Pregenerated sensors for FOXB2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056829Ensembl transcript IDs: ENSMUST00000072915.4
Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
CDS GCA 90 bp | CCCGTAGGGTGGGAACTGAGACAGACGCCCCACGCTGCCCACCGCTaGGGCCGCCGCCGCTGCTGCGGCCGCCGCCACGGCCGCCGCCTC | + |
Preference number: 5 (lower is better) Translates to: PVGWELRQTPHAAHR*GRRRCCGRRHGRRL Trigger: GAGGCGGCGGCCGTGGCGGCGGCCGCAGCAGCGGCGGCGGCCGCAGCGGTGGGCAGCGTGGGGCGTCTGTCTCAGTTCCCACCCTACGGG 80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072915.4 |
||
CDS CCA 90 bp | GGCGGCTGCAGCGGCGGCGGCGGCGGCCGAGCCCAGCCCGTAGGGTaGGAACTGAGACAGACGCCCCACGCTGCCCACCGCTGCGGCCGC | + |
Preference number: 5 (lower is better) Translates to: GGCSGGGGGRAQPVG*ELRQTPHAAHRCGR Trigger: GCGGCCGCAGCGGTGGGCAGCGTGGGGCGTCTGTCTCAGTTCCCACCCTACGGGCTGGGCTCGGCCGCCGCCGCCGCCGCTGCAGCCGCC 80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072915.4 |
||
CDS GCA 90 bp | GACGTCTGCGGAGGCTGCGACTGCGGCTGTGGCTGCTGCGCGGGCTaGGACGGGAGGTGTGGAGGCTGCGGAGCCGGAGCCGGCTGCTGG | + |
Preference number: 5 (lower is better) Translates to: DVCGGCDCGCGCCAG*DGRCGGCGAGAGCW Trigger: CCAGCAGCCGGCTCCGGCTCCGCAGCCTCCACACCTCCCGTCGCAGCCCGCGCAGCAGCCACAGCCGCAGTCGCAGCCTCCGCAGACGTC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072915.4 |
||
CDS GCA 90 bp | CCGGGATGGGACGTCTGCGGAGGCTGCGACTGCGGCTGTGGCTGCTaGGCGGGCTGCGACGGGAGGTGTGGAGGCTGCGGAGCCGGAGCC | + |
Preference number: 5 (lower is better) Translates to: PGWDVCGGCDCGCGC*AGCDGRCGGCGAGA Trigger: GGCTCCGGCTCCGCAGCCTCCACACCTCCCGTCGCAGCCCGCGCAGCAGCCACAGCCGCAGTCGCAGCCTCCGCAGACGTCCCATCCCGG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072915.4 |
||
CDS GCA 90 bp | GGTGAGGCGGCGGCCGCGCACACGGTGGAGGGAGCAGGCAGCTGCTaGGACGCCGTGGGGACAGACAACGCCGGCGGCAGCGTGGTCACG | + |
Preference number: 5 (lower is better) Translates to: GEAAAAHTVEGAGSC*DAVGTDNAGGSVVT Trigger: CGTGACCACGCTGCCGCCGGCGTTGTCTGTCCCCACGGCGTCGCAGCAGCTGCCTGCTCCCTCCACCGTGTGCGCGGCCGCCGCCTCACC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072915.4 |
||
CDS GCA 90 bp | GTGGGTGAGGCGGCGGCCGCGCACACGGTGGAGGGAGCAGGCAGCTaGTGCGACGCCGTGGGGACAGACAACGCCGGCGGCAGCGTGGTC | + |
Preference number: 5 (lower is better) Translates to: VGEAAAAHTVEGAGS*CDAVGTDNAGGSVV Trigger: GACCACGCTGCCGCCGGCGTTGTCTGTCCCCACGGCGTCGCAGCAGCTGCCTGCTCCCTCCACCGTGTGCGCGGCCGCCGCCTCACCCAC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072915.4 |
||
CDS CCA 90 bp | CGGCCGCGCACACGGTGGAGGGAGCAGGCAGCTGCTGCGACGCCGTaGGGACAGACAACGCCGGCGGCAGCGTGGTCACGGGTGGTAGCG | + |
Preference number: 5 (lower is better) Translates to: RPRTRWREQAAAATP*GQTTPAAAWSRVVA Trigger: CGCTACCACCCGTGACCACGCTGCCGCCGGCGTTGTCTGTCCCCACGGCGTCGCAGCAGCTGCCTGCTCCCTCCACCGTGTGCGCGGCCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072915.4 |
||
CDS GCA 90 bp | GCCGCCGCCTCCTGCATCTTGCCGGGATGGGACGTCTGCGGAGGCTaGGACTGCGGCTGTGGCTGCTGCGCGGGCTGCGACGGGAGGTGT | + |
Preference number: 5 (lower is better) Translates to: AAASCILPGWDVCGG*DCGCGCCAGCDGRC Trigger: ACACCTCCCGTCGCAGCCCGCGCAGCAGCCACAGCCGCAGTCGCAGCCTCCGCAGACGTCCCATCCCGGCAAGATGCAGGAGGCGGCGGC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072915.4 |
||
CDS GCA 90 bp | GCCTCCTGCATCTTGCCGGGATGGGACGTCTGCGGAGGCTGCGACTaGGGCTGTGGCTGCTGCGCGGGCTGCGACGGGAGGTGTGGAGGC | + |
Preference number: 5 (lower is better) Translates to: ASCILPGWDVCGGCD*GCGCCAGCDGRCGG Trigger: GCCTCCACACCTCCCGTCGCAGCCCGCGCAGCAGCCACAGCCGCAGTCGCAGCCTCCGCAGACGTCCCATCCCGGCAAGATGCAGGAGGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072915.4 |
||
CDS CCA 90 bp | GCTCCAAGAGAGGGGCTGTGGGTGAGGCGGCGGCCGCGCACACGGTaGAGGGAGCAGGCAGCTGCTGCGACGCCGTGGGGACAGACAACG | + |
Preference number: 5 (lower is better) Translates to: APREGLWVRRRPRTR*REQAAAATPWGQTT Trigger: CGTTGTCTGTCCCCACGGCGTCGCAGCAGCTGCCTGCTCCCTCCACCGTGTGCGCGGCCGCCGCCTCACCCACAGCCCCTCTCTTGGAGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072915.4 |
||
CDS CCA 90 bp | CCGAGTGTAGGGAGCTCCCCTTGCTGTCAGCCCTGCCGGCTGCGGTaGGCTCCAAGAGAGGGGCTGTGGGTGAGGCGGCGGCCGCGCACA | + |
Preference number: 5 (lower is better) Translates to: PSVGSSPCCQPCRLR*APREGLWVRRRPRT Trigger: TGTGCGCGGCCGCCGCCTCACCCACAGCCCCTCTCTTGGAGCCCACCGCAGCCGGCAGGGCTGACAGCAAGGGGAGCTCCCTACACTCGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072915.4 |
||
CDS GCA 90 bp | CTCTATGGCGAACGGATGTTTGAAGCCTGTGGTGGACGCGGCGGCTaGAGCGGCGGCGGCGGCGGCCGAGCCCAGCCCGTAGGGTGGGAA | + |
Preference number: 5 (lower is better) Translates to: LYGERMFEACGGRGG*SGGGGGRAQPVGWE Trigger: TTCCCACCCTACGGGCTGGGCTCGGCCGCCGCCGCCGCCGCTGCAGCCGCCGCGTCCACCACAGGCTTCAAACATCCGTTCGCCATAGAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072915.4 |
||
CDS GCA 90 bp | GCTCTGGTTTGCCGAGTGGCACAGAGCCTTGACTGGCACCCCGAATaGCCCATACTCCGGGCCTACCGGGACCCCAGCTGCGGCGGCAGC | + |
Preference number: 5 (lower is better) Translates to: ALVCRVAQSLDWHPE*PILRAYRDPSCGGS Trigger: GCTGCCGCCGCAGCTGGGGTCCCGGTAGGCCCGGAGTATGGGGCATTCGGGGTGCCAGTCAAGGCTCTGTGCCACTCGGCAAACCAGAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072915.4 |
||
CDS TCA 90 bp | GCGGCAGCAGCGGCAGCCGCGGCTACCGAATCCATCACGCCAACATaGGGCCACACGGAGCCGACAACATTGCTGAGCTGGCCCGGCACG | + |
Preference number: 5 (lower is better) Translates to: AAAAAAAATESITPT*GHTEPTTLLSWPGT Trigger: CGTGCCGGGCCAGCTCAGCAATGTTGTCGGCTCCGTGTGGCCTCATGTTGGCGTGATGGATTCGGTAGCCGCGGCTGCCGCTGCTGCCGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072915.4 |
||
CDS CCA 90 bp | GGCTTGATGGGCACCGGTACAGCTGGCAGGCTCTGGTTTGCCGAGTaGCACAGAGCCTTGACTGGCACCCCGAATGCCCCATACTCCGGG | + |
Preference number: 5 (lower is better) Translates to: GLMGTGTAGRLWFAE*HRALTGTPNAPYSG Trigger: CCCGGAGTATGGGGCATTCGGGGTGCCAGTCAAGGCTCTGTGCCACTCGGCAAACCAGAGCCTGCCAGCTGTACCGGTGCCCATCAAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072915.4 |
||
CDS GCA 72 bp | GCGGCGGCCGCGCACACGGTGGAGGGAGCAGGCAGCTaGTGCGACGCCGTGGGGACAGACAACGCCGGCGGC | + |
Preference number: 6 (lower is better) Translates to: AAAAHTVEGAGS*CDAVGTDNAGG Trigger: GCCGCCGGCGTTGTCTGTCCCCACGGCGTCGCAGCAGCTGCCTGCTCCCTCCACCGTGTGCGCGGCCGCCGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072915.4 |
||
CDS CCA 72 bp | GAGGGGCTGTGGGTGAGGCGGCGGCCGCGCACACGGTaGAGGGAGCAGGCAGCTGCTGCGACGCCGTGGGGA | + |
Preference number: 6 (lower is better) Translates to: EGLWVRRRPRTR*REQAAAATPWG Trigger: TCCCCACGGCGTCGCAGCAGCTGCCTGCTCCCTCCACCGTGTGCGCGGCCGCCGCCTCACCCACAGCCCCTC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072915.4 |
||
CDS CCA 72 bp | GCCGCCACGGCCGCCGCCTCCTGCATCTTGCCGGGATaGGACGTCTGCGGAGGCTGCGACTGCGGCTGTGGC | + |
Preference number: 6 (lower is better) Translates to: AATAAASCILPG*DVCGGCDCGCG Trigger: GCCACAGCCGCAGTCGCAGCCTCCGCAGACGTCCCATCCCGGCAAGATGCAGGAGGCGGCGGCCGTGGCGGC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072915.4 |
||
CDS GCA 72 bp | GCCGCCGCCTCCTGCATCTTGCCGGGATGGGACGTCTaGGGAGGCTGCGACTGCGGCTGTGGCTGCTGCGCG | + |
Preference number: 6 (lower is better) Translates to: AAASCILPGWDV*GGCDCGCGCCA Trigger: CGCGCAGCAGCCACAGCCGCAGTCGCAGCCTCCGCAGACGTCCCATCCCGGCAAGATGCAGGAGGCGGCGGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072915.4 |
||
CDS CCA 72 bp | GGGATGGGACGTCTGCGGAGGCTGCGACTGCGGCTGTaGCTGCTGCGCGGGCTGCGACGGGAGGTGTGGAGG | + |
Preference number: 6 (lower is better) Translates to: GMGRLRRLRLRL*LLRGLRREVWR Trigger: CCTCCACACCTCCCGTCGCAGCCCGCGCAGCAGCCACAGCCGCAGTCGCAGCCTCCGCAGACGTCCCATCCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072915.4 |
||
CDS GCA 72 bp | ATCTTGCCGGGATGGGACGTCTGCGGAGGCTGCGACTaGGGCTGTGGCTGCTGCGCGGGCTGCGACGGGAGG | + |
Preference number: 6 (lower is better) Translates to: ILPGWDVCGGCD*GCGCCAGCDGR Trigger: CCTCCCGTCGCAGCCCGCGCAGCAGCCACAGCCGCAGTCGCAGCCTCCGCAGACGTCCCATCCCGGCAAGAT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072915.4 |
||
CDS CCA 72 bp | ACACGGTGGAGGGAGCAGGCAGCTGCTGCGACGCCGTaGGGACAGACAACGCCGGCGGCAGCGTGGTCACGG | + |
Preference number: 6 (lower is better) Translates to: TRWREQAAAATP*GQTTPAAAWSR Trigger: CCGTGACCACGCTGCCGCCGGCGTTGTCTGTCCCCACGGCGTCGCAGCAGCTGCCTGCTCCCTCCACCGTGT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072915.4 |
||
CDS GCA 72 bp | GCAGGTGACCTCCTGGCCCCGTGCCGGGCGCGCCCTTaGTGCTTCCTGAGTGTAGGTGAGCGTGGTCTGCGC | + |
Preference number: 6 (lower is better) Translates to: AGDLLAPCRARP*CFLSVGERGLR Trigger: GCGCAGACCACGCTCACCTACACTCAGGAAGCAGCAAGGGCGCGCCCGGCACGGGGCCAGGAGGTCACCTGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072915.4 |
||
CDS GCA 72 bp | TCCTGCATCTTGCCGGGATGGGACGTCTGCGGAGGCTaGGACTGCGGCTGTGGCTGCTGCGCGGGCTGCGAC | + |
Preference number: 6 (lower is better) Translates to: SCILPGWDVCGG*DCGCGCCAGCD Trigger: GTCGCAGCCCGCGCAGCAGCCACAGCCGCAGTCGCAGCCTCCGCAGACGTCCCATCCCGGCAAGATGCAGGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072915.4 |
||
CDS CAA 90 bp | AACGCCGGCGGCAGCGTGGTCACGGGTGGTAGCGCAGGCGTGGGCTaGATGGGCACCGGTACAGCTGGCAGGCTCTGGTTTGCCGAGTGG | + |
Preference number: 6 (lower is better) Translates to: NAGGSVVTGGSAGVG*MGTGTAGRLWFAEW Trigger: CCACTCGGCAAACCAGAGCCTGCCAGCTGTACCGGTGCCCATCAAGCCCACGCCTGCGCTACCACCCGTGACCACGCTGCCGCCGGCGTT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072915.4 |
||
CDS GCA 72 bp | TGCCGAGTGGCACAGAGCCTTGACTGGCACCCCGAATaGCCCATACTCCGGGCCTACCGGGACCCCAGCTGC | + |
Preference number: 6 (lower is better) Translates to: CRVAQSLDWHPE*PILRAYRDPSC Trigger: GCAGCTGGGGTCCCGGTAGGCCCGGAGTATGGGGCATTCGGGGTGCCAGTCAAGGCTCTGTGCCACTCGGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072915.4 |
||
CDS GCA 72 bp | GTGTGCGGCGTGGTGGTGATGGTGGTGGTGGTGGTGTaGGTGGTGGGGATGGTGGGGATGCAGGTGACCTCC | + |
Preference number: 6 (lower is better) Translates to: VCGVVVMVVVVV*VVGMVGMQVTS Trigger: GGAGGTCACCTGCATCCCCACCATCCCCACCACGCACACCACCACCACCACCATCACCACCACGCCGCACAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072915.4 |
||
CDS CAA 72 bp | GGCAGCGTGGTCACGGGTGGTAGCGCAGGCGTGGGCTaGATGGGCACCGGTACAGCTGGCAGGCTCTGGTTT | + |
Preference number: 6 (lower is better) Translates to: GSVVTGGSAGVG*MGTGTAGRLWF Trigger: AAACCAGAGCCTGCCAGCTGTACCGGTGCCCATCAAGCCCACGCCTGCGCTACCACCCGTGACCACGCTGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072915.4 |
||
CDS CAA 90 bp | ACCGGTACAGCTGGCAGGCTCTGGTTTGCCGAGTGGCACAGAGCCTaGACTGGCACCCCGAATGCCCCATACTCCGGGCCTACCGGGACC | + |
Preference number: 6 (lower is better) Translates to: TGTAGRLWFAEWHRA*TGTPNAPYSGPTGT Trigger: GGTCCCGGTAGGCCCGGAGTATGGGGCATTCGGGGTGCCAGTCAAGGCTCTGTGCCACTCGGCAAACCAGAGCCTGCCAGCTGTACCGGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072915.4 |
||
CDS TCA 72 bp | GTGCCGGGCGCGCCCTTGCTGCTTCCTGAGTGTAGGTaGGCGTGGTCTGCGCGTAGCACCTTGAAGCGCTTG | + |
Preference number: 6 (lower is better) Translates to: VPGAPLLLPECR*AWSARSTLKRL Trigger: CAAGCGCTTCAAGGTGCTACGCGCAGACCACGCTCACCTACACTCAGGAAGCAGCAAGGGCGCGCCCGGCAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072915.4 |
||
CDS TCA 72 bp | CGCCAACATGAGGCCACACGGAGCCGACAACATTGCTaGGCTGGCCCGGCACGGGGTAGCCCAAGTGGTGCA | + |
Preference number: 6 (lower is better) Translates to: RQHEATRSRQHC*AGPARGSPSGA Trigger: TGCACCACTTGGGCTACCCCGTGCCGGGCCAGCTCAGCAATGTTGTCGGCTCCGTGTGGCCTCATGTTGGCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072915.4 |
||
CDS CCA 72 bp | CAGGCTCTGGTTTGCCGAGTGGCACAGAGCCTTGACTaGCACCCCGAATGCCCCATACTCCGGGCCTACCGG | + |
Preference number: 6 (lower is better) Translates to: QALVCRVAQSLD*HPECPILRAYR Trigger: CCGGTAGGCCCGGAGTATGGGGCATTCGGGGTGCCAGTCAAGGCTCTGTGCCACTCGGCAAACCAGAGCCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072915.4 |
||
CDS CCA 72 bp | GGCACCGGTACAGCTGGCAGGCTCTGGTTTGCCGAGTaGCACAGAGCCTTGACTGGCACCCCGAATGCCCCA | + |
Preference number: 6 (lower is better) Translates to: GTGTAGRLWFAE*HRALTGTPNAP Trigger: TGGGGCATTCGGGGTGCCAGTCAAGGCTCTGTGCCACTCGGCAAACCAGAGCCTGCCAGCTGTACCGGTGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072915.4 |
||
CDS CAA 72 bp | GCTGGCAGGCTCTGGTTTGCCGAGTGGCACAGAGCCTaGACTGGCACCCCGAATGCCCCATACTCCGGGCCT | + |
Preference number: 6 (lower is better) Translates to: AGRLWFAEWHRA*TGTPNAPYSGP Trigger: AGGCCCGGAGTATGGGGCATTCGGGGTGCCAGTCAAGGCTCTGTGCCACTCGGCAAACCAGAGCCTGCCAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072915.4 |
||
CDS TCA 72 bp | GCGGCAGCCGCGGCTACCGAATCCATCACGCCAACATaGGGCCACACGGAGCCGACAACATTGCTGAGCTGG | + |
Preference number: 6 (lower is better) Translates to: AAAAATESITPT*GHTEPTTLLSW Trigger: CCAGCTCAGCAATGTTGTCGGCTCCGTGTGGCCTCATGTTGGCGTGATGGATTCGGTAGCCGCGGCTGCCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072915.4 |
||
CDS CCA 72 bp | GTGGGCTTGATGGGCACCGGTACAGCTGGCAGGCTCTaGTTTGCCGAGTGGCACAGAGCCTTGACTGGCACC | + |
Preference number: 6 (lower is better) Translates to: VGLMGTGTAGRL*FAEWHRALTGT Trigger: GGTGCCAGTCAAGGCTCTGTGCCACTCGGCAAACCAGAGCCTGCCAGCTGTACCGGTGCCCATCAAGCCCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072915.4 |
||
CDS CAA 72 bp | TCCCGCCCGATGATGTTCTCTATGGCGAACGGATGTTaGAAGCCTGTGGTGGACGCGGCGGCTGCAGCGGCG | + |
Preference number: 6 (lower is better) Translates to: SRPMMFSMANGC*KPVVDAAAAAA Trigger: CGCCGCTGCAGCCGCCGCGTCCACCACAGGCTTCAAACATCCGTTCGCCATAGAGAACATCATCGGGCGGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072915.4 |
||
CDS GCA 72 bp | CTTGATGGGCACCGGTACAGCTGGCAGGCTCTGGTTTaGCGAGTGGCACAGAGCCTTGACTGGCACCCCGAA | + |
Preference number: 6 (lower is better) Translates to: LDGHRYSWQALV*RVAQSLDWHPE Trigger: TTCGGGGTGCCAGTCAAGGCTCTGTGCCACTCGGCAAACCAGAGCCTGCCAGCTGTACCGGTGCCCATCAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072915.4 |
||
CDS GCA 72 bp | AAGAATGCACCAACACCGAGTGTAGGGAGCTCCCCTTaGTGTCAGCCCTGCCGGCTGCGGTGGGCTCCAAGA | + |
Preference number: 6 (lower is better) Translates to: KNAPTPSVGSSP*CQPCRLRWAPR Trigger: TCTTGGAGCCCACCGCAGCCGGCAGGGCTGACAGCAAGGGGAGCTCCCTACACTCGGTGTTGGTGCATTCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072915.4 |