Pregenerated sensors for FOXC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050295Ensembl transcript IDs: ENSMUST00000062292.5
Found 130 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGATTGCGGACCAGGCCGCCTGGAGCAAGCCGGCCGGTGCGGCCTaGCTGAGGCTGGCCAGCACGCCTGGGCTCCGTTCGCCCACCGAG | + |
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Preference number: 1 (lower is better) Translates to: QIADQAAWSKPAGAA*LRLASTPGLRSPTE Trigger: CTCGGTGGGCGAACGGAGCCCAGGCGTGCTGGCCAGCCTCAGTCAGGCCGCACCGGCCGGCTTGCTCCAGGCGGCCTGGTCCGCAATCTG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| 3UTR GCA 90 bp | CAGGTCGCAGATTGCGGACCAGGCCGCCTGGAGCAAGCCGGCCGGTaGGGCCTGACTGAGGCTGGCCAGCACGCCTGGGCTCCGTTCGCC | + |
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Preference number: 1 (lower is better) Translates to: QVADCGPGRLEQAGR*GLTEAGQHAWAPFA Trigger: GGCGAACGGAGCCCAGGCGTGCTGGCCAGCCTCAGTCAGGCCGCACCGGCCGGCTTGCTCCAGGCGGCCTGGTCCGCAATCTGCGACCTG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| 3UTR GCA 90 bp | GACGCCATTTGCTCCACAGACAACTCCTTTCGGGAAAGAGGCCGCTaGCGAGCCGCGAGCGGGAACCCGGAGGGCGGCCGCGGGGCGGGG | + |
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Preference number: 1 (lower is better) Translates to: DAICSTDNSFRERGR*RAASGNPEGGRGAG Trigger: CCCCGCCCCGCGGCCGCCCTCCGGGTTCCCGCTCGCGGCTCGGCAGCGGCCTCTTTCCCGAAAGGAGTTGTCTGTGGAGCAAATGGCGTC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| 3UTR CCA 90 bp | TACAGCTCATTAGCTCAGGAGCCTTCCCAGCCCCGAGCGGCGTCCTaGAAGCCGGCGTCGGGGCTGGACGCCACTCCGAAATGCATGGCC | + |
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Preference number: 1 (lower is better) Translates to: YSSLAQEPSQPRAAS*KPASGLDATPKCMA Trigger: GGCCATGCATTTCGGAGTGGCGTCCAGCCCCGACGCCGGCTTCCAGGACGCCGCTCGGGGCTGGGAAGGCTCCTGAGCTAATGAGCTGTA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| 3UTR CCA 90 bp | CCCAGCACCACAAGGCAACAGGACTCGAGGACAGCTAGGTTCCCCTaGGTCGCCTGGAACTGGACCCAGGGCTGGCTGCGGCCTAGGCGT | + |
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Preference number: 1 (lower is better) Translates to: PSTTRQQDSRTARFP*VAWNWTQGWLRPRR Trigger: ACGCCTAGGCCGCAGCCAGCCCTGGGTCCAGTTCCAGGCGACCCAGGGGAACCTAGCTGTCCTCGAGTCCTGTTGCCTTGTGGTGCTGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| 3UTR TCA 90 bp | CGTTCGCCCACCGAGGCTGCGGGACCCGCTGTCACCCGTGAGCAATaGAGTGCCTGTGACCTTTCCACCCGGGCTGGGCTCCTAAGCACA | + |
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Preference number: 1 (lower is better) Translates to: RSPTEAAGPAVTREQ*SACDLSTRAGLLST Trigger: TGTGCTTAGGAGCCCAGCCCGGGTGGAAAGGTCACAGGCACTTCATTGCTCACGGGTGACAGCGGGTCCCGCAGCCTCGGTGGGCGAACG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| 3UTR GCA 90 bp | CAGCTAGGTTCCCCTGGGTCGCCTGGAACTGGACCCAGGGCTGGCTaGGGCCTAGGCGTTCTCAGGGCCGCAAGGCCTAGGAGTAGTAGA | + |
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Preference number: 1 (lower is better) Translates to: QLGSPGSPGTGPRAG*GLGVLRAARPRSSR Trigger: TCTACTACTCCTAGGCCTTGCGGCCCTGAGAACGCCTAGGCCGCAGCCAGCCCTGGGTCCAGTTCCAGGCGACCCAGGGGAACCTAGCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| 3UTR CCA 90 bp | ACAAGGCAACAGGACTCGAGGACAGCTAGGTTCCCCTGGGTCGCCTaGAACTGGACCCAGGGCTGGCTGCGGCCTAGGCGTTCTCAGGGC | + |
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Preference number: 1 (lower is better) Translates to: TRQQDSRTARFPWVA*NWTQGWLRPRRSQG Trigger: GCCCTGAGAACGCCTAGGCCGCAGCCAGCCCTGGGTCCAGTTCCAGGCGACCCAGGGGAACCTAGCTGTCCTCGAGTCCTGTTGCCTTGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| 3UTR CCA 90 bp | GCTTGCCCGGAGGAGACGCCCTGCCAGCGCCACAGCGAGCTTCCCTaGCTATTATGTTACCGCTCTGAGCGGCGGGAACCGAGCGAATCA | + |
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Preference number: 1 (lower is better) Translates to: ACPEETPCQRHSELP*LLCYRSERREPSES Trigger: TGATTCGCTCGGTTCCCGCCGCTCAGAGCGGTAACATAATAGCCAGGGAAGCTCGCTGTGGCGCTGGCAGGGCGTCTCCTCCGGGCAAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| 3UTR TCA 90 bp | CTGCCAGCGCCACAGCGAGCTTCCCTGGCTATTATGTTACCGCTCTaGGCGGCGGGAACCGAGCGAATCAGAGGCCACGTAAGGCAGTTT | + |
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Preference number: 1 (lower is better) Translates to: LPAPQRASLAIMLPL*AAGTERIRGHVRQF Trigger: AAACTGCCTTACGTGGCCTCTGATTCGCTCGGTTCCCGCCGCTCAGAGCGGTAACATAATAGCCAGGGAAGCTCGCTGTGGCGCTGGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| 3UTR TCA 90 bp | GGCAGAGGCAGAGGGGCAAGACGAATGAGCAGGAAAGCGAGTCTCTaGACGCAAGAAACTTACGTGGTATCTGGAGTAAACTGTCCTTTA | + |
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Preference number: 1 (lower is better) Translates to: GRGRGARRMSRKASL*TQETYVVSGVNCPL Trigger: TAAAGGACAGTTTACTCCAGATACCACGTAAGTTTCTTGCGTTCAGAGACTCGCTTTCCTGCTCATTCGTCTTGCCCCTCTGCCTCTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| 3UTR-3UTR TCA 90 bp | CTAGGCGTTCTCAGGGCCGCAAGGCCTAGGAGTAGTAGACCGGGTGGGTCGCAGCCGGCCGGTGCGGCCTaGCTGAGGCTGGCCAGCACG | + |
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Preference number: 2 (lower is better) Translates to: LGVLRAARPRSSRPGGSQPAGAA*LRLAST Trigger: CGTGCTGGCCAGCCTCAGTCAGGCCGCACCGGCCGG...CTGCGACCCACCCGGTCTACTACTCCTAGGCCTTGCGGCCCTGAGAACGCCTAG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| 3UTR-3UTR TCA 90 bp | CTAGGCGTTCTCAGGGCCGCAAGGCCTAGGAGTAGTAGACCGGGTGGGTCGCAGCCCTTAAAGCCACAGTaGGGCCAGCCCCAGCCGGCT | + |
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Preference number: 2 (lower is better) Translates to: LGVLRAARPRSSRPGGSQPLKPQ*GQPQPA Trigger: AGCCGGCTGGGGCTGGCCTCACTGTGGCTTTAAGGG...CTGCGACCCACCCGGTCTACTACTCCTAGGCCTTGCGGCCCTGAGAACGCCTAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| 3UTR-3UTR TCA 90 bp | GCTGCGGACGCCGCGACCCCGGGAACCCCGCGCCCTTCTTCCCTCGGCACAGTCAAAATATCTTACAGGTaGGAGGCAAGGCAGAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: AADAATPGTPRPSSLGTVKISYR*EARQRQ Trigger: CTGCCTCTGCCTTGCCTCTCACCTGTAAGATATTTT...GACTGTGCCGAGGGAAGAAGGGCGCGGGGTTCCCGGGGTCGCGGCGTCCGCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| 3UTR-3UTR TCA 90 bp | GCTGCGGACGCCGCGACCCCGGGAACCCCGCGCCCTTCTTCCCTCGGCACAGTCAAAATAGGTTTTCTTTaGGCTGATGCTGGTGAGCTG | + |
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Preference number: 2 (lower is better) Translates to: AADAATPGTPRPSSLGTVKIGFL*ADAGEL Trigger: CAGCTCACCAGCATCAGCTCAAAGAAAACCTATTTT...GACTGTGCCGAGGGAAGAAGGGCGCGGGGTTCCCGGGGTCGCGGCGTCCGCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| 3UTR-3UTR GCA 90 bp | TCCCAGCCCCGAGCGGCGTCCTGGAAGCCGGCGTCGGGGCTGGACGCCACTCCGAGCAACAGCAATTACTaGTTAAGTGTTGCCTCTAGA | + |
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Preference number: 2 (lower is better) Translates to: SQPRAASWKPASGLDATPSNSNY*LSVASR Trigger: TCTAGAGGCAACACTTAAGCAGTAATTGCTGTTGCT...CGGAGTGGCGTCCAGCCCCGACGCCGGCTTCCAGGACGCCGCTCGGGGCTGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| 3UTR-3UTR CCA 90 bp | TGCTGCGGACGCCGCGACCCCGGGAACCCCGCGCCCTTCTTCCCTCGGCACAGTACACTTTCTGGTGTTTaGTCCGTAACATCCAACTAC | + |
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Preference number: 2 (lower is better) Translates to: CCGRRDPGNPAPFFPRHSTLSGV*SVTSNY Trigger: GTAGTTGGATGTTACGGACCAAACACCAGAAAGTGT...ACTGTGCCGAGGGAAGAAGGGCGCGGGGTTCCCGGGGTCGCGGCGTCCGCAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| 3UTR-3UTR TCA 90 bp | GCTGCGGACGCCGCGACCCCGGGAACCCCGCGCCCTTCTTCCCTCGGCACAGTCGAGTTTAGCGAAATTTaGCATCACCTAGAAGTTTTC | + |
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Preference number: 2 (lower is better) Translates to: AADAATPGTPRPSSLGTVEFSEI*HHLEVF Trigger: GAAAACTTCTAGGTGATGTCAAATTTCGCTAAACTC...GACTGTGCCGAGGGAAGAAGGGCGCGGGGTTCCCGGGGTCGCGGCGTCCGCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| 3UTR-3UTR GCA 90 bp | GCTGCGGACGCCGCGACCCCGGGAACCCCGCGCCCTTCTTCCCTCGGCACAGTCACGTATAATACTCATTaGAATCTATGTGGGACACAT | + |
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Preference number: 2 (lower is better) Translates to: AADAATPGTPRPSSLGTVTYNTH*NLCGTH Trigger: ATGTGTCCCACATAGATTGCAATGAGTATTATACGT...GACTGTGCCGAGGGAAGAAGGGCGCGGGGTTCCCGGGGTCGCGGCGTCCGCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| 3UTR-3UTR GCA 90 bp | ACCCAACTTGGGACACCACACTGGGTGCACAAATCCCAGCGCCACGCTGTGACTAGGGCCAATCCGGATTaGCCCCTAGGTTTAACTGTA | + |
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Preference number: 2 (lower is better) Translates to: TQLGTPHWVHKSQRHAVTRANPD*PLGLTV Trigger: TACAGTTAAACCTAGGGGGCAATCCGGATTGGCCCT...AGTCACAGCGTGGCGCTGGGATTTGTGCACCCAGTGTGGTGTCCCAAGTTGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| 3UTR-3UTR TCA 90 bp | CAAACAGAAGCCGGCCGGCCGCCCGCCGCAGCGGGTAATTACAGCTCATTAGCTTTCTGTTCGCTGGTGTaGGGAATCTTCTCAAGTTTT | + |
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Preference number: 2 (lower is better) Translates to: QTEAGRPPAAAGNYSSLAFCSLV*GIFSSF Trigger: AAAACTTGAGAAGATTCCTCACACCAGCGAACAGAA...AGCTAATGAGCTGTAATTACCCGCTGCGGCGGGCGGCCGGCCGGCTTCTGTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| 3UTR-3UTR CCA 90 bp | TGCCAGCGCCACAGCGAGCTTCCCTGGCTATTATGTTACCGCTCTGAGCGGCGGAGAGATTCTGTTCGCTaGTGTGAGGAATCTTCTCAA | + |
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Preference number: 2 (lower is better) Translates to: CQRHSELPWLLCYRSERRRDSVR*CEESSQ Trigger: TTGAGAAGATTCCTCACACCAGCGAACAGAATCTCT...CCGCCGCTCAGAGCGGTAACATAATAGCCAGGGAAGCTCGCTGTGGCGCTGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| 3UTR-3UTR CCA 90 bp | CTAGGCGTTCTCAGGGCCGCAAGGCCTAGGAGTAGTAGACCGGGTGGGTCGCAGTTTTGGAACACTTTCTaGTGTTTGGTCCGTAACATC | + |
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Preference number: 2 (lower is better) Translates to: LGVLRAARPRSSRPGGSQFWNTF*CLVRNI Trigger: GATGTTACGGACCAAACACCAGAAAGTGTTCCAAAA...CTGCGACCCACCCGGTCTACTACTCCTAGGCCTTGCGGCCCTGAGAACGCCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| 3UTR-3UTR GCA 90 bp | ACCCAACTTGGGACACCACACTGGGTGCACAAATCCCAGCGCCACGCTGTGACTTTCTTTTACTGTTCCTaGTCTGGGGTTCCATTCCAT | + |
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Preference number: 2 (lower is better) Translates to: TQLGTPHWVHKSQRHAVTFFYCS*SGVPFH Trigger: ATGGAATGGAACCCCAGAGCAGGAACAGTAAAAGAA...AGTCACAGCGTGGCGCTGGGATTTGTGCACCCAGTGTGGTGTCCCAAGTTGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| 3UTR-3UTR GCA 90 bp | TGCCAGCGCCACAGCGAGCTTCCCTGGCTATTATGTTACCGCTCTGAGCGGCGGCTTCCTTCTGGTTATTaGTGTAAGTCTTCAAAAACA | + |
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Preference number: 2 (lower is better) Translates to: CQRHSELPWLLCYRSERRLPSGY*CKSSKT Trigger: TGTTTTTGAAGACTTACAGCAATAACCAGAAGGAAG...CCGCCGCTCAGAGCGGTAACATAATAGCCAGGGAAGCTCGCTGTGGCGCTGGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| 3UTR-3UTR CCA 90 bp | TACCAACACCTTTCTAGACACACACATGTTCCATTCTTAATTTTTCAAACCTGCGAGGGTCTTCTCCTTTaGACGCCATTTGCTCCACAG | + |
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Preference number: 2 (lower is better) Translates to: YQHLSRHTHVPFLIFQTCEGLLL*TPFAPQ Trigger: CTGTGGAGCAAATGGCGTCCAAAGGAGAAGACCCTC...GCAGGTTTGAAAAATTAAGAATGGAACATGTGTGTGTCTAGAAAGGTGTTGGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| 3UTR-3UTR TCA 90 bp | TACCAACACCTTTCTAGACACACACATGTTCCATTCTTAATTTTTCAAACCTGCAACAAACTGAAGGCCTaGATATCTGTAATCAAACCG | + |
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Preference number: 2 (lower is better) Translates to: YQHLSRHTHVPFLIFQTCNKLKA*ISVIKP Trigger: CGGTTTGATTACAGATATTCAGGCCTTCAGTTTGTT...GCAGGTTTGAAAAATTAAGAATGGAACATGTGTGTGTCTAGAAAGGTGTTGGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| 3UTR-3UTR CCA 90 bp | TACCAACACCTTTCTAGACACACACATGTTCCATTCTTAATTTTTCAAACCTGCAACTTGAAAAGCTTTTaGAACACTTTCTGGTGTTTG | + |
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Preference number: 2 (lower is better) Translates to: YQHLSRHTHVPFLIFQTCNLKSF*NTFWCL Trigger: CAAACACCAGAAAGTGTTCCAAAAGCTTTTCAAGTT...GCAGGTTTGAAAAATTAAGAATGGAACATGTGTGTGTCTAGAAAGGTGTTGGTA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| 3UTR TCA 72 bp | GACCAGGCCGCCTGGAGCAAGCCGGCCGGTGCGGCCTaGCTGAGGCTGGCCAGCACGCCTGGGCTCCGTTCG | + |
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Preference number: 3 (lower is better) Translates to: DQAAWSKPAGAA*LRLASTPGLRS Trigger: CGAACGGAGCCCAGGCGTGCTGGCCAGCCTCAGTCAGGCCGCACCGGCCGGCTTGCTCCAGGCGGCCTGGTC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| 3UTR GCA 72 bp | GATTGCGGACCAGGCCGCCTGGAGCAAGCCGGCCGGTaGGGCCTGACTGAGGCTGGCCAGCACGCCTGGGCT | + |
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Preference number: 3 (lower is better) Translates to: DCGPGRLEQAGR*GLTEAGQHAWA Trigger: AGCCCAGGCGTGCTGGCCAGCCTCAGTCAGGCCGCACCGGCCGGCTTGCTCCAGGCGGCCTGGTCCGCAATC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| 3UTR CCA 72 bp | AGCCCCGAGCGGCGTCCTGGAAGCCGGCGTCGGGGCTaGACGCCACTCCGAAATGCATGGCCGCCTGAAGGC | + |
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Preference number: 3 (lower is better) Translates to: SPERRPGSRRRG*TPLRNAWPPEG Trigger: GCCTTCAGGCGGCCATGCATTTCGGAGTGGCGTCCAGCCCCGACGCCGGCTTCCAGGACGCCGCTCGGGGCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| 3UTR CCA 72 bp | AGGTTCCCCTGGGTCGCCTGGAACTGGACCCAGGGCTaGCTGCGGCCTAGGCGTTCTCAGGGCCGCAAGGCC | + |
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Preference number: 3 (lower is better) Translates to: RFPWVAWNWTQG*LRPRRSQGRKA Trigger: GGCCTTGCGGCCCTGAGAACGCCTAGGCCGCAGCCAGCCCTGGGTCCAGTTCCAGGCGACCCAGGGGAACCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| 3UTR GCA 72 bp | GGCCAGCCCCAGCCGGCTTGCCCGGAGGAGACGCCCTaGCAGCGCCACAGCGAGCTTCCCTGGCTATTATGT | + |
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Preference number: 3 (lower is better) Translates to: GQPQPACPEETP*QRHSELPWLLC Trigger: ACATAATAGCCAGGGAAGCTCGCTGTGGCGCTGGCAGGGCGTCTCCTCCGGGCAAGCCGGCTGGGGCTGGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| 3UTR CCA 72 bp | TTAGCTCAGGAGCCTTCCCAGCCCCGAGCGGCGTCCTaGAAGCCGGCGTCGGGGCTGGACGCCACTCCGAAA | + |
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Preference number: 3 (lower is better) Translates to: LAQEPSQPRAAS*KPASGLDATPK Trigger: TTTCGGAGTGGCGTCCAGCCCCGACGCCGGCTTCCAGGACGCCGCTCGGGGCTGGGAAGGCTCCTGAGCTAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| 3UTR GCA 72 bp | TCGTGTCCCTGTCACACAAGTCGCCAGGTCGCAGATTaGGGACCAGGCCGCCTGGAGCAAGCCGGCCGGTGC | + |
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Preference number: 3 (lower is better) Translates to: SCPCHTSRQVAD*GPGRLEQAGRC Trigger: GCACCGGCCGGCTTGCTCCAGGCGGCCTGGTCCGCAATCTGCGACCTGGCGACTTGTGTGACAGGGACACGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| 3UTR CCA 72 bp | CAGGACTCGAGGACAGCTAGGTTCCCCTGGGTCGCCTaGAACTGGACCCAGGGCTGGCTGCGGCCTAGGCGT | + |
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Preference number: 3 (lower is better) Translates to: QDSRTARFPWVA*NWTQGWLRPRR Trigger: ACGCCTAGGCCGCAGCCAGCCCTGGGTCCAGTTCCAGGCGACCCAGGGGAACCTAGCTGTCCTCGAGTCCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| 3UTR TCA 72 bp | ACCGAGGCTGCGGGACCCGCTGTCACCCGTGAGCAATaGAGTGCCTGTGACCTTTCCACCCGGGCTGGGCTC | + |
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Preference number: 3 (lower is better) Translates to: TEAAGPAVTREQ*SACDLSTRAGL Trigger: GAGCCCAGCCCGGGTGGAAAGGTCACAGGCACTTCATTGCTCACGGGTGACAGCGGGTCCCGCAGCCTCGGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| 3UTR-3UTR CAA 90 bp | TGCTGCGGACGCCGCGACCCCGGGAACCCCGCGCCCTTCTTCCCTCGGCACAGTAACACTTTCTGGTGTTaGGTCCGTAACATCCAACTA | + |
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Preference number: 3 (lower is better) Translates to: CCGRRDPGNPAPFFPRHSNTFWC*VRNIQL Trigger: TAGTTGGATGTTACGGACCAAACACCAGAAAGTGTT...ACTGTGCCGAGGGAAGAAGGGCGCGGGGTTCCCGGGGTCGCGGCGTCCGCAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| 3UTR-3UTR CAA 90 bp | TGCCAGCGCCACAGCGAGCTTCCCTGGCTATTATGTTACCGCTCTGAGCGGCGGGAGGGCCAATCCGGATaGCCCCCTAGGTTTAACTGT | + |
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Preference number: 3 (lower is better) Translates to: CQRHSELPWLLCYRSERREGQSG*PPRFNC Trigger: ACAGTTAAACCTAGGGGGCAATCCGGATTGGCCCTC...CCGCCGCTCAGAGCGGTAACATAATAGCCAGGGAAGCTCGCTGTGGCGCTGGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| 3UTR TCA 72 bp | CCACAGCGAGCTTCCCTGGCTATTATGTTACCGCTCTaGGCGGCGGGAACCGAGCGAATCAGAGGCCACGTA | + |
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Preference number: 3 (lower is better) Translates to: PQRASLAIMLPL*AAGTERIRGHV Trigger: TACGTGGCCTCTGATTCGCTCGGTTCCCGCCGCTCAGAGCGGTAACATAATAGCCAGGGAAGCTCGCTGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| 3UTR GCA 72 bp | GGGAGGGGAGGAGGGTCTTCTCCTTTGGACGCCATTTaGTCCACAGACAACTCCTTTCGGGAAAGAGGCCGC | + |
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Preference number: 3 (lower is better) Translates to: GRGGGSSPLDAI*STDNSFRERGR Trigger: GCGGCCTCTTTCCCGAAAGGAGTTGTCTGTGGAGCAAATGGCGTCCAAAGGAGAAGACCCTCCTCCCCTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| 3UTR-3UTR CAA 90 bp | TGCCAGCGCCACAGCGAGCTTCCCTGGCTATTATGTTACCGCTCTGAGCGGCGGTATCTCCGGGTACATTaGCTTCTCTGCGTACAGGCA | + |
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Preference number: 3 (lower is better) Translates to: CQRHSELPWLLCYRSERRYLRVH*LLCVQA Trigger: TGCCTGTACGCAGAGAAGCAAATGTACCCGGAGATA...CCGCCGCTCAGAGCGGTAACATAATAGCCAGGGAAGCTCGCTGTGGCGCTGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| 3UTR CCA 72 bp | CTGCTCAGGTCTCTCGCAGGCCTAGATAACCCAACTTaGGACACCACACTGGGTGCACAAATCCCAGCGCCA | + |
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Preference number: 3 (lower is better) Translates to: LLRSLAGLDNPT*DTTLGAQIPAP Trigger: TGGCGCTGGGATTTGTGCACCCAGTGTGGTGTCCCAAGTTGGGTTATCTAGGCCTGCGAGAGACCTGAGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| 3UTR GCA 72 bp | GGGCTCCTCGCGAGCCACAAGCTCACACTAGAAACCTaGTTAGCTAGCTGCCTGGCCCAGAAAAGGAAAAGC | + |
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Preference number: 3 (lower is better) Translates to: GLLASHKLTLET*LASCLAQKRKS Trigger: GCTTTTCCTTTTCTGGGCCAGGCAGCTAGCTAAGCAGGTTTCTAGTGTGAGCTTGTGGCTCGCGAGGAGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| 3UTR-3UTR CAA 90 bp | TACCAACACCTTTCTAGACACACACATGTTCCATTCTTAATTTTTCAAACCTGCCCAGCCCCAGCCGGCTaGCCCGGAGGAGACGCCCTG | + |
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Preference number: 3 (lower is better) Translates to: YQHLSRHTHVPFLIFQTCPAPAG*PGGDAL Trigger: CAGGGCGTCTCCTCCGGGCAAGCCGGCTGGGGCTGG...GCAGGTTTGAAAAATTAAGAATGGAACATGTGTGTGTCTAGAAAGGTGTTGGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| 3UTR TCA 72 bp | AGAGGGGCAAGACGAATGAGCAGGAAAGCGAGTCTCTaGACGCAAGAAACTTACGTGGTATCTGGAGTAAAC | + |
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Preference number: 3 (lower is better) Translates to: RGARRMSRKASL*TQETYVVSGVN Trigger: GTTTACTCCAGATACCACGTAAGTTTCTTGCGTTCAGAGACTCGCTTTCCTGCTCATTCGTCTTGCCCCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| 3UTR CCA 72 bp | ATTTTGCATTGCTGGATTCTTTTACTGTTCCTGCTCTaGGGTTCCATTCCATTTGGCTCTAAGAGTGCCGGG | + |
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Preference number: 3 (lower is better) Translates to: ILHCWILLLFLL*GSIPFGSKSAG Trigger: CCCGGCACTCTTAGAGCCAAATGGAATGGAACCCCAGAGCAGGAACAGTAAAAGAATCCAGCAATGCAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| 3UTR TCA 72 bp | AGGAACCTGCTTTATCTCGAAAACAAACTGAAGGCCTaGATATCTGTAATCAAACCGCCATCTCCCCAAGTC | + |
|
Preference number: 3 (lower is better) Translates to: RNLLYLENKLKA*ISVIKPPSPQV Trigger: GACTTGGGGAGATGGCGGTTTGATTACAGATATTCAGGCCTTCAGTTTGTTTTCGAGATAAAGCAGGTTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
||
| 3UTR GCA 72 bp | TTTGGCATCTGGCTCACAGGTACGTATAATACTCATTaGAATCTATGTGGGACACATAGGCTGATCTCCATC | + |
|
Preference number: 3 (lower is better) Translates to: FGIWLTGTYNTH*NLCGTHRLISI Trigger: GATGGAGATCAGCCTATGTGTCCCACATAGATTGCAATGAGTATTATACGTACCTGTGAGCCAGATGCCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
||
| 3UTR CCA 72 bp | GCTGGTGAGCTGAATTTCAGGAGAGATTCTGTTCGCTaGTGTGAGGAATCTTCTCAAGTTTTAAAATTTGTA | + |
|
Preference number: 3 (lower is better) Translates to: AGELNFRRDSVR*CEESSQVLKFV Trigger: TACAAATTTTAAAACTTGAGAAGATTCCTCACACCAGCGAACAGAATCTCTCCTGAAATTCAGCTCACCAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
||
| 3UTR-3UTR CAA 90 bp | ACTGTGGTAACACTGGTGCTGATTCATGGACTTAAAAATCGCCAAATCATGTTCACTGAAGAAAAGTATTaGTTCATGTGCCAACTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: TVVTLVLIHGLKNRQIMFTEEKY*FMCQLR Trigger: TCTGAGTTGGCACATGAACAAATACTTTTCTTCAGT...GAACATGATTTGGCGATTTTTAAGTCCATGAATCAGCACCAGTGTTACCACAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
||
| 3UTR CCA 72 bp | AGGCAATTTAACTTGAAAAGCTTTTGGAACACTTTCTaGTGTTTGGTCCGTAACATCCAACTACAAATTAAA | + |
|
Preference number: 3 (lower is better) Translates to: RQFNLKSFWNTF*CLVRNIQLQIK Trigger: TTTAATTTGTAGTTGGATGTTACGGACCAAACACCAGAAAGTGTTCCAAAAGCTTTTCAAGTTAAATTGCCT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
||
| CDS-3UTR TCA 90 bp | TCCCAGCCCCGAGCGGCGTCCTGGAAGCCGGCGTCGGGGCTGGACGCCACTCCGCTGCAGCGTCCAGGCTaGGCGGCCGCGCCGACGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SQPRAASWKPASGLDATPLQRPG*AAAPTA Trigger: TGCCGTCGGCGCGGCCGCTCAGCCTGGACGCTGCAG...CGGAGTGGCGTCCAGCCCCGACGCCGGCTTCCAGGACGCCGCTCGGGGCTGGGA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
||
| CDS-3UTR CCA 90 bp | GCTGCGGACGCCGCGACCCCGGGAACCCCGCGCCCTTCTTCCCTCGGCACAGTCGCCGCGCTCGCCAAGTaGCCCAGGTCTCCACCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: AADAATPGTPRPSSLGTVAALAK*PRSPPA Trigger: GGCAGGTGGAGACCTGGGCCACTTGGCGAGCGCGGC...GACTGTGCCGAGGGAAGAAGGGCGCGGGGTTCCCGGGGTCGCGGCGTCCGCAGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
||
| CDS-3UTR CCA 90 bp | TCCCAGCCCCGAGCGGCGTCCTGGAAGCCGGCGTCGGGGCTGGACGCCACTCCGTCCGTCTTGATGTCCTaGATGCGCACGGGCGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SQPRAASWKPASGLDATPSVLMS*MRTGGG Trigger: GCCGCCGCCCGTGCGCATCCAGGACATCAAGACGGA...CGGAGTGGCGTCCAGCCCCGACGCCGGCTTCCAGGACGCCGCTCGGGGCTGGGA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
||
| CDS-3UTR CCA 90 bp | TCCCAGCCCCGAGCGGCGTCCTGGAAGCCGGCGTCGGGGCTGGACGCCACTCCGCGATTTTGGGCACTGTaGCGGCGCTGCCGCTGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: SQPRAASWKPASGLDATPRFWAL*RRCRCL Trigger: TAGGCAGCGGCAGCGCCGCCACAGTGCCCAAAATCG...CGGAGTGGCGTCCAGCCCCGACGCCGGCTTCCAGGACGCCGCTCGGGGCTGGGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
||
| CDS-3UTR GCA 90 bp | GCTGCGGACGCCGCGACCCCGGGAACCCCGCGCCCTTCTTCCCTCGGCACAGTCCACTGGAGCTCTGGCTaGAGGGGGAGCTGTAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: AADAATPGTPRPSSLGTVHWSSG*RGSCRG Trigger: CCCTCTACAGCTCCCCCTGCAGCCAGAGCTCCAGTG...GACTGTGCCGAGGGAAGAAGGGCGCGGGGTTCCCGGGGTCGCGGCGTCCGCAGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
||
| CDS-3UTR CCA 90 bp | TGCTGCGGACGCCGCGACCCCGGGAACCCCGCGCCCTTCTTCCCTCGGCACAGTGTGAGTCGGCCCTGGTaGGATGCAGGGTGGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CCGRRDPGNPAPFFPRHSVSRPW*DAGWWL Trigger: CAGCCACCACCCTGCATCCCACCAGGGCCGACTCAC...ACTGTGCCGAGGGAAGAAGGGCGCGGGGTTCCCGGGGTCGCGGCGTCCGCAGCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
||
| CDS-3UTR TCA 90 bp | TGCTGCGGACGCCGCGACCCCGGGAACCCCGCGCCCTTCTTCCCTCGGCACAGTTCAGGTACCACGAGGTaGGTCGGCCCTGGTGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: CCGRRDPGNPAPFFPRHSSGTTR*VGPGGM Trigger: CATCCCACCAGGGCCGACTCACCTCGTGGTACCTGA...ACTGTGCCGAGGGAAGAAGGGCGCGGGGTTCCCGGGGTCGCGGCGTCCGCAGCA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
||
| CDS-3UTR GCA 90 bp | TGCTGCGGACGCCGCGACCCCGGGAACCCCGCGCCCTTCTTCCCTCGGCACAGTTCGACAAGCTGCTGCTaGTGCTGTCGGGGCTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: CCGRRDPGNPAPFFPRHSSTSCC*CCRGSR Trigger: TCGAGAGCCCCGACAGCAGCAGCAGCAGCTTGTCGA...ACTGTGCCGAGGGAAGAAGGGCGCGGGGTTCCCGGGGTCGCGGCGTCCGCAGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
||
| CDS-3UTR GCA 90 bp | CTAGGCGTTCTCAGGGCCGCAAGGCCTAGGAGTAGTAGACCGGGTGGGTCGCAGCGGCGGCGCGGGTTCTaGAGCGTCCAGGCTGAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LGVLRAARPRSSRPGGSQRRRGF*SVQAER Trigger: CCGCTCAGCCTGGACGCTGCAGAACCCGCGCCGCCG...CTGCGACCCACCCGGTCTACTACTCCTAGGCCTTGCGGCCCTGAGAACGCCTAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
||
| 3UTR CAA 72 bp | ACCCTTAAAGCCACAGTGAGGCCAGCCCCAGCCGGCTaGCCCGGAGGAGACGCCCTGCCAGCGCCACAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: TLKATVRPAPAG*PGGDALPAPQR Trigger: TCGCTGTGGCGCTGGCAGGGCGTCTCCTCCGGGCAAGCCGGCTGGGGCTGGCCTCACTGTGGCTTTAAGGGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
||
| CDS-3UTR GCA 90 bp | CTAGGCGTTCTCAGGGCCGCAAGGCCTAGGAGTAGTAGACCGGGTGGGTCGCAGCGTAGGCGCGCGCCATaGTGCCCGGGTACTGCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: LGVLRAARPRSSRPGGSQRRRAP*CPGTAR Trigger: CCGAGCAGTACCCGGGCAGCATGGCGCGCGCCTACG...CTGCGACCCACCCGGTCTACTACTCCTAGGCCTTGCGGCCCTGAGAACGCCTAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
||
| CDS-3UTR GCA 90 bp | TGCCAGCGCCACAGCGAGCTTCCCTGGCTATTATGTTACCGCTCTGAGCGGCGGTCAGCGGCCGAACCCTaGGGCGACCCCCGCAGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: CQRHSELPWLLCYRSERRSAAEP*GDPRSD Trigger: GTCGCTGCGGGGGTCGCCGCAGGGTTCGGCCGCTGA...CCGCCGCTCAGAGCGGTAACATAATAGCCAGGGAAGCTCGCTGTGGCGCTGGCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
||
| CDS-3UTR TCA 90 bp | GCTGCGGACGCCGCGACCCCGGGAACCCCGCGCCCTTCTTCCCTCGGCACAGTCAGATGCCATTCAGAGTaGTCTTCTTGTCCGGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: AADAATPGTPRPSSLGTVRCHSE*SSCPGH Trigger: ATGCCCCGGACAAGAAGATCACTCTGAATGGCATCT...GACTGTGCCGAGGGAAGAAGGGCGCGGGGTTCCCGGGGTCGCGGCGTCCGCAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
||
| CDS-3UTR GCA 90 bp | CTAGGCGTTCTCAGGGCCGCAAGGCCTAGGAGTAGTAGACCGGGTGGGTCGCAGGGGACGAAGAGCTGCTaGTGGTCGCTGGAGGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: LGVLRAARPRSSRPGGSQGTKSC*WSLEAA Trigger: CGCTGCCTCCAGCGACCAGCAGCAGCTCTTCGTCCC...CTGCGACCCACCCGGTCTACTACTCCTAGGCCTTGCGGCCCTGAGAACGCCTAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
||
| CDS-3UTR CCA 90 bp | CAAACAGAAGCCGGCCGGCCGCCCGCCGCAGCGGGTAATTACAGCTCATTAGCTCCGAACTGCCCGCACTaGAGCTCTGGCTGCAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QTEAGRPPAAAGNYSSLAPNCPH*SSGCRG Trigger: CCCCCTGCAGCCAGAGCTCCAGTGCGGGCAGTTCGG...AGCTAATGAGCTGTAATTACCCGCTGCGGCGGGCGGCCGGCCGGCTTCTGTTTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
||
| CDS-3UTR TCA 90 bp | TGCCAGCGCCACAGCGAGCTTCCCTGGCTATTATGTTACCGCTCTGAGCGGCGGGGGTACTGCTCGGCGTaGGCAGGGTGCGAGTACACG | + |
|
Preference number: 4 (lower is better) Translates to: CQRHSELPWLLCYRSERRGYCSA*AGCEYT Trigger: CGTGTACTCGCACCCTGCTCACGCCGAGCAGTACCC...CCGCCGCTCAGAGCGGTAACATAATAGCCAGGGAAGCTCGCTGTGGCGCTGGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
||
| CDS-3UTR TCA 90 bp | TGCTGCGGACGCCGCGACCCCGGGAACCCCGCGCCCTTCTTCCCTCGGCACAGTGCAGGGAAAGCCATCTaGCAGCTACTATTCCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: CCGRRDPGNPAPFFPRHSAGKAI*QLLFPF Trigger: GAATGGGAATAGTAGCTGTCAGATGGCTTTCCCTGC...ACTGTGCCGAGGGAAGAAGGGCGCGGGGTTCCCGGGGTCGCGGCGTCCGCAGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
||
| CDS-3UTR GCA 90 bp | CAAACAGAAGCCGGCCGGCCGCCCGCCGCAGCGGGTAATTACAGCTCATTAGCTTCCCGCTCGACAAGCTaGTGCTGCTGCTGTCGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QTEAGRPPAAAGNYSSLASRSTS*CCCCRG Trigger: GCCCCGACAGCAGCAGCAGCAGCTTGTCGAGCGGGA...AGCTAATGAGCTGTAATTACCCGCTGCGGCGGGCGGCCGGCCGGCTTCTGTTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
||
| CDS-3UTR CCA 90 bp | TGCCAGCGCCACAGCGAGCTTCCCTGGCTATTATGTTACCGCTCTGAGCGGCGGGCTGCTGCTGGTCGCTaGAGGCAGCGAGTAGTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: CQRHSELPWLLCYRSERRAAAGR*RQRVVG Trigger: CCCGACTACTCGCTGCCTCCAGCGACCAGCAGCAGC...CCGCCGCTCAGAGCGGTAACATAATAGCCAGGGAAGCTCGCTGTGGCGCTGGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
||
| CDS-3UTR GCA 90 bp | TGCCAGCGCCACAGCGAGCTTCCCTGGCTATTATGTTACCGCTCTGAGCGGCGGCGCTCGACAAGCTGCTaGTGCTGCTGTCGGGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CQRHSELPWLLCYRSERRRSTSC*CCCRGS Trigger: AGAGCCCCGACAGCAGCAGCAGCAGCTTGTCGAGCG...CCGCCGCTCAGAGCGGTAACATAATAGCCAGGGAAGCTCGCTGTGGCGCTGGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
||
| CDS-3UTR CCA 90 bp | CTAGGCGTTCTCAGGGCCGCAAGGCCTAGGAGTAGTAGACCGGGTGGGTCGCAGACGAAGAGCTGCTGCTaGTCGCTGGAGGCAGCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LGVLRAARPRSSRPGGSQTKSCC*SLEAAS Trigger: ACTCGCTGCCTCCAGCGACCAGCAGCAGCTCTTCGT...CTGCGACCCACCCGGTCTACTACTCCTAGGCCTTGCGGCCCTGAGAACGCCTAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
||
| CDS-3UTR GCA 90 bp | TGCCAGCGCCACAGCGAGCTTCCCTGGCTATTATGTTACCGCTCTGAGCGGCGGGCCCAGGTCTCCACCTaGCTGGTTCAGGTACCACGA | + |
|
Preference number: 4 (lower is better) Translates to: CQRHSELPWLLCYRSERRAQVST*LVQVPR Trigger: TCGTGGTACCTGAACCAGGCAGGTGGAGACCTGGGC...CCGCCGCTCAGAGCGGTAACATAATAGCCAGGGAAGCTCGCTGTGGCGCTGGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
||
| CDS-3UTR CCA 90 bp | CAAACAGAAGCCGGCCGGCCGCCCGCCGCAGCGGGTAATTACAGCTCATTAGCTAGGTCTCCACCTGCCTaGTTCAGGTACCACGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QTEAGRPPAAAGNYSSLARSPPA*FRYHEV Trigger: CACCTCGTGGTACCTGAACCAGGCAGGTGGAGACCT...AGCTAATGAGCTGTAATTACCCGCTGCGGCGGGCGGCCGGCCGGCTTCTGTTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
||
| 3UTR CAA 72 bp | CCGCGGGTCTCCACTCGCCACCCCCTGTCCAAACAGTaGAAAACGGACATCCTGAGAACCGTCCAGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PRVSTRHPLSKQ*KTDILRTVQPP Trigger: AGGAGGCTGGACGGTTCTCAGGATGTCCGTTTTCAACTGTTTGGACAGGGGGTGGCGAGTGGAGACCCGCGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
||
| CDS-3UTR CCA 90 bp | ACCCAACTTGGGACACCACACTGGGTGCACAAATCCCAGCGCCACGCTGTGACTGCTTCACCATGTCCTTaGGCTGCGGCTGCGGCGTAT | + |
|
Preference number: 4 (lower is better) Translates to: TQLGTPHWVHKSQRHAVTASPCP*AAAAAY Trigger: ATACGCCGCAGCCGCAGCCCAAGGACATGGTGAAGC...AGTCACAGCGTGGCGCTGGGATTTGTGCACCCAGTGTGGTGTCCCAAGTTGGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
||
| CDS-3UTR CCA 90 bp | TGCCAGCGCCACAGCGAGCTTCCCTGGCTATTATGTTACCGCTCTGAGCGGCGGATTTCCCGCACCGAGTaGAAGTTCTGCTGCTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CQRHSELPWLLCYRSERRISRTE*KFCCWP Trigger: TGGCCAGCAGCAGAACTTCCACTCGGTGCGGGAAAT...CCGCCGCTCAGAGCGGTAACATAATAGCCAGGGAAGCTCGCTGTGGCGCTGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
||
| CDS-3UTR CCA 90 bp | CTAGGCGTTCTCAGGGCCGCAAGGCCTAGGAGTAGTAGACCGGGTGGGTCGCAGGGTACAGAGACTGACTaGCAGGGAAAGCCATCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LGVLRAARPRSSRPGGSQGTETD*QGKPSD Trigger: GTCAGATGGCTTTCCCTGCCAGTCAGTCTCTGTACC...CTGCGACCCACCCGGTCTACTACTCCTAGGCCTTGCGGCCCTGAGAACGCCTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
||
| CDS-3UTR TCA 90 bp | ACCCAACTTGGGACACCACACTGGGTGCACAAATCCCAGCGCCACGCTGTGACTGTGCGGTACAGAGACTaGCTGGCAGGGAAAGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: TQLGTPHWVHKSQRHAVTVRYRD*LAGKAI Trigger: GATGGCTTTCCCTGCCAGTCAGTCTCTGTACCGCAC...AGTCACAGCGTGGCGCTGGGATTTGTGCACCCAGTGTGGTGTCCCAAGTTGGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
||
| CDS-3UTR TCA 90 bp | ACCCAACTTGGGACACCACACTGGGTGCACAAATCCCAGCGCCACGCTGTGACTTTCAAGCCGATCCGCTaGGACTCGAACATTTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: TQLGTPHWVHKSQRHAVTFKPIR*DSNISR Trigger: GCGGGAAATGTTCGAGTCTCAGCGGATCGGCTTGAA...AGTCACAGCGTGGCGCTGGGATTTGTGCACCCAGTGTGGTGTCCCAAGTTGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
||
| CDS-3UTR GCA 90 bp | ACTGTGGTAACACTGGTGCTGATTCATGGACTTAAAAATCGCCAAATCATGTTCTCGGCCCTGGTGGGATaGAGGGTGGTGGCTGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TVVTLVLIHGLKNRQIMFSALVG*RVVAGL Trigger: GAGGCCAGCCACCACCCTGCATCCCACCAGGGCCGA...GAACATGATTTGGCGATTTTTAAGTCCATGAATCAGCACCAGTGTTACCACAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
||
| CDS-3UTR GCA 90 bp | ATAGTTTACGGTTTTGCTTACTTAGATAAGGCAAAAATGGAGGAGGTTCTGCATAGGCGCGCGCCATGCTaGCCGGGTACTGCTCGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: IVYGFAYLDKAKMEEVLHRRAPC*PGTARR Trigger: ACGCCGAGCAGTACCCGGGCAGCATGGCGCGCGCCT...ATGCAGAACCTCCTCCATTTTTGCCTTATCTAAGTAAGCAAAACCGTAAACTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
||
| CDS-3UTR GCA 90 bp | ACTGTGGTAACACTGGTGCTGATTCATGGACTTAAAAATCGCCAAATCATGTTCGGCGGTTCTTGGAGGTaGAGCCGGCCCTTCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TVVTLVLIHGLKNRQIMFGGSWR*SRPFSS Trigger: GGAGGAGAAGGGCCGGCTGCACCTCCAAGAACCGCC...GAACATGATTTGGCGATTTTTAAGTCCATGAATCAGCACCAGTGTTACCACAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
||
| CDS-3UTR CCA 90 bp | ACTGTGGTAACACTGGTGCTGATTCATGGACTTAAAAATCGCCAAATCATGTTCCGGGGCTCTCGATTTTaGGCACTGTGGCGGCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TVVTLVLIHGLKNRQIMFRGSRF*ALWRRC Trigger: GCAGCGCCGCCACAGTGCCCAAAATCGAGAGCCCCG...GAACATGATTTGGCGATTTTTAAGTCCATGAATCAGCACCAGTGTTACCACAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
||
| CDS-3UTR CCA 90 bp | ATAGTTTACGGTTTTGCTTACTTAGATAAGGCAAAAATGGAGGAGGTTCTGCATGGCGGTGGCGGTTCTTaGAGGTGCAGCCGGCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: IVYGFAYLDKAKMEEVLHGGGGS*RCSRPF Trigger: GAAGGGCCGGCTGCACCTCCAAGAACCGCCACCGCC...ATGCAGAACCTCCTCCATTTTTGCCTTATCTAAGTAAGCAAAACCGTAAACTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
||
| CDS-3UTR GCA 90 bp | TACCAACACCTTTCTAGACACACACATGTTCCATTCTTAATTTTTCAAACCTGCCGAAAGCCCCCGACGTaGGGTACAGAGACTGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: YQHLSRHTHVPFLIFQTCRKPPT*GTETDW Trigger: CCAGTCAGTCTCTGTACCGCACGTCGGGGGCTTTCG...GCAGGTTTGAAAAATTAAGAATGGAACATGTGTGTGTCTAGAAAGGTGTTGGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
||
| CDS-3UTR TCA 90 bp | ATAGTTTACGGTTTTGCTTACTTAGATAAGGCAAAAATGGAGGAGGTTCTGCATTACCGTTCTCCGTCTTaGTGTCCTGGATGCGCACGG | + |
|
Preference number: 4 (lower is better) Translates to: IVYGFAYLDKAKMEEVLHYRSPS*CPGCAR Trigger: CCGTGCGCATCCAGGACATCAAGACGGAGAACGGTA...ATGCAGAACCTCCTCCATTTTTGCCTTATCTAAGTAAGCAAAACCGTAAACTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
||
| CDS-3UTR GCA 90 bp | ATAGTTTACGGTTTTGCTTACTTAGATAAGGCAAAAATGGAGGAGGTTCTGCATACAAGCTGCTGCTGCTaGTGTCGGGGCTCTCGATTT | + |
|
Preference number: 4 (lower is better) Translates to: IVYGFAYLDKAKMEEVLHTSCCC*CRGSRF Trigger: AAATCGAGAGCCCCGACAGCAGCAGCAGCAGCTTGT...ATGCAGAACCTCCTCCATTTTTGCCTTATCTAAGTAAGCAAAACCGTAAACTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
||
| 3UTR CAA 72 bp | GGAACCGAGCGAATCAGAGGCCACGTAAGGCAGTTTTaGACTGAAATTAGAGTGTATTTATTTGCAGCAATC | + |
|
Preference number: 4 (lower is better) Translates to: GTERIRGHVRQF*TEIRVYLFAAI Trigger: GATTGCTGCAAATAAATACACTCTAATTTCAGTCAAAAACTGCCTTACGTGGCCTCTGATTCGCTCGGTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
||
| CDS GCA 90 bp | GCTGTGATGCGGCGGCGGCGCAGGCTGTGGCGGCGGCGCGGGTTCTaGAGCGTCCAGGCTGAGCGGCCGCGCCGACGGCAGGCTGCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: AVMRRRRRLWRRRGF*SVQAERPRRRQAAR Trigger: CCGGGCAGCCTGCCGTCGGCGCGGCCGCTCAGCCTGGACGCTGCAGAACCCGCGCCGCCGCCACAGCCTGCGCCGCCGCCGCATCACAGC 80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
||
| CDS GCA 90 bp | AGGGGGTCGTCCACCGCCGCGCTGCCCGCGCCTCCCGCCGGACCCTaGAAGTGGCCGCCACGCTCGCCCGCCGCGTACAGGCTCATAGCC | + |
|
Preference number: 5 (lower is better) Translates to: RGSSTAALPAPPAGP*KWPPRSPAAYRLIA Trigger: GGCTATGAGCCTGTACGCGGCGGGCGAGCGTGGCGGCCACTTGCAGGGTCCGGCGGGAGGCGCGGGCAGCGCGGCGGTGGACGACCCCCT 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
||
| CDS CCA 90 bp | CTGCTCCGGGGGCGCGGGCGCGGGCTGGCGGCCGGCCTGCGGCGGTaGCGGTTCTTGGAGGTGCAGCCGGCCCTTCTCCTCCTTGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LLRGRGRGLAAGLRR*RFLEVQPALLLLVL Trigger: AAGGACAAGGAGGAGAAGGGCCGGCTGCACCTCCAAGAACCGCCACCGCCGCAGGCCGGCCGCCAGCCCGCGCCCGCGCCCCCGGAGCAG 77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
||
| CDS CCA 90 bp | TCGTCCACCGCCGCGCTGCCCGCGCCTCCCGCCGGACCCTGCAAGTaGCCGCCACGCTCGCCCGCCGCGTACAGGCTCATAGCCTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SSTAALPAPPAGPCK*PPRSPAAYRLIACR Trigger: CCTGCAGGCTATGAGCCTGTACGCGGCGGGCGAGCGTGGCGGCCACTTGCAGGGTCCGGCGGGAGGCGCGGGCAGCGCGGCGGTGGACGA 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| CDS CCA 90 bp | GGCGCGGGCGCGGGCTGGCGGCCGGCCTGCGGCGGTGGCGGTTCTTaGAGGTGCAGCCGGCCCTTCTCCTCCTTGTCCTTCACTGCGTCC | + |
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Preference number: 5 (lower is better) Translates to: GAGAGWRPACGGGGS*RCSRPFSSLSFTAS Trigger: GGACGCAGTGAAGGACAAGGAGGAGAAGGGCCGGCTGCACCTCCAAGAACCGCCACCGCCGCAGGCCGGCCGCCAGCCCGCGCCCGCGCC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| CDS TCA 90 bp | GGGACAGGGGCTGGGGAGGCGAGGGACACGTACCGTTCTCCGTCTTaGTGTCCTGGATGCGCACGGGCGGCGGCTGTGGCCCGGGAGCGG | + |
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Preference number: 5 (lower is better) Translates to: GTGAGEARDTYRSPS*CPGCARAAAVARER Trigger: CCGCTCCCGGGCCACAGCCGCCGCCCGTGCGCATCCAGGACATCAAGACGGAGAACGGTACGTGTCCCTCGCCTCCCCAGCCCCTGTCCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| CDS CCA 90 bp | GGCTGGGGAGGCGAGGGACACGTACCGTTCTCCGTCTTGATGTCCTaGATGCGCACGGGCGGCGGCTGTGGCCCGGGAGCGGAGCCCTCG | + |
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Preference number: 5 (lower is better) Translates to: GWGGEGHVPFSVLMS*MRTGGGCGPGAEPS Trigger: CGAGGGCTCCGCTCCCGGGCCACAGCCGCCGCCCGTGCGCATCCAGGACATCAAGACGGAGAACGGTACGTGTCCCTCGCCTCCCCAGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| CDS GCA 90 bp | CCTTGGGCTGCGGCTGCGGCGTATAAGGCCCGTAGGCGCGCGCCATaGTGCCCGGGTACTGCTCGGCGTGAGCAGGGTGCGAGTACACGC | + |
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Preference number: 5 (lower is better) Translates to: PWAAAAAYKARRRAP*CPGTARREQGASTR Trigger: GCGTGTACTCGCACCCTGCTCACGCCGAGCAGTACCCGGGCAGCATGGCGCGCGCCTACGGGCCTTATACGCCGCAGCCGCAGCCCAAGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| CDS GCA 90 bp | GGCGCGGGCTGGCGGCCGGCCTGCGGCGGTGGCGGTTCTTGGAGGTaGAGCCGGCCCTTCTCCTCCTTGTCCTTCACTGCGTCCTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: GAGWRPACGGGGSWR*SRPFSSLSFTASFF Trigger: GAAGAAGGACGCAGTGAAGGACAAGGAGGAGAAGGGCCGGCTGCACCTCCAAGAACCGCCACCGCCGCAGGCCGGCCGCCAGCCCGCGCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| CDS GCA 90 bp | GCCGCCGAGGCCAGGAGGCCGGAACCGAGCTCAGCGGCCGAACCCTaGGGCGACCCCCGCAGCGACGTCATGATGTTGTCCACGCTGAAG | + |
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Preference number: 5 (lower is better) Translates to: AAEARRPEPSSAAEP*GDPRSDVMMLSTLK Trigger: CTTCAGCGTGGACAACATCATGACGTCGCTGCGGGGGTCGCCGCAGGGTTCGGCCGCTGAGCTCGGTTCCGGCCTCCTGGCCTCGGCGGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| CDS GCA 90 bp | GGCTGGCCTCCTGGCCGCCCCCGCCATGACTCAGGGACGAAGAGCTaGTGCTGGTCGCTGGAGGCAGCGAGTAGTCGGGCAGGGGGTCGT | + |
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Preference number: 5 (lower is better) Translates to: GWPPGRPRHDSGTKS*CWSLEAASSRAGGR Trigger: ACGACCCCCTGCCCGACTACTCGCTGCCTCCAGCGACCAGCAGCAGCTCTTCGTCCCTGAGTCATGGCGGGGGCGGCCAGGAGGCCAGCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| CDS CCA 90 bp | TCCCGCTCGACAAGCTGCTGCTGCTGCTGTCGGGGCTCTCGATTTTaGGCACTGTGGCGGCGCTGCCGCTGCCTAGGGCGGCAGCCGGGG | + |
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Preference number: 5 (lower is better) Translates to: SRSTSCCCCCRGSRF*ALWRRCRCLGRQPG Trigger: CCCCGGCTGCCGCCCTAGGCAGCGGCAGCGCCGCCACAGTGCCCAAAATCGAGAGCCCCGACAGCAGCAGCAGCAGCTTGTCGAGCGGGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| CDS CCA 90 bp | GCAGCCGCCGCCGCGCTCGCCAAGTGGCCCAGGTCTCCACCTGCCTaGTTCAGGTACCACGAGGTGAGTCGGCCCTGGTGGGATGCAGGG | + |
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Preference number: 5 (lower is better) Translates to: AAAAALAKWPRSPPA*FRYHEVSRPWWDAG Trigger: CCCTGCATCCCACCAGGGCCGACTCACCTCGTGGTACCTGAACCAGGCAGGTGGAGACCTGGGCCACTTGGCGAGCGCGGCGGCGGCTGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| CDS-3UTR CAA 90 bp | TGCTGCGGACGCCGCGACCCCGGGAACCCCGCGCCCTTCTTCCCTCGGCACAGTGGCTTCACCATGTCCTaGGGCTGCGGCTGCGGCGTA | + |
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Preference number: 5 (lower is better) Translates to: CCGRRDPGNPAPFFPRHSGFTMS*GCGCGV Trigger: TACGCCGCAGCCGCAGCCCAAGGACATGGTGAAGCC...ACTGTGCCGAGGGAAGAAGGGCGCGGGGTTCCCGGGGTCGCGGCGTCCGCAGCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| CDS GCA 90 bp | TGGGCTGCGGCTGCGGCGTATAAGGCCCGTAGGCGCGCGCCATGCTaGCCGGGTACTGCTCGGCGTGAGCAGGGTGCGAGTACACGCTCA | + |
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Preference number: 5 (lower is better) Translates to: WAAAAAYKARRRAPC*PGTARREQGASTRS Trigger: TGAGCGTGTACTCGCACCCTGCTCACGCCGAGCAGTACCCGGGCAGCATGGCGCGCGCCTACGGGCCTTATACGCCGCAGCCGCAGCCCA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| CDS GCA 90 bp | TGGCCTCCTGGCCGCCCCCGCCATGACTCAGGGACGAAGAGCTGCTaGTGGTCGCTGGAGGCAGCGAGTAGTCGGGCAGGGGGTCGTCCA | + |
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Preference number: 5 (lower is better) Translates to: WPPGRPRHDSGTKSC*WSLEAASSRAGGRP Trigger: TGGACGACCCCCTGCCCGACTACTCGCTGCCTCCAGCGACCAGCAGCAGCTCTTCGTCCCTGAGTCATGGCGGGGGCGGCCAGGAGGCCA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| CDS-3UTR CAA 90 bp | TCCCAGCCCCGAGCGGCGTCCTGGAAGCCGGCGTCGGGGCTGGACGCCACTCCGAGCGACGTCATGATGTaGTCCACGCTGAAGCCCTGG | + |
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Preference number: 5 (lower is better) Translates to: SQPRAASWKPASGLDATPSDVMM*STLKPW Trigger: CCAGGGCTTCAGCGTGGACAACATCATGACGTCGCT...CGGAGTGGCGTCCAGCCCCGACGCCGGCTTCCAGGACGCCGCTCGGGGCTGGGA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| CDS-3UTR CAA 90 bp | TGCCAGCGCCACAGCGAGCTTCCCTGGCTATTATGTTACCGCTCTGAGCGGCGGTCGGGGCTCTCGATTTaGGGCACTGTGGCGGCGCTG | + |
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Preference number: 5 (lower is better) Translates to: CQRHSELPWLLCYRSERRSGLSI*GTVAAL Trigger: CAGCGCCGCCACAGTGCCCAAAATCGAGAGCCCCGA...CCGCCGCTCAGAGCGGTAACATAATAGCCAGGGAAGCTCGCTGTGGCGCTGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| CDS-3UTR CAA 90 bp | TGCCAGCGCCACAGCGAGCTTCCCTGGCTATTATGTTACCGCTCTGAGCGGCGGCGGCCCTTCTCCTCCTaGTCCTTCACTGCGTCCTTC | + |
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Preference number: 5 (lower is better) Translates to: CQRHSELPWLLCYRSERRRPFSS*SFTASF Trigger: GAAGGACGCAGTGAAGGACAAGGAGGAGAAGGGCCG...CCGCCGCTCAGAGCGGTAACATAATAGCCAGGGAAGCTCGCTGTGGCGCTGGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| CDS-3UTR CAA 90 bp | CAAACAGAAGCCGGCCGGCCGCCCGCCGCAGCGGGTAATTACAGCTCATTAGCTGTACCGTTCTCCGTCTaGATGTCCTGGATGCGCACG | + |
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Preference number: 5 (lower is better) Translates to: QTEAGRPPAAAGNYSSLAVPFSV*MSWMRT Trigger: CGTGCGCATCCAGGACATCAAGACGGAGAACGGTAC...AGCTAATGAGCTGTAATTACCCGCTGCGGCGGGCGGCCGGCCGGCTTCTGTTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| CDS TCA 90 bp | CAGCTACTATTCCCATTCACCGGGGAGTTGTTCAAGCCGATCCGCTaGGACTCGAACATTTCCCGCACCGAGTGGAAGTTCTGCTGCTGG | + |
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Preference number: 5 (lower is better) Translates to: QLLFPFTGELFKPIR*DSNISRTEWKFCCW Trigger: CCAGCAGCAGAACTTCCACTCGGTGCGGGAAATGTTCGAGTCTCAGCGGATCGGCTTGAACAACTCCCCGGTGAATGGGAATAGTAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| CDS CCA 90 bp | TACAGTCATAGACGAAAGCCCCCGACGTGCGGTACAGAGACTGACTaGCAGGGAAAGCCATCTGACAGCTACTATTCCCATTCACCGGGG | + |
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Preference number: 5 (lower is better) Translates to: YSHRRKPPTCGTETD*QGKPSDSYYSHSPG Trigger: CCCCGGTGAATGGGAATAGTAGCTGTCAGATGGCTTTCCCTGCCAGTCAGTCTCTGTACCGCACGTCGGGGGCTTTCGTCTATGACTGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| CDS CAA 90 bp | GGGCGCGGGCGCGGGCTGGCGGCCGGCCTGCGGCGGTGGCGGTTCTaGGAGGTGCAGCCGGCCCTTCTCCTCCTTGTCCTTCACTGCGTC | + |
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Preference number: 6 (lower is better) Translates to: GRGRGLAAGLRRWRF*EVQPALLLLVLHCV Trigger: GACGCAGTGAAGGACAAGGAGGAGAAGGGCCGGCTGCACCTCCAAGAACCGCCACCGCCGCAGGCCGGCCGCCAGCCCGCGCCCGCGCCC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| CDS GCA 72 bp | GCGGCTGCGGCGTATAAGGCCCGTAGGCGCGCGCCATaGTGCCCGGGTACTGCTCGGCGTGAGCAGGGTGCG | + |
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Preference number: 6 (lower is better) Translates to: AAAAYKARRRAP*CPGTARREQGA Trigger: CGCACCCTGCTCACGCCGAGCAGTACCCGGGCAGCATGGCGCGCGCCTACGGGCCTTATACGCCGCAGCCGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| CDS CCA 72 bp | TGCTGCTGCTGTCGGGGCTCTCGATTTTGGGCACTGTaGCGGCGCTGCCGCTGCCTAGGGCGGCAGCCGGGG | + |
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Preference number: 6 (lower is better) Translates to: CCCCRGSRFWAL*RRCRCLGRQPG Trigger: CCCCGGCTGCCGCCCTAGGCAGCGGCAGCGCCGCCACAGTGCCCAAAATCGAGAGCCCCGACAGCAGCAGCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| CDS CAA 90 bp | CTCCCGCTCGACAAGCTGCTGCTGCTGCTGTCGGGGCTCTCGATTTaGGGCACTGTGGCGGCGCTGCCGCTGCCTAGGGCGGCAGCCGGG | + |
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Preference number: 6 (lower is better) Translates to: LPLDKLLLLLSGLSI*GTVAALPLPRAAAG Trigger: CCCGGCTGCCGCCCTAGGCAGCGGCAGCGCCGCCACAGTGCCCAAAATCGAGAGCCCCGACAGCAGCAGCAGCAGCTTGTCGAGCGGGAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| CDS GCA 72 bp | TGGCGGCCGGCCTGCGGCGGTGGCGGTTCTTGGAGGTaGAGCCGGCCCTTCTCCTCCTTGTCCTTCACTGCG | + |
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Preference number: 6 (lower is better) Translates to: WRPACGGGGSWR*SRPFSSLSFTA Trigger: CGCAGTGAAGGACAAGGAGGAGAAGGGCCGGCTGCACCTCCAAGAACCGCCACCGCCGCAGGCCGGCCGCCA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| CDS GCA 72 bp | GCCAGGAGGCCGGAACCGAGCTCAGCGGCCGAACCCTaGGGCGACCCCCGCAGCGACGTCATGATGTTGTCC | + |
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Preference number: 6 (lower is better) Translates to: ARRPEPSSAAEP*GDPRSDVMMLS Trigger: GGACAACATCATGACGTCGCTGCGGGGGTCGCCGCAGGGTTCGGCCGCTGAGCTCGGTTCCGGCCTCCTGGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| CDS GCA 72 bp | CGCCGCCGCGCTCGCCAAGTGGCCCAGGTCTCCACCTaGCTGGTTCAGGTACCACGAGGTGAGTCGGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: RRRARQVAQVST*LVQVPRGESAL Trigger: CAGGGCCGACTCACCTCGTGGTACCTGAACCAGGCAGGTGGAGACCTGGGCCACTTGGCGAGCGCGGCGGCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| CDS CCA 72 bp | GGCGAGGGACACGTACCGTTCTCCGTCTTGATGTCCTaGATGCGCACGGGCGGCGGCTGTGGCCCGGGAGCG | + |
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Preference number: 6 (lower is better) Translates to: GEGHVPFSVLMS*MRTGGGCGPGA Trigger: CGCTCCCGGGCCACAGCCGCCGCCCGTGCGCATCCAGGACATCAAGACGGAGAACGGTACGTGTCCCTCGCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| CDS TCA 72 bp | GCTGGGGAGGCGAGGGACACGTACCGTTCTCCGTCTTaGTGTCCTGGATGCGCACGGGCGGCGGCTGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: AGEARDTYRSPS*CPGCARAAAVA Trigger: GGCCACAGCCGCCGCCCGTGCGCATCCAGGACATCAAGACGGAGAACGGTACGTGTCCCTCGCCTCCCCAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| CDS GCA 72 bp | CCTGGCCGCCCCCGCCATGACTCAGGGACGAAGAGCTaGTGCTGGTCGCTGGAGGCAGCGAGTAGTCGGGCA | + |
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Preference number: 6 (lower is better) Translates to: PGRPRHDSGTKS*CWSLEAASSRA Trigger: TGCCCGACTACTCGCTGCCTCCAGCGACCAGCAGCAGCTCTTCGTCCCTGAGTCATGGCGGGGGCGGCCAGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| CDS CAA 72 bp | GGCTGGGGAGGCGAGGGACACGTACCGTTCTCCGTCTaGATGTCCTGGATGCGCACGGGCGGCGGCTGTGGC | + |
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Preference number: 6 (lower is better) Translates to: GWGGEGHVPFSV*MSWMRTGGGCG Trigger: GCCACAGCCGCCGCCCGTGCGCATCCAGGACATCAAGACGGAGAACGGTACGTGTCCCTCGCCTCCCCAGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| CDS CCA 72 bp | ACAAGCTGCTGCTGCTGCTGTCGGGGCTCTCGATTTTaGGCACTGTGGCGGCGCTGCCGCTGCCTAGGGCGG | + |
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Preference number: 6 (lower is better) Translates to: TSCCCCCRGSRF*ALWRRCRCLGR Trigger: CCGCCCTAGGCAGCGGCAGCGCCGCCACAGTGCCCAAAATCGAGAGCCCCGACAGCAGCAGCAGCAGCTTGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| CDS CAA 72 bp | GACAAGCTGCTGCTGCTGCTGTCGGGGCTCTCGATTTaGGGCACTGTGGCGGCGCTGCCGCTGCCTAGGGCG | + |
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Preference number: 6 (lower is better) Translates to: DKLLLLLSGLSI*GTVAALPLPRA Trigger: CGCCCTAGGCAGCGGCAGCGCCGCCACAGTGCCCAAAATCGAGAGCCCCGACAGCAGCAGCAGCAGCTTGTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| CDS TCA 72 bp | CCAGGTCTCCACCTGCCTGGTTCAGGTACCACGAGGTaGGTCGGCCCTGGTGGGATGCAGGGTGGTGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: PGLHLPGSGTTR*VGPGGMQGGGW Trigger: CCAGCCACCACCCTGCATCCCACCAGGGCCGACTCACCTCGTGGTACCTGAACCAGGCAGGTGGAGACCTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| CDS CCA 72 bp | GCCATGACTCAGGGACGAAGAGCTGCTGCTGGTCGCTaGAGGCAGCGAGTAGTCGGGCAGGGGGTCGTCCAC | + |
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Preference number: 6 (lower is better) Translates to: AMTQGRRAAAGR*RQRVVGQGVVH Trigger: GTGGACGACCCCCTGCCCGACTACTCGCTGCCTCCAGCGACCAGCAGCAGCTCTTCGTCCCTGAGTCATGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| CDS TCA 72 bp | TTCCCATTCACCGGGGAGTTGTTCAAGCCGATCCGCTaGGACTCGAACATTTCCCGCACCGAGTGGAAGTTC | + |
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Preference number: 6 (lower is better) Translates to: FPFTGELFKPIR*DSNISRTEWKF Trigger: GAACTTCCACTCGGTGCGGGAAATGTTCGAGTCTCAGCGGATCGGCTTGAACAACTCCCCGGTGAATGGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| CDS CCA 72 bp | AGACGAAAGCCCCCGACGTGCGGTACAGAGACTGACTaGCAGGGAAAGCCATCTGACAGCTACTATTCCCAT | + |
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Preference number: 6 (lower is better) Translates to: RRKPPTCGTETD*QGKPSDSYYSH Trigger: ATGGGAATAGTAGCTGTCAGATGGCTTTCCCTGCCAGTCAGTCTCTGTACCGCACGTCGGGGGCTTTCGTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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| CDS GCA 72 bp | AGAATTTGCTACAGTCATAGACGAAAGCCCCCGACGTaGGGTACAGAGACTGACTGGCAGGGAAAGCCATCT | + |
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Preference number: 6 (lower is better) Translates to: RICYSHRRKPPT*GTETDWQGKPS Trigger: AGATGGCTTTCCCTGCCAGTCAGTCTCTGTACCGCACGTCGGGGGCTTTCGTCTATGACTGTAGCAAATTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062292.5 |
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