Pregenerated sensors for FOXC2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046714Ensembl transcript IDs: ENSMUST00000054691.8
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AATCCGCACTCGTTTACAGAAGGCACCTTATCCGGAGAGACCTCTTaGGCCCGTGGAGAATCTCCACAGAAGTCATTAGGGGTCCCTATG | + |
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Preference number: 1 (lower is better) Translates to: NPHSFTEGTLSGETS*ARGESPQKSLGVPM Trigger: CATAGGGACCCCTAATGACTTCTGTGGAGATTCTCCACGGGCGCAAGAGGTCTCTCCGGATAAGGTGCCTTCTGTAAACGAGTGCGGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| 3UTR CCA 90 bp | ACTTTAAATATTATATTAAAGGCTCTGGGCAAGAACAAAATAGCCTaGTTACAAATCCGCACTCGTTTACAGAAGGCACCTTATCCGGAG | + |
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Preference number: 1 (lower is better) Translates to: TLNIILKALGKNKIA*LQIRTRLQKAPYPE Trigger: CTCCGGATAAGGTGCCTTCTGTAAACGAGTGCGGATTTGTAACCAGGCTATTTTGTTCTTGCCCAGAGCCTTTAATATAATATTTAAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| 3UTR-3UTR GCA 90 bp | CCACACACGTTTCTTGAATTCAATTTGGCAGTAACAGTTGGGCAAGACGAAACCAGGAGGCGAAGCCGGTaGGGTCCTGGGGCTGGAGCG | + |
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Preference number: 2 (lower is better) Translates to: PHTFLEFNLAVTVGQDETRRRSR*GPGAGA Trigger: CGCTCCAGCCCCAGGACCGCACCGGCTTCGCCTCCT...GGTTTCGTCTTGCCCAACTGTTACTGCCAAATTGAATTCAAGAAACGTGTGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| 3UTR CAA 90 bp | AAATCCGCACTCGTTTACAGAAGGCACCTTATCCGGAGAGACCTCTaGCGCCCGTGGAGAATCTCCACAGAAGTCATTAGGGGTCCCTAT | + |
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Preference number: 2 (lower is better) Translates to: KSALVYRRHLIRRDL*RPWRISTEVIRGPY Trigger: ATAGGGACCCCTAATGACTTCTGTGGAGATTCTCCACGGGCGCAAGAGGTCTCTCCGGATAAGGTGCCTTCTGTAAACGAGTGCGGATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| 3UTR-3UTR TCA 90 bp | CCACACACGTTTCTTGAATTCAATTTGGCAGTAACAGTTGGGCAAGACGAAACCCTTAGAGGGACTCGCTaGGATCTCAAACTGAGCTGC | + |
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Preference number: 2 (lower is better) Translates to: PHTFLEFNLAVTVGQDETLRGTR*DLKLSC Trigger: GCAGCTCAGTTTGAGATCTCAGCGAGTCCCTCTAAG...GGTTTCGTCTTGCCCAACTGTTACTGCCAAATTGAATTCAAGAAACGTGTGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| 3UTR TCA 72 bp | ACCTGCGAGTTGCACGGAGCTCTCTGCTCCTGGTTCTaGGAGAGGGGCGCTTTCCGTCGCTTTCTGCGGCTC | + |
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Preference number: 3 (lower is better) Translates to: TCELHGALCSWF*ERGAFRRFLRL Trigger: GAGCCGCAGAAAGCGACGGAAAGCGCCCCTCTCTCAGAACCAGGAGCAGAGAGCTCCGTGCAACTCGCAGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| 3UTR GCA 72 bp | CCTGGTTCTGAGAGAGGGGCGCTTTCCGTCGCTTTCTaGGGCTCCGTCGAAGAAGGTTCCCATGGAGGAGGC | + |
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Preference number: 3 (lower is better) Translates to: PGSERGALSVAF*GSVEEGSHGGG Trigger: GCCTCCTCCATGGGAACCTTCTTCGACGGAGCCGCAGAAAGCGACGGAAAGCGCCCCTCTCTCAGAACCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| 3UTR GCA 72 bp | TCGTTTACAGAAGGCACCTTATCCGGAGAGACCTCTTaGGCCCGTGGAGAATCTCCACAGAAGTCATTAGGG | + |
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Preference number: 3 (lower is better) Translates to: SFTEGTLSGETS*ARGESPQKSLG Trigger: CCCTAATGACTTCTGTGGAGATTCTCCACGGGCGCAAGAGGTCTCTCCGGATAAGGTGCCTTCTGTAAACGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| 3UTR CCA 72 bp | ATTATATTAAAGGCTCTGGGCAAGAACAAAATAGCCTaGTTACAAATCCGCACTCGTTTACAGAAGGCACCT | + |
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Preference number: 3 (lower is better) Translates to: IILKALGKNKIA*LQIRTRLQKAP Trigger: AGGTGCCTTCTGTAAACGAGTGCGGATTTGTAACCAGGCTATTTTGTTCTTGCCCAGAGCCTTTAATATAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS-3UTR CCA 90 bp | CCCATGGAGGAGGCGAAGCCGGTGCGGTCCTGGGGCTGGAGCGGACTGGACAGCTACCAGGAGGTGGCCTaGGTGGCGGGCTGCGGCGCG | + |
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Preference number: 4 (lower is better) Translates to: PMEEAKPVRSWGWSGLDSYQEVA*VAGCGA Trigger: CGCGCCGCAGCCCGCCACCCAGGCCACCTCCTGGTA...GCTGTCCAGTCCGCTCCAGCCCCAGGACCGCACCGGCTTCGCCTCCTCCATGGG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS-3UTR CCA 90 bp | CCCATGGAGGAGGCGAAGCCGGTGCGGTCCTGGGGCTGGAGCGGACTGGACAGCGGGAACCTGCGGGCGTaGAGGATGCGCTGCGCGGAC | + |
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Preference number: 4 (lower is better) Translates to: PMEEAKPVRSWGWSGLDSGNLRA*RMRCAD Trigger: GTCCGCGCAGCGCATCCTCCACGCCCGCAGGTTCCC...GCTGTCCAGTCCGCTCCAGCCCCAGGACCGCACCGGCTTCGCCTCCTCCATGGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS-3UTR CCA 90 bp | CGGCTCCGTCGAAGAAGGTTCCCATGGAGGAGGCGAAGCCGGTGCGGTCCTGGGGTGTGGCCGGGGAGGTaGCTCAGGTCCCCGCCGTGG | + |
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Preference number: 4 (lower is better) Translates to: RLRRRRFPWRRRSRCGPGVWPGR*LRSPPW Trigger: CCACGGCGGGGACCTGAGCCACCTCCCCGGCCACAC...CCCAGGACCGCACCGGCTTCGCCTCCTCCATGGGAACCTTCTTCGACGGAGCCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS-3UTR GCA 90 bp | TCGAAGAAGGTTCCCATGGAGGAGGCGAAGCCGGTGCGGTCCTGGGGCTGGAGCCCATGGGGCTGGCCATaGCGCCGTAGCTGCCGGCCG | + |
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Preference number: 4 (lower is better) Translates to: SKKVPMEEAKPVRSWGWSPWGWP*RRSCRP Trigger: CGGCCGGCAGCTACGGCGGCATGGCCAGCCCCATGG...GCTCCAGCCCCAGGACCGCACCGGCTTCGCCTCCTCCATGGGAACCTTCTTCGA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS-3UTR CCA 90 bp | CGGCTCCGTCGAAGAAGGTTCCCATGGAGGAGGCGAAGCCGGTGCGGTCCTGGGCGGAGTAGACGCCCATaGGGCTGGCCATGCCGCCGT | + |
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Preference number: 4 (lower is better) Translates to: RLRRRRFPWRRRSRCGPGRSRRP*GWPCRR Trigger: ACGGCGGCATGGCCAGCCCCATGGGCGTCTACTCCG...CCCAGGACCGCACCGGCTTCGCCTCCTCCATGGGAACCTTCTTCGACGGAGCCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS-3UTR CCA 90 bp | CCGTCGCTTTCTGCGGCTCCGTCGAAGAAGGTTCCCATGGAGGAGGCGAAGCCGCCGGGGCCGCTCGGGTaGTCCGACAGAGCCTCGTCC | + |
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Preference number: 4 (lower is better) Translates to: PSLSAAPSKKVPMEEAKPPGPLG*SDRASS Trigger: GGACGAGGCTCTGTCGGACCACCCGAGCGGCCCCGG...CGGCTTCGCCTCCTCCATGGGAACCTTCTTCGACGGAGCCGCAGAAAGCGACGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS-3UTR GCA 90 bp | CGGCTCCGTCGAAGAAGGTTCCCATGGAGGAGGCGAAGCCGGTGCGGTCCTGGGTGCGGCGTATGGCAGTaGCAGCGGTGGCACCACCAG | + |
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Preference number: 4 (lower is better) Translates to: RLRRRRFPWRRRSRCGPGCGVWQ*QRWHHQ Trigger: CTGGTGGTGCCACCGCTGGCACTGCCATACGCCGCA...CCCAGGACCGCACCGGCTTCGCCTCCTCCATGGGAACCTTCTTCGACGGAGCCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS-3UTR CCA 90 bp | TCGAAGAAGGTTCCCATGGAGGAGGCGAAGCCGGTGCGGTCCTGGGGCTGGAGCGCTTCACCAGGTCCTTaGGCGCCGCGGGCTGGTGGT | + |
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Preference number: 4 (lower is better) Translates to: SKKVPMEEAKPVRSWGWSASPGP*APRAGG Trigger: ACCACCAGCCCGCGGCGCCCAAGGACCTGGTGAAGC...GCTCCAGCCCCAGGACCGCACCGGCTTCGCCTCCTCCATGGGAACCTTCTTCGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS-3UTR CCA 90 bp | CCGTCGCTTTCTGCGGCTCCGTCGAAGAAGGTTCCCATGGAGGAGGCGAAGCCGCTGTCGGAGCGCCCTTaGCCGTGGTCGAGGGCGGCT | + |
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Preference number: 4 (lower is better) Translates to: PSLSAAPSKKVPMEEAKPLSERP*PWSRAA Trigger: AGCCGCCCTCGACCACGGCCAAGGGCGCTCCGACAG...CGGCTTCGCCTCCTCCATGGGAACCTTCTTCGACGGAGCCGCAGAAAGCGACGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS-3UTR GCA 90 bp | CCCATGGAGGAGGCGAAGCCGGTGCGGTCCTGGGGCTGGAGCGGACTGGACAGCTCCAGTCCTAGCCGGTaGGAGTTGAACATCTCCCGG | + |
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Preference number: 4 (lower is better) Translates to: PMEEAKPVRSWGWSGLDSSSPSR*ELNISR Trigger: CCGGGAGATGTTCAACTCGCACCGGCTAGGACTGGA...GCTGTCCAGTCCGCTCCAGCCCCAGGACCGCACCGGCTTCGCCTCCTCCATGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS-3UTR CCA 90 bp | AGTTGCACGGAGCTCTCTGCTCCTGGTTCTGAGAGAGGGGCGCTTTCCGTCGCTTTAGGCGCCGCGGCGTaGTGCTCCGGCAGCGAGCCG | + |
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Preference number: 4 (lower is better) Translates to: SCTELSAPGSERGALSVALGAAA*CSGSEP Trigger: CGGCTCGCTGCCGGAGCACCACGCCGCGGCGCCTAA...AGCGACGGAAAGCGCCCCTCTCTCAGAACCAGGAGCAGAGAGCTCCGTGCAACT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS-3UTR CCA 90 bp | GGCTCCGTCGAAGAAGGTTCCCATGGAGGAGGCGAAGCCGGTGCGGTCCTGGGGCCACTCCCAGGGCGTTaGGGTCCGATACCGAGTAAC | + |
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Preference number: 4 (lower is better) Translates to: GSVEEGSHGGGEAGAVLGPLPGR*GPIPSN Trigger: GTTACTCGGTATCGGACCCCAACGCCCTGGGAGTGG...CCCCAGGACCGCACCGGCTTCGCCTCCTCCATGGGAACCTTCTTCGACGGAGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS-3UTR CCA 90 bp | CCCATGGAGGAGGCGAAGCCGGTGCGGTCCTGGGGCTGGAGCGGACTGGACAGCGGGAAAGTTTGCTGTTaGGTTGCAAACGTGTGGCCG | + |
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Preference number: 4 (lower is better) Translates to: PMEEAKPVRSWGWSGLDSGKVCC*VANVWP Trigger: CGGCCACACGTTTGCAACCCAACAGCAAACTTTCCC...GCTGTCCAGTCCGCTCCAGCCCCAGGACCGCACCGGCTTCGCCTCCTCCATGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS-3UTR CCA 90 bp | ACTGAGCTGCGGATAAGTTACCTGCGAGTTGCACGGAGCTCTCTGCTCCTGGTTATGCGCTGCGCGGACTaGCCTGCAGCGCTCCCTCGG | + |
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Preference number: 4 (lower is better) Translates to: TELRISYLRVARSSLLLVMRCAD*PAALPR Trigger: CCGAGGGAGCGCTGCAGGCCAGTCCGCGCAGCGCAT...AACCAGGAGCAGAGAGCTCCGTGCAACTCGCAGGTAACTTATCCGCAGCTCAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS-3UTR CCA 90 bp | ACTGAGCTGCGGATAAGTTACCTGCGAGTTGCACGGAGCTCTCTGCTCCTGGTTCGGCAGCGAGCCGTCTaGGGAACCTGCGGGCGTGGA | + |
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Preference number: 4 (lower is better) Translates to: TELRISYLRVARSSLLLVRQRAV*GTCGRG Trigger: TCCACGCCCGCAGGTTCCCCAGACGGCTCGCTGCCG...AACCAGGAGCAGAGAGCTCCGTGCAACTCGCAGGTAACTTATCCGCAGCTCAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS-3UTR TCA 90 bp | TCGCTGAGATCTCAAACTGAGCTGCGGATAAGTTACCTGCGAGTTGCACGGAGCCCCAACGCGCCCTCCTaGCCCGCTGCGAGGTTGAGG | + |
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Preference number: 4 (lower is better) Translates to: SLRSQTELRISYLRVARSPNAPS*PAARLR Trigger: CCTCAACCTCGCAGCGGGTCAGGAGGGCGCGTTGGG...GCTCCGTGCAACTCGCAGGTAACTTATCCGCAGCTCAGTTTGAGATCTCAGCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS-3UTR CCA 90 bp | TCGAAGAAGGTTCCCATGGAGGAGGCGAAGCCGGTGCGGTCCTGGGGCTGGAGCACATCTCCCGGACGTTaGGGAAAGTTTGCTGTTGGG | + |
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Preference number: 4 (lower is better) Translates to: SKKVPMEEAKPVRSWGWSTSPGR*GKFAVG Trigger: CCCAACAGCAAACTTTCCCCAACGTCCGGGAGATGT...GCTCCAGCCCCAGGACCGCACCGGCTTCGCCTCCTCCATGGGAACCTTCTTCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS-3UTR TCA 90 bp | ACTGAGCTGCGGATAAGTTACCTGCGAGTTGCACGGAGCTCTCTGCTCCTGGTTGCACATCCTTCTTCTTaGAGCGCCGCCGCCGCCGCA | + |
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Preference number: 4 (lower is better) Translates to: TELRISYLRVARSSLLLVAHPSS*SAAAAA Trigger: TGCGGCGGCGGCGGCGCTTCAAGAAGAAGGATGTGC...AACCAGGAGCAGAGAGCTCCGTGCAACTCGCAGGTAACTTATCCGCAGCTCAGT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS-3UTR GCA 90 bp | CGGCTCCGTCGAAGAAGGTTCCCATGGAGGAGGCGAAGCCGGTGCGGTCCTGGGACGTTGGGGAAAGTTTaGTGTTGGGTTGCAAACGTG | + |
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Preference number: 4 (lower is better) Translates to: RLRRRRFPWRRRSRCGPGTLGKV*CWVANV Trigger: CACGTTTGCAACCCAACAGCAAACTTTCCCCAACGT...CCCAGGACCGCACCGGCTTCGCCTCCTCCATGGGAACCTTCTTCGACGGAGCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS-3UTR CCA 90 bp | TCGCTGAGATCTCAAACTGAGCTGCGGATAAGTTACCTGCGAGTTGCACGGAGCAGACGCCCATGGGGCTaGCCATGCCGCCGTAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: SLRSQTELRISYLRVARSRRPWG*PCRRSC Trigger: GCAGCTACGGCGGCATGGCCAGCCCCATGGGCGTCT...GCTCCGTGCAACTCGCAGGTAACTTATCCGCAGCTCAGTTTGAGATCTCAGCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS-3UTR GCA 90 bp | AGTTGCACGGAGCTCTCTGCTCCTGGTTCTGAGAGAGGGGCGCTTTCCGTCGCTAGTTTGCTGTTGGGTTaGAAACGTGTGGCCGGGGAG | + |
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Preference number: 4 (lower is better) Translates to: SCTELSAPGSERGALSVASLLLG*KRVAGE Trigger: CTCCCCGGCCACACGTTTGCAACCCAACAGCAAACT...AGCGACGGAAAGCGCCCCTCTCTCAGAACCAGGAGCAGAGAGCTCCGTGCAACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS-3UTR CCA 90 bp | ACTGAGCTGCGGATAAGTTACCTGCGAGTTGCACGGAGCTCTCTGCTCCTGGTTCTCGCATTGCTCACCTaGGACTCCCCGAGGGACGAG | + |
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Preference number: 4 (lower is better) Translates to: TELRISYLRVARSSLLLVLALLT*DSPRDE Trigger: CTCGTCCCTCGGGGAGTCCCAGGTGAGCAATGCGAG...AACCAGGAGCAGAGAGCTCCGTGCAACTCGCAGGTAACTTATCCGCAGCTCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS-3UTR GCA 90 bp | TCGCTGAGATCTCAAACTGAGCTGCGGATAAGTTACCTGCGAGTTGCACGGAGCGCTGACAGCTCGCATTaGTCACCTGGGACTCCCCGA | + |
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Preference number: 4 (lower is better) Translates to: SLRSQTELRISYLRVARSADSSH*SPGTPR Trigger: TCGGGGAGTCCCAGGTGAGCAATGCGAGCTGTCAGC...GCTCCGTGCAACTCGCAGGTAACTTATCCGCAGCTCAGTTTGAGATCTCAGCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS-3UTR GCA 90 bp | TGGTGTGTTTTTGGAATACCCCAGATGGCATCTACTGTACAAAGCCATGCACTTCGTAGGAGCGGCCCATaGCGGCGCCGTACTGCTCCG | + |
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Preference number: 4 (lower is better) Translates to: WCVFGIPQMASTVQSHALRRSGP*RRRTAP Trigger: CGGAGCAGTACGGCGCCGGCATGGGCCGCTCCTACG...AAGTGCATGGCTTTGTACAGTAGATGCCATCTGGGGTATTCCAAAAACACACCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS-3UTR GCA 90 bp | CCACACACGTTTCTTGAATTCAATTTGGCAGTAACAGTTGGGCAAGACGAAACCGCGTGGAGGATGCGCTaGGCGGACTGGCCTGCAGCG | + |
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Preference number: 4 (lower is better) Translates to: PHTFLEFNLAVTVGQDETAWRMR*ADWPAA Trigger: CGCTGCAGGCCAGTCCGCGCAGCGCATCCTCCACGC...GGTTTCGTCTTGCCCAACTGTTACTGCCAAATTGAATTCAAGAAACGTGTGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS-3UTR GCA 90 bp | CACACGTTTCTTGAATTCAATTTGGCAGTAACAGTTGGGCAAGACGAAACCTTATGCGGGCGTGGAGGATaGGCTGCGCGGACTGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: HTFLEFNLAVTVGQDETLCGRGG*AARTGL Trigger: CAGGCCAGTCCGCGCAGCGCATCCTCCACGCCCGCA...TAAGGTTTCGTCTTGCCCAACTGTTACTGCCAAATTGAATTCAAGAAACGTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS-3UTR GCA 90 bp | CACACGTTTCTTGAATTCAATTTGGCAGTAACAGTTGGGCAAGACGAAACCTTAGCCCTCCTGACCCGCTaGGAGGTTGAGGGCGCCGAG | + |
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Preference number: 4 (lower is better) Translates to: HTFLEFNLAVTVGQDETLALLTR*EVEGAE Trigger: CTCGGCGCCCTCAACCTCGCAGCGGGTCAGGAGGGC...TAAGGTTTCGTCTTGCCCAACTGTTACTGCCAAATTGAATTCAAGAAACGTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS-3UTR CCA 90 bp | TGGTGTGTTTTTGGAATACCCCAGATGGCATCTACTGTACAAAGCCATGCACTTTCTTCTCGGCCTCCTTaGGCCCGTCAGCTACCGGGG | + |
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Preference number: 4 (lower is better) Translates to: WCVFGIPQMASTVQSHALSSRPP*ARQLPG Trigger: CCCCGGTAGCTGACGGGCCCAAGGAGGCCGAGAAGA...AAGTGCATGGCTTTGTACAGTAGATGCCATCTGGGGTATTCCAAAAACACACCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| 3UTR CAA 72 bp | CTCGTTTACAGAAGGCACCTTATCCGGAGAGACCTCTaGCGCCCGTGGAGAATCTCCACAGAAGTCATTAGG | + |
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Preference number: 4 (lower is better) Translates to: LVYRRHLIRRDL*RPWRISTEVIR Trigger: CCTAATGACTTCTGTGGAGATTCTCCACGGGCGCAAGAGGTCTCTCCGGATAAGGTGCCTTCTGTAAACGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS-3UTR GCA 90 bp | CACACGTTTCTTGAATTCAATTTGGCAGTAACAGTTGGGCAAGACGAAACCTTACCATGCCGCCGTAGCTaGCGGCCGCCCGGTAGTAGT | + |
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Preference number: 4 (lower is better) Translates to: HTFLEFNLAVTVGQDETLPCRRS*RPPGSS Trigger: ACTACTACCGGGCGGCCGGCAGCTACGGCGGCATGG...TAAGGTTTCGTCTTGCCCAACTGTTACTGCCAAATTGAATTCAAGAAACGTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS-3UTR CCA 90 bp | CCACACACGTTTCTTGAATTCAATTTGGCAGTAACAGTTGGGCAAGACGAAACCTGGGTTGCAAACGTGTaGCCGGGGAGGTGGCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: PHTFLEFNLAVTVGQDETWVANV*PGRWLR Trigger: CCTGAGCCACCTCCCCGGCCACACGTTTGCAACCCA...GGTTTCGTCTTGCCCAACTGTTACTGCCAAATTGAATTCAAGAAACGTGTGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS-3UTR CCA 90 bp | CCACACACGTTTCTTGAATTCAATTTGGCAGTAACAGTTGGGCAAGACGAAACCCTCAGGTCCCCGCCGTaGTTCAGATACCAGGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: PHTFLEFNLAVTVGQDETLRSPP*FRYQEV Trigger: CACCTCCTGGTATCTGAACCACGGCGGGGACCTGAG...GGTTTCGTCTTGCCCAACTGTTACTGCCAAATTGAATTCAAGAAACGTGTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS-3UTR GCA 90 bp | CACACGTTTCTTGAATTCAATTTGGCAGTAACAGTTGGGCAAGACGAAACCTTAGTAAGAGTAGGGGGCTaGGTGGCGGTAGAGGGACGG | + |
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Preference number: 4 (lower is better) Translates to: HTFLEFNLAVTVGQDETLVRVGG*VAVEGR Trigger: CCGTCCCTCTACCGCCACGCAGCCCCCTACTCTTAC...TAAGGTTTCGTCTTGCCCAACTGTTACTGCCAAATTGAATTCAAGAAACGTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS CCA 90 bp | CTGCGCGCACGGCTGCGTGTAAGCGGCGGGTGGCGCTGCGGCGTATaGCAGTGCCAGCGGTGGCACCACCAGGCCGGCGCGCGCGGCCGC | + |
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Preference number: 5 (lower is better) Translates to: LRARLRVSGGWRCGV*QCQRWHHQAGARGR Trigger: GCGGCCGCGCGCGCCGGCCTGGTGGTGCCACCGCTGGCACTGCCATACGCCGCAGCGCCACCCGCCGCTTACACGCAGCCGTGCGCGCAG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS GCA 90 bp | GCACGGCTGCGTGTAAGCGGCGGGTGGCGCTGCGGCGTATGGCAGTaGCAGCGGTGGCACCACCAGGCCGGCGCGCGCGGCCGCTGGGCT | + |
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Preference number: 5 (lower is better) Translates to: ARLRVSGGWRCGVWQ*QRWHHQAGARGRWA Trigger: AGCCCAGCGGCCGCGCGCGCCGGCCTGGTGGTGCCACCGCTGGCACTGCCATACGCCGCAGCGCCACCCGCCGCTTACACGCAGCCGTGC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS GCA 90 bp | AGGCGCCGCGGCGTGGTGCTCCGGCAGCGAGCCGTCTGGGGAACCTaGGGGCGTGGAGGATGCGCTGCGCGGACTGGCCTGCAGCGCTCC | + |
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Preference number: 5 (lower is better) Translates to: RRRGVVLRQRAVWGT*GRGGCAARTGLQRS Trigger: GGAGCGCTGCAGGCCAGTCCGCGCAGCGCATCCTCCACGCCCGCAGGTTCCCCAGACGGCTCGCTGCCGGAGCACCACGCCGCGGCGCCT 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS GCA 90 bp | CTCCAGGCCCTGCGCGCACGGCTGCGTGTAAGCGGCGGGTGGCGCTaGGGCGTATGGCAGTGCCAGCGGTGGCACCACCAGGCCGGCGCG | + |
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Preference number: 5 (lower is better) Translates to: LQALRARLRVSGGWR*GVWQCQRWHHQAGA Trigger: CGCGCCGGCCTGGTGGTGCCACCGCTGGCACTGCCATACGCCGCAGCGCCACCCGCCGCTTACACGCAGCCGTGCGCGCAGGGCCTGGAG 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS CCA 90 bp | CGGCGTGGTGCTCCGGCAGCGAGCCGTCTGGGGAACCTGCGGGCGTaGAGGATGCGCTGCGCGGACTGGCCTGCAGCGCTCCCTCGGGGC | + |
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Preference number: 5 (lower is better) Translates to: RRGAPAASRLGNLRA*RMRCADWPAALPRG Trigger: GCCCCGAGGGAGCGCTGCAGGCCAGTCCGCGCAGCGCATCCTCCACGCCCGCAGGTTCCCCAGACGGCTCGCTGCCGGAGCACCACGCCG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS CCA 90 bp | GCTGCGAGGTTGAGGGCGCCGAGCGGGGAGCCGGGGCCGCTCGGGTaGTCCGACAGAGCCTCGTCCAGCGCGGGCGGAACGCACACGTGC | + |
|
Preference number: 5 (lower is better) Translates to: AARLRAPSGEPGPLG*SDRASSSAGGTHTC Trigger: GCACGTGTGCGTTCCGCCCGCGCTGGACGAGGCTCTGTCGGACCACCCGAGCGGCCCCGGCTCCCCGCTCGGCGCCCTCAACCTCGCAGC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS GCA 90 bp | TGGGCGCCGCGGGCTGGTGGTGGTAGGGCGCGTAGGAGCGGCCCATaGCGGCGCCGTACTGCTCCGGGTGGCCGGAGTAGACGCCCATGG | + |
|
Preference number: 5 (lower is better) Translates to: WAPRAGGGRARRSGP*RRRTAPGGRSRRPW Trigger: CCATGGGCGTCTACTCCGGCCACCCGGAGCAGTACGGCGCCGGCATGGGCCGCTCCTACGCGCCCTACCACCACCAGCCCGCGGCGCCCA 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS CCA 90 bp | CAGCCCGTTAGGCGCCGCGGCGTGGTGCTCCGGCAGCGAGCCGTCTaGGGAACCTGCGGGCGTGGAGGATGCGCTGCGCGGACTGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: QPVRRRGVVLRQRAV*GTCGRGGCAARTGL Trigger: CAGGCCAGTCCGCGCAGCGCATCCTCCACGCCCGCAGGTTCCCCAGACGGCTCGCTGCCGGAGCACCACGCCGCGGCGCCTAACGGGCTG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS CCA 90 bp | TGGCAGTGCCAGCGGTGGCACCACCAGGCCGGCGCGCGCGGCCGCTaGGCTCAGATCGCCGCCCGGAGGCGACGTGCGCAGCGTCATGAT | + |
|
Preference number: 5 (lower is better) Translates to: WQCQRWHHQAGARGR*AQIAARRRRAQRHD Trigger: ATCATGACGCTGCGCACGTCGCCTCCGGGCGGCGATCTGAGCCCAGCGGCCGCGCGCGCCGGCCTGGTGGTGCCACCGCTGGCACTGCCA 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS CCA 90 bp | CGCAGCCTCCAGGCCCTGCGCGCACGGCTGCGTGTAAGCGGCGGGTaGCGCTGCGGCGTATGGCAGTGCCAGCGGTGGCACCACCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RSLQALRARLRVSGG*RCGVWQCQRWHHQA Trigger: GGCCTGGTGGTGCCACCGCTGGCACTGCCATACGCCGCAGCGCCACCCGCCGCTTACACGCAGCCGTGCGCGCAGGGCCTGGAGGCTGCG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS GCA 90 bp | CCGGCAGCGAGCCGTCTGGGGAACCTGCGGGCGTGGAGGATGCGCTaGGCGGACTGGCCTGCAGCGCTCCCTCGGGGCTCAGCGTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PAASRLGNLRAWRMR*ADWPAALPRGSASP Trigger: TGGAGACGCTGAGCCCCGAGGGAGCGCTGCAGGCCAGTCCGCGCAGCGCATCCTCCACGCCCGCAGGTTCCCCAGACGGCTCGCTGCCGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS GCA 90 bp | GTGCTCCGGCAGCGAGCCGTCTGGGGAACCTGCGGGCGTGGAGGATaGGCTGCGCGGACTGGCCTGCAGCGCTCCCTCGGGGCTCAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: VLRQRAVWGTCGRGG*AARTGLQRSLGAQR Trigger: ACGCTGAGCCCCGAGGGAGCGCTGCAGGCCAGTCCGCGCAGCGCATCCTCCACGCCCGCAGGTTCCCCAGACGGCTCGCTGCCGGAGCAC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS GCA 90 bp | GTCTCCACGCTGAAGCCGGGCAGCCCGTTAGGCGCCGCGGCGTGGTaGTCCGGCAGCGAGCCGTCTGGGGAACCTGCGGGCGTGGAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: VSTLKPGSPLGAAAW*SGSEPSGEPAGVED Trigger: ATCCTCCACGCCCGCAGGTTCCCCAGACGGCTCGCTGCCGGAGCACCACGCCGCGGCGCCTAACGGGCTGCCCGGCTTCAGCGTGGAGAC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS CCA 90 bp | CCATGCCGGCGCCGTACTGCTCCGGGTGGCCGGAGTAGACGCCCATaGGGCTGGCCATGCCGCCGTAGCTGCCGGCCGCCCGGTAGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: PCRRRTAPGGRSRRP*GWPCRRSCRPPGSS Trigger: ACTACTACCGGGCGGCCGGCAGCTACGGCGGCATGGCCAGCCCCATGGGCGTCTACTCCGGCCACCCGGAGCAGTACGGCGCCGGCATGG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS CCA 90 bp | ATGGTCTCCACGCTGAAGCCGGGCAGCCCGTTAGGCGCCGCGGCGTaGTGCTCCGGCAGCGAGCCGTCTGGGGAACCTGCGGGCGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: MVSTLKPGSPLGAAA*CSGSEPSGEPAGVE Trigger: CTCCACGCCCGCAGGTTCCCCAGACGGCTCGCTGCCGGAGCACCACGCCGCGGCGCCTAACGGGCTGCCCGGCTTCAGCGTGGAGACCAT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS GCA 90 bp | GGGTGGTCCGACAGAGCCTCGTCCAGCGCGGGCGGAACGCACACGTaGGCGGGCCGCTCGGCCCCGGTGTACAGACTCATAGCCCGCATA | + |
|
Preference number: 5 (lower is better) Translates to: GWSDRASSSAGGTHT*AGRSAPVYRLIARI Trigger: TATGCGGGCTATGAGTCTGTACACCGGGGCCGAGCGGCCCGCGCACGTGTGCGTTCCGCCCGCGCTGGACGAGGCTCTGTCGGACCACCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS CCA 90 bp | CGGCGCCGTACTGCTCCGGGTGGCCGGAGTAGACGCCCATGGGGCTaGCCATGCCGCCGTAGCTGCCGGCCGCCCGGTAGTAGTTTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: RRRTAPGGRSRRPWG*PCRRSCRPPGSSFA Trigger: AGCAAAACTACTACCGGGCGGCCGGCAGCTACGGCGGCATGGCCAGCCCCATGGGCGTCTACTCCGGCCACCCGGAGCAGTACGGCGCCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS GCA 90 bp | TCTGGGGAACCTGCGGGCGTGGAGGATGCGCTGCGCGGACTGGCCTaGAGCGCTCCCTCGGGGCTCAGCGTCTCCACCTTGGTGATGACC | + |
|
Preference number: 5 (lower is better) Translates to: SGEPAGVEDALRGLA*SAPSGLSVSTLVMT Trigger: GGTCATCACCAAGGTGGAGACGCTGAGCCCCGAGGGAGCGCTGCAGGCCAGTCCGCGCAGCGCATCCTCCACGCCCGCAGGTTCCCCAGA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS GCA 90 bp | CGTACTGCTCCGGGTGGCCGGAGTAGACGCCCATGGGGCTGGCCATaGCGCCGTAGCTGCCGGCCGCCCGGTAGTAGTTTTGCTCACTCA | + |
|
Preference number: 5 (lower is better) Translates to: RTAPGGRSRRPWGWP*RRSCRPPGSSFAHS Trigger: TGAGTGAGCAAAACTACTACCGGGCGGCCGGCAGCTACGGCGGCATGGCCAGCCCCATGGGCGTCTACTCCGGCCACCCGGAGCAGTACG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS-3UTR CAA 90 bp | GGCTCCGTCGAAGAAGGTTCCCATGGAGGAGGCGAAGCCGGTGCGGTCCTGGGGCCCTTGCCCGGCTTCTaGTCGTCGCGCGGCACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: GSVEEGSHGGGEAGAVLGPLPGF*SSRGTF Trigger: GAAAGTGCCGCGCGACGACAAGAAGCCGGGCAAGGG...CCCCAGGACCGCACCGGCTTCGCCTCCTCCATGGGAACCTTCTTCGACGGAGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS-3UTR CAA 90 bp | CGGCTCCGTCGAAGAAGGTTCCCATGGAGGAGGCGAAGCCGGTGCGGTCCTGGGTGGGCCCGCTCCTCCTaGTCCTTGGGCACATCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RLRRRRFPWRRRSRCGPGWARSS*SLGTSF Trigger: GAAGGATGTGCCCAAGGACAAGGAGGAGCGGGCCCA...CCCAGGACCGCACCGGCTTCGCCTCCTCCATGGGAACCTTCTTCGACGGAGCCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS-3UTR CAA 90 bp | AGTTGCACGGAGCTCTCTGCTCCTGGTTCTGAGAGAGGGGCGCTTTCCGTCGCTGTCGAGGGCGGCTCCTaGAGGTGGGCCCGCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SCTELSAPGSERGALSVAVEGGS*RWARSS Trigger: GGAGGAGCGGGCCCACCTCAAGGAGCCGCCCTCGAC...AGCGACGGAAAGCGCCCCTCTCTCAGAACCAGGAGCAGAGAGCTCCGTGCAACT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS GCA 90 bp | GGTGGCCGGAGTAGACGCCCATGGGGCTGGCCATGCCGCCGTAGCTaGCGGCCGCCCGGTAGTAGTTTTGCTCACTCAAATAGGGTACCA | + |
|
Preference number: 5 (lower is better) Translates to: GGRSRRPWGWPCRRS*RPPGSSFAHSNRVP Trigger: TGGTACCCTATTTGAGTGAGCAAAACTACTACCGGGCGGCCGGCAGCTACGGCGGCATGGCCAGCCCCATGGGCGTCTACTCCGGCCACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS GCA 90 bp | CCTAGCCGGTGCGAGTTGAACATCTCCCGGACGTTGGGGAAAGTTTaGTGTTGGGTTGCAAACGTGTGGCCGGGGAGGTGGCTCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PSRCELNISRTLGKV*CWVANVWPGRWLRS Trigger: GGACCTGAGCCACCTCCCCGGCCACACGTTTGCAACCCAACAGCAAACTTTCCCCAACGTCCGGGAGATGTTCAACTCGCACCGGCTAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS GCA 90 bp | CTCACCTGGGACTCCCCGAGGGACGAGTTGTCCAGTCCTAGCCGGTaGGAGTTGAACATCTCCCGGACGTTGGGGAAAGTTTGCTGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LTWDSPRDELSSPSR*ELNISRTLGKVCCW Trigger: CCAACAGCAAACTTTCCCCAACGTCCGGGAGATGTTCAACTCGCACCGGCTAGGACTGGACAACTCGTCCCTCGGGGAGTCCCAGGTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS-3UTR CAA 90 bp | CCGTCGCTTTCTGCGGCTCCGTCGAAGAAGGTTCCCATGGAGGAGGCGAAGCCGAACATCTCCCGGACGTaGGGGAAAGTTTGCTGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: PSLSAAPSKKVPMEEAKPNISRT*GKVCCW Trigger: CCAACAGCAAACTTTCCCCAACGTCCGGGAGATGTT...CGGCTTCGCCTCCTCCATGGGAACCTTCTTCGACGGAGCCGCAGAAAGCGACGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS TCA 90 bp | GGGACTCCCCGAGGGACGAGTTGTCCAGTCCTAGCCGGTGCGAGTTaGACATCTCCCGGACGTTGGGGAAAGTTTGCTGTTGGGTTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: GTPRGTSCPVLAGAS*TSPGRWGKFAVGLQ Trigger: TTGCAACCCAACAGCAAACTTTCCCCAACGTCCGGGAGATGTTCAACTCGCACCGGCTAGGACTGGACAACTCGTCCCTCGGGGAGTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS-3UTR CAA 90 bp | TCGCTGAGATCTCAAACTGAGCTGCGGATAAGTTACCTGCGAGTTGCACGGAGCTTCTTCTCGGCCTCCTaGGGCCCGTCAGCTACCGGG | + |
|
Preference number: 5 (lower is better) Translates to: SLRSQTELRISYLRVARSFFSAS*GPSATG Trigger: CCCGGTAGCTGACGGGCCCAAGGAGGCCGAGAAGAA...GCTCCGTGCAACTCGCAGGTAACTTATCCGCAGCTCAGTTTGAGATCTCAGCGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS-3UTR CAA 90 bp | TGGTGTGTTTTTGGAATACCCCAGATGGCATCTACTGTACAAAGCCATGCACTTGGCTTCACCAGGTCCTaGGGCGCCGCGGGCTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: WCVFGIPQMASTVQSHALGFTRS*GAAGWW Trigger: CCACCAGCCCGCGGCGCCCAAGGACCTGGTGAAGCC...AAGTGCATGGCTTTGTACAGTAGATGCCATCTGGGGTATTCCAAAAACACACCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS-3UTR CAA 90 bp | TCGCTGAGATCTCAAACTGAGCTGCGGATAAGTTACCTGCGAGTTGCACGGAGCAAGTTTGCTGTTGGGTaGCAAACGTGTGGCCGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SLRSQTELRISYLRVARSKFAVG*QTCGRG Trigger: TCCCCGGCCACACGTTTGCAACCCAACAGCAAACTT...GCTCCGTGCAACTCGCAGGTAACTTATCCGCAGCTCAGTTTGAGATCTCAGCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS-3UTR CAA 90 bp | CCACACACGTTTCTTGAATTCAATTTGGCAGTAACAGTTGGGCAAGACGAAACCCTCAGCGTCTCCACCTaGGTGATGACCGGCAGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: PHTFLEFNLAVTVGQDETLSVST*VMTGSA Trigger: CGCGCTGCCGGTCATCACCAAGGTGGAGACGCTGAG...GGTTTCGTCTTGCCCAACTGTTACTGCCAAATTGAATTCAAGAAACGTGTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS-3UTR CAA 90 bp | GACCCACACACGTTTCTTGAATTCAATTTGGCAGTAACAGTTGGGCAAGACGAACCTAGCCGGTGCGAGTaGAACATCTCCCGGACGTTG | + |
|
Preference number: 5 (lower is better) Translates to: DPHTFLEFNLAVTVGQDEPSRCE*NISRTL Trigger: CAACGTCCGGGAGATGTTCAACTCGCACCGGCTAGG...TTCGTCTTGCCCAACTGTTACTGCCAAATTGAATTCAAGAAACGTGTGTGGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS-3UTR CAA 90 bp | CACACGTTTCTTGAATTCAATTTGGCAGTAACAGTTGGGCAAGACGAAACCTTAGGGGAAAGTTTGCTGTaGGGTTGCAAACGTGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: HTFLEFNLAVTVGQDETLGESLL*GCKRVA Trigger: GGCCACACGTTTGCAACCCAACAGCAAACTTTCCCC...TAAGGTTTCGTCTTGCCCAACTGTTACTGCCAAATTGAATTCAAGAAACGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS GCA 72 bp | CGTGTAAGCGGCGGGTGGCGCTGCGGCGTATGGCAGTaGCAGCGGTGGCACCACCAGGCCGGCGCGCGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: RVSGGWRCGVWQ*QRWHHQAGARG Trigger: GCCGCGCGCGCCGGCCTGGTGGTGCCACCGCTGGCACTGCCATACGCCGCAGCGCCACCCGCCGCTTACACG 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS GCA 72 bp | TGGTTCAGATACCAGGAGGTGGCCTGGGTGGCGGGCTaGGGCGCGGGAGGGGGCTGCGGGGCGGGCGGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: WFRYQEVAWVAG*GAGGGCGAGGG Trigger: GCCACCGCCCGCCCCGCAGCCCCCTCCCGCGCCGCAGCCCGCCACCCAGGCCACCTCCTGGTATCTGAACCA 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS CCA 72 bp | AGGCGCCGCGGCGTGGTGCTCCGGCAGCGAGCCGTCTaGGGAACCTGCGGGCGTGGAGGATGCGCTGCGCGG | + |
|
Preference number: 6 (lower is better) Translates to: RRRGVVLRQRAV*GTCGRGGCAAR Trigger: CCGCGCAGCGCATCCTCCACGCCCGCAGGTTCCCCAGACGGCTCGCTGCCGGAGCACCACGCCGCGGCGCCT 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS CCA 72 bp | TTGAGGGCGCCGAGCGGGGAGCCGGGGCCGCTCGGGTaGTCCGACAGAGCCTCGTCCAGCGCGGGCGGAACG | + |
|
Preference number: 6 (lower is better) Translates to: LRAPSGEPGPLG*SDRASSSAGGT Trigger: CGTTCCGCCCGCGCTGGACGAGGCTCTGTCGGACCACCCGAGCGGCCCCGGCTCCCCGCTCGGCGCCCTCAA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS GCA 72 bp | CTGAAGCCGGGCAGCCCGTTAGGCGCCGCGGCGTGGTaGTCCGGCAGCGAGCCGTCTGGGGAACCTGCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: LKPGSPLGAAAW*SGSEPSGEPAG Trigger: GCCCGCAGGTTCCCCAGACGGCTCGCTGCCGGAGCACCACGCCGCGGCGCCTAACGGGCTGCCCGGCTTCAG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS CCA 72 bp | CGCCGTACTGCTCCGGGTGGCCGGAGTAGACGCCCATaGGGCTGGCCATGCCGCCGTAGCTGCCGGCCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: RRTAPGGRSRRP*GWPCRRSCRPP Trigger: GGGCGGCCGGCAGCTACGGCGGCATGGCCAGCCCCATGGGCGTCTACTCCGGCCACCCGGAGCAGTACGGCG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS CCA 72 bp | CGGCTGCGTGTAAGCGGCGGGTGGCGCTGCGGCGTATaGCAGTGCCAGCGGTGGCACCACCAGGCCGGCGCG | + |
|
Preference number: 6 (lower is better) Translates to: RLRVSGGWRCGV*QCQRWHHQAGA Trigger: CGCGCCGGCCTGGTGGTGCCACCGCTGGCACTGCCATACGCCGCAGCGCCACCCGCCGCTTACACGCAGCCG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS GCA 72 bp | GGCGTGGTGCTCCGGCAGCGAGCCGTCTGGGGAACCTaGGGGCGTGGAGGATGCGCTGCGCGGACTGGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: GVVLRQRAVWGT*GRGGCAARTGL Trigger: CAGGCCAGTCCGCGCAGCGCATCCTCCACGCCCGCAGGTTCCCCAGACGGCTCGCTGCCGGAGCACCACGCC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS CCA 72 bp | GCTCCGGCAGCGAGCCGTCTGGGGAACCTGCGGGCGTaGAGGATGCGCTGCGCGGACTGGCCTGCAGCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: APAASRLGNLRA*RMRCADWPAAL Trigger: GAGCGCTGCAGGCCAGTCCGCGCAGCGCATCCTCCACGCCCGCAGGTTCCCCAGACGGCTCGCTGCCGGAGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS CCA 72 bp | ACGCTGAAGCCGGGCAGCCCGTTAGGCGCCGCGGCGTaGTGCTCCGGCAGCGAGCCGTCTGGGGAACCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: TLKPGSPLGAAA*CSGSEPSGEPA Trigger: CGCAGGTTCCCCAGACGGCTCGCTGCCGGAGCACCACGCCGCGGCGCCTAACGGGCTGCCCGGCTTCAGCGT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS CAA 72 bp | GGCCCGTCAGCTACCGGGGTCCCTGTCGGAGCGCCCTaGGCCGTGGTCGAGGGCGGCTCCTTGAGGTGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: GPSATGVPVGAP*AVVEGGSLRWA Trigger: GGCCCACCTCAAGGAGCCGCCCTCGACCACGGCCAAGGGCGCTCCGACAGGGACCCCGGTAGCTGACGGGCC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS CAA 72 bp | GCCTGCAGCGCTCCCTCGGGGCTCAGCGTCTCCACCTaGGTGATGACCGGCAGCGCGGGGGACGCCGCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: ACSAPSGLSVST*VMTGSAGDAAS Trigger: CGAGGCGGCGTCCCCCGCGCTGCCGGTCATCACCAAGGTGGAGACGCTGAGCCCCGAGGGAGCGCTGCAGGC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS CAA 90 bp | GCCTCCTTGGGCCCGTCAGCTACCGGGGTCCCTGTCGGAGCGCCCTaGGCCGTGGTCGAGGGCGGCTCCTTGAGGTGGGCCCGCTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ASLGPSATGVPVGAP*AVVEGGSLRWARSS Trigger: GGAGGAGCGGGCCCACCTCAAGGAGCCGCCCTCGACCACGGCCAAGGGCGCTCCGACAGGGACCCCGGTAGCTGACGGGCCCAAGGAGGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS GCA 72 bp | CGGGCTGGTGGTGGTAGGGCGCGTAGGAGCGGCCCATaGCGGCGCCGTACTGCTCCGGGTGGCCGGAGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: RAGGGRARRSGP*RRRTAPGGRSR Trigger: TCTACTCCGGCCACCCGGAGCAGTACGGCGCCGGCATGGGCCGCTCCTACGCGCCCTACCACCACCAGCCCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS GCA 72 bp | CCTGCGGGCGTGGAGGATGCGCTGCGCGGACTGGCCTaGAGCGCTCCCTCGGGGCTCAGCGTCTCCACCTTG | + |
|
Preference number: 6 (lower is better) Translates to: PAGVEDALRGLA*SAPSGLSVSTL Trigger: CAAGGTGGAGACGCTGAGCCCCGAGGGAGCGCTGCAGGCCAGTCCGCGCAGCGCATCCTCCACGCCCGCAGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS GCA 72 bp | AGCCGTCTGGGGAACCTGCGGGCGTGGAGGATGCGCTaGGCGGACTGGCCTGCAGCGCTCCCTCGGGGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SRLGNLRAWRMR*ADWPAALPRGS Trigger: TGAGCCCCGAGGGAGCGCTGCAGGCCAGTCCGCGCAGCGCATCCTCCACGCCCGCAGGTTCCCCAGACGGCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS GCA 72 bp | CTGCGCGCACGGCTGCGTGTAAGCGGCGGGTGGCGCTaGGGCGTATGGCAGTGCCAGCGGTGGCACCACCAG | + |
|
Preference number: 6 (lower is better) Translates to: LRARLRVSGGWR*GVWQCQRWHHQ Trigger: CTGGTGGTGCCACCGCTGGCACTGCCATACGCCGCAGCGCCACCCGCCGCTTACACGCAGCCGTGCGCGCAG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS CCA 72 bp | ACTGCTCCGGGTGGCCGGAGTAGACGCCCATGGGGCTaGCCATGCCGCCGTAGCTGCCGGCCGCCCGGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: TAPGGRSRRPWG*PCRRSCRPPGS Trigger: ACTACCGGGCGGCCGGCAGCTACGGCGGCATGGCCAGCCCCATGGGCGTCTACTCCGGCCACCCGGAGCAGT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS CCA 72 bp | GGGAACCTGCGGGCGTGGAGGATGCGCTGCGCGGACTaGCCTGCAGCGCTCCCTCGGGGCTCAGCGTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: GNLRAWRMRCAD*PAALPRGSASP Trigger: TGGAGACGCTGAGCCCCGAGGGAGCGCTGCAGGCCAGTCCGCGCAGCGCATCCTCCACGCCCGCAGGTTCCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS CAA 90 bp | CGCGGACTGGCCTGCAGCGCTCCCTCGGGGCTCAGCGTCTCCACCTaGGTGATGACCGGCAGCGCGGGGGACGCCGCCTCGCTCTTAACC | + |
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Preference number: 6 (lower is better) Translates to: RGLACSAPSGLSVST*VMTGSAGDAASLLT Trigger: GGTTAAGAGCGAGGCGGCGTCCCCCGCGCTGCCGGTCATCACCAAGGTGGAGACGCTGAGCCCCGAGGGAGCGCTGCAGGCCAGTCCGCG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS GCA 72 bp | CCGGGTGGCCGGAGTAGACGCCCATGGGGCTGGCCATaGCGCCGTAGCTGCCGGCCGCCCGGTAGTAGTTTT | + |
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Preference number: 6 (lower is better) Translates to: PGGRSRRPWGWP*RRSCRPPGSSF Trigger: AAAACTACTACCGGGCGGCCGGCAGCTACGGCGGCATGGCCAGCCCCATGGGCGTCTACTCCGGCCACCCGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS GCA 72 bp | GACAGAGCCTCGTCCAGCGCGGGCGGAACGCACACGTaGGCGGGCCGCTCGGCCCCGGTGTACAGACTCATA | + |
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Preference number: 6 (lower is better) Translates to: DRASSSAGGTHT*AGRSAPVYRLI Trigger: TATGAGTCTGTACACCGGGGCCGAGCGGCCCGCGCACGTGTGCGTTCCGCCCGCGCTGGACGAGGCTCTGTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS CAA 90 bp | GGGGACGCCGCCTCGCTCTTAACCACGACTTTCTTCTCGGCCTCCTaGGGCCCGTCAGCTACCGGGGTCCCTGTCGGAGCGCCCTTGGCC | + |
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Preference number: 6 (lower is better) Translates to: GDAASLLTTTFFSAS*GPSATGVPVGAPLA Trigger: GGCCAAGGGCGCTCCGACAGGGACCCCGGTAGCTGACGGGCCCAAGGAGGCCGAGAAGAAAGTCGTGGTTAAGAGCGAGGCGGCGTCCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS CAA 72 bp | GCCTCGCTCTTAACCACGACTTTCTTCTCGGCCTCCTaGGGCCCGTCAGCTACCGGGGTCCCTGTCGGAGCG | + |
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Preference number: 6 (lower is better) Translates to: ASLLTTTFFSAS*GPSATGVPVGA Trigger: CGCTCCGACAGGGACCCCGGTAGCTGACGGGCCCAAGGAGGCCGAGAAGAAAGTCGTGGTTAAGAGCGAGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS GCA 72 bp | AGTAGACGCCCATGGGGCTGGCCATGCCGCCGTAGCTaGCGGCCGCCCGGTAGTAGTTTTGCTCACTCAAAT | + |
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Preference number: 6 (lower is better) Translates to: SRRPWGWPCRRS*RPPGSSFAHSN Trigger: ATTTGAGTGAGCAAAACTACTACCGGGCGGCCGGCAGCTACGGCGGCATGGCCAGCCCCATGGGCGTCTACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS GCA 72 bp | CATCTCCCGGACGTTGGGGAAAGTTTGCTGTTGGGTTaGAAACGTGTGGCCGGGGAGGTGGCTCAGGTCCCC | + |
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Preference number: 6 (lower is better) Translates to: HLPDVGESLLLG*KRVAGEVAQVP Trigger: GGGGACCTGAGCCACCTCCCCGGCCACACGTTTGCAACCCAACAGCAAACTTTCCCCAACGTCCGGGAGATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS CAA 72 bp | CATGCCGCCGTAGCTGCCGGCCGCCCGGTAGTAGTTTaGCTCACTCAAATAGGGTACCACTCCCAGGGCGTT | + |
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Preference number: 6 (lower is better) Translates to: HAAVAAGRPVVV*LTQIGYHSQGV Trigger: AACGCCCTGGGAGTGGTACCCTATTTGAGTGAGCAAAACTACTACCGGGCGGCCGGCAGCTACGGCGGCATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS CAA 72 bp | ACATCTCCCGGACGTTGGGGAAAGTTTGCTGTTGGGTaGCAAACGTGTGGCCGGGGAGGTGGCTCAGGTCCC | + |
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Preference number: 6 (lower is better) Translates to: TSPGRWGKFAVG*QTCGRGGGSGP Trigger: GGGACCTGAGCCACCTCCCCGGCCACACGTTTGCAACCCAACAGCAAACTTTCCCCAACGTCCGGGAGATGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS CAA 72 bp | CTCGCATTGCTCACCTGGGACTCCCCGAGGGACGAGTaGTCCAGTCCTAGCCGGTGCGAGTTGAACATCTCC | + |
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Preference number: 6 (lower is better) Translates to: LALLTWDSPRDE*SSPSRCELNIS Trigger: GGAGATGTTCAACTCGCACCGGCTAGGACTGGACAACTCGTCCCTCGGGGAGTCCCAGGTGAGCAATGCGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS GCA 72 bp | GACTCCCCGAGGGACGAGTTGTCCAGTCCTAGCCGGTaGGAGTTGAACATCTCCCGGACGTTGGGGAAAGTT | + |
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Preference number: 6 (lower is better) Translates to: DSPRDELSSPSR*ELNISRTLGKV Trigger: AACTTTCCCCAACGTCCGGGAGATGTTCAACTCGCACCGGCTAGGACTGGACAACTCGTCCCTCGGGGAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS CAA 90 bp | TGGGACTCCCCGAGGGACGAGTTGTCCAGTCCTAGCCGGTGCGAGTaGAACATCTCCCGGACGTTGGGGAAAGTTTGCTGTTGGGTTGCA | + |
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Preference number: 6 (lower is better) Translates to: WDSPRDELSSPSRCE*NISRTLGKVCCWVA Trigger: TGCAACCCAACAGCAAACTTTCCCCAACGTCCGGGAGATGTTCAACTCGCACCGGCTAGGACTGGACAACTCGTCCCTCGGGGAGTCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS GCA 72 bp | TGCGAGTTGAACATCTCCCGGACGTTGGGGAAAGTTTaGTGTTGGGTTGCAAACGTGTGGCCGGGGAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: CELNISRTLGKV*CWVANVWPGRW Trigger: CCACCTCCCCGGCCACACGTTTGCAACCCAACAGCAAACTTTCCCCAACGTCCGGGAGATGTTCAACTCGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS CCA 72 bp | TTGAACATCTCCCGGACGTTGGGGAAAGTTTGCTGTTaGGTTGCAAACGTGTGGCCGGGGAGGTGGCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: LNISRTLGKVCC*VANVWPGRWLR Trigger: CCTGAGCCACCTCCCCGGCCACACGTTTGCAACCCAACAGCAAACTTTCCCCAACGTCCGGGAGATGTTCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS CAA 72 bp | GTTGAACATCTCCCGGACGTTGGGGAAAGTTTGCTGTaGGGTTGCAAACGTGTGGCCGGGGAGGTGGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: VEHLPDVGESLL*GCKRVAGEVAQ Trigger: CTGAGCCACCTCCCCGGCCACACGTTTGCAACCCAACAGCAAACTTTCCCCAACGTCCGGGAGATGTTCAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS CAA 72 bp | GTGCGAGTTGAACATCTCCCGGACGTTGGGGAAAGTTaGCTGTTGGGTTGCAAACGTGTGGCCGGGGAGGTG | + |
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Preference number: 6 (lower is better) Translates to: VRVEHLPDVGES*LLGCKRVAGEV Trigger: CACCTCCCCGGCCACACGTTTGCAACCCAACAGCAAACTTTCCCCAACGTCCGGGAGATGTTCAACTCGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS CAA 72 bp | CCGAGGGACGAGTTGTCCAGTCCTAGCCGGTGCGAGTaGAACATCTCCCGGACGTTGGGGAAAGTTTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: PRDELSSPSRCE*NISRTLGKVCC Trigger: ACAGCAAACTTTCCCCAACGTCCGGGAGATGTTCAACTCGCACCGGCTAGGACTGGACAACTCGTCCCTCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS TCA 72 bp | CGAGGGACGAGTTGTCCAGTCCTAGCCGGTGCGAGTTaGACATCTCCCGGACGTTGGGGAAAGTTTGCTGTT | + |
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Preference number: 6 (lower is better) Translates to: RGTSCPVLAGAS*TSPGRWGKFAV Trigger: AACAGCAAACTTTCCCCAACGTCCGGGAGATGTTCAACTCGCACCGGCTAGGACTGGACAACTCGTCCCTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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| CDS CAA 72 bp | AGTCCTAGCCGGTGCGAGTTGAACATCTCCCGGACGTaGGGGAAAGTTTGCTGTTGGGTTGCAAACGTGTGG | + |
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Preference number: 6 (lower is better) Translates to: SPSRCELNISRT*GKVCCWVANVW Trigger: CCACACGTTTGCAACCCAACAGCAAACTTTCCCCAACGTCCGGGAGATGTTCAACTCGCACCGGCTAGGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054691.8 |
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