAGGAATGGTCTCCCCTCTCCCAACCCGGGGTCTCCTCCAGCAAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS GCA 90 bp | CGCCGTTGGAGGGCAGGTGTGGCACCGAGTGGCTGGGCAAAGCCATaGCGTCCACGTTGCCAGCCAAATGGCCATTCATCATGCCCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: RRWRAGVAPSGWAKP*RPRCQPNGHSSCPS Trigger: GCTTGGGCATGATGAATGGCCATTTGGCTGGCAACGTGGACGGCATGGCTTTGCCCAGCCACTCGGTGCCACACCTGCCCTCCAACGGCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS CCA 90 bp | ACCGAGTGGCTGGGCAAAGCCATGCCGTCCACGTTGCCAGCCAAATaGCCATTCATCATGCCCAAGCCGCCCTCCAGCGCCAGGCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: TEWLGKAMPSTLPAK*PFIMPKPPSSARLL Trigger: CAACAGCCTGGCGCTGGAGGGCGGCTTGGGCATGATGAATGGCCATTTGGCTGGCAACGTGGACGGCATGGCTTTGCCCAGCCACTCGGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS CCA 90 bp | TGTACGAGTGGCCGCCGTTGGAGGGCAGGTGTGGCACCGAGTGGCTaGGCAAAGCCATGCCGTCCACGTTGCCAGCCAAATGGCCATTCA | + |
|
Preference number: 5 (lower is better) Translates to: CTSGRRWRAGVAPSG*AKPCRPRCQPNGHS Trigger: TGAATGGCCATTTGGCTGGCAACGTGGACGGCATGGCTTTGCCCAGCCACTCGGTGCCACACCTGCCCTCCAACGGCGGCCACTCGTACA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS CCA 90 bp | CGTTGTGACTGTTTTGGTGAAGGTATGGCTGCTCCAGGGAGTGCGTaGAGATGCTGCCAGACAGGGGGTTGGCGGCTGGGTTGCAAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: RCDCFGEGMAAPGSA*RCCQTGGWRLGCKG Trigger: CCCCTTGCAACCCAGCCGCCAACCCCCTGTCTGGCAGCATCTCCACGCACTCCCTGGAGCAGCCATACCTTCACCAAAACAGTCACAACG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS CCA 90 bp | GCCTTGCAGTTCTGCCGGCCCGTTGTGACTGTTTTGGTGAAGGTATaGCTGCTCCAGGGAGTGCGTGGAGATGCTGCCAGACAGGGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: ALQFCRPVVTVLVKV*LLQGVRGDAARQGV Trigger: AACCCCCTGTCTGGCAGCATCTCCACGCACTCCCTGGAGCAGCCATACCTTCACCAAAACAGTCACAACGGGCCGGCAGAACTGCAAGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS-3UTR CAA 90 bp | ACACCAGCCAGATGGACCCTCCACTCCCTCATCTCAGTGTGTTCCTTTCTTTTCCCGGCGTTGGTCTTCTaGGCCTTGGTGGGGCCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: TPARWTLHSLISVCSFLFPALVF*ALVGPA Trigger: GGCGGGCCCCACCAAGGCCAAGAAGACCAACGCCGG...GAAAAGAAAGGAACACACTGAGATGAGGGAGTGGAGGGTCCATCTGGCTGGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS-3UTR CAA 90 bp | ACACCAGCCAGATGGACCCTCCACTCCCTCATCTCAGTGTGTTCCTTTCTTTTCTCCAGCGCCAGGCTGTaGGGCGCGCACGAGAGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: TPARWTLHSLISVCSFLFSSARL*GAHERP Trigger: AGGCCTCTCGTGCGCGCCCAACAGCCTGGCGCTGGA...GAAAAGAAAGGAACACACTGAGATGAGGGAGTGGAGGGTCCATCTGGCTGGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS-3UTR CAA 90 bp | ACACCAGCCAGATGGACCCTCCACTCCCTCATCTCAGTGTGTTCCTTTCTTTTCCGCCGCACGCCGGCGTaGGTCTTCTTGGCCTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: TPARWTLHSLISVCSFLFRRTPA*VFLALV Trigger: CACCAAGGCCAAGAAGACCAACGCCGGCGTGCGGCG...GAAAAGAAAGGAACACACTGAGATGAGGGAGTGGAGGGTCCATCTGGCTGGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS-3UTR CAA 90 bp | TATACAGTGCAGAAAGGAGGTTTAAAATACGTGTCACAGATGCCGCACCTCTGCTTGGTCTTCTTGGCCTaGGTGGGGCCCGCCGCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: YTVQKGGLKYVSQMPHLCLVFLA*VGPAAA Trigger: CGCGGCGGCGGGCCCCACCAAGGCCAAGAAGACCAA...GCAGAGGTGCGGCATCTGTGACACGTATTTTAAACCTCCTTTCTGCACTGTATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS-3UTR CAA 90 bp | ACACCAGCCAGATGGACCCTCCACTCCCTCATCTCAGTGTGTTCCTTTCTTTTCCTGAGGGTCAGGCGCTaGCTGGGCGAGCTCTGGATA | + |
|
Preference number: 5 (lower is better) Translates to: TPARWTLHSLISVCSFLFLRVRR*LGELWI Trigger: TATCCAGAGCTCGCCCAGCAAGCGCCTGACCCTCAG...GAAAAGAAAGGAACACACTGAGATGAGGGAGTGGAGGGTCCATCTGGCTGGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS GCA 90 bp | CCTTTCTGTCACACATGCTGGGCGACTGTGAGTGATACCGAGGGATaGCTTGCAGTTCTGCCGGCCCGTTGTGACTGTTTTGGTGAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: PFCHTCWATVSDTEG*LAVLPARCDCFGEG Trigger: ACCTTCACCAAAACAGTCACAACGGGCCGGCAGAACTGCAAGGCATCCCTCGGTATCACTCACAGTCGCCCAGCATGTGTGACAGAAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS-3UTR CAA 90 bp | ACACCAGCCAGATGGACCCTCCACTCCCTCATCTCAGTGTGTTCCTTTCTTTTCGCCATGCCGTCCACGTaGCCAGCCAAATGGCCATTC | + |
|
Preference number: 5 (lower is better) Translates to: TPARWTLHSLISVCSFLFAMPST*PAKWPF Trigger: GAATGGCCATTTGGCTGGCAACGTGGACGGCATGGC...GAAAAGAAAGGAACACACTGAGATGAGGGAGTGGAGGGTCCATCTGGCTGGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS TCA 90 bp | GAAAGAGAAGACAAACTCCTTTCTGTCACACATGCTGGGCGACTGTaGGTGATACCGAGGGATGCCTTGCAGTTCTGCCGGCCCGTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: EREDKLLSVTHAGRL*VIPRDALQFCRPVV Trigger: CACAACGGGCCGGCAGAACTGCAAGGCATCCCTCGGTATCACTCACAGTCGCCCAGCATGTGTGACAGAAAGGAGTTTGTCTTCTCTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS-3UTR CAA 90 bp | AAATATTGCCAACCAAGTCACACCATTAATACTGAGAGGGCAGAGCTACGTGGTGTGTCGGGGAGGTGGTaGAAGCCCAGCCCGTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: KYCQPSHTINTERAELRGVSGRW*KPSPFT Trigger: GGTGAACGGGCTGGGCTTCAACCACCTCCCCGACAC...ACCACGTAGCTCTGCCCTCTCAGTATTAATGGTGTGACTTGGTTGGCAATATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS-3UTR CAA 90 bp | TGGGGCTATCCCTTTTCACTTGCTGACGGGTTATACCTCCAGAGTAAAGCAGTTAGGGGACAGAGGCTGTaGCTTGATGTAGGAGGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: WGYPFSLADGLYLQSKAVRGQRL*LDVGGP Trigger: GGGGCCTCCTACATCAAGCAACAGCCTCTGTCCCCT...AACTGCTTTACTCTGGAGGTATAACCCGTCAGCAAGTGAAAAGGGATAGCCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS-3UTR CAA 90 bp | TATACAGTGCAGAAAGGAGGTTTAAAATACGTGTCACAGATGCCGCACCTCTGCACACGGCTTGATGTCTaGGTAGGTGACCTGCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: YTVQKGGLKYVSQMPHLCTRLDV*VGDLLV Trigger: CACCAGCAGGTCACCTACCAAGACATCAAGCCGTGT...GCAGAGGTGCGGCATCTGTGACACGTATTTTAAACCTCCTTTCTGCACTGTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS-3UTR CAA 90 bp | TGGGGCTATCCCTTTTCACTTGCTGACGGGTTATACCTCCAGAGTAAAGCAGTTGAAGAGGCCATGGCATaGAAAGAGAAGACAAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: WGYPFSLADGLYLQSKAVEEAMA*KEKTNS Trigger: GGAGTTTGTCTTCTCTTTCAATGCCATGGCCTCTTC...AACTGCTTTACTCTGGAGGTATAACCCGTCAGCAAGTGAAAAGGGATAGCCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS CCA 72 bp | GCCGCCGCACGCCGGCGTTGGTCTTCTTGGCCTTGGTaGGGCCCGCCGCCGCGGGGTCCATGGCCTGGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: AAARRRWSSWPW*GPPPRGPWPGR Trigger: GCGGCCAGGCCATGGACCCCGCGGCGGCGGGCCCCACCAAGGCCAAGAAGACCAACGCCGGCGTGCGGCGGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS CCA 72 bp | GCTTCTCCGGCCGCCGCACGCCGGCGTTGGTCTTCTTaGCCTTGGTGGGGCCCGCCGCCGCGGGGTCCATGG | + |
|
Preference number: 6 (lower is better) Translates to: ASPAAARRRWSS*PWWGPPPRGPW Trigger: CCATGGACCCCGCGGCGGCGGGCCCCACCAAGGCCAAGAAGACCAACGCCGGCGTGCGGCGGCCGGAGAAGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS CCA 72 bp | AGTAGGGCGGCTTCTCCGGCCGCCGCACGCCGGCGTTaGTCTTCTTGGCCTTGGTGGGGCCCGCCGCCGCGG | + |
|
Preference number: 6 (lower is better) Translates to: SRAASPAAARRR*SSWPWWGPPPR Trigger: CCGCGGCGGCGGGCCCCACCAAGGCCAAGAAGACCAACGCCGGCGTGCGGCGGCCGGAGAAGCCGCCCTACT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS CAA 72 bp | GGCTTCTCCGGCCGCCGCACGCCGGCGTTGGTCTTCTaGGCCTTGGTGGGGCCCGCCGCCGCGGGGTCCATG | + |
|
Preference number: 6 (lower is better) Translates to: GFSGRRTPALVF*ALVGPAAAGSM Trigger: CATGGACCCCGCGGCGGCGGGCCCCACCAAGGCCAAGAAGACCAACGCCGGCGTGCGGCGGCCGGAGAAGCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS CCA 72 bp | GCCGGCAGCAGCGGTGAAGCGGGCACCGAGCTGTCGTaGTGCGGGTACTCCCCGGCCGCAGAGCCACCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: AGSSGEAGTELS*CGYSPAAEPPQ Trigger: CTGCGGTGGCTCTGCGGCCGGGGAGTACCCGCACCACGACAGCTCGGTGCCCGCTTCACCGCTGCTGCCGGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS GCA 72 bp | GGCAGCAGCGGTGAAGCGGGCACCGAGCTGTCGTGGTaGGGGTACTCCCCGGCCGCAGAGCCACCGCAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: GSSGEAGTELSW*GYSPAAEPPQP Trigger: TGGCTGCGGTGGCTCTGCGGCCGGGGAGTACCCGCACCACGACAGCTCGGTGCCCGCTTCACCGCTGCTGCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS CCA 72 bp | GAGTGGCCGCCGTTGGAGGGCAGGTGTGGCACCGAGTaGCTGGGCAAAGCCATGCCGTCCACGTTGCCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: EWPPLEGRCGTE*LGKAMPSTLPA Trigger: GGCTGGCAACGTGGACGGCATGGCTTTGCCCAGCCACTCGGTGCCACACCTGCCCTCCAACGGCGGCCACTC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS CCA 72 bp | GGCCGCCGTTGGAGGGCAGGTGTGGCACCGAGTGGCTaGGCAAAGCCATGCCGTCCACGTTGCCAGCCAAAT | + |
|
Preference number: 6 (lower is better) Translates to: GRRWRAGVAPSG*AKPCRPRCQPN Trigger: ATTTGGCTGGCAACGTGGACGGCATGGCTTTGCCCAGCCACTCGGTGCCACACCTGCCCTCCAACGGCGGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS GCA 72 bp | TGCCGTCCACGTTGCCAGCCAAATGGCCATTCATCATaGCCAAGCCGCCCTCCAGCGCCAGGCTGTTGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: CRPRCQPNGHSS*PSRPPAPGCWA Trigger: CGCCCAACAGCCTGGCGCTGGAGGGCGGCTTGGGCATGATGAATGGCCATTTGGCTGGCAACGTGGACGGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS GCA 72 bp | GAAGGTATGGCTGCTCCAGGGAGTGCGTGGAGATGCTaGCAGACAGGGGGTTGGCGGCTGGGTTGCAAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: EGMAAPGSAWRC*QTGGWRLGCKG Trigger: CCCCTTGCAACCCAGCCGCCAACCCCCTGTCTGGCAGCATCTCCACGCACTCCCTGGAGCAGCCATACCTTC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS CCA 72 bp | CCAGGGAGTGCGTGGAGATGCTGCCAGACAGGGGGTTaGCGGCTGGGTTGCAAGGGGACAGAGGCTGTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: PGSAWRCCQTGG*RLGCKGTEAVA Trigger: AGCAACAGCCTCTGTCCCCTTGCAACCCAGCCGCCAACCCCCTGTCTGGCAGCATCTCCACGCACTCCCTGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS CAA 90 bp | GGCAGGTGTGGCACCGAGTGGCTGGGCAAAGCCATGCCGTCCACGTaGCCAGCCAAATGGCCATTCATCATGCCCAAGCCGCCCTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GRCGTEWLGKAMPST*PAKWPFIMPKPPSS Trigger: GCTGGAGGGCGGCTTGGGCATGATGAATGGCCATTTGGCTGGCAACGTGGACGGCATGGCTTTGCCCAGCCACTCGGTGCCACACCTGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS TCA 72 bp | CGGAGCCCTGGAAGCCGTAGGTGTCGGGGAGGTGGTTaGAGCCCAGCCCGTTCACCATGCTGTACACAGGCT | + |
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Preference number: 6 (lower is better) Translates to: RSPGSRRCRGGG*SPARSPCCTQA Trigger: AGCCTGTGTACAGCATGGTGAACGGGCTGGGCTTCAACCACCTCCCCGACACCTACGGCTTCCAGGGCTCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS GCA 72 bp | GGTGAAGGTATGGCTGCTCCAGGGAGTGCGTGGAGATaGTGCCAGACAGGGGGTTGGCGGCTGGGTTGCAAG | + |
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Preference number: 6 (lower is better) Translates to: GEGMAAPGSAWR*CQTGGWRLGCK Trigger: CTTGCAACCCAGCCGCCAACCCCCTGTCTGGCAGCATCTCCACGCACTCCCTGGAGCAGCCATACCTTCACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS CCA 72 bp | CTGGGCAAAGCCATGCCGTCCACGTTGCCAGCCAAATaGCCATTCATCATGCCCAAGCCGCCCTCCAGCGCC | + |
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Preference number: 6 (lower is better) Translates to: LGKAMPSTLPAK*PFIMPKPPSSA Trigger: GGCGCTGGAGGGCGGCTTGGGCATGATGAATGGCCATTTGGCTGGCAACGTGGACGGCATGGCTTTGCCCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS GCA 72 bp | GCACCGAGTGGCTGGGCAAAGCCATGCCGTCCACGTTaGCAGCCAAATGGCCATTCATCATGCCCAAGCCGC | + |
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Preference number: 6 (lower is better) Translates to: APSGWAKPCRPR*QPNGHSSCPSR Trigger: GCGGCTTGGGCATGATGAATGGCCATTTGGCTGGCAACGTGGACGGCATGGCTTTGCCCAGCCACTCGGTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS CAA 72 bp | GGCACCGAGTGGCTGGGCAAAGCCATGCCGTCCACGTaGCCAGCCAAATGGCCATTCATCATGCCCAAGCCG | + |
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Preference number: 6 (lower is better) Translates to: GTEWLGKAMPST*PAKWPFIMPKP Trigger: CGGCTTGGGCATGATGAATGGCCATTTGGCTGGCAACGTGGACGGCATGGCTTTGCCCAGCCACTCGGTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS CCA 72 bp | TGTTTTGGTGAAGGTATGGCTGCTCCAGGGAGTGCGTaGAGATGCTGCCAGACAGGGGGTTGGCGGCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: CFGEGMAAPGSA*RCCQTGGWRLG Trigger: ACCCAGCCGCCAACCCCCTGTCTGGCAGCATCTCCACGCACTCCCTGGAGCAGCCATACCTTCACCAAAACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS TCA 72 bp | AACTCCTTTCTGTCACACATGCTGGGCGACTGTGAGTaGTACCGAGGGATGCCTTGCAGTTCTGCCGGCCCG | + |
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Preference number: 6 (lower is better) Translates to: NSFLSHMLGDCE*YRGMPCSSAGP Trigger: CGGGCCGGCAGAACTGCAAGGCATCCCTCGGTATCACTCACAGTCGCCCAGCATGTGTGACAGAAAGGAGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS CCA 72 bp | TTCTGCCGGCCCGTTGTGACTGTTTTGGTGAAGGTATaGCTGCTCCAGGGAGTGCGTGGAGATGCTGCCAGA | + |
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Preference number: 6 (lower is better) Translates to: FCRPVVTVLVKV*LLQGVRGDAAR Trigger: TCTGGCAGCATCTCCACGCACTCCCTGGAGCAGCCATACCTTCACCAAAACAGTCACAACGGGCCGGCAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS GCA 72 bp | CACACATGCTGGGCGACTGTGAGTGATACCGAGGGATaGCTTGCAGTTCTGCCGGCCCGTTGTGACTGTTTT | + |
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Preference number: 6 (lower is better) Translates to: HTCWATVSDTEG*LAVLPARCDCF Trigger: AAAACAGTCACAACGGGCCGGCAGAACTGCAAGGCATCCCTCGGTATCACTCACAGTCGCCCAGCATGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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| CDS TCA 72 bp | GACAAACTCCTTTCTGTCACACATGCTGGGCGACTGTaGGTGATACCGAGGGATGCCTTGCAGTTCTGCCGG | + |
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Preference number: 6 (lower is better) Translates to: DKLLSVTHAGRL*VIPRDALQFCR Trigger: CCGGCAGAACTGCAAGGCATCCCTCGGTATCACTCACAGTCGCCCAGCATGTGTGACAGAAAGGAGTTTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181504.2 |
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