Pregenerated sensors for FOSL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029135Ensembl transcript IDs: ENSMUST00000031017.11
Found 151 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGCCCCTTCAGCCACCTGAGGAGCACAAGCCAGATAGGAGGAGTCTaGGGAGAGAGGAGCCTGGGATGGGCAGATGCTGCTGTGGATGAG | + |
|
Preference number: 1 (lower is better) Translates to: GPFSHLRSTSQIGGV*GERSLGWADAAVDE Trigger: CTCATCCACAGCAGCATCTGCCCATCCCAGGCTCCTCTCTCCTCAGACTCCTCCTATCTGGCTTGTGCTCCTCAGGTGGCTGAAGGGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR TCA 90 bp | AGTCTGAGGAGAGAGGAGCCTGGGATGGGCAGATGCTGCTGTGGATaGGTCTTTGAGGACCACCAGACTAGAGGCACTCCCACCTGGGAG | + |
|
Preference number: 1 (lower is better) Translates to: SLRREEPGMGRCCCG*VFEDHQTRGTPTWE Trigger: CTCCCAGGTGGGAGTGCCTCTAGTCTGGTGGTCCTCAAAGACTCATCCACAGCAGCATCTGCCCATCCCAGGCTCCTCTCTCCTCAGACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR TCA 90 bp | CCCCTCTCTACCAAGCCAAGCCTGCTCCTTTCAGCTCTGCTAGGCTaGGCATGCTTCCCACATGGTCCCTGTGTCCTGTGTGCTTCTGCA | + |
|
Preference number: 1 (lower is better) Translates to: PLSTKPSLLLSALLG*ACFPHGPCVLCASA Trigger: TGCAGAAGCACACAGGACACAGGGACCATGTGGGAAGCATGCTCAGCCTAGCAGAGCTGAAAGGAGCAGGCTTGGCTTGGTAGAGAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR CCA 90 bp | GGAGTGTCCAACCAGGGTACCAAGTCCCAGGCCTGTGACCTGGGTTaGATCCATGCTATGGGCAGAAGGGGGCTTTGGGAAAGGACAGAA | + |
|
Preference number: 1 (lower is better) Translates to: GVSNQGTKSQACDLG*IHAMGRRGLWERTE Trigger: TTCTGTCCTTTCCCAAAGCCCCCTTCTGCCCATAGCATGGATCCAACCCAGGTCACAGGCCTGGGACTTGGTACCCTGGTTGGACACTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR CCA 90 bp | TCTCAGGAGTGTCCAACCAGGGTACCAAGTCCCAGGCCTGTGACCTaGGTTGGATCCATGCTATGGGCAGAAGGGGGCTTTGGGAAAGGA | + |
|
Preference number: 1 (lower is better) Translates to: SQECPTRVPSPRPVT*VGSMLWAEGGFGKG Trigger: TCCTTTCCCAAAGCCCCCTTCTGCCCATAGCATGGATCCAACCCAGGTCACAGGCCTGGGACTTGGTACCCTGGTTGGACACTCCTGAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR TCA 90 bp | TGCCCTGTATTAACCCAGAGCTGCTCACAGTCCAGCCCAAGTTCATaGCAGCAGAGGACACACGTGTACAAAGCCCTCACCTCCCCACCC | + |
|
Preference number: 1 (lower is better) Translates to: CPVLTQSCSQSSPSS*QQRTHVYKALTSPP Trigger: GGGTGGGGAGGTGAGGGCTTTGTACACGTGTGTCCTCTGCTGTCATGAACTTGGGCTGGACTGTGAGCAGCTCTGGGTTAATACAGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR GCA 90 bp | CCTAACAAAACTGGTGGAGACCAACGACTCCCAGAGGGGTGGGCCTaGTGGGTTAGGAGGCCACTCTGGAGTTGGCCAGGAGAATATGAA | + |
|
Preference number: 1 (lower is better) Translates to: PNKTGGDQRLPEGWA*WVRRPLWSWPGEYE Trigger: TTCATATTCTCCTGGCCAACTCCAGAGTGGCCTCCTAACCCAGCAGGCCCACCCCTCTGGGAGTCGTTGGTCTCCACCAGTTTTGTTAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR CCA 90 bp | CAACGACTCCCAGAGGGGTGGGCCTGCTGGGTTAGGAGGCCACTCTaGAGTTGGCCAGGAGAATATGAAAGGAAACCCACTGGATTCATC | + |
|
Preference number: 1 (lower is better) Translates to: QRLPEGWACWVRRPL*SWPGEYERKPTGFI Trigger: GATGAATCCAGTGGGTTTCCTTTCATATTCTCCTGGCCAACTCCAGAGTGGCCTCCTAACCCAGCAGGCCCACCCCTCTGGGAGTCGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR CCA 90 bp | GCCTGTGACCTGGGTTGGATCCATGCTATGGGCAGAAGGGGGCTTTaGGAAAGGACAGAACAGGGCGCAGCTTCATTTCAGAAATACCCA | + |
|
Preference number: 1 (lower is better) Translates to: ACDLGWIHAMGRRGL*ERTEQGAASFQKYP Trigger: TGGGTATTTCTGAAATGAAGCTGCGCCCTGTTCTGTCCTTTCCCAAAGCCCCCTTCTGCCCATAGCATGGATCCAACCCAGGTCACAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR GCA 90 bp | AGGCTGAGCATGCTTCCCACATGGTCCCTGTGTCCTGTGTGCTTCTaGATGCAAGTGTTTATGGGAACTTGGGGTAAGAAGGGCATCGGT | + |
|
Preference number: 1 (lower is better) Translates to: RLSMLPTWSLCPVCF*MQVFMGTWGKKGIG Trigger: ACCGATGCCCTTCTTACCCCAAGTTCCCATAAACACTTGCATGCAGAAGCACACAGGACACAGGGACCATGTGGGAAGCATGCTCAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR GCA 90 bp | CAGGCCGGAAGGGAAGGTGACCTCAGAGGCCCATTTAGCTGGCTGTaGTTTCTGGCCCCGATGTCAACACAGATGAAAACTGAACTGAAA | + |
|
Preference number: 1 (lower is better) Translates to: QAGREGDLRGPFSWL*FLAPMSTQMKTELK Trigger: TTTCAGTTCAGTTTTCATCTGTGTTGACATCGGGGCCAGAAAGCACAGCCAGCTAAATGGGCCTCTGAGGTCACCTTCCCTTCCGGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR GCA 90 bp | CAAGCAGGGTTCTCTCTCCCTAATGCCAGAGAAAGCTACAGGTTCTaGTTCCTGTTGGCTTTGACATGTTCCCATGACTGGCCCCCATGG | + |
|
Preference number: 1 (lower is better) Translates to: QAGFSLPNARESYRF*FLLALTCSHDWPPW Trigger: CCATGGGGGCCAGTCATGGGAACATGTCAAAGCCAACAGGAAGCAGAACCTGTAGCTTTCTCTGGCATTAGGGAGAGAGAACCCTGCTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR CCA 90 bp | CCACATGGTCCCTGTGTCCTGTGTGCTTCTGCATGCAAGTGTTTATaGGAACTTGGGGTAAGAAGGGCATCGGTCTGTGAAGGTACCCCT | + |
|
Preference number: 1 (lower is better) Translates to: PHGPCVLCASACKCL*ELGVRRASVCEGTP Trigger: AGGGGTACCTTCACAGACCGATGCCCTTCTTACCCCAAGTTCCCATAAACACTTGCATGCAGAAGCACACAGGACACAGGGACCATGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR CCA 90 bp | AAGCCTGCTCCTTTCAGCTCTGCTAGGCTGAGCATGCTTCCCACATaGTCCCTGTGTCCTGTGTGCTTCTGCATGCAAGTGTTTATGGGA | + |
|
Preference number: 1 (lower is better) Translates to: KPAPFSSARLSMLPT*SLCPVCFCMQVFMG Trigger: TCCCATAAACACTTGCATGCAGAAGCACACAGGACACAGGGACCATGTGGGAAGCATGCTCAGCCTAGCAGAGCTGAAAGGAGCAGGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR TCA 90 bp | CTGAGGCTTCTCAAGAAAAAGGATTCGCTTCGCTTGCAAGATGAATaGGGGAGGGCGTGTCCCAGGGCTTCTAAGAGATCAACCAGTGTC | + |
|
Preference number: 1 (lower is better) Translates to: LRLLKKKDSLRLQDE*GRACPRASKRSTSV Trigger: GACACTGGTTGATCTCTTAGAAGCCCTGGGACACGCCCTCCCTCATTCATCTTGCAAGCGAAGCGAATCCTTTTTCTTGAGAAGCCTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR GCA 90 bp | GAGCCAAGGCATACAGGAAAGAACACATTGAGATTATCTCCTTTCTaGCCCCCTCTCTACCAAGCCAAGCCTGCTCCTTTCAGCTCTGCT | + |
|
Preference number: 1 (lower is better) Translates to: EPRHTGKNTLRLSPF*PPLYQAKPAPFSSA Trigger: AGCAGAGCTGAAAGGAGCAGGCTTGGCTTGGTAGAGAGGGGGGCAGAAAGGAGATAATCTCAATGTGTTCTTTCCTGTATGCCTTGGCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR CCA 90 bp | TTCTGCTTCCTGTTGGCTTTGACATGTTCCCATGACTGGCCCCCATaGGCACACTTTGCCTATGAAAGCAGCAGTCTGAGCTCCCTAAAA | + |
|
Preference number: 1 (lower is better) Translates to: FCFLLALTCSHDWPP*AHFAYESSSLSSLK Trigger: TTTTAGGGAGCTCAGACTGCTGCTTTCATAGGCAAAGTGTGCCCATGGGGGCCAGTCATGGGAACATGTCAAAGCCAACAGGAAGCAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR GCA 90 bp | GTGGCCACGACAAAACTGTTTCATGCTAGCTGTTTAAGGATTGCCTaGCCTGTATTAACCCAGAGCTGCTCACAGTCCAGCCCAAGTTCA | + |
|
Preference number: 1 (lower is better) Translates to: VATTKLFHASCLRIA*PVLTQSCSQSSPSS Trigger: TGAACTTGGGCTGGACTGTGAGCAGCTCTGGGTTAATACAGGGCAGGCAATCCTTAAACAGCTAGCATGAAACAGTTTTGTCGTGGCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR TCA 90 bp | CATACCCTCTGTCAAAATCTGACCCAGCTCCTCCTGAACATGTTGTaGGTACTGGGTCATTACAGACATTTGGTGAGGCGTGGCCAAAAC | + |
|
Preference number: 1 (lower is better) Translates to: HTLCQNLTQLLLNML*VLGHYRHLVRRGQN Trigger: GTTTTGGCCACGCCTCACCAAATGTCTGTAATGACCCAGTACTCACAACATGTTCAGGAGGAGCTGGGTCAGATTTTGACAGAGGGTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR TCA 90 bp | ATGAATGTTTGCTCAGGGAAGGAAGTCACTGTGAAAGACAAATGGTaGCATCTCAAGGAACACTTTTGGTCTCTCAGGAAAGTGGAGGAA | + |
|
Preference number: 1 (lower is better) Translates to: MNVCSGKEVTVKDKW*HLKEHFWSLRKVEE Trigger: TTCCTCCACTTTCCTGAGAGACCAAAAGTGTTCCTTGAGATGTCACCATTTGTCTTTCACAGTGACTTCCTTCCCTGAGCAAACATTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR CCA 90 bp | TCACTCCACGTCATTGACATATACCAAATACAGATGCATGAAGCTTaGGTCCTACTCTATACCAAAATACGATATATACACCTCCCACTG | + |
|
Preference number: 1 (lower is better) Translates to: SLHVIDIYQIQMHEA*VLLYTKIRYIHLPL Trigger: CAGTGGGAGGTGTATATATCGTATTTTGGTATAGAGTAGGACCCAAGCTTCATGCATCTGTATTTGGTATATGTCAATGACGTGGAGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR GCA 90 bp | TGTGTCACATACAGTACACAGAACAACACATCACACCACCACAGATaGTTCCGAGCAGAGATACTCCTCAAAAATTTAAAACTATACAAA | + |
|
Preference number: 1 (lower is better) Translates to: CVTYSTQNNTSHHHR*FRAEILLKNLKLYK Trigger: TTTGTATAGTTTTAAATTTTTGAGGAGTATCTCTGCTCGGAAGCATCTGTGGTGGTGTGATGTGTTGTTCTGTGTACTGTATGTGACACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR GCA 90 bp | CTTGGGTCCTACTCTATACCAAAATACGATATATACACCTCCCACTaGAAAAGGAATCTGATACCTAGTCTTTATACAAAGCTGAATATT | + |
|
Preference number: 1 (lower is better) Translates to: LGSYSIPKYDIYTSH*KRNLIPSLYTKLNI Trigger: AATATTCAGCTTTGTATAAAGACTAGGTATCAGATTCCTTTTGCAGTGGGAGGTGTATATATCGTATTTTGGTATAGAGTAGGACCCAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR GCA 90 bp | GATGCTGGTTTGAAGATAAATGCTAAGATAACACAAGCACAAAGCTaGAAGACCCTTTACTTACAGTTTAAAAAGAAAGTTATACACAGC | + |
|
Preference number: 1 (lower is better) Translates to: DAGLKINAKITQAQS*KTLYLQFKKKVIHS Trigger: GCTGTGTATAACTTTCTTTTTAAACTGTAAGTAAAGGGTCTTGCAGCTTTGTGCTTGTGTTATCTTAGCATTTATCTTCAAACCAGCATC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR GCA 90 bp | AATAGCAAATTTCACTCCACGTCATTGACATATACCAAATACAGATaGATGAAGCTTGGGTCCTACTCTATACCAAAATACGATATATAC | + |
|
Preference number: 1 (lower is better) Translates to: NSKFHSTSLTYTKYR*MKLGSYSIPKYDIY Trigger: GTATATATCGTATTTTGGTATAGAGTAGGACCCAAGCTTCATGCATCTGTATTTGGTATATGTCAATGACGTGGAGTGAAATTTGCTATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR-3UTR CCA 90 bp | GCGCATCCCAGTGACGGCAGCTCACCGGCAGAACTCAGGGAGCCCACGGTCTGTCCCCTTCCGCCCCAGTaGAAGAGTCATCTGCTTCCC | + |
|
Preference number: 2 (lower is better) Translates to: AHPSDGSSPAELREPTVCPLPPQ*KSHLLP Trigger: GGGAAGCAGATGACTCTTCCACTGGGGCGGAAGGGG...ACAGACCGTGGGCTCCCTGAGTTCTGCCGGTGAGCTGCCGTCACTGGGATGCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR-3UTR GCA 90 bp | CCAGACTTGGAGTCTCAGGAGTGTCCAACCAGGGTACCAAGTCCCAGGCCTGTGACAGAGCTGTGCCCTTaGTGGAGGCTGGGACACCCA | + |
|
Preference number: 2 (lower is better) Translates to: PDLESQECPTRVPSPRPVTELCP*WRLGHP Trigger: TGGGTGTCCCAGCCTCCAGCAAGGGCACAGCTCTGT...CACAGGCCTGGGACTTGGTACCCTGGTTGGACACTCCTGAGACTCCAAGTCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR-3UTR CCA 90 bp | CCTGGCTTGGTAATTAGACGTTTGGCAAACCCAACCTGTGCCCCTGTTGTCGCACCCTTCGGGACACAGTaGGTGCCCCTTCCGCCCCAG | + |
|
Preference number: 2 (lower is better) Translates to: PGLVIRRLANPTCAPVVAPFGTQ*VPLPPQ Trigger: CTGGGGCGGAAGGGGCACCCACTGTGTCCCGAAGGG...TGCGACAACAGGGGCACAGGTTGGGTTTGCCAAACGTCTAATTACCAAGCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR-3UTR GCA 90 bp | TTGACATGTTCCCATGACTGGCCCCCATGGGCACACTTTGCCTATGAAAGCAGCCCAGAGGGGTGGGCCTaGTGGGTTAGGAGGCCACTC | + |
|
Preference number: 2 (lower is better) Translates to: LTCSHDWPPWAHFAYESSPEGWA*WVRRPL Trigger: GAGTGGCCTCCTAACCCAGCAGGCCCACCCCTCTGG...GCTGCTTTCATAGGCAAAGTGTGCCCATGGGGGCCAGTCATGGGAACATGTCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR-3UTR TCA 90 bp | TTGACATGTTCCCATGACTGGCCCCCATGGGCACACTTTGCCTATGAAAGCAGCAGTAGCAGAGACCACTaGGAGCAGAGGGCGGCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: LTCSHDWPPWAHFAYESSSSRDH*EQRAAP Trigger: AGGAGCCGCCCTCTGCTCTCAGTGGTCTCTGCTACT...GCTGCTTTCATAGGCAAAGTGTGCCCATGGGGGCCAGTCATGGGAACATGTCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR-3UTR TCA 90 bp | CACCAGACTAGAGGCACTCCCACCTGGGAGTCTCTGAAGAAAGCCCTCTTACCCTTTGACATGTTCCCATaGCTGGCCCCCATGGGCACA | + |
|
Preference number: 2 (lower is better) Translates to: HQTRGTPTWESLKKALLPFDMFP*LAPMGT Trigger: TGTGCCCATGGGGGCCAGTCATGGGAACATGTCAAA...GGGTAAGAGGGCTTTCTTCAGAGACTCCCAGGTGGGAGTGCCTCTAGTCTGGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR-3UTR GCA 90 bp | TTGACATGTTCCCATGACTGGCCCCCATGGGCACACTTTGCCTATGAAAGCAGCGGTACCTGGGGCTGCTaGGGCTGCCAGAAACCATCT | + |
|
Preference number: 2 (lower is better) Translates to: LTCSHDWPPWAHFAYESSGTWGC*GCQKPS Trigger: AGATGGTTTCTGGCAGCCGCAGCAGCCCCAGGTACC...GCTGCTTTCATAGGCAAAGTGTGCCCATGGGGGCCAGTCATGGGAACATGTCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR-3UTR CCA 90 bp | CACCAGACTAGAGGCACTCCCACCTGGGAGTCTCTGAAGAAAGCCCTCTTACCCGTAACCACAGCGCACTaGGTGTGTAGGGAGGGAAGT | + |
|
Preference number: 2 (lower is better) Translates to: HQTRGTPTWESLKKALLPVTTAH*VCREGS Trigger: ACTTCCCTCCCTACACACCCAGTGCGCTGTGGTTAC...GGGTAAGAGGGCTTTCTTCAGAGACTCCCAGGTGGGAGTGCCTCTAGTCTGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR-3UTR GCA 90 bp | TTGACATGTTCCCATGACTGGCCCCCATGGGCACACTTTGCCTATGAAAGCAGCGGCAAACCCAACCTGTaGCCCTGTTGTCGCACTCAC | + |
|
Preference number: 2 (lower is better) Translates to: LTCSHDWPPWAHFAYESSGKPNL*PCCRTH Trigger: GTGAGTGCGACAACAGGGGCACAGGTTGGGTTTGCC...GCTGCTTTCATAGGCAAAGTGTGCCCATGGGGGCCAGTCATGGGAACATGTCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR-3UTR CCA 90 bp | CACCAGACTAGAGGCACTCCCACCTGGGAGTCTCTGAAGAAAGCCCTCTTACCCAAAGGTGCTGGTCCCTaGGAAGGGTGTGGTAATGAT | + |
|
Preference number: 2 (lower is better) Translates to: HQTRGTPTWESLKKALLPKGAGP*EGCGND Trigger: ATCATTACCACACCCTTCCCAGGGACCAGCACCTTT...GGGTAAGAGGGCTTTCTTCAGAGACTCCCAGGTGGGAGTGCCTCTAGTCTGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR-3UTR CCA 90 bp | TTGACATGTTCCCATGACTGGCCCCCATGGGCACACTTTGCCTATGAAAGCAGCCCCACAGAAGCCTGGTaGCCACGACAAAACTGTTTC | + |
|
Preference number: 2 (lower is better) Translates to: LTCSHDWPPWAHFAYESSPTEAW*PRQNCF Trigger: GAAACAGTTTTGTCGTGGCCACCAGGCTTCTGTGGG...GCTGCTTTCATAGGCAAAGTGTGCCCATGGGGGCCAGTCATGGGAACATGTCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR CAA 90 bp | CCATGTGGCTTTGTTGGCACAAATCCTGGCTTGGTAATTAGACGTTaGGCAAACCCAACCTGTGCCCCTGTTGTCGCACTCACACCCTGT | + |
|
Preference number: 2 (lower is better) Translates to: PCGFVGTNPGLVIRR*ANPTCAPVVALTPC Trigger: ACAGGGTGTGAGTGCGACAACAGGGGCACAGGTTGGGTTTGCCAAACGTCTAATTACCAAGCCAGGATTTGTGCCAACAAAGCCACATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR-3UTR CCA 90 bp | TTGACATGTTCCCATGACTGGCCCCCATGGGCACACTTTGCCTATGAAAGCAGCAGGCCACTCTGGAGTTaGCCAGGAGAATATGAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: LTCSHDWPPWAHFAYESSRPLWS*PGEYER Trigger: CCTTTCATATTCTCCTGGCCAACTCCAGAGTGGCCT...GCTGCTTTCATAGGCAAAGTGTGCCCATGGGGGCCAGTCATGGGAACATGTCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR-3UTR CCA 90 bp | TGCATGAAGCTTGGGTCCTACTCTATACCAAAATACGATATATACACCTCCCACCGACTCCCAGAGGGGTaGGCCTGCTGGGTTAGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: CMKLGSYSIPKYDIYTSHRLPEG*ACWVRR Trigger: CCTCCTAACCCAGCAGGCCCACCCCTCTGGGAGTCG...GTGGGAGGTGTATATATCGTATTTTGGTATAGAGTAGGACCCAAGCTTCATGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR-3UTR CCA 90 bp | CACCAGACTAGAGGCACTCCCACCTGGGAGTCTCTGAAGAAAGCCCTCTTACCCGTTTGTGACCCAACTTaGACAGTGGATCAGAGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: HQTRGTPTWESLKKALLPVCDPT*TVDQRK Trigger: TTTCCTCTGATCCACTGTCCAAGTTGGGTCACAAAC...GGGTAAGAGGGCTTTCTTCAGAGACTCCCAGGTGGGAGTGCCTCTAGTCTGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR CAA 90 bp | TTCTCTCTCCCTAATGCCAGAGAAAGCTACAGGTTCTGCTTCCTGTaGGCTTTGACATGTTCCCATGACTGGCCCCCATGGGCACACTTT | + |
|
Preference number: 2 (lower is better) Translates to: FSLPNARESYRFCFL*ALTCSHDWPPWAHF Trigger: AAAGTGTGCCCATGGGGGCCAGTCATGGGAACATGTCAAAGCCAACAGGAAGCAGAACCTGTAGCTTTCTCTGGCATTAGGGAGAGAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR-3UTR GCA 90 bp | TGCATGAAGCTTGGGTCCTACTCTATACCAAAATACGATATATACACCTCCCACCAGGGGACAGAGCTGTaGCCTTGCTGGAGGCTGGGA | + |
|
Preference number: 2 (lower is better) Translates to: CMKLGSYSIPKYDIYTSHQGTEL*PCWRLG Trigger: TCCCAGCCTCCAGCAAGGGCACAGCTCTGTCCCCTG...GTGGGAGGTGTATATATCGTATTTTGGTATAGAGTAGGACCCAAGCTTCATGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR-3UTR CCA 90 bp | TTGACATGTTCCCATGACTGGCCCCCATGGGCACACTTTGCCTATGAAAGCAGCTGTGTCAACATGCAGTaGGGACAAAGGGAGAGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: LTCSHDWPPWAHFAYESSCVNMQ*GQRERK Trigger: CTTTCTCTCCCTTTGTCCCCACTGCATGTTGACACA...GCTGCTTTCATAGGCAAAGTGTGCCCATGGGGGCCAGTCATGGGAACATGTCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR-3UTR TCA 90 bp | GCTCCAGAAATAAAAGCGCTTTACTATCTGGACCACCCAGATGAAATGTCATGGAGCCGCAGGCGCGTCTaGGTCCACAAACCAAGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: APEIKALYYLDHPDEMSWSRRRV*VHKPSS Trigger: AGAACTTGGTTTGTGGACTCAGACGCGCCTGCGGCT...CCATGACATTTCATCTGGGTGGTCCAGATAGTAAAGCGCTTTTATTTCTGGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR-3UTR TCA 90 bp | GGAGTCTCTGAAGAAAGCCCTCTTACCCCCAAGTGTTTTTATTTAACCTGGGGGGCTTCCTGTTGGCTTTaGCATGTTCCCATGACTGGC | + |
|
Preference number: 2 (lower is better) Translates to: GVSEESPLTPKCFYLTWGASCWL*HVPMTG Trigger: GCCAGTCATGGGAACATGTCAAAGCCAACAGGAAGC...CCCCCAGGTTAAATAAAAACACTTGGGGGTAAGAGGGCTTTCTTCAGAGACTCC 50% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR CAA 90 bp | GCATTAGCACTAGAAACAAGTTCTAACCAGGCTCCACTTCCATACTaGTGTCAACATGCAGTGGGGACAAAGGGAGAGAAAGGCAGGGGA | + |
|
Preference number: 2 (lower is better) Translates to: ALALETSSNQAPLPY*CQHAVGTKGEKGRG Trigger: TCCCCTGCCTTTCTCTCCCTTTGTCCCCACTGCATGTTGACACAAGTATGGAAGTGGAGCCTGGTTAGAACTTGTTTCTAGTGCTAATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR-3UTR TCA 90 bp | TGGGTTAGGAGGCCACTCTGGAGTTGGCCAGGAGAATATGAAAGGAAACCCACTAATAATATTGCACTTTaGCTGCCCCTTCGGGACACA | + |
|
Preference number: 2 (lower is better) Translates to: WVRRPLWSWPGEYERKPTNNIAL*LPLRDT Trigger: TGTGTCCCGAAGGGGCAGTCAAAGTGCAATATTATT...AGTGGGTTTCCTTTCATATTCTCCTGGCCAACTCCAGAGTGGCCTCCTAACCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR-3UTR GCA 90 bp | GGAGTCTCTGAAGAAAGCCCTCTTACCCCCAAGTGTTTTTATTTAACCTGGGGGATCCTCAAAGAGATGTaGATCTCTGAGACCGGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: GVSEESPLTPKCFYLTWGILKEM*ISETGE Trigger: CTCCCCGGTCTCAGAGATGCACATCTCTTTGAGGAT...CCCCCAGGTTAAATAAAAACACTTGGGGGTAAGAGGGCTTTCTTCAGAGACTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR-3UTR CCA 90 bp | GGAGTCTCTGAAGAAAGCCCTCTTACCCCCAAGTGTTTTTATTTAACCTGGGGGCCACCAGGAGTTAAGTaGAAGCAAGCAGGGTTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: GVSEESPLTPKCFYLTWGPPGVK*KQAGFS Trigger: AGAGAACCCTGCTTGCTTCCACTTAACTCCTGGTGG...CCCCCAGGTTAAATAAAAACACTTGGGGGTAAGAGGGCTTTCTTCAGAGACTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR-3UTR GCA 90 bp | TGCATGAAGCTTGGGTCCTACTCTATACCAAAATACGATATATACACCTCCCACCTCAAGGCCCTGGAGTaGTTAAAGGTGCTGGTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: CMKLGSYSIPKYDIYTSHLKALE*LKVLVP Trigger: AGGGACCAGCACCTTTAAGCACTCCAGGGCCTTGAG...GTGGGAGGTGTATATATCGTATTTTGGTATAGAGTAGGACCCAAGCTTCATGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR-3UTR GCA 90 bp | CGGTCTGTAACCACAGCGCACTGGGTGTGTAGGGAGGGAAGTTTCAATAATATTAGTGGAAGAGTCATCTaGTTCCCCAGCTCCAGAAAT | + |
|
Preference number: 2 (lower is better) Translates to: RSVTTAHWVCREGSFNNISGRVI*FPSSRN Trigger: ATTTCTGGAGCTGGGGAAGCAGATGACTCTTCCACT...AATATTATTGAAACTTCCCTCCCTACACACCCAGTGCGCTGTGGTTACAGACCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR CAA 90 bp | GCAGCAAGCTCCTACCAAGCTTTTCTTAGTGCAAATCCTGTAGGCTaGTGTCACATACAGTACACAGAACAACACATCACACCACCACAG | + |
|
Preference number: 2 (lower is better) Translates to: AASSYQAFLSANPVG*CHIQYTEQHITPPQ Trigger: CTGTGGTGGTGTGATGTGTTGTTCTGTGTACTGTATGTGACACAAGCCTACAGGATTTGCACTAAGAAAAGCTTGGTAGGAGCTTGCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR-3UTR TCA 90 bp | GAGTCATCTGCTTCCCCAGCTCCAGAAATAAAAGCGCTTTACTATCTGGACCACACAAACCAAGTTCTCTaGGGCTTCTCAAGAAAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: ESSASPAPEIKALYYLDHTNQVL*GFSRKR Trigger: CCTTTTTCTTGAGAAGCCTCAGAGAACTTGGTTTGT...GTGGTCCAGATAGTAAAGCGCTTTTATTTCTGGAGCTGGGGAAGCAGATGACTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR-3UTR TCA 90 bp | TGCATGAAGCTTGGGTCCTACTCTATACCAAAATACGATATATACACCTCCCACGCAGGCATGCATGAGTaGCATGTTTGTGACCCAACT | + |
|
Preference number: 2 (lower is better) Translates to: CMKLGSYSIPKYDIYTSHAGMHE*HVCDPT Trigger: AGTTGGGTCACAAACATGTCACTCATGCATGCCTGC...GTGGGAGGTGTATATATCGTATTTTGGTATAGAGTAGGACCCAAGCTTCATGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR-3UTR CCA 90 bp | TGCATGAAGCTTGGGTCCTACTCTATACCAAAATACGATATATACACCTCCCACACTAGGACAGCCATGTaGCTTTGTTGGCACAAATCC | + |
|
Preference number: 2 (lower is better) Translates to: CMKLGSYSIPKYDIYTSHTRTAM*LCWHKS Trigger: GGATTTGTGCCAACAAAGCCACATGGCTGTCCTAGT...GTGGGAGGTGTATATATCGTATTTTGGTATAGAGTAGGACCCAAGCTTCATGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR CAA 90 bp | GGAAGTCACTGTGAAAGACAAATGGTGACATCTCAAGGAACACTTTaGGTCTCTCAGGAAAGTGGAGGAAAAATGAATCCAGAAGCTTCG | + |
|
Preference number: 2 (lower is better) Translates to: GSHCERQMVTSQGTL*VSQESGGKMNPEAS Trigger: CGAAGCTTCTGGATTCATTTTTCCTCCACTTTCCTGAGAGACCAAAAGTGTTCCTTGAGATGTCACCATTTGTCTTTCACAGTGACTTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR-3UTR GCA 90 bp | TGCATGAAGCTTGGGTCCTACTCTATACCAAAATACGATATATACACCTCCCACGAAAGCTACAGGTTCTaGTTCCTGTTGGCTTTGACA | + |
|
Preference number: 2 (lower is better) Translates to: CMKLGSYSIPKYDIYTSHESYRF*FLLALT Trigger: TGTCAAAGCCAACAGGAAGCAGAACCTGTAGCTTTC...GTGGGAGGTGTATATATCGTATTTTGGTATAGAGTAGGACCCAAGCTTCATGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR CAA 90 bp | ACCCATTTGCCTCCAGGATCTAATAGCAAATTTCACTCCACGTCATaGACATATACCAAATACAGATGCATGAAGCTTGGGTCCTACTCT | + |
|
Preference number: 2 (lower is better) Translates to: THLPPGSNSKFHSTS*TYTKYRCMKLGSYS Trigger: AGAGTAGGACCCAAGCTTCATGCATCTGTATTTGGTATATGTCAATGACGTGGAGTGAAATTTGCTATTAGATCCTGGAGGCAAATGGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR-3UTR CCA 90 bp | TGCATGAAGCTTGGGTCCTACTCTATACCAAAATACGATATATACACCTCCCACGGTCTCTCAGGAAAGTaGAGGAAAAATGAATCCAGA | + |
|
Preference number: 2 (lower is better) Translates to: CMKLGSYSIPKYDIYTSHGLSGK*RKNESR Trigger: TCTGGATTCATTTTTCCTCCACTTTCCTGAGAGACC...GTGGGAGGTGTATATATCGTATTTTGGTATAGAGTAGGACCCAAGCTTCATGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR-3UTR TCA 90 bp | TGCATGAAGCTTGGGTCCTACTCTATACCAAAATACGATATATACACCTCCCACTTAAATATCCACAGGTaGTGTCACTATGAGAGTTGG | + |
|
Preference number: 2 (lower is better) Translates to: CMKLGSYSIPKYDIYTSHLNIHR*CHYESW Trigger: CCAACTCTCATAGTGACATCACCTGTGGATATTTAA...GTGGGAGGTGTATATATCGTATTTTGGTATAGAGTAGGACCCAAGCTTCATGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR GCA 72 bp | CAGGAGAGCAGCCAGGGGAGGCTAGGTACCTGGGGCTaGTGCGGCTGCCAGAAACCATCTCTACCGCAGACC | + |
|
Preference number: 3 (lower is better) Translates to: QESSQGRLGTWG*CGCQKPSLPQT Trigger: GGTCTGCGGTAGAGATGGTTTCTGGCAGCCGCAGCAGCCCCAGGTACCTAGCCTCCCCTGGCTGCTCTCCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR GCA 72 bp | ACTGGTGGAGACCAACGACTCCCAGAGGGGTGGGCCTaGTGGGTTAGGAGGCCACTCTGGAGTTGGCCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: TGGDQRLPEGWA*WVRRPLWSWPG Trigger: TCCTGGCCAACTCCAGAGTGGCCTCCTAACCCAGCAGGCCCACCCCTCTGGGAGTCGTTGGTCTCCACCAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR CCA 72 bp | GGTGGAGACCAACGACTCCCAGAGGGGTGGGCCTGCTaGGTTAGGAGGCCACTCTGGAGTTGGCCAGGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: GGDQRLPEGWAC*VRRPLWSWPGE Trigger: TTCTCCTGGCCAACTCCAGAGTGGCCTCCTAACCCAGCAGGCCCACCCCTCTGGGAGTCGTTGGTCTCCACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR TCA 72 bp | GGTGCTGGTCCCTGGGAAGGGTGTGGTAATGATGGATaGGGATTCCTCCAGAGCTGGCCAGAGGAGCACAGG | + |
|
Preference number: 3 (lower is better) Translates to: GAGPWEGCGNDG*GFLQSWPEEHR Trigger: CCTGTGCTCCTCTGGCCAGCTCTGGAGGAATCCTCATCCATCATTACCACACCCTTCCCAGGGACCAGCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR TCA 72 bp | AGGAGTGTCCAACCAGGGTACCAAGTCCCAGGCCTGTaGCCTGGGTTGGATCCATGCTATGGGCAGAAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: RSVQPGYQVPGL*PGLDPCYGQKG Trigger: CCCCTTCTGCCCATAGCATGGATCCAACCCAGGTCACAGGCCTGGGACTTGGTACCCTGGTTGGACACTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR GCA 72 bp | CCCTGTCTTCCAGCCAAGCCGATCCTCAAAGAGATGTaGATCTCTGAGACCGGGGAGGAAAGGTCCTTGGCG | + |
|
Preference number: 3 (lower is better) Translates to: PCLPAKPILKEM*ISETGEERSLA Trigger: CGCCAAGGACCTTTCCTCCCCGGTCTCAGAGATGCACATCTCTTTGAGGATCGGCTTGGCTGGAAGACAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR CCA 72 bp | CCAGAGGGGTGGGCCTGCTGGGTTAGGAGGCCACTCTaGAGTTGGCCAGGAGAATATGAAAGGAAACCCACT | + |
|
Preference number: 3 (lower is better) Translates to: PEGWACWVRRPL*SWPGEYERKPT Trigger: AGTGGGTTTCCTTTCATATTCTCCTGGCCAACTCCAGAGTGGCCTCCTAACCCAGCAGGCCCACCCCTCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR CCA 72 bp | AGTCCCAGGCCTGTGACCTGGGTTGGATCCATGCTATaGGCAGAAGGGGGCTTTGGGAAAGGACAGAACAGG | + |
|
Preference number: 3 (lower is better) Translates to: SPRPVTWVGSML*AEGGFGKGQNR Trigger: CCTGTTCTGTCCTTTCCCAAAGCCCCCTTCTGCCCATAGCATGGATCCAACCCAGGTCACAGGCCTGGGACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR CCA 72 bp | AACCAGGGTACCAAGTCCCAGGCCTGTGACCTGGGTTaGATCCATGCTATGGGCAGAAGGGGGCTTTGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: NQGTKSQACDLG*IHAMGRRGLWE Trigger: TTCCCAAAGCCCCCTTCTGCCCATAGCATGGATCCAACCCAGGTCACAGGCCTGGGACTTGGTACCCTGGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR CCA 72 bp | TGTCCAACCAGGGTACCAAGTCCCAGGCCTGTGACCTaGGTTGGATCCATGCTATGGGCAGAAGGGGGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: CPTRVPSPRPVT*VGSMLWAEGGF Trigger: AAAGCCCCCTTCTGCCCATAGCATGGATCCAACCCAGGTCACAGGCCTGGGACTTGGTACCCTGGTTGGACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR TCA 72 bp | ACCAAGCCAAGCCTGCTCCTTTCAGCTCTGCTAGGCTaGGCATGCTTCCCACATGGTCCCTGTGTCCTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: TKPSLLLSALLG*ACFPHGPCVLC Trigger: ACACAGGACACAGGGACCATGTGGGAAGCATGCTCAGCCTAGCAGAGCTGAAAGGAGCAGGCTTGGCTTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR CCA 72 bp | CCTTTCAGCTCTGCTAGGCTGAGCATGCTTCCCACATaGTCCCTGTGTCCTGTGTGCTTCTGCATGCAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: PFSSARLSMLPT*SLCPVCFCMQV Trigger: CACTTGCATGCAGAAGCACACAGGACACAGGGACCATGTGGGAAGCATGCTCAGCCTAGCAGAGCTGAAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR CCA 72 bp | CTGGGTTGGATCCATGCTATGGGCAGAAGGGGGCTTTaGGAAAGGACAGAACAGGGCGCAGCTTCATTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: LGWIHAMGRRGL*ERTEQGAASFQ Trigger: CTGAAATGAAGCTGCGCCCTGTTCTGTCCTTTCCCAAAGCCCCCTTCTGCCCATAGCATGGATCCAACCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR CCA 72 bp | TCGAACGTGCCTGCCCCTCTTCCACCAGGAGTTAAGTaGAAGCAAGCAGGGTTCTCTCTCCCTAATGCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: SNVPAPLPPGVK*KQAGFSLPNAR Trigger: TCTGGCATTAGGGAGAGAGAACCCTGCTTGCTTCCACTTAACTCCTGGTGGAAGAGGGGCAGGCACGTTCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR CCA 72 bp | GTCTTTGAGGACCACCAGACTAGAGGCACTCCCACCTaGGAGTCTCTGAAGAAAGCCCTCTTACCCCCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: VFEDHQTRGTPT*ESLKKALLPPS Trigger: ACTTGGGGGTAAGAGGGCTTTCTTCAGAGACTCCCAGGTGGGAGTGCCTCTAGTCTGGTGGTCCTCAAAGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR-3UTR CAA 90 bp | CACCAGACTAGAGGCACTCCCACCTGGGAGTCTCTGAAGAAAGCCCTCTTACCCTTGGTAATTAGACGTTaGGCAAACCCAACCTGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: HQTRGTPTWESLKKALLPLVIRR*ANPTCA Trigger: GGCACAGGTTGGGTTTGCCAAACGTCTAATTACCAA...GGGTAAGAGGGCTTTCTTCAGAGACTCCCAGGTGGGAGTGCCTCTAGTCTGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR GCA 72 bp | AGGGAAGGTGACCTCAGAGGCCCATTTAGCTGGCTGTaGTTTCTGGCCCCGATGTCAACACAGATGAAAACT | + |
|
Preference number: 3 (lower is better) Translates to: REGDLRGPFSWL*FLAPMSTQMKT Trigger: AGTTTTCATCTGTGTTGACATCGGGGCCAGAAAGCACAGCCAGCTAAATGGGCCTCTGAGGTCACCTTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR GCA 72 bp | CAAGCAAGCTTGGCACCTGACTCTGGAGTGCAGGCATaGATGAGTGACATGTTTGTGACCCAACTTGGACAG | + |
|
Preference number: 3 (lower is better) Translates to: QASLAPDSGVQA*MSDMFVTQLGQ Trigger: CTGTCCAAGTTGGGTCACAAACATGTCACTCATGCATGCCTGCACTCCAGAGTCAGGTGCCAAGCTTGCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR CCA 72 bp | CTAGCCAGCCAGAGAAGGACTGTTCCCACAGAAGCCTaGTGGCCACGACAAAACTGTTTCATGCTAGCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: LASQRRTVPTEA*WPRQNCFMLAV Trigger: AACAGCTAGCATGAAACAGTTTTGTCGTGGCCACCAGGCTTCTGTGGGAACAGTCCTTCTCTGGCTGGCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR-3UTR CAA 90 bp | GGAGTCTCTGAAGAAAGCCCTCTTACCCCCAAGTGTTTTTATTTAACCTGGGGGGAAGGACAAGCAAGCTaGGCACCTGACTCTGGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: GVSEESPLTPKCFYLTWGEGQAS*APDSGV Trigger: CACTCCAGAGTCAGGTGCCAAGCTTGCTTGTCCTTC...CCCCCAGGTTAAATAAAAACACTTGGGGGTAAGAGGGCTTTCTTCAGAGACTCC 51% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR GCA 72 bp | TTCCCACATGGTCCCTGTGTCCTGTGTGCTTCTGCATaGAAGTGTTTATGGGAACTTGGGGTAAGAAGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: FPHGPCVLCASA*KCLWELGVRRA Trigger: TGCCCTTCTTACCCCAAGTTCCCATAAACACTTGCATGCAGAAGCACACAGGACACAGGGACCATGTGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR CCA 72 bp | AACTCAGGGAGCCCACGGTCTGTAACCACAGCGCACTaGGTGTGTAGGGAGGGAAGTTTCAATAATATTGCA | + |
|
Preference number: 3 (lower is better) Translates to: NSGSPRSVTTAH*VCREGSFNNIA Trigger: TGCAATATTATTGAAACTTCCCTCCCTACACACCCAGTGCGCTGTGGTTACAGACCGTGGGCTCCCTGAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR CCA 72 bp | CCCTGTGTCCTGTGTGCTTCTGCATGCAAGTGTTTATaGGAACTTGGGGTAAGAAGGGCATCGGTCTGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: PCVLCASACKCL*ELGVRRASVCE Trigger: TTCACAGACCGATGCCCTTCTTACCCCAAGTTCCCATAAACACTTGCATGCAGAAGCACACAGGACACAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR-3UTR CAA 90 bp | ACAGGTGATGTCACTATGAGAGTTGGGGATGAGCAGCGCCCAGCTGAGCCTTGGGAAGTTTCAATAATATaGCACTTTGACTGCCCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: TGDVTMRVGDEQRPAEPWEVSII*HFDCPF Trigger: GAAGGGGCAGTCAAAGTGCAATATTATTGAAACTTC...CCAAGGCTCAGCTGGGCGCTGCTCATCCCCAACTCTCATAGTGACATCACCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR TCA 72 bp | CTCAAGAAAAAGGATTCGCTTCGCTTGCAAGATGAATaGGGGAGGGCGTGTCCCAGGGCTTCTAAGAGATCA | + |
|
Preference number: 3 (lower is better) Translates to: LKKKDSLRLQDE*GRACPRASKRS Trigger: TGATCTCTTAGAAGCCCTGGGACACGCCCTCCCTCATTCATCTTGCAAGCGAAGCGAATCCTTTTTCTTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR TCA 72 bp | GTGCTTTCTGGCCCCGATGTCAACACAGATGAAAACTaGACTGAAAGCCAGACTTGGAGTCTCAGGAGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: VLSGPDVNTDEN*TESQTWSLRSV Trigger: GACACTCCTGAGACTCCAAGTCTGGCTTTCAGTTCAGTTTTCATCTGTGTTGACATCGGGGCCAGAAAGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR TCA 72 bp | GACCCAACTTGGACAGTGGATCAGAGGAAAGCGAGCTaGGGTCACACCCAGAGTTTAGGTAGAAATATTCGG | + |
|
Preference number: 3 (lower is better) Translates to: DPTWTVDQRKAS*GHTQSLGRNIR Trigger: CCGAATATTTCTACCTAAACTCTGGGTGTGACCTCAGCTCGCTTTCCTCTGATCCACTGTCCAAGTTGGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR TCA 72 bp | ACCACCAGACTAGAGGCACTCCCACCTGGGAGTCTCTaGAGAAAGCCCTCTTACCCCCAAGTGTTTTTATTT | + |
|
Preference number: 3 (lower is better) Translates to: TTRLEALPPGSL*RKPSYPQVFLF Trigger: AAATAAAAACACTTGGGGGTAAGAGGGCTTTCTTCAGAGACTCCCAGGTGGGAGTGCCTCTAGTCTGGTGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR GCA 72 bp | ATGCTTCCCACATGGTCCCTGTGTCCTGTGTGCTTCTaGATGCAAGTGTTTATGGGAACTTGGGGTAAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: MLPTWSLCPVCF*MQVFMGTWGKK Trigger: CTTCTTACCCCAAGTTCCCATAAACACTTGCATGCAGAAGCACACAGGACACAGGGACCATGTGGGAAGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR GCA 72 bp | TTCTCTCTCCCTAATGCCAGAGAAAGCTACAGGTTCTaGTTCCTGTTGGCTTTGACATGTTCCCATGACTGG | + |
|
Preference number: 3 (lower is better) Translates to: FSLPNARESYRF*FLLALTCSHDW Trigger: CCAGTCATGGGAACATGTCAAAGCCAACAGGAAGCAGAACCTGTAGCTTTCTCTGGCATTAGGGAGAGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR TCA 72 bp | ATACACAGCACATATCCTATTGGTCCACAATTTCTATaGGAACTAAGGTGGCCCCTTCAGCCACCTGAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: IHSTYPIGPQFL*ELRWPLQPPEE Trigger: CTCCTCAGGTGGCTGAAGGGGCCACCTTAGTTCTCATAGAAATTGTGGACCAATAGGATATGTGCTGTGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR TCA 72 bp | TGTCAAAATCTGACCCAGCTCCTCCTGAACATGTTGTaGGTACTGGGTCATTACAGACATTTGGTGAGGCGT | + |
|
Preference number: 3 (lower is better) Translates to: CQNLTQLLLNML*VLGHYRHLVRR Trigger: ACGCCTCACCAAATGTCTGTAATGACCCAGTACTCACAACATGTTCAGGAGGAGCTGGGTCAGATTTTGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR CCA 72 bp | GACATCTCAAGGAACACTTTTGGTCTCTCAGGAAAGTaGAGGAAAAATGAATCCAGAAGCTTCGAACGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: DISRNTFGLSGK*RKNESRSFERA Trigger: GGCACGTTCGAAGCTTCTGGATTCATTTTTCCTCCACTTTCCTGAGAGACCAAAAGTGTTCCTTGAGATGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR TCA 72 bp | TGCTCAGGGAAGGAAGTCACTGTGAAAGACAAATGGTaGCATCTCAAGGAACACTTTTGGTCTCTCAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: CSGKEVTVKDKW*HLKEHFWSLRK Trigger: TTTCCTGAGAGACCAAAAGTGTTCCTTGAGATGTCACCATTTGTCTTTCACAGTGACTTCCTTCCCTGAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR TCA 72 bp | AGAAATAAAAGCGCTTTACTATCTGGACCACCCAGATaGAATGTCATGGCAAATCTTATAAAAACCCAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: RNKSALLSGPPR*NVMANLIKTQR Trigger: CCTCTGGGTTTTTATAAGATTTGCCATGACATTTCATCTGGGTGGTCCAGATAGTAAAGCGCTTTTATTTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR GCA 72 bp | TTTCACTCCACGTCATTGACATATACCAAATACAGATaGATGAAGCTTGGGTCCTACTCTATACCAAAATAC | + |
|
Preference number: 3 (lower is better) Translates to: FHSTSLTYTKYR*MKLGSYSIPKY Trigger: GTATTTTGGTATAGAGTAGGACCCAAGCTTCATGCATCTGTATTTGGTATATGTCAATGACGTGGAGTGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR CCA 72 bp | GTCATTGACATATACCAAATACAGATGCATGAAGCTTaGGTCCTACTCTATACCAAAATACGATATATACAC | + |
|
Preference number: 3 (lower is better) Translates to: VIDIYQIQMHEA*VLLYTKIRYIH Trigger: GTGTATATATCGTATTTTGGTATAGAGTAGGACCCAAGCTTCATGCATCTGTATTTGGTATATGTCAATGAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR GCA 72 bp | TACTCTATACCAAAATACGATATATACACCTCCCACTaGAAAAGGAATCTGATACCTAGTCTTTATACAAAG | + |
|
Preference number: 3 (lower is better) Translates to: YSIPKYDIYTSH*KRNLIPSLYTK Trigger: CTTTGTATAAAGACTAGGTATCAGATTCCTTTTGCAGTGGGAGGTGTATATATCGTATTTTGGTATAGAGTA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| CDS-3UTR TCA 90 bp | GCGCATCCCAGTGACGGCAGCTCACCGGCAGAACTCAGGGAGCCCACGGTCTGTTTGCACACGGGGCCGTaGGCCACCAACATGAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: AHPSDGSSPAELREPTVCLHTGP*ATNMNS Trigger: AGAGTTCATGTTGGTGGCTCACGGCCCCGTGTGCAA...ACAGACCGTGGGCTCCCTGAGTTCTGCCGGTGAGCTGCCGTCACTGGGATGCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| CDS-3UTR TCA 90 bp | GCGCATCCCAGTGACGGCAGCTCACCGGCAGAACTCAGGGAGCCCACGGTCTGTGGTGAAGACAAGGTTTaGAGTGCCGGGAGTGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: AHPSDGSSPAELREPTVCGEDKV*SAGSDG Trigger: GCCATCACTCCCGGCACTTCAAACCTTGTCTTCACC...ACAGACCGTGGGCTCCCTGAGTTCTGCCGGTGAGCTGCCGTCACTGGGATGCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| CDS-3UTR GCA 90 bp | GCGCATCCCAGTGACGGCAGCTCACCGGCAGAACTCAGGGAGCCCACGGTCTGTATGACTGGTCCCCACTaGTACTGCTTCTGCGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: AHPSDGSSPAELREPTVCMTGPH*YCFCGE Trigger: CTCACCGCAGAAGCAGTAGCAGTGGGGACCAGTCAT...ACAGACCGTGGGCTCCCTGAGTTCTGCCGGTGAGCTGCCGTCACTGGGATGCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| CDS-3UTR CCA 90 bp | CCTGGCTTGGTAATTAGACGTTTGGCAAACCCAACCTGTGCCCCTGTTGTCGCAGGCCGCCGCCACCGCTaGAGTAGGACTCGGCGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: PGLVIRRLANPTCAPVVAGRRHR*SRTRRA Trigger: CGCACGCCGAGTCCTACTCCAGCGGTGGCGGCGGCC...TGCGACAACAGGGGCACAGGTTGGGTTTGCCAAACGTCTAATTACCAAGCCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| CDS-3UTR GCA 90 bp | AGAGCCAGGGGCCCCTTATTCCCTCAAGGCCCTGGAGTGCTTAAAGGTGCTGGTGGTCCCCACTGCTACTaGTTCTGCGGTGAGCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RARGPLFPQGPGVLKGAGGPHCY*FCGEPW Trigger: CCAAGGCTCACCGCAGAAGCAGTAGCAGTGGGGACC...ACCAGCACCTTTAAGCACTCCAGGGCCTTGAGGGAATAAGGGGCCCCTGGCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| CDS-3UTR GCA 90 bp | CCTGGCTTGGTAATTAGACGTTTGGCAAACCCAACCTGTGCCCCTGTTGTCGCACAGGAGAGCCGCTGCTaGCCCGGGACGAGGTGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: PGLVIRRLANPTCAPVVAQESRC*PGTRCQ Trigger: TTGACACCTCGTCCCGGGGCAGCAGCGGCTCTCCTG...TGCGACAACAGGGGCACAGGTTGGGTTTGCCAAACGTCTAATTACCAAGCCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| CDS-3UTR GCA 90 bp | CCTGGCTTGGTAATTAGACGTTTGGCAAACCCAACCTGTGCCCCTGTTGTCGCATCTACCCGGAACTTCTaGTGGCCGCCGCCACCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PGLVIRRLANPTCAPVVASTRNF*WPPPPL Trigger: CAGCGGTGGCGGCGGCCAGCAGAAGTTCCGGGTAGA...TGCGACAACAGGGGCACAGGTTGGGTTTGCCAAACGTCTAATTACCAAGCCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| CDS-3UTR CCA 90 bp | AGAGCCAGGGGCCCCTTATTCCCTCAAGGCCCTGGAGTGCTTAAAGGTGCTGGTTGGAGGTCACCACGATaGGGGTGTGCAGAGGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RARGPLFPQGPGVLKGAGWRSPR*GCAEAL Trigger: AAGAGCCTCTGCACACCCCCATCGTGGTGACCTCCA...ACCAGCACCTTTAAGCACTCCAGGGCCTTGAGGGAATAAGGGGCCCCTGGCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| CDS-3UTR GCA 90 bp | GCGTGTCCCAGGGCTTCTAAGAGATCAACCAGTGTCTCACCACTAAGTCCCACCTCCTCGGTCTCCGCCTaGAGCTTCTCTGTCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ACPRASKRSTSVSPLSPTSSVSA*SFSVSS Trigger: GGAGCTGACAGAGAAGCTGCAGGCGGAGACCGAGGA...GGTGGGACTTAGTGGTGAGACACTGGTTGATCTCTTAGAAGCCCTGGGACACGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| CDS-3UTR TCA 90 bp | GCGTGTCCCAGGGCTTCTAAGAGATCAACCAGTGTCTCACCACTAAGTCCCACCCTACTGCTTCTGCGGTaGGCCTTGGAGCAGGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: ACPRASKRSTSVSPLSPTLLLLR*ALEQDS Trigger: AGAGTCCTGCTCCAAGGCTCACCGCAGAAGCAGTAG...GGTGGGACTTAGTGGTGAGACACTGGTTGATCTCTTAGAAGCCCTGGGACACGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| CDS-3UTR GCA 90 bp | CCTGGCTTGGTAATTAGACGTTTGGCAAACCCAACCTGTGCCCCTGTTGTCGCAGCTCATCTCTCCTTCTaGGGCCCACGGTGGTACCGA | + |
|
Preference number: 4 (lower is better) Translates to: PGLVIRRLANPTCAPVVAAHLSF*GPRWYR Trigger: TCGGTACCACCGTGGGCCGCAGAAGGAGAGATGAGC...TGCGACAACAGGGGCACAGGTTGGGTTTGCCAAACGTCTAATTACCAAGCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| CDS-3UTR TCA 90 bp | CCAGACTTGGAGTCTCAGGAGTGTCCAACCAGGGTACCAAGTCCCAGGCCTGTGCGTGAGCCACCAACATaGACTCTAGCTTCTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PDLESQECPTRVPSPRPVREPPT*TLASPS Trigger: AGAAGGAGAAGCTAGAGTTCATGTTGGTGGCTCACG...CACAGGCCTGGGACTTGGTACCCTGGTTGGACACTCCTGAGACTCCAAGTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR CAA 72 bp | CCTGGGTTGGATCCATGCTATGGGCAGAAGGGGGCTTaGGGAAAGGACAGAACAGGGCGCAGCTTCATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PGLDPCYGQKGA*GKDRTGRSFIS Trigger: TGAAATGAAGCTGCGCCCTGTTCTGTCCTTTCCCAAAGCCCCCTTCTGCCCATAGCATGGATCCAACCCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR CAA 72 bp | GCCAGAGAAAGCTACAGGTTCTGCTTCCTGTTGGCTTaGACATGTTCCCATGACTGGCCCCCATGGGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: ARESYRFCFLLA*TCSHDWPPWAH Trigger: GTGTGCCCATGGGGGCCAGTCATGGGAACATGTCAAAGCCAACAGGAAGCAGAACCTGTAGCTTTCTCTGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| CDS-3UTR GCA 90 bp | GGAGTCTCTGAAGAAAGCCCTCTTACCCCCAAGTGTTTTTATTTAACCTGGGGGCTGGGGAGAGCCATGTaGCCAGGGACTGAAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GVSEESPLTPKCFYLTWGLGRAM*PGTEAR Trigger: CCTGGCTTCAGTCCCTGGGCACATGGCTCTCCCCAG...CCCCCAGGTTAAATAAAAACACTTGGGGGTAAGAGGGCTTTCTTCAGAGACTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| CDS-3UTR GCA 90 bp | CCTGGCTTGGTAATTAGACGTTTGGCAAACCCAACCTGTGCCCCTGTTGTCGCATCCTCAGGAGACAGCTaGTCATCTCTCCTTCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: PGLVIRRLANPTCAPVVASSGDS*SSLLLR Trigger: CCGCAGAAGGAGAGATGAGCAGCTGTCTCCTGAGGA...TGCGACAACAGGGGCACAGGTTGGGTTTGCCAAACGTCTAATTACCAAGCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| CDS-3UTR TCA 90 bp | TTGACATGTTCCCATGACTGGCCCCCATGGGCACACTTTGCCTATGAAAGCAGCGATTGGACATGGAGGTaGTCACTGTGGGCTGTACCA | + |
|
Preference number: 4 (lower is better) Translates to: LTCSHDWPPWAHFAYESSDWTWR*SLWAVP Trigger: TGGTACAGCCCACAGTGATCACCTCCATGTCCAATC...GCTGCTTTCATAGGCAAAGTGTGCCCATGGGGGCCAGTCATGGGAACATGTCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| CDS-3UTR CCA 90 bp | CCTGGCTTGGTAATTAGACGTTTGGCAAACCCAACCTGTGCCCCTGTTGTCGCATTGATGACAGAGCGCTaGGTCTTGTCCATCCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PGLVIRRLANPTCAPVVALMTER*VLSIPA Trigger: AGCAGGGATGGACAAGACCCAGCGCTCTGTCATCAA...TGCGACAACAGGGGCACAGGTTGGGTTTGCCAAACGTCTAATTACCAAGCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR CAA 72 bp | CGCACTGGGTGTGTAGGGAGGGAAGTTTCAATAATATaGCACTTTGACTGCCCCTTCGGGACACAGTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RTGCVGREVSII*HFDCPFGTQWV Trigger: CACCCACTGTGTCCCGAAGGGGCAGTCAAAGTGCAATATTATTGAAACTTCCCTCCCTACACACCCAGTGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR CAA 72 bp | CCTAATGCCAGAGAAAGCTACAGGTTCTGCTTCCTGTaGGCTTTGACATGTTCCCATGACTGGCCCCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: PNARESYRFCFL*ALTCSHDWPPW Trigger: CCATGGGGGCCAGTCATGGGAACATGTCAAAGCCAACAGGAAGCAGAACCTGTAGCTTTCTCTGGCATTAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| CDS-3UTR CCA 90 bp | GAGTCATCTGCTTCCCCAGCTCCAGAAATAAAAGCGCTTTACTATCTGGACCACACAGGGCTAGAAGTGTaGGGGAGTTCAAGGAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ESSASPAPEIKALYYLDHTGLEV*GSSRSL Trigger: CAGACTCCTTGAACTCCCCCACACTTCTAGCCCTGT...GTGGTCCAGATAGTAAAGCGCTTTTATTTCTGGAGCTGGGGAAGCAGATGACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR CAA 72 bp | TTTGTTGGCACAAATCCTGGCTTGGTAATTAGACGTTaGGCAAACCCAACCTGTGCCCCTGTTGTCGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: FVGTNPGLVIRR*ANPTCAPVVAL Trigger: GAGTGCGACAACAGGGGCACAGGTTGGGTTTGCCAAACGTCTAATTACCAAGCCAGGATTTGTGCCAACAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| CDS-3UTR CCA 90 bp | TGCATGAAGCTTGGGTCCTACTCTATACCAAAATACGATATATACACCTCCCACATCCACTGCAGGTCCTaGCTGGTGGTGATGGCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: CMKLGSYSIPKYDIYTSHIHCRS*LVVMAL Trigger: CAACGCCATCACCACCAGCCAGGACCTGCAGTGGAT...GTGGGAGGTGTATATATCGTATTTTGGTATAGAGTAGGACCCAAGCTTCATGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| CDS-3UTR CCA 90 bp | GCTCCAGAAATAAAAGCGCTTTACTATCTGGACCACCCAGATGAAATGTCATGGAAGGAGTCTGATGACTaGTCCCCACTGCTACTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: APEIKALYYLDHPDEMSWKESDD*SPLLLL Trigger: AAGCAGTAGCAGTGGGGACCAGTCATCAGACTCCTT...CCATGACATTTCATCTGGGTGGTCCAGATAGTAAAGCGCTTTTATTTCTGGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR CAA 72 bp | CTAGAAACAAGTTCTAACCAGGCTCCACTTCCATACTaGTGTCAACATGCAGTGGGGACAAAGGGAGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LETSSNQAPLPY*CQHAVGTKGEK Trigger: TTTCTCTCCCTTTGTCCCCACTGCATGTTGACACAAGTATGGAAGTGGAGCCTGGTTAGAACTTGTTTCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR CAA 72 bp | CCTCCAGGATCTAATAGCAAATTTCACTCCACGTCATaGACATATACCAAATACAGATGCATGAAGCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PPGSNSKFHSTS*TYTKYRCMKLG Trigger: CCCAAGCTTCATGCATCTGTATTTGGTATATGTCAATGACGTGGAGTGAAATTTGCTATTAGATCCTGGAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR CAA 72 bp | TCCTACCAAGCTTTTCTTAGTGCAAATCCTGTAGGCTaGTGTCACATACAGTACACAGAACAACACATCACA | + |
|
Preference number: 4 (lower is better) Translates to: SYQAFLSANPVG*CHIQYTEQHIT Trigger: TGTGATGTGTTGTTCTGTGTACTGTATGTGACACAAGCCTACAGGATTTGCACTAAGAAAAGCTTGGTAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| 3UTR CAA 72 bp | TGTGAAAGACAAATGGTGACATCTCAAGGAACACTTTaGGTCTCTCAGGAAAGTGGAGGAAAAATGAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: CERQMVTSQGTL*VSQESGGKMNP Trigger: TGGATTCATTTTTCCTCCACTTTCCTGAGAGACCAAAAGTGTTCCTTGAGATGTCACCATTTGTCTTTCACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| CDS GCA 90 bp | CGCCGCCACCGCTGGAGTAGGACTCGGCGTGCGCAGGAGAGCCGCTaGTGCCCCGGGACGAGGTGTCAAAGTTCCCGGGATAATCCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: RRHRWSRTRRAQESR*CPGTRCQSSRDNPG Trigger: ACCAGGATTATCCCGGGAACTTTGACACCTCGTCCCGGGGCAGCAGCGGCTCTCCTGCGCACGCCGAGTCCTACTCCAGCGGTGGCGGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| CDS GCA 90 bp | CGCCACCGCTGGAGTAGGACTCGGCGTGCGCAGGAGAGCCGCTGCTaGCCCGGGACGAGGTGTCAAAGTTCCCGGGATAATCCTGGTACA | + |
|
Preference number: 5 (lower is better) Translates to: RHRWSRTRRAQESRC*PGTRCQSSRDNPGT Trigger: TGTACCAGGATTATCCCGGGAACTTTGACACCTCGTCCCGGGGCAGCAGCGGCTCTCCTGCGCACGCCGAGTCCTACTCCAGCGGTGGCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| CDS TCA 90 bp | GCTGATGGGCTTGATGACAGAGCGCTGGGTCTTGTCCATCCCTGCTaGGGAAGAGGGGCTGTCCTCTTCGGGAGGCTCCTGCTTCACCAC | + |
|
Preference number: 5 (lower is better) Translates to: ADGLDDRALGLVHPC*GRGAVLFGRLLLHH Trigger: GTGGTGAAGCAGGAGCCTCCCGAAGAGGACAGCCCCTCTTCCTCAGCAGGGATGGACAAGACCCAGCGCTCTGTCATCAAGCCCATCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| CDS CCA 90 bp | CCGCCTGCAGCTTCTCTGTCAGCTCCCGGCGACGGTTCCGACACTTaGCTGCAGCTAGCTTGTTTCTCTCCCTCCGGATTCGACGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: PPAASLSAPGDGSDT*LQLACFSPSGFDAS Trigger: AGAAGCGTCGAATCCGGAGGGAGAGAAACAAGCTAGCTGCAGCCAAGTGTCGGAACCGTCGCCGGGAGCTGACAGAGAAGCTGCAGGCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| CDS TCA 90 bp | AGGCGACTCCTGCTCCAGGACATTGGGGTAGGTGAAGACAAGGTTTaGAGTGCCGGGAGTGATGGCAGGCGTGGAGGTCACCACGATGGG | + |
|
Preference number: 5 (lower is better) Translates to: RRLLLQDIGVGEDKV*SAGSDGRRGGHHDG Trigger: CCCATCGTGGTGACCTCCACGCCTGCCATCACTCCCGGCACTTCAAACCTTGTCTTCACCTACCCCAATGTCCTGGAGCAGGAGTCGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| CDS TCA 90 bp | TTCAAGGAGTCTGATGACTGGTCCCCACTGCTACTGCTTCTGCGGTaGGCCTTGGAGCAGGACTCTGAGGGCGACGAAGGCGACTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: FKESDDWSPLLLLLR*ALEQDSEGDEGDSC Trigger: GCAGGAGTCGCCTTCGTCGCCCTCAGAGTCCTGCTCCAAGGCTCACCGCAGAAGCAGTAGCAGTGGGGACCAGTCATCAGACTCCTTGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| CDS GCA 90 bp | GTGTGGGGGAGTTCAAGGAGTCTGATGACTGGTCCCCACTGCTACTaGTTCTGCGGTGAGCCTTGGAGCAGGACTCTGAGGGCGACGAAG | + |
|
Preference number: 5 (lower is better) Translates to: VWGSSRSLMTGPHCY*FCGEPWSRTLRATK Trigger: CTTCGTCGCCCTCAGAGTCCTGCTCCAAGGCTCACCGCAGAAGCAGTAGCAGTGGGGACCAGTCATCAGACTCCTTGAACTCCCCCACAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| CDS-3UTR CAA 90 bp | CCAGACTTGGAGTCTCAGGAGTGTCCAACCAGGGTACCAAGTCCCAGGCCTGTGGCGATGCTGATGGGCTaGATGACAGAGCGCTGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: PDLESQECPTRVPSPRPVAMLMG*MTERWV Trigger: GACCCAGCGCTCTGTCATCAAGCCCATCAGCATCGC...CACAGGCCTGGGACTTGGTACCCTGGTTGGACACTCCTGAGACTCCAAGTCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| CDS GCA 90 bp | CTAGAAGTGTGGGGGAGTTCAAGGAGTCTGATGACTGGTCCCCACTaGTACTGCTTCTGCGGTGAGCCTTGGAGCAGGACTCTGAGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: LEVWGSSRSLMTGPH*YCFCGEPWSRTLRA Trigger: CGCCCTCAGAGTCCTGCTCCAAGGCTCACCGCAGAAGCAGTAGCAGTGGGGACCAGTCATCAGACTCCTTGAACTCCCCCACACTTCTAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| CDS-3UTR CAA 90 bp | TTGACATGTTCCCATGACTGGCCCCCATGGGCACACTTTGCCTATGAAAGCAGCCGACGGTTCCGACACTaGGCTGCAGCTAGCTTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LTCSHDWPPWAHFAYESSRRFRH*AAASLF Trigger: AAACAAGCTAGCTGCAGCCAAGTGTCGGAACCGTCG...GCTGCTTTCATAGGCAAAGTGTGCCCATGGGGGCCAGTCATGGGAACATGTCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| CDS-3UTR CAA 90 bp | TGGGTTAGGAGGCCACTCTGGAGTTGGCCAGGAGAATATGAAAGGAAACCCACTTTGGCTGCAGCTAGCTaGTTTCTCTCCCTCCGGATT | + |
|
Preference number: 5 (lower is better) Translates to: WVRRPLWSWPGEYERKPTLAAAS*FLSLRI Trigger: AATCCGGAGGGAGAGAAACAAGCTAGCTGCAGCCAA...AGTGGGTTTCCTTTCATATTCTCCTGGCCAACTCCAGAGTGGCCTCCTAACCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| CDS-3UTR CAA 90 bp | GGAGTCTCTGAAGAAAGCCCTCTTACCCCCAAGTGTTTTTATTTAACCTGGGGGACAGAGCGCTGGGTCTaGTCCATCCCTGCTGAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: GVSEESPLTPKCFYLTWGTERWV*SIPAEE Trigger: TTCCTCAGCAGGGATGGACAAGACCCAGCGCTCTGT...CCCCCAGGTTAAATAAAAACACTTGGGGGTAAGAGGGCTTTCTTCAGAGACTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| CDS GCA 72 bp | CGCTGGAGTAGGACTCGGCGTGCGCAGGAGAGCCGCTaGTGCCCCGGGACGAGGTGTCAAAGTTCCCGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: RWSRTRRAQESR*CPGTRCQSSRD Trigger: ATCCCGGGAACTTTGACACCTCGTCCCGGGGCAGCAGCGGCTCTCCTGCGCACGCCGAGTCCTACTCCAGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| CDS CCA 72 bp | TATCTACCCGGAACTTCTGCTGGCCGCCGCCACCGCTaGAGTAGGACTCGGCGTGCGCAGGAGAGCCGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: YLPGTSAGRRHR*SRTRRAQESRC Trigger: GCAGCGGCTCTCCTGCGCACGCCGAGTCCTACTCCAGCGGTGGCGGCGGCCAGCAGAAGTTCCGGGTAGATA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| CDS GCA 72 bp | GCTGAGGAAGAGGGGCTGTCCTCTTCGGGAGGCTCCTaGTTCACCACCACGGGGCCAACGGCACTGCCCGTA | + |
|
Preference number: 6 (lower is better) Translates to: AEEEGLSSSGGS*FTTTGPTALPV Trigger: TACGGGCAGTGCCGTTGGCCCCGTGGTGGTGAAGCAGGAGCCTCCCGAAGAGGACAGCCCCTCTTCCTCAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| CDS GCA 72 bp | TGGAGTAGGACTCGGCGTGCGCAGGAGAGCCGCTGCTaGCCCGGGACGAGGTGTCAAAGTTCCCGGGATAAT | + |
|
Preference number: 6 (lower is better) Translates to: WSRTRRAQESRC*PGTRCQSSRDN Trigger: ATTATCCCGGGAACTTTGACACCTCGTCCCGGGGCAGCAGCGGCTCTCCTGCGCACGCCGAGTCCTACTCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| CDS TCA 72 bp | CTCTCCTTCTGCGGCCCACGGTGGTACCGATGGTCTTaGTCACTCCAGGTCTGGGGAGAGCCATGTGCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LSFCGPRWYRWS*SLQVWGEPCAQ Trigger: CTGGGCACATGGCTCTCCCCAGACCTGGAGTGATCAAGACCATCGGTACCACCGTGGGCCGCAGAAGGAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| CDS TCA 72 bp | CTTGATGACAGAGCGCTGGGTCTTGTCCATCCCTGCTaGGGAAGAGGGGCTGTCCTCTTCGGGAGGCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LDDRALGLVHPC*GRGAVLFGRLL Trigger: CAGGAGCCTCCCGAAGAGGACAGCCCCTCTTCCTCAGCAGGGATGGACAAGACCCAGCGCTCTGTCATCAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| CDS TCA 72 bp | GCTACTGCTTCTGCGGTGAGCCTTGGAGCAGGACTCTaGGGGCGACGAAGGCGACTCCTGCTCCAGGACATT | + |
|
Preference number: 6 (lower is better) Translates to: ATASAVSLGAGL*GRRRRLLLQDI Trigger: AATGTCCTGGAGCAGGAGTCGCCTTCGTCGCCCTCAGAGTCCTGCTCCAAGGCTCACCGCAGAAGCAGTAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| CDS TCA 72 bp | TCTGATGACTGGTCCCCACTGCTACTGCTTCTGCGGTaGGCCTTGGAGCAGGACTCTGAGGGCGACGAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: SDDWSPLLLLLR*ALEQDSEGDEG Trigger: GCCTTCGTCGCCCTCAGAGTCCTGCTCCAAGGCTCACCGCAGAAGCAGTAGCAGTGGGGACCAGTCATCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| CDS CAA 72 bp | TCTCTCCTTCTGCGGCCCACGGTGGTACCGATGGTCTaGATCACTCCAGGTCTGGGGAGAGCCATGTGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: SLLLRPTVVPMV*ITPGLGRAMCP Trigger: TGGGCACATGGCTCTCCCCAGACCTGGAGTGATCAAGACCATCGGTACCACCGTGGGCCGCAGAAGGAGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| CDS CCA 72 bp | GCTTCTCTGTCAGCTCCCGGCGACGGTTCCGACACTTaGCTGCAGCTAGCTTGTTTCTCTCCCTCCGGATTC | + |
|
Preference number: 6 (lower is better) Translates to: ASLSAPGDGSDT*LQLACFSPSGF Trigger: GAATCCGGAGGGAGAGAAACAAGCTAGCTGCAGCCAAGTGTCGGAACCGTCGCCGGGAGCTGACAGAGAAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| CDS TCA 72 bp | CTGCTCCAGGACATTGGGGTAGGTGAAGACAAGGTTTaGAGTGCCGGGAGTGATGGCAGGCGTGGAGGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: LLQDIGVGEDKV*SAGSDGRRGGH Trigger: GTGACCTCCACGCCTGCCATCACTCCCGGCACTTCAAACCTTGTCTTCACCTACCCCAATGTCCTGGAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| CDS GCA 72 bp | TGGGGGAGTTCAAGGAGTCTGATGACTGGTCCCCACTaGTACTGCTTCTGCGGTGAGCCTTGGAGCAGGACT | + |
|
Preference number: 6 (lower is better) Translates to: WGSSRSLMTGPH*YCFCGEPWSRT Trigger: AGTCCTGCTCCAAGGCTCACCGCAGAAGCAGTAGCAGTGGGGACCAGTCATCAGACTCCTTGAACTCCCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||
| CDS CAA 72 bp | AGCTTCTCTGTCAGCTCCCGGCGACGGTTCCGACACTaGGCTGCAGCTAGCTTGTTTCTCTCCCTCCGGATT | + |
|
Preference number: 6 (lower is better) Translates to: SFSVSSRRRFRH*AAASLFLSLRI Trigger: AATCCGGAGGGAGAGAAACAAGCTAGCTGCAGCCAAGTGTCGGAACCGTCGCCGGGAGCTGACAGAGAAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031017.11 |
||