Pregenerated sensors for FOXA2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037025Ensembl transcript IDs: ENSMUST00000047315.10, ENSMUST00000109964.8, ENSMUST00000172928.2
Found 124 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGACACAGACAGGTGAGACTGCTCCCTTGAGGCCTGAAGTGTGGTaGCTACTTTTCCTCAAAGCTCTCCCAAAGTCTCCACTCAGCCTC | + |
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Preference number: 1 (lower is better) Translates to: GTQTGETAPLRPEVW*LLFLKALPKSPLSL Trigger: GAGGCTGAGTGGAGACTTTGGGAGAGCTTTGAGGAAAAGTAGCCACCACACTTCAGGCCTCAAGGGAGCAGTCTCACCTGTCTGTGTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| 3UTR-3UTR TCA 90 bp | CACCATGTCCAGAATGGGATGTGTTTTTCTCCTTTCTCCTGGTCCGGTACACCATTCCCTTGTCCCCAGTaGCCAGAGCTAGCAGGGCCT | + |
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Preference number: 2 (lower is better) Translates to: HHVQNGMCFSPFSWSGTPFPCPQ*PELAGP Trigger: AGGCCCTGCTAGCTCTGGTCACTGGGGACAAGGGAA...TGGTGTACCGGACCAGGAGAAAGGAGAAAAACACATCCCATTCTGGACATGGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| 3UTR CAA 90 bp | CTGTGGCCCATCTATTTAGGGACACAGACAGGTGAGACTGCTCCCTaGAGGCCTGAAGTGTGGTGGCTACTTTTCCTCAAAGCTCTCCCA | + |
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Preference number: 2 (lower is better) Translates to: LWPIYLGTQTGETAP*RPEVWWLLFLKALP Trigger: TGGGAGAGCTTTGAGGAAAAGTAGCCACCACACTTCAGGCCTCAAGGGAGCAGTCTCACCTGTCTGTGTCCCTAAATAGATGGGCCACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| 3UTR-3UTR TCA 90 bp | CACCATGTCCAGAATGGGATGTGTTTTTCTCCTTTCTCCTGGTCCGGTACACCATGCTCCCTTGAGGCCTaGAGTGTGGTGGCTACTTTT | + |
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Preference number: 2 (lower is better) Translates to: HHVQNGMCFSPFSWSGTPCSLEA*SVVATF Trigger: AAAAGTAGCCACCACACTTCAGGCCTCAAGGGAGCA...TGGTGTACCGGACCAGGAGAAAGGAGAAAAACACATCCCATTCTGGACATGGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| 3UTR-3UTR TCA 90 bp | ATAAATAAAGCACGCAGAAACCATAAATTAAATCAGACCCGAGACCTGGATTTCTTCCCTTGTCCCCAGTaGCCAGAGCTAGCAGGGCCT | + |
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Preference number: 2 (lower is better) Translates to: INKARRNHKLNQTRDLDFFPCPQ*PELAGP Trigger: AGGCCCTGCTAGCTCTGGTCACTGGGGACAAGGGAA...GAAATCCAGGTCTCGGGTCTGATTTAATTTATGGTTTCTGCGTGCTTTATTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| 3UTR-3UTR TCA 90 bp | CACCATGTCCAGAATGGGATGTGTTTTTCTCCTTTCTCCTGGTCCGGTACACCAACTCTGCAGATGTCTTaGGAAGCAGTAGTCTACATA | + |
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Preference number: 2 (lower is better) Translates to: HHVQNGMCFSPFSWSGTPTLQMS*EAVVYI Trigger: TATGTAGACTACTGCTTCTCAAGACATCTGCAGAGT...TGGTGTACCGGACCAGGAGAAAGGAGAAAAACACATCCCATTCTGGACATGGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| 3UTR-3UTR CCA 90 bp | CACCATGTCCAGAATGGGATGTGTTTTTCTCCTTTCTCCTGGTCCGGTACACCAAATGACAGATCACTGTaGCCCATCTATTTAGGGACA | + |
|
Preference number: 2 (lower is better) Translates to: HHVQNGMCFSPFSWSGTPNDRSL*PIYLGT Trigger: TGTCCCTAAATAGATGGGCCACAGTGATCTGTCATT...TGGTGTACCGGACCAGGAGAAAGGAGAAAAACACATCCCATTCTGGACATGGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| 3UTR-3UTR CCA 90 bp | AAATTAAATCAGACCCGAGACCTGGATTTCACCATGTCCAGAATGGGATGTGTTAGGCCTGAAGTGTGGTaGCTACTTTTCCTCAAAGCT | + |
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Preference number: 2 (lower is better) Translates to: KLNQTRDLDFTMSRMGCVRPEVW*LLFLKA Trigger: AGCTTTGAGGAAAAGTAGCCACCACACTTCAGGCCT...AACACATCCCATTCTGGACATGGTGAAATCCAGGTCTCGGGTCTGATTTAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| 3UTR-3UTR TCA 90 bp | ATAAATAAAGCACGCAGAAACCATAAATTAAATCAGACCCGAGACCTGGATTTCTGCTCCCTTGAGGCCTaGAGTGTGGTGGCTACTTTT | + |
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Preference number: 2 (lower is better) Translates to: INKARRNHKLNQTRDLDFCSLEA*SVVATF Trigger: AAAAGTAGCCACCACACTTCAGGCCTCAAGGGAGCA...GAAATCCAGGTCTCGGGTCTGATTTAATTTATGGTTTCTGCGTGCTTTATTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| 3UTR-3UTR GCA 90 bp | ACCATGTCCAGAATGGGATGTGTTTTTCTCCTTTCTCCTGGTCCGGTACACCAGAAAGTCAGACTTTTCTaGAACAACAGCAATAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: TMSRMGCVFLLSPGPVHQKVRLF*NNSNRE Trigger: TTCTCTATTGCTGTTGTTGCAGAAAAGTCTGACTTT...CTGGTGTACCGGACCAGGAGAAAGGAGAAAAACACATCCCATTCTGGACATGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| 3UTR-3UTR CCA 90 bp | CACCATGTCCAGAATGGGATGTGTTTTTCTCCTTTCTCCTGGTCCGGTACACCAATCAGTACAACCCTCTaGTTTTCTGTTAAAACTACA | + |
|
Preference number: 2 (lower is better) Translates to: HHVQNGMCFSPFSWSGTPISTTL*FSVKTT Trigger: TGTAGTTTTAACAGAAAACCAGAGGGTTGTACTGAT...TGGTGTACCGGACCAGGAGAAAGGAGAAAAACACATCCCATTCTGGACATGGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| 3UTR-3UTR CCA 90 bp | ACCATGTCCAGAATGGGATGTGTTTTTCTCCTTTCTCCTGGTCCGGTACACCAGATCAGTACAACCCTCTaGTTTTCTGTTAAAACTACA | + |
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Preference number: 2 (lower is better) Translates to: TMSRMGCVFLLSPGPVHQISTTL*FSVKTT Trigger: TGTAGTTTTAACAGAAAACCAGAGGGTTGTACTGAT...CTGGTGTACCGGACCAGGAGAAAGGAGAAAAACACATCCCATTCTGGACATGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| 3UTR-3UTR CCA 90 bp | ATAAATAAAGCACGCAGAAACCATAAATTAAATCAGACCCGAGACCTGGATTTCAGGCCTGAAGTGTGGTaGCTACTTTTCCTCAAAGCT | + |
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Preference number: 2 (lower is better) Translates to: INKARRNHKLNQTRDLDFRPEVW*LLFLKA Trigger: AGCTTTGAGGAAAAGTAGCCACCACACTTCAGGCCT...GAAATCCAGGTCTCGGGTCTGATTTAATTTATGGTTTCTGCGTGCTTTATTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| 3UTR-3UTR CCA 90 bp | CAACAACAAAAATCAAACTCTGCAGATGTCTTGAGAAGCAGTAGTCTACATAGAAATGACAGATCACTGTaGCCCATCTATTTAGGGACA | + |
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Preference number: 2 (lower is better) Translates to: QQQKSNSADVLRSSSLHRNDRSL*PIYLGT Trigger: TGTCCCTAAATAGATGGGCCACAGTGATCTGTCATT...TCTATGTAGACTACTGCTTCTCAAGACATCTGCAGAGTTTGATTTTTGTTGTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| 3UTR-3UTR GCA 90 bp | GTGTTTTTCTCCTTTCTCCTGGTCCGGTACACCAGACTCTTACATTATTTTTCTAAAGTCAGACTTTTCTaGAACAACAGCAATAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: VFFSFLLVRYTRLLHYFSKVRLF*NNSNRE Trigger: TTCTCTATTGCTGTTGTTGCAGAAAAGTCTGACTTT...AGAAAAATAATGTAAGAGTCTGGTGTACCGGACCAGGAGAAAGGAGAAAAACAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| 3UTR-3UTR CCA 90 bp | ATAAATAAAGCACGCAGAAACCATAAATTAAATCAGACCCGAGACCTGGATTTCTCTGTTAAAACTACATaGTTTTACACCAAGTCACTC | + |
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Preference number: 2 (lower is better) Translates to: INKARRNHKLNQTRDLDFSVKTT*FYTKSL Trigger: GAGTGACTTGGTGTAAAACCATGTAGTTTTAACAGA...GAAATCCAGGTCTCGGGTCTGATTTAATTTATGGTTTCTGCGTGCTTTATTTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| 3UTR-3UTR CAA 90 bp | ACCATGTCCAGAATGGGATGTGTTTTTCTCCTTTCTCCTGGTCCGGTACACCAGGGTGAGACTGCTCCCTaGAGGCCTGAAGTGTGGTGG | + |
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Preference number: 3 (lower is better) Translates to: TMSRMGCVFLLSPGPVHQGETAP*RPEVWW Trigger: CCACCACACTTCAGGCCTCAAGGGAGCAGTCTCACC...CTGGTGTACCGGACCAGGAGAAAGGAGAAAAACACATCCCATTCTGGACATGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| 3UTR CCA 72 bp | ACAGGTGAGACTGCTCCCTTGAGGCCTGAAGTGTGGTaGCTACTTTTCCTCAAAGCTCTCCCAAAGTCTCCA | + |
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Preference number: 3 (lower is better) Translates to: TGETAPLRPEVW*LLFLKALPKSP Trigger: TGGAGACTTTGGGAGAGCTTTGAGGAAAAGTAGCCACCACACTTCAGGCCTCAAGGGAGCAGTCTCACCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| 3UTR-3UTR CAA 90 bp | CACCATGTCCAGAATGGGATGTGTTTTTCTCCTTTCTCCTGGTCCGGTACACCAAGCCTCTCATTTCCCTaGTCCCCAGTGACCAGAGCT | + |
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Preference number: 3 (lower is better) Translates to: HHVQNGMCFSPFSWSGTPSLSFP*SPVTRA Trigger: AGCTCTGGTCACTGGGGACAAGGGAAATGAGAGGCT...TGGTGTACCGGACCAGGAGAAAGGAGAAAAACACATCCCATTCTGGACATGGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| 3UTR-3UTR CAA 90 bp | GTGTTTTTCTCCTTTCTCCTGGTCCGGTACACCAGACTCTTACATTATTTTTCTAGCCTCTCATTTCCCTaGTCCCCAGTGACCAGAGCT | + |
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Preference number: 3 (lower is better) Translates to: VFFSFLLVRYTRLLHYFSSLSFP*SPVTRA Trigger: AGCTCTGGTCACTGGGGACAAGGGAAATGAGAGGCT...AGAAAAATAATGTAAGAGTCTGGTGTACCGGACCAGGAGAAAGGAGAAAAACAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| 3UTR-3UTR CAA 90 bp | ATAAATAAAGCACGCAGAAACCATAAATTAAATCAGACCCGAGACCTGGATTTCGGTGAGACTGCTCCCTaGAGGCCTGAAGTGTGGTGG | + |
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Preference number: 3 (lower is better) Translates to: INKARRNHKLNQTRDLDFGETAP*RPEVWW Trigger: CCACCACACTTCAGGCCTCAAGGGAGCAGTCTCACC...GAAATCCAGGTCTCGGGTCTGATTTAATTTATGGTTTCTGCGTGCTTTATTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| 3UTR-3UTR CAA 90 bp | AAATTAAATCAGACCCGAGACCTGGATTTCACCATGTCCAGAATGGGATGTGTTAACTCTGCAGATGTCTaGAGAAGCAGTAGTCTACAT | + |
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Preference number: 3 (lower is better) Translates to: KLNQTRDLDFTMSRMGCVNSADV*RSSSLH Trigger: ATGTAGACTACTGCTTCTCAAGACATCTGCAGAGTT...AACACATCCCATTCTGGACATGGTGAAATCCAGGTCTCGGGTCTGATTTAATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| 3UTR CCA 72 bp | CATGTCCAGAATGGGATGTGTTTTTCTCCTTTCTCCTaGTCCGGTACACCAGACTCTTACATTATTTTTCTT | + |
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Preference number: 3 (lower is better) Translates to: HVQNGMCFSPFS*SGTPDSYIIFL Trigger: AAGAAAAATAATGTAAGAGTCTGGTGTACCGGACCAGGAGAAAGGAGAAAAACACATCCCATTCTGGACATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| CDS-3UTR CCA 90 bp | ACCATGTCCAGAATGGGATGTGTTTTTCTCCTTTCTCCTGGTCCGGTACACCAGGGTGGGCCCAGCAGGTaGGCTGCAGCCTGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: TMSRMGCVFLLSPGPVHQGGPSR*AAACCC Trigger: GCAGCAGCAGGCTGCAGCCCACCTGCTGGGCCCACC...CTGGTGTACCGGACCAGGAGAAAGGAGAAAAACACATCCCATTCTGGACATGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| CDS-3UTR CCA 90 bp | CACCATGTCCAGAATGGGATGTGTTTTTCTCCTTTCTCCTGGTCCGGTACACCAGCCTGGGTGGTGAGGTaGGCCCAGCAGGTGGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: HHVQNGMCFSPFSWSGTPAWVVR*AQQVGC Trigger: GCAGCCCACCTGCTGGGCCCACCTCACCACCCAGGC...TGGTGTACCGGACCAGGAGAAAGGAGAAAAACACATCCCATTCTGGACATGGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| CDS-3UTR GCA 90 bp | ACCATGTCCAGAATGGGATGTGTTTTTCTCCTTTCTCCTGGTCCGGTACACCAGCGGCTCAGGCCGGCCTaGCCGTACATGGGGCTCATC | + |
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Preference number: 4 (lower is better) Translates to: TMSRMGCVFLLSPGPVHQRLRPA*PYMGLI Trigger: GATGAGCCCCATGTACGGGCAGGCCGGCCTGAGCCG...CTGGTGTACCGGACCAGGAGAAAGGAGAAAAACACATCCCATTCTGGACATGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| CDS-3UTR CCA 90 bp | CACCATGTCCAGAATGGGATGTGTTTTTCTCCTTTCTCCTGGTCCGGTACACCACTCTGGTGGCAGGCCTaGGTGGTGAGGTGGGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: HHVQNGMCFSPFSWSGTPLWWQA*VVRWAQ Trigger: CTGGGCCCACCTCACCACCCAGGCCTGCCACCAGAG...TGGTGTACCGGACCAGGAGAAAGGAGAAAAACACATCCCATTCTGGACATGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| CDS-3UTR TCA 90 bp | CACCATGTCCAGAATGGGATGTGTTTTTCTCCTTTCTCCTGGTCCGGTACACCAAGACTCGGACTCAGGTaGGGTCCCATGCCCGCCACG | + |
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Preference number: 4 (lower is better) Translates to: HHVQNGMCFSPFSWSGTPRLGLR*GPMPAT Trigger: CGTGGCGGGCATGGGACCTCACCTGAGTCCGAGTCT...TGGTGTACCGGACCAGGAGAAAGGAGAAAAACACATCCCATTCTGGACATGGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| CDS-3UTR TCA 90 bp | ACCATGTCCAGAATGGGATGTGTTTTTCTCCTTTCTCCTGGTCCGGTACACCAGAGACTCGGACTCAGGTaGGGTCCCATGCCCGCCACG | + |
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Preference number: 4 (lower is better) Translates to: TMSRMGCVFLLSPGPVHQRLGLR*GPMPAT Trigger: CGTGGCGGGCATGGGACCTCACCTGAGTCCGAGTCT...CTGGTGTACCGGACCAGGAGAAAGGAGAAAAACACATCCCATTCTGGACATGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| CDS-3UTR GCA 90 bp | ACCATGTCCAGAATGGGATGTGTTTTTCTCCTTTCTCCTGGTCCGGTACACCAGTTGCCCGAGTCTGGGTaGAGGGTCCAGAAGGAGCCC | + |
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Preference number: 4 (lower is better) Translates to: TMSRMGCVFLLSPGPVHQLPESG*RVQKEP Trigger: GGGCTCCTTCTGGACCCTGCACCCAGACTCGGGCAA...CTGGTGTACCGGACCAGGAGAAAGGAGAAAAACACATCCCATTCTGGACATGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| CDS-3UTR TCA 90 bp | ACCATGTCCAGAATGGGATGTGTTTTTCTCCTTTCTCCTGGTCCGGTACACCAGTGGTGGTGGCTGTGGTaGTGTTGCTGCTCGGACGAC | + |
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Preference number: 4 (lower is better) Translates to: TMSRMGCVFLLSPGPVHQWWWLW*CCCSDD Trigger: GTCGTCCGAGCAGCAACATCACCACAGCCACCACCA...CTGGTGTACCGGACCAGGAGAAAGGAGAAAAACACATCCCATTCTGGACATGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| CDS-3UTR GCA 90 bp | GTGTTTTTCTCCTTTCTCCTGGTCCGGTACACCAGACTCTTACATTATTTTTCTTCAGGTGAGGTCCCATaGCCGCCACGCCGGCCGCCC | + |
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Preference number: 4 (lower is better) Translates to: VFFSFLLVRYTRLLHYFSSGEVP*PPRRPP Trigger: GGGCGGCCGGCGTGGCGGGCATGGGACCTCACCTGA...AGAAAAATAATGTAAGAGTCTGGTGTACCGGACCAGGAGAAAGGAGAAAAACAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| CDS-3UTR GCA 90 bp | AAATTAAATCAGACCCGAGACCTGGATTTCACCATGTCCAGAATGGGATGTGTTTGGGCTGCAGCCTGCTaGTGCTGCCCAGGCGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: KLNQTRDLDFTMSRMGCVWAAAC*CCPGEG Trigger: GCCCTCGCCTGGGCAGCAGCAGCAGGCTGCAGCCCA...AACACATCCCATTCTGGACATGGTGAAATCCAGGTCTCGGGTCTGATTTAATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| CDS-3UTR GCA 90 bp | AAATTAAATCAGACCCGAGACCTGGATTTCACCATGTCCAGAATGGGATGTGTTGCCCAGCAGGTGGGCTaGAGCCTGCTGCTGCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: KLNQTRDLDFTMSRMGCVAQQVG*SLLLLP Trigger: GGGCAGCAGCAGCAGGCTGCAGCCCACCTGCTGGGC...AACACATCCCATTCTGGACATGGTGAAATCCAGGTCTCGGGTCTGATTTAATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| CDS-3UTR CCA 90 bp | ACCATGTCCAGAATGGGATGTGTTTTTCTCCTTTCTCCTGGTCCGGTACACCAGCATGGCCAAGCTGCCTaGCATGGGGGAACCATAGCC | + |
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Preference number: 4 (lower is better) Translates to: TMSRMGCVFLLSPGPVHQHGQAA*HGGTIA Trigger: GGCTATGGTTCCCCCATGCCAGGCAGCTTGGCCATG...CTGGTGTACCGGACCAGGAGAAAGGAGAAAAACACATCCCATTCTGGACATGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| CDS-3UTR TCA 90 bp | CACCATGTCCAGAATGGGATGTGTTTTTCTCCTTTCTCCTGGTCCGGTACACCAAGCGCCCACATAGGATaGCATGTTCATGGAGCCCGC | + |
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Preference number: 4 (lower is better) Translates to: HHVQNGMCFSPFSWSGTPSAHIG*HVHGAR Trigger: GCGGGCTCCATGAACATGTCATCCTATGTGGGCGCT...TGGTGTACCGGACCAGGAGAAAGGAGAAAAACACATCCCATTCTGGACATGGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| CDS-3UTR TCA 90 bp | ACCATGTCCAGAATGGGATGTGTTTTTCTCCTTTCTCCTGGTCCGGTACACCAGTCCATTTTGTGGGGCTaGTGGTGGTGGTGGCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: TMSRMGCVFLLSPGPVHQSILWG*WWWWLW Trigger: CCACAGCCACCACCACCATCAGCCCCACAAAATGGA...CTGGTGTACCGGACCAGGAGAAAGGAGAAAAACACATCCCATTCTGGACATGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| CDS-3UTR GCA 90 bp | AAATTAAATCAGACCCGAGACCTGGATTTCACCATGTCCAGAATGGGATGTGTTAGCCCGCGCTCATGTTaGCGGAACCGCCGCCCATGG | + |
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Preference number: 4 (lower is better) Translates to: KLNQTRDLDFTMSRMGCVSPRSC*RNRRPW Trigger: CCATGGGCGGCGGTTCCGGCAACATGAGCGCGGGCT...AACACATCCCATTCTGGACATGGTGAAATCCAGGTCTCGGGTCTGATTTAATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| CDS-3UTR GCA 90 bp | GTGTTTTTCTCCTTTCTCCTGGTCCGGTACACCAGACTCTTACATTATTTTTCTGCCCAGCAGGTGGGCTaGAGCCTGCTGCTGCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: VFFSFLLVRYTRLLHYFSAQQVG*SLLLLP Trigger: GGGCAGCAGCAGCAGGCTGCAGCCCACCTGCTGGGC...AGAAAAATAATGTAAGAGTCTGGTGTACCGGACCAGGAGAAAGGAGAAAAACAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| CDS-3UTR CCA 90 bp | ACCATGTCCAGAATGGGATGTGTTTTTCTCCTTTCTCCTGGTCCGGTACACCAGCATGTTGCCCGAGTCTaGGTGCAGGGTCCAGAAGGA | + |
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Preference number: 4 (lower is better) Translates to: TMSRMGCVFLLSPGPVHQHVARV*VQGPEG Trigger: TCCTTCTGGACCCTGCACCCAGACTCGGGCAACATG...CTGGTGTACCGGACCAGGAGAAAGGAGAAAAACACATCCCATTCTGGACATGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| CDS-3UTR CCA 90 bp | GTGTTTTTCTCCTTTCTCCTGGTCCGGTACACCAGACTCTTACATTATTTTTCTGGTGGGCCCAGCAGGTaGGCTGCAGCCTGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: VFFSFLLVRYTRLLHYFSGGPSR*AAACCC Trigger: GCAGCAGCAGGCTGCAGCCCACCTGCTGGGCCCACC...AGAAAAATAATGTAAGAGTCTGGTGTACCGGACCAGGAGAAAGGAGAAAAACAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| CDS-3UTR GCA 90 bp | CAACAACAAAAATCAAACTCTGCAGATGTCTTGAGAAGCAGTAGTCTACATAGATCAGGTGAGGTCCCATaGCCGCCACGCCGGCCGCCC | + |
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Preference number: 4 (lower is better) Translates to: QQQKSNSADVLRSSSLHRSGEVP*PPRRPP Trigger: GGGCGGCCGGCGTGGCGGGCATGGGACCTCACCTGA...TCTATGTAGACTACTGCTTCTCAAGACATCTGCAGAGTTTGATTTTTGTTGTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| CDS-3UTR GCA 90 bp | GTGTTTTTCTCCTTTCTCCTGGTCCGGTACACCAGACTCTTACATTATTTTTCTCGGCTCAGGCCGGCCTaGCCGTACATGGGGCTCATC | + |
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Preference number: 4 (lower is better) Translates to: VFFSFLLVRYTRLLHYFSRLRPA*PYMGLI Trigger: GATGAGCCCCATGTACGGGCAGGCCGGCCTGAGCCG...AGAAAAATAATGTAAGAGTCTGGTGTACCGGACCAGGAGAAAGGAGAAAAACAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| CDS-3UTR CCA 90 bp | ACCATGTCCAGAATGGGATGTGTTTTTCTCCTTTCTCCTGGTCCGGTACACCAGTCATCGAGTTCATGTTaGCGTAGGGGGCAAGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TMSRMGCVFLLSPGPVHQSSSSC*RRGQGH Trigger: GTGGCCTTGCCCCCTACGCCAACATGAACTCGATGA...CTGGTGTACCGGACCAGGAGAAAGGAGAAAAACACATCCCATTCTGGACATGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
||
| CDS-3UTR CCA 90 bp | GTGTTTTTCTCCTTTCTCCTGGTCCGGTACACCAGACTCTTACATTATTTTTCTCTCTGGTGGCAGGCCTaGGTGGTGAGGTGGGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VFFSFLLVRYTRLLHYFSLWWQA*VVRWAQ Trigger: CTGGGCCCACCTCACCACCCAGGCCTGCCACCAGAG...AGAAAAATAATGTAAGAGTCTGGTGTACCGGACCAGGAGAAAGGAGAAAAACAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
||
| CDS-3UTR CCA 90 bp | AAATTAAATCAGACCCGAGACCTGGATTTCACCATGTCCAGAATGGGATGTGTTCTTCAGGTGGGCCTCTaGTGGCAGGCCTGGGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KLNQTRDLDFTMSRMGCVLQVGL*WQAWVV Trigger: CACCACCCAGGCCTGCCACCAGAGGCCCACCTGAAG...AACACATCCCATTCTGGACATGGTGAAATCCAGGTCTCGGGTCTGATTTAATTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
||
| CDS-3UTR CCA 90 bp | AAATTAAATCAGACCCGAGACCTGGATTTCACCATGTCCAGAATGGGATGTGTTTGCTCGGGCTTCAGGTaGGCCTCTGGTGGCAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KLNQTRDLDFTMSRMGCVCSGFR*ASGGRP Trigger: AGGCCTGCCACCAGAGGCCCACCTGAAGCCCGAGCA...AACACATCCCATTCTGGACATGGTGAAATCCAGGTCTCGGGTCTGATTTAATTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| CDS-3UTR CCA 90 bp | CACCATGTCCAGAATGGGATGTGTTTTTCTCCTTTCTCCTGGTCCGGTACACCAGGAACCATAGCCCCCTaGGTAGTGCATGACCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: HHVQNGMCFSPFSWSGTPGTIAP*VVHDLF Trigger: GAACAGGTCATGCACTACCCAGGGGGCTATGGTTCC...TGGTGTACCGGACCAGGAGAAAGGAGAAAAACACATCCCATTCTGGACATGGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
||
| CDS-3UTR GCA 90 bp | ACCATGTCCAGAATGGGATGTGTTTTTCTCCTTTCTCCTGGTCCGGTACACCAGTGGCAGCCGCGGACATaGTCATGTATGTGTTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: TMSRMGCVFLLSPGPVHQWQPRT*SCMCSC Trigger: GCATGAACACATACATGAGCATGTCCGCGGCTGCCA...CTGGTGTACCGGACCAGGAGAAAGGAGAAAAACACATCCCATTCTGGACATGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
||
| CDS-3UTR GCA 90 bp | ATAAATAAAGCACGCAGAAACCATAAATTAAATCAGACCCGAGACCTGGATTTCTGGGCTGCAGCCTGCTaGTGCTGCCCAGGCGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: INKARRNHKLNQTRDLDFWAAAC*CCPGEG Trigger: GCCCTCGCCTGGGCAGCAGCAGCAGGCTGCAGCCCA...GAAATCCAGGTCTCGGGTCTGATTTAATTTATGGTTTCTGCGTGCTTTATTTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
||
| CDS-3UTR CCA 90 bp | ACCATGTCCAGAATGGGATGTGTTTTTCTCCTTTCTCCTGGTCCGGTACACCAGAGGATGACATGTTCATaGAGCCCGCGCTCATGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: TMSRMGCVFLLSPGPVHQRMTCS*SPRSCC Trigger: GCAACATGAGCGCGGGCTCCATGAACATGTCATCCT...CTGGTGTACCGGACCAGGAGAAAGGAGAAAAACACATCCCATTCTGGACATGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
||
| CDS-3UTR GCA 90 bp | ATAAATAAAGCACGCAGAAACCATAAATTAAATCAGACCCGAGACCTGGATTTCAGCCCGCGCTCATGTTaGCGGAACCGCCGCCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: INKARRNHKLNQTRDLDFSPRSC*RNRRPW Trigger: CCATGGGCGGCGGTTCCGGCAACATGAGCGCGGGCT...GAAATCCAGGTCTCGGGTCTGATTTAATTTATGGTTTCTGCGTGCTTTATTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
||
| CDS-3UTR GCA 90 bp | GTGTTTTTCTCCTTTCTCCTGGTCCGGTACACCAGACTCTTACATTATTTTTCTTTGCCCGAGTCTGGGTaGAGGGTCCAGAAGGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: VFFSFLLVRYTRLLHYFSLPESG*RVQKEP Trigger: GGGCTCCTTCTGGACCCTGCACCCAGACTCGGGCAA...AGAAAAATAATGTAAGAGTCTGGTGTACCGGACCAGGAGAAAGGAGAAAAACAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
||
| CDS-3UTR GCA 90 bp | ACCATGTCCAGAATGGGATGTGTTTTTCTCCTTTCTCCTGGTCCGGTACACCAGTCCTTCAGTGCCAGTTaGTTCTCACACTTGAAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: TMSRMGCVFLLSPGPVHQSFSAS*FSHLKR Trigger: GCGCTTCAAGTGTGAGAAGCAACTGGCACTGAAGGA...CTGGTGTACCGGACCAGGAGAAAGGAGAAAAACACATCCCATTCTGGACATGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
||
| CDS-3UTR GCA 90 bp | CACCATGTCCAGAATGGGATGTGTTTTTCTCCTTTCTCCTGGTCCGGTACACCATCCTTCAGTGCCAGTTaGTTCTCACACTTGAAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: HHVQNGMCFSPFSWSGTPSFSAS*FSHLKR Trigger: GCGCTTCAAGTGTGAGAAGCAACTGGCACTGAAGGA...TGGTGTACCGGACCAGGAGAAAGGAGAAAAACACATCCCATTCTGGACATGGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
||
| CDS-3UTR GCA 90 bp | GTGTTTTTCTCCTTTCTCCTGGTCCGGTACACCAGACTCTTACATTATTTTTCTGGCCCATGGCCAAGCTaGCTGGCATGGGGGAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: VFFSFLLVRYTRLLHYFSGPWPS*LAWGNH Trigger: ATGGTTCCCCCATGCCAGGCAGCTTGGCCATGGGCC...AGAAAAATAATGTAAGAGTCTGGTGTACCGGACCAGGAGAAAGGAGAAAAACAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
||
| CDS-3UTR TCA 90 bp | AAATTAAATCAGACCCGAGACCTGGATTTCACCATGTCCAGAATGGGATGTGTTAGCGCCCACATAGGATaGCATGTTCATGGAGCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: KLNQTRDLDFTMSRMGCVSAHIG*HVHGAR Trigger: GCGGGCTCCATGAACATGTCATCCTATGTGGGCGCT...AACACATCCCATTCTGGACATGGTGAAATCCAGGTCTCGGGTCTGATTTAATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
||
| CDS-3UTR TCA 90 bp | GTGTTTTTCTCCTTTCTCCTGGTCCGGTACACCAGACTCTTACATTATTTTTCTTGGTGGTGGCTGTGGTaGTGTTGCTGCTCGGACGAC | + |
|
Preference number: 4 (lower is better) Translates to: VFFSFLLVRYTRLLHYFSWWWLW*CCCSDD Trigger: GTCGTCCGAGCAGCAACATCACCACAGCCACCACCA...AGAAAAATAATGTAAGAGTCTGGTGTACCGGACCAGGAGAAAGGAGAAAAACAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| CDS-3UTR TCA 90 bp | ATAAATAAAGCACGCAGAAACCATAAATTAAATCAGACCCGAGACCTGGATTTCGGCCCGCTTTGTTCGTaGCTGGGCCCATGGCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: INKARRNHKLNQTRDLDFGPLCS*LGPWPS Trigger: GCTTGGCCATGGGCCCAGTCACGAACAAAGCGGGCC...GAAATCCAGGTCTCGGGTCTGATTTAATTTATGGTTTCTGCGTGCTTTATTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
||
| CDS-3UTR TCA 90 bp | CAACAACAAAAATCAAACTCTGCAGATGTCTTGAGAAGCAGTAGTCTACATAGAGGCCCGCTTTGTTCGTaGCTGGGCCCATGGCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: QQQKSNSADVLRSSSLHRGPLCS*LGPWPS Trigger: GCTTGGCCATGGGCCCAGTCACGAACAAAGCGGGCC...TCTATGTAGACTACTGCTTCTCAAGACATCTGCAGAGTTTGATTTTTGTTGTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
||
| CDS-3UTR GCA 90 bp | AAATTAAATCAGACCCGAGACCTGGATTTCACCATGTCCAGAATGGGATGTGTTGTAGTAGGAAGTGTCTaGAGCCAGGGGCGAGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: KLNQTRDLDFTMSRMGCVVVGSV*SQGRGI Trigger: GATGCCTCGCCCCTGGCTGCAGACACTTCCTACTAC...AACACATCCCATTCTGGACATGGTGAAATCCAGGTCTCGGGTCTGATTTAATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| CDS-3UTR CCA 90 bp | AAATTAAATCAGACCCGAGACCTGGATTTCACCATGTCCAGAATGGGATGTGTTCATGTTGCCCGAGTCTaGGTGCAGGGTCCAGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KLNQTRDLDFTMSRMGCVHVARV*VQGPEG Trigger: TCCTTCTGGACCCTGCACCCAGACTCGGGCAACATG...AACACATCCCATTCTGGACATGGTGAAATCCAGGTCTCGGGTCTGATTTAATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
||
| CDS-3UTR CCA 90 bp | ATAAATAAAGCACGCAGAAACCATAAATTAAATCAGACCCGAGACCTGGATTTCCTTCAGGTGGGCCTCTaGTGGCAGGCCTGGGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: INKARRNHKLNQTRDLDFLQVGL*WQAWVV Trigger: CACCACCCAGGCCTGCCACCAGAGGCCCACCTGAAG...GAAATCCAGGTCTCGGGTCTGATTTAATTTATGGTTTCTGCGTGCTTTATTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
||
| CDS-3UTR CCA 90 bp | CAACAACAAAAATCAAACTCTGCAGATGTCTTGAGAAGCAGTAGTCTACATAGATGCTCGGGCTTCAGGTaGGCCTCTGGTGGCAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QQQKSNSADVLRSSSLHRCSGFR*ASGGRP Trigger: AGGCCTGCCACCAGAGGCCCACCTGAAGCCCGAGCA...TCTATGTAGACTACTGCTTCTCAAGACATCTGCAGAGTTTGATTTTTGTTGTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| 3UTR CAA 72 bp | ATCTATTTAGGGACACAGACAGGTGAGACTGCTCCCTaGAGGCCTGAAGTGTGGTGGCTACTTTTCCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: IYLGTQTGETAP*RPEVWWLLFLK Trigger: TTTGAGGAAAAGTAGCCACCACACTTCAGGCCTCAAGGGAGCAGTCTCACCTGTCTGTGTCCCTAAATAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
||
| CDS-3UTR TCA 90 bp | GTGTTTTTCTCCTTTCTCCTGGTCCGGTACACCAGACTCTTACATTATTTTTCTTCCATTTTGTGGGGCTaGTGGTGGTGGTGGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VFFSFLLVRYTRLLHYFSSILWG*WWWWLW Trigger: CCACAGCCACCACCACCATCAGCCCCACAAAATGGA...AGAAAAATAATGTAAGAGTCTGGTGTACCGGACCAGGAGAAAGGAGAAAAACAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| CDS-3UTR GCA 90 bp | GTGTTTTTCTCCTTTCTCCTGGTCCGGTACACCAGACTCTTACATTATTTTTCTGGCCGGCGTTCATGTTaGTCACGGAAGAGTAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: VFFSFLLVRYTRLLHYFSGRRSC*SRKSSP Trigger: AGGGCTACTCTTCCGTGAGCAACATGAACGCCGGCC...AGAAAAATAATGTAAGAGTCTGGTGTACCGGACCAGGAGAAAGGAGAAAAACAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
||
| CDS-3UTR GCA 90 bp | CAACAACAAAAATCAAACTCTGCAGATGTCTTGAGAAGCAGTAGTCTACATAGAGGCCCATGGCCAAGCTaGCTGGCATGGGGGAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: QQQKSNSADVLRSSSLHRGPWPS*LAWGNH Trigger: ATGGTTCCCCCATGCCAGGCAGCTTGGCCATGGGCC...TCTATGTAGACTACTGCTTCTCAAGACATCTGCAGAGTTTGATTTTTGTTGTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| CDS-3UTR CCA 90 bp | GTGTTTTTCTCCTTTCTCCTGGTCCGGTACACCAGACTCTTACATTATTTTTCTGCTGCTCCAGTCGGATaGCTCGTGCCCTTCCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: VFFSFLLVRYTRLLHYFSAAPVG*LVPFHL Trigger: AAGATGGAAGGGCACGAGCCATCCGACTGGAGCAGC...AGAAAAATAATGTAAGAGTCTGGTGTACCGGACCAGGAGAAAGGAGAAAAACAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
||
| CDS-3UTR CCA 90 bp | GTGTTTTTCTCCTTTCTCCTGGTCCGGTACACCAGACTCTTACATTATTTTTCTCGGCCTGCCCGTACATaGGGCTCATCGAGTTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: VFFSFLLVRYTRLLHYFSRPART*GSSSSC Trigger: ACATGAACTCGATGAGCCCCATGTACGGGCAGGCCG...AGAAAAATAATGTAAGAGTCTGGTGTACCGGACCAGGAGAAAGGAGAAAAACAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
||
| CDS-3UTR CCA 90 bp | ATAAATAAAGCACGCAGAAACCATAAATTAAATCAGACCCGAGACCTGGATTTCCCAAGCTGCCTGGCATaGGGGAACCATAGCCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: INKARRNHKLNQTRDLDFPSCLA*GNHSPL Trigger: CAGGGGGCTATGGTTCCCCCATGCCAGGCAGCTTGG...GAAATCCAGGTCTCGGGTCTGATTTAATTTATGGTTTCTGCGTGCTTTATTTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
||
| CDS-3UTR TCA 90 bp | CAACAACAAAAATCAAACTCTGCAGATGTCTTGAGAAGCAGTAGTCTACATAGACCTCGCTTGTGCTCCTaGCACGGAGAAGCGCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QQQKSNSADVLRSSSLHRPRLCS*HGEALE Trigger: TTCCAGCGCTTCTCCGTGTCAGGAGCACAAGCGAGG...TCTATGTAGACTACTGCTTCTCAAGACATCTGCAGAGTTTGATTTTTGTTGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
||
| CDS-3UTR GCA 90 bp | AAATTAAATCAGACCCGAGACCTGGATTTCACCATGTCCAGAATGGGATGTGTTCGCGGCTTCCTTCAGTaGCAGTTGCTTCTCACACTT | + |
|
Preference number: 4 (lower is better) Translates to: KLNQTRDLDFTMSRMGCVRGFLQ*QLLLTL Trigger: AAGTGTGAGAAGCAACTGGCACTGAAGGAAGCCGCG...AACACATCCCATTCTGGACATGGTGAAATCCAGGTCTCGGGTCTGATTTAATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
||
| CDS-3UTR CCA 90 bp | CAACAACAAAAATCAAACTCTGCAGATGTCTTGAGAAGCAGTAGTCTACATAGACATGGCCAAGCTGCCTaGCATGGGGGAACCATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: QQQKSNSADVLRSSSLHRHGQAA*HGGTIA Trigger: GGCTATGGTTCCCCCATGCCAGGCAGCTTGGCCATG...TCTATGTAGACTACTGCTTCTCAAGACATCTGCAGAGTTTGATTTTTGTTGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
||
| CDS-3UTR GCA 90 bp | ATAAATAAAGCACGCAGAAACCATAAATTAAATCAGACCCGAGACCTGGATTTCCAGTCGGATGGCTCGTaGCCTTCCATCTTCACGGCT | + |
|
Preference number: 4 (lower is better) Translates to: INKARRNHKLNQTRDLDFQSDGS*PSIFTA Trigger: AGCCGTGAAGATGGAAGGGCACGAGCCATCCGACTG...GAAATCCAGGTCTCGGGTCTGATTTAATTTATGGTTTCTGCGTGCTTTATTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
||
| CDS-3UTR GCA 90 bp | CAACAACAAAAATCAAACTCTGCAGATGTCTTGAGAAGCAGTAGTCTACATAGACAGTCGGATGGCTCGTaGCCTTCCATCTTCACGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QQQKSNSADVLRSSSLHRQSDGS*PSIFTA Trigger: AGCCGTGAAGATGGAAGGGCACGAGCCATCCGACTG...TCTATGTAGACTACTGCTTCTCAAGACATCTGCAGAGTTTGATTTTTGTTGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
||
| CDS-3UTR GCA 90 bp | ATAAATAAAGCACGCAGAAACCATAAATTAAATCAGACCCGAGACCTGGATTTCGGCCGGCGTTCATGTTaGTCACGGAAGAGTAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: INKARRNHKLNQTRDLDFGRRSC*SRKSSP Trigger: AGGGCTACTCTTCCGTGAGCAACATGAACGCCGGCC...GAAATCCAGGTCTCGGGTCTGATTTAATTTATGGTTTCTGCGTGCTTTATTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
||
| CDS-3UTR GCA 90 bp | CAACAACAAAAATCAAACTCTGCAGATGTCTTGAGAAGCAGTAGTCTACATAGAGTAGTAGGAAGTGTCTaGAGCCAGGGGCGAGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: QQQKSNSADVLRSSSLHRVVGSV*SQGRGI Trigger: GATGCCTCGCCCCTGGCTGCAGACACTTCCTACTAC...TCTATGTAGACTACTGCTTCTCAAGACATCTGCAGAGTTTGATTTTTGTTGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
||
| CDS-3UTR CCA 90 bp | ATAAATAAAGCACGCAGAAACCATAAATTAAATCAGACCCGAGACCTGGATTTCGCTGCTCCAGTCGGATaGCTCGTGCCCTTCCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: INKARRNHKLNQTRDLDFAAPVG*LVPFHL Trigger: AAGATGGAAGGGCACGAGCCATCCGACTGGAGCAGC...GAAATCCAGGTCTCGGGTCTGATTTAATTTATGGTTTCTGCGTGCTTTATTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
||
| CDS-3UTR CCA 90 bp | GTGTTTTTCTCCTTTCTCCTGGTCCGGTACACCAGACTCTTACATTATTTTTCTAGGATGACATGTTCATaGAGCCCGCGCTCATGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VFFSFLLVRYTRLLHYFSRMTCS*SPRSCC Trigger: GCAACATGAGCGCGGGCTCCATGAACATGTCATCCT...AGAAAAATAATGTAAGAGTCTGGTGTACCGGACCAGGAGAAAGGAGAAAAACAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
||
| CDS-3UTR CCA 90 bp | ATAAATAAAGCACGCAGAAACCATAAATTAAATCAGACCCGAGACCTGGATTTCCGGCCTGCCCGTACATaGGGCTCATCGAGTTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: INKARRNHKLNQTRDLDFRPART*GSSSSC Trigger: ACATGAACTCGATGAGCCCCATGTACGGGCAGGCCG...GAAATCCAGGTCTCGGGTCTGATTTAATTTATGGTTTCTGCGTGCTTTATTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
||
| CDS-3UTR CCA 90 bp | ATAAATAAAGCACGCAGAAACCATAAATTAAATCAGACCCGAGACCTGGATTTCACGAGTAGGGAGGTTTaGCGTGTGTGTAGCTGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: INKARRNHKLNQTRDLDFTSREV*RVCSCV Trigger: GACGCAGCTACACACACGCCAAACCTCCCTACTCGT...GAAATCCAGGTCTCGGGTCTGATTTAATTTATGGTTTCTGCGTGCTTTATTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
||
| CDS-3UTR CCA 90 bp | CAACAACAAAAATCAAACTCTGCAGATGTCTTGAGAAGCAGTAGTCTACATAGAACGAGTAGGGAGGTTTaGCGTGTGTGTAGCTGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: QQQKSNSADVLRSSSLHRTSREV*RVCSCV Trigger: GACGCAGCTACACACACGCCAAACCTCCCTACTCGT...TCTATGTAGACTACTGCTTCTCAAGACATCTGCAGAGTTTGATTTTTGTTGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
||
| CDS-3UTR CCA 90 bp | CAACAACAAAAATCAAACTCTGCAGATGTCTTGAGAAGCAGTAGTCTACATAGAGGAACCATAGCCCCCTaGGTAGTGCATGACCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: QQQKSNSADVLRSSSLHRGTIAP*VVHDLF Trigger: GAACAGGTCATGCACTACCCAGGGGGCTATGGTTCC...TCTATGTAGACTACTGCTTCTCAAGACATCTGCAGAGTTTGATTTTTGTTGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
||
| CDS-3UTR GCA 90 bp | CAACAACAAAAATCAAACTCTGCAGATGTCTTGAGAAGCAGTAGTCTACATAGATGGCAGCCGCGGACATaGTCATGTATGTGTTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: QQQKSNSADVLRSSSLHRWQPRT*SCMCSC Trigger: GCATGAACACATACATGAGCATGTCCGCGGCTGCCA...TCTATGTAGACTACTGCTTCTCAAGACATCTGCAGAGTTTGATTTTTGTTGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
||
| CDS-3UTR GCA 90 bp | ATAAATAAAGCACGCAGAAACCATAAATTAAATCAGACCCGAGACCTGGATTTCCGCGGCTTCCTTCAGTaGCAGTTGCTTCTCACACTT | + |
|
Preference number: 4 (lower is better) Translates to: INKARRNHKLNQTRDLDFRGFLQ*QLLLTL Trigger: AAGTGTGAGAAGCAACTGGCACTGAAGGAAGCCGCG...GAAATCCAGGTCTCGGGTCTGATTTAATTTATGGTTTCTGCGTGCTTTATTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
||
| CDS-3UTR GCA 90 bp | CAACAACAAAAATCAAACTCTGCAGATGTCTTGAGAAGCAGTAGTCTACATAGATCATGTATGTGTTCATaGCATTCATCCCCAGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: QQQKSNSADVLRSSSLHRSCMCS*HSSPGR Trigger: CCGGCCTGGGGATGAATGGCATGAACACATACATGA...TCTATGTAGACTACTGCTTCTCAAGACATCTGCAGAGTTTGATTTTTGTTGTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| CDS CCA 90 bp | TGCCCGCCACGCCGGCCGCCCCGGCTGAGCCGCTCATGCCCGCCATaGCGCCGGCGCCCGGGGACATGCCAGCTAGCGACGGGCTCATTC | + |
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Preference number: 5 (lower is better) Translates to: CPPRRPPRLSRSCPP*RRRPGTCQLATGSF Trigger: GAATGAGCCCGTCGCTAGCTGGCATGTCCCCGGGCGCCGGCGCCATGGCGGGCATGAGCGGCTCAGCCGGGGCGGCCGGCGTGGCGGGCA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| CDS GCA 90 bp | CGGCTGAGCCGCTCATGCCCGCCATGGCGCCGGCGCCCGGGGACATaGCAGCTAGCGACGGGCTCATTCCAGCGCCCACATAGGATGACA | + |
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Preference number: 5 (lower is better) Translates to: RLSRSCPPWRRRPGT*QLATGSFQRPHRMT Trigger: TGTCATCCTATGTGGGCGCTGGAATGAGCCCGTCGCTAGCTGGCATGTCCCCGGGCGCCGGCGCCATGGCGGGCATGAGCGGCTCAGCCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| CDS GCA 90 bp | CCCCGAGCTGAGCCTGAGAGGCCTGGGACCCAGGAGCGGTCTTCTTaGCTCCGCTACTGGCCGCACCCGCGGCTTCCTTCAGTGCCAGTT | + |
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Preference number: 5 (lower is better) Translates to: PRAEPERPGTQERSS*LRYWPHPRLPSVPV Trigger: AACTGGCACTGAAGGAAGCCGCGGGTGCGGCCAGTAGCGGAGGCAAGAAGACCGCTCCTGGGTCCCAGGCCTCTCAGGCTCAGCTCGGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 ENSMUST00000172928.2 |
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| CDS CCA 90 bp | GTCTGCAGCCAGGGGCGAGGCATCCAGGCCCGCTTTGTTCGTGACTaGGCCCATGGCCAAGCTGCCTGGCATGGGGGAACCATAGCCCCC | + |
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Preference number: 5 (lower is better) Translates to: VCSQGRGIQARFVRD*AHGQAAWHGGTIAP Trigger: GGGGGCTATGGTTCCCCCATGCCAGGCAGCTTGGCCATGGGCCCAGTCACGAACAAAGCGGGCCTGGATGCCTCGCCCCTGGCTGCAGAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 ENSMUST00000172928.2 |
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| CDS CCA 90 bp | ATGTCTTGGGGTCCCGAGCGCGGCTCAGGCCGGCCTGCCCGTACATaGGGCTCATCGAGTTCATGTTGGCGTAGGGGGCAAGGCCACCCA | + |
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Preference number: 5 (lower is better) Translates to: MSWGPERGSGRPART*GSSSSCWRRGQGHP Trigger: TGGGTGGCCTTGCCCCCTACGCCAACATGAACTCGATGAGCCCCATGTACGGGCAGGCCGGCCTGAGCCGCGCTCGGGACCCCAAGACAT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| CDS CCA 90 bp | ACGAGTAGGGAGGTTTGGCGTGTGTGTAGCTGCGTCGGTATGTCTTaGGGTCCCGAGCGCGGCTCAGGCCGGCCTGCCCGTACATGGGGC | + |
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Preference number: 5 (lower is better) Translates to: TSREVWRVCSCVGMS*GPERGSGRPARTWG Trigger: GCCCCATGTACGGGCAGGCCGGCCTGAGCCGCGCTCGGGACCCCAAGACATACCGACGCAGCTACACACACGCCAAACCTCCCTACTCGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| CDS TCA 90 bp | AAGTGTCTGCAGCCAGGGGCGAGGCATCCAGGCCCGCTTTGTTCGTaGCTGGGCCCATGGCCAAGCTGCCTGGCATGGGGGAACCATAGC | + |
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Preference number: 5 (lower is better) Translates to: KCLQPGARHPGPLCS*LGPWPSCLAWGNHS Trigger: GCTATGGTTCCCCCATGCCAGGCAGCTTGGCCATGGGCCCAGTCACGAACAAAGCGGGCCTGGATGCCTCGCCCCTGGCTGCAGACACTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 ENSMUST00000172928.2 |
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| CDS CCA 90 bp | CTAGCGACGGGCTCATTCCAGCGCCCACATAGGATGACATGTTCATaGAGCCCGCGCTCATGTTGCCGGAACCGCCGCCCATGGCAGCCG | + |
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Preference number: 5 (lower is better) Translates to: LATGSFQRPHRMTCS*SPRSCCRNRRPWQP Trigger: CGGCTGCCATGGGCGGCGGTTCCGGCAACATGAGCGCGGGCTCCATGAACATGTCATCCTATGTGGGCGCTGGAATGAGCCCGTCGCTAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| CDS GCA 90 bp | CCGCGCTCATGTTGCCGGAACCGCCGCCCATGGCAGCCGCGGACATaGTCATGTATGTGTTCATGCCATTCATCCCCAGGCCGGCGTTCA | + |
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Preference number: 5 (lower is better) Translates to: PRSCCRNRRPWQPRT*SCMCSCHSSPGRRS Trigger: TGAACGCCGGCCTGGGGATGAATGGCATGAACACATACATGAGCATGTCCGCGGCTGCCATGGGCGGCGGTTCCGGCAACATGAGCGCGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| CDS GCA 90 bp | CAGCGCCCACATAGGATGACATGTTCATGGAGCCCGCGCTCATGTTaGCGGAACCGCCGCCCATGGCAGCCGCGGACATGCTCATGTATG | + |
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Preference number: 5 (lower is better) Translates to: QRPHRMTCSWSPRSC*RNRRPWQPRTCSCM Trigger: CATACATGAGCATGTCCGCGGCTGCCATGGGCGGCGGTTCCGGCAACATGAGCGCGGGCTCCATGAACATGTCATCCTATGTGGGCGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| CDS CCA 90 bp | ATCCAGGCCCGCTTTGTTCGTGACTGGGCCCATGGCCAAGCTGCCTaGCATGGGGGAACCATAGCCCCCTGGGTAGTGCATGACCTGTTC | + |
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Preference number: 5 (lower is better) Translates to: IQARFVRDWAHGQAA*HGGTIAPWVVHDLF Trigger: GAACAGGTCATGCACTACCCAGGGGGCTATGGTTCCCCCATGCCAGGCAGCTTGGCCATGGGCCCAGTCACGAACAAAGCGGGCCTGGAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 ENSMUST00000172928.2 |
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| CDS CCA 90 bp | ACATGTTCATGGAGCCCGCGCTCATGTTGCCGGAACCGCCGCCCATaGCAGCCGCGGACATGCTCATGTATGTGTTCATGCCATTCATCC | + |
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Preference number: 5 (lower is better) Translates to: TCSWSPRSCCRNRRP*QPRTCSCMCSCHSS Trigger: GGATGAATGGCATGAACACATACATGAGCATGTCCGCGGCTGCCATGGGCGGCGGTTCCGGCAACATGAGCGCGGGCTCCATGAACATGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| CDS GCA 90 bp | GTTCATAATAGGCCTGGAGTACACTCCTTGGTAGTAGGAAGTGTCTaGAGCCAGGGGCGAGGCATCCAGGCCCGCTTTGTTCGTGACTGG | + |
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Preference number: 5 (lower is better) Translates to: VHNRPGVHSLVVGSV*SQGRGIQARFVRDW Trigger: CCAGTCACGAACAAAGCGGGCCTGGATGCCTCGCCCCTGGCTGCAGACACTTCCTACTACCAAGGAGTGTACTCCAGGCCTATTATGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| CDS-3UTR CAA 90 bp | AAATTAAATCAGACCCGAGACCTGGATTTCACCATGTCCAGAATGGGATGTGTTGAGCCCGCGCTCATGTaGCCGGAACCGCCGCCCATG | + |
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Preference number: 5 (lower is better) Translates to: KLNQTRDLDFTMSRMGCVEPALM*PEPPPM Trigger: CATGGGCGGCGGTTCCGGCAACATGAGCGCGGGCTC...AACACATCCCATTCTGGACATGGTGAAATCCAGGTCTCGGGTCTGATTTAATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| CDS-3UTR CAA 90 bp | GTGTTTTTCTCCTTTCTCCTGGTCCGGTACACCAGACTCTTACATTATTTTTCTGAGCCCGCGCTCATGTaGCCGGAACCGCCGCCCATG | + |
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Preference number: 5 (lower is better) Translates to: VFFSFLLVRYTRLLHYFSEPALM*PEPPPM Trigger: CATGGGCGGCGGTTCCGGCAACATGAGCGCGGGCTC...AGAAAAATAATGTAAGAGTCTGGTGTACCGGACCAGGAGAAAGGAGAAAAACAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| CDS-3UTR CAA 90 bp | ACCATGTCCAGAATGGGATGTGTTTTTCTCCTTTCTCCTGGTCCGGTACACCAGGTGGCTGTGGTGATGTaGCTGCTCGGACGACATGAG | + |
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Preference number: 5 (lower is better) Translates to: TMSRMGCVFLLSPGPVHQVAVVM*LLGRHE Trigger: CTCATGTCGTCCGAGCAGCAACATCACCACAGCCAC...CTGGTGTACCGGACCAGGAGAAAGGAGAAAAACACATCCCATTCTGGACATGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| CDS-3UTR CAA 90 bp | ACCATGTCCAGAATGGGATGTGTTTTTCTCCTTTCTCCTGGTCCGGTACACCAGCCTGGAGTACACTCCTaGGTAGTAGGAAGTGTCTGC | + |
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Preference number: 5 (lower is better) Translates to: TMSRMGCVFLLSPGPVHQPGVHS*VVGSVC Trigger: GCAGACACTTCCTACTACCAAGGAGTGTACTCCAGG...CTGGTGTACCGGACCAGGAGAAAGGAGAAAAACACATCCCATTCTGGACATGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| CDS-3UTR CAA 90 bp | GTGTTTTTCTCCTTTCTCCTGGTCCGGTACACCAGACTCTTACATTATTTTTCTGTGGCTGTGGTGATGTaGCTGCTCGGACGACATGAG | + |
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Preference number: 5 (lower is better) Translates to: VFFSFLLVRYTRLLHYFSVAVVM*LLGRHE Trigger: CTCATGTCGTCCGAGCAGCAACATCACCACAGCCAC...AGAAAAATAATGTAAGAGTCTGGTGTACCGGACCAGGAGAAAGGAGAAAAACAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| CDS-3UTR CAA 90 bp | GTGTTTTTCTCCTTTCTCCTGGTCCGGTACACCAGACTCTTACATTATTTTTCTCCTGGAGTACACTCCTaGGTAGTAGGAAGTGTCTGC | + |
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Preference number: 5 (lower is better) Translates to: VFFSFLLVRYTRLLHYFSPGVHS*VVGSVC Trigger: GCAGACACTTCCTACTACCAAGGAGTGTACTCCAGG...AGAAAAATAATGTAAGAGTCTGGTGTACCGGACCAGGAGAAAGGAGAAAAACAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| CDS-3UTR CAA 90 bp | GTGTTTTTCTCCTTTCTCCTGGTCCGGTACACCAGACTCTTACATTATTTTTCTTTCCTTCAGTGCCAGTaGCTTCTCACACTTGAAGCG | + |
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Preference number: 5 (lower is better) Translates to: VFFSFLLVRYTRLLHYFSFLQCQ*LLTLEA Trigger: CGCTTCAAGTGTGAGAAGCAACTGGCACTGAAGGAA...AGAAAAATAATGTAAGAGTCTGGTGTACCGGACCAGGAGAAAGGAGAAAAACAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| CDS-3UTR CAA 90 bp | CAACAACAAAAATCAAACTCTGCAGATGTCTTGAGAAGCAGTAGTCTACATAGATCGGACGACATGAGGTaGTTGATAGAGAAGGGGTGG | + |
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Preference number: 5 (lower is better) Translates to: QQQKSNSADVLRSSSLHRSDDMR*LIEKGW Trigger: CCACCCCTTCTCTATCAACAACCTCATGTCGTCCGA...TCTATGTAGACTACTGCTTCTCAAGACATCTGCAGAGTTTGATTTTTGTTGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| CDS-3UTR CAA 90 bp | ATAAATAAAGCACGCAGAAACCATAAATTAAATCAGACCCGAGACCTGGATTTCTTCCTTCAGTGCCAGTaGCTTCTCACACTTGAAGCG | + |
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Preference number: 5 (lower is better) Translates to: INKARRNHKLNQTRDLDFFLQCQ*LLTLEA Trigger: CGCTTCAAGTGTGAGAAGCAACTGGCACTGAAGGAA...GAAATCCAGGTCTCGGGTCTGATTTAATTTATGGTTTCTGCGTGCTTTATTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| CDS TCA 72 bp | GCCTGTCCCCCGAGCGGGCTCAGACTCGGACTCAGGTaGGGTCCCATGCCCGCCACGCCGGCCGCCCCGGCT | + |
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Preference number: 6 (lower is better) Translates to: ACPPSGLRLGLR*GPMPATPAAPA Trigger: AGCCGGGGCGGCCGGCGTGGCGGGCATGGGACCTCACCTGAGTCCGAGTCTGAGCCCGCTCGGGGGACAGGC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| CDS GCA 72 bp | CGAGCGGGCTCAGACTCGGACTCAGGTGAGGTCCCATaGCCGCCACGCCGGCCGCCCCGGCTGAGCCGCTCA | + |
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Preference number: 6 (lower is better) Translates to: RAGSDSDSGEVP*PPRRPPRLSRS Trigger: TGAGCGGCTCAGCCGGGGCGGCCGGCGTGGCGGGCATGGGACCTCACCTGAGTCCGAGTCTGAGCCCGCTCG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| CDS GCA 72 bp | CGCTCATGCCCGCCATGGCGCCGGCGCCCGGGGACATaGCAGCTAGCGACGGGCTCATTCCAGCGCCCACAT | + |
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Preference number: 6 (lower is better) Translates to: RSCPPWRRRPGT*QLATGSFQRPH Trigger: ATGTGGGCGCTGGAATGAGCCCGTCGCTAGCTGGCATGTCCCCGGGCGCCGGCGCCATGGCGGGCATGAGCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| CDS TCA 72 bp | CAGCCAGGGGCGAGGCATCCAGGCCCGCTTTGTTCGTaGCTGGGCCCATGGCCAAGCTGCCTGGCATGGGGG | + |
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Preference number: 6 (lower is better) Translates to: QPGARHPGPLCS*LGPWPSCLAWG Trigger: CCCCCATGCCAGGCAGCTTGGCCATGGGCCCAGTCACGAACAAAGCGGGCCTGGATGCCTCGCCCCTGGCTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 ENSMUST00000172928.2 |
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| CDS GCA 72 bp | GAGCCTGAGAGGCCTGGGACCCAGGAGCGGTCTTCTTaGCTCCGCTACTGGCCGCACCCGCGGCTTCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: EPERPGTQERSS*LRYWPHPRLPS Trigger: TGAAGGAAGCCGCGGGTGCGGCCAGTAGCGGAGGCAAGAAGACCGCTCCTGGGTCCCAGGCCTCTCAGGCTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 ENSMUST00000172928.2 |
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| CDS CCA 72 bp | GGTCCCGAGCGCGGCTCAGGCCGGCCTGCCCGTACATaGGGCTCATCGAGTTCATGTTGGCGTAGGGGGCAA | + |
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Preference number: 6 (lower is better) Translates to: GPERGSGRPART*GSSSSCWRRGQ Trigger: TTGCCCCCTACGCCAACATGAACTCGATGAGCCCCATGTACGGGCAGGCCGGCCTGAGCCGCGCTCGGGACC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| CDS CCA 72 bp | GAGGTTTGGCGTGTGTGTAGCTGCGTCGGTATGTCTTaGGGTCCCGAGCGCGGCTCAGGCCGGCCTGCCCGT | + |
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Preference number: 6 (lower is better) Translates to: EVWRVCSCVGMS*GPERGSGRPAR Trigger: ACGGGCAGGCCGGCCTGAGCCGCGCTCGGGACCCCAAGACATACCGACGCAGCTACACACACGCCAAACCTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| CDS GCA 72 bp | TATGTCTTGGGGTCCCGAGCGCGGCTCAGGCCGGCCTaGCCGTACATGGGGCTCATCGAGTTCATGTTGGCG | + |
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Preference number: 6 (lower is better) Translates to: YVLGSRARLRPA*PYMGLIEFMLA Trigger: CGCCAACATGAACTCGATGAGCCCCATGTACGGGCAGGCCGGCCTGAGCCGCGCTCGGGACCCCAAGACATA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| CDS GCA 72 bp | CATAGGATGACATGTTCATGGAGCCCGCGCTCATGTTaGCGGAACCGCCGCCCATGGCAGCCGCGGACATGC | + |
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Preference number: 6 (lower is better) Translates to: HRMTCSWSPRSC*RNRRPWQPRTC Trigger: GCATGTCCGCGGCTGCCATGGGCGGCGGTTCCGGCAACATGAGCGCGGGCTCCATGAACATGTCATCCTATG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| CDS CCA 72 bp | TGGAGCCCGCGCTCATGTTGCCGGAACCGCCGCCCATaGCAGCCGCGGACATGCTCATGTATGTGTTCATGC | + |
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Preference number: 6 (lower is better) Translates to: WSPRSCCRNRRP*QPRTCSCMCSC Trigger: GCATGAACACATACATGAGCATGTCCGCGGCTGCCATGGGCGGCGGTTCCGGCAACATGAGCGCGGGCTCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| CDS CCA 72 bp | GGCTCATTCCAGCGCCCACATAGGATGACATGTTCATaGAGCCCGCGCTCATGTTGCCGGAACCGCCGCCCA | + |
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Preference number: 6 (lower is better) Translates to: GSFQRPHRMTCS*SPRSCCRNRRP Trigger: TGGGCGGCGGTTCCGGCAACATGAGCGCGGGCTCCATGAACATGTCATCCTATGTGGGCGCTGGAATGAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| CDS CCA 72 bp | GGCCAAGCTGCCTGGCATGGGGGAACCATAGCCCCCTaGGTAGTGCATGACCTGTTCGTAGGCCTTGAGGTC | + |
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Preference number: 6 (lower is better) Translates to: GQAAWHGGTIAP*VVHDLFVGLEV Trigger: GACCTCAAGGCCTACGAACAGGTCATGCACTACCCAGGGGGCTATGGTTCCCCCATGCCAGGCAGCTTGGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 ENSMUST00000172928.2 |
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| CDS CCA 72 bp | CGCTTTGTTCGTGACTGGGCCCATGGCCAAGCTGCCTaGCATGGGGGAACCATAGCCCCCTGGGTAGTGCAT | + |
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Preference number: 6 (lower is better) Translates to: RFVRDWAHGQAA*HGGTIAPWVVH Trigger: ATGCACTACCCAGGGGGCTATGGTTCCCCCATGCCAGGCAGCTTGGCCATGGGCCCAGTCACGAACAAAGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 ENSMUST00000172928.2 |
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| CDS GCA 72 bp | TGTTCATGCCATTCATCCCCAGGCCGGCGTTCATGTTaGTCACGGAAGAGTAGCCCTCGGGCTCCGCGTAGT | + |
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Preference number: 6 (lower is better) Translates to: CSCHSSPGRRSC*SRKSSPRAPRS Trigger: ACTACGCGGAGCCCGAGGGCTACTCTTCCGTGAGCAACATGAACGCCGGCCTGGGGATGAATGGCATGAACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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| CDS GCA 72 bp | AGGCCTGGAGTACACTCCTTGGTAGTAGGAAGTGTCTaGAGCCAGGGGCGAGGCATCCAGGCCCGCTTTGTT | + |
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Preference number: 6 (lower is better) Translates to: RPGVHSLVVGSV*SQGRGIQARFV Trigger: AACAAAGCGGGCCTGGATGCCTCGCCCCTGGCTGCAGACACTTCCTACTACCAAGGAGTGTACTCCAGGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047315.10 ENSMUST00000109964.8 |
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