Pregenerated sensors for FOXE3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044518Ensembl transcript IDs: ENSMUST00000050940.4
Found 2 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
CDS GCA 90 bp | GCGCAGCAAGGCGGCTCGGGCGCCACGGGTCCCGGCGGCTCAGGCTaGAAGCCCAACAGGCTGTCCAGGCGGAAGAGGCGCGCGGGCGGA | + |
Preference number: 5 (lower is better) Translates to: AQQGGSGATGPGGSG*KPNRLSRRKRRAGG Trigger: TCCGCCCGCGCGCCTCTTCCGCCTGGACAGCCTGTTGGGCTTGCAGCCTGAGCCGCCGGGACCCGTGGCGCCCGAGCCGCCTTGCTGCGC 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050940.4 |
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CDS GCA 72 bp | GGCGGCTCGGGCGCCACGGGTCCCGGCGGCTCAGGCTaGAAGCCCAACAGGCTGTCCAGGCGGAAGAGGCGC | + |
Preference number: 6 (lower is better) Translates to: GGSGATGPGGSG*KPNRLSRRKRR Trigger: GCGCCTCTTCCGCCTGGACAGCCTGTTGGGCTTGCAGCCTGAGCCGCCGGGACCCGTGGCGCCCGAGCCGCC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050940.4 |