Pregenerated sensors for FOSL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024912Ensembl transcript IDs: ENSMUST00000025850.7, ENSMUST00000236774.2
Found 34 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | AGTGCAGCTCCGCTCCTCACAGAAGCCCCTGGCGCCTCCTGCGTTGTGCCATTCGGCCTGCTGGATCAATaGGAGAAAGGGGATGGCTTG | + |
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Preference number: 2 (lower is better) Translates to: SAAPLLTEAPGASCVVPFGLLDQ*EKGDGL Trigger: CAAGCCATCCCCTTTCTCCCATTGATCCAGCAGGCC...GAATGGCACAACGCAGGAGGCGCCAGGGGCTTCTGTGAGGAGCGGAGCTGCACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025850.7 |
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| 3UTR-3UTR CCA 90 bp | AGTGCAGCTCCGCTCCTCACAGAAGCCCCTGGCGCCTCCTGCGTTGTGCCATTCAACAGTGAGCAGCTTTaGGGATCCCCTCCAAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: SAAPLLTEAPGASCVVPFNSEQL*GSPPSW Trigger: CCAGCTTGGAGGGGATCCCCAAAGCTGCTCACTGTT...GAATGGCACAACGCAGGAGGCGCCAGGGGCTTCTGTGAGGAGCGGAGCTGCACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025850.7 |
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| 3UTR-3UTR CCA 90 bp | AGTGCAGCTCCGCTCCTCACAGAAGCCCCTGGCGCCTCCTGCGTTGTGCCATTCAGAAAGGGGATGGCTTaGAGTAGCACCAGCAAGGGA | + |
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Preference number: 2 (lower is better) Translates to: SAAPLLTEAPGASCVVPFRKGMA*SSTSKG Trigger: TCCCTTGCTGGTGCTACTCCAAGCCATCCCCTTTCT...GAATGGCACAACGCAGGAGGCGCCAGGGGCTTCTGTGAGGAGCGGAGCTGCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025850.7 |
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| 3UTR-3UTR CCA 90 bp | CCTGGCGCCTCCTGCGTTGTGCCATTCAGGAGGAGCCTGCAGGATGTCCGGTGCAAAGATCTGCTGGTTTaGGGCAAGGGTATGGTCCAG | + |
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Preference number: 2 (lower is better) Translates to: PGASCVVPFRRSLQDVRCKDLLV*GKGMVQ Trigger: CTGGACCATACCCTTGCCCCAAACCAGCAGATCTTT...GCACCGGACATCCTGCAGGCTCCTCCTGAATGGCACAACGCAGGAGGCGCCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025850.7 |
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| 3UTR GCA 72 bp | GTTGTGCCATTCAGGAGGAGCCTGCAGGATGTCCGGTaGTGCTGGCTGTTGATGCTGTGTGAGTTAGTGTTC | + |
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Preference number: 3 (lower is better) Translates to: VVPFRRSLQDVR*CWLLMLCELVF Trigger: GAACACTAACTCACACAGCATCAACAGCCAGCAGCACCGGACATCCTGCAGGCTCCTCCTGAATGGCACAAC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025850.7 |
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| CDS-3UTR TCA 90 bp | AGGGAGTGCAGCTCCGCTCCTCACAGAAGCCCCTGGCGCCTCCTGCGTTGTGCCGCCCTAGGGCTCGTATaGCTCCTGGCCGGGGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: RECSSAPHRSPWRLLRCAALGLV*LLAGAE Trigger: CTCAGCCCCGGCCAGGAGTCATACGAGCCCTAGGGC...GGCACAACGCAGGAGGCGCCAGGGGCTTCTGTGAGGAGCGGAGCTGCACTCCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025850.7 |
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| CDS-3UTR GCA 90 bp | AAGCGCTTCTCAGAGCTAGGGAGTGCAGCTCCGCTCCTCACAGAAGCCCCTGGCTCTGCTCGCAGGGCCTaGGACGCACCCCCGGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: KRFSELGSAAPLLTEAPGSARRA*DAPPEV Trigger: CACCTCCGGGGGTGCGTCGCAGGCCCTGCGAGCAGA...GCCAGGGGCTTCTGTGAGGAGCGGAGCTGCACTCCCTAGCTCTGAGAAGCGCTT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025850.7 |
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| CDS-3UTR GCA 90 bp | AGGGAGTGCAGCTCCGCTCCTCACAGAAGCCCCTGGCGCCTCCTGCGTTGTGCCGGCTGCACCATCCAGTaGAGTTCCTGGCTGCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: RECSSAPHRSPWRLLRCAGCTIQ*SSWLLL Trigger: CAGCAGCAGCCAGGAACTGCACTGGATGGTGCAGCC...GGCACAACGCAGGAGGCGCCAGGGGCTTCTGTGAGGAGCGGAGCTGCACTCCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025850.7 |
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| CDS-3UTR GCA 90 bp | TCAGAGCTAGGGAGTGCAGCTCCGCTCCTCACAGAAGCCCCTGGCGCCTCCTGCAGGAGGGGTCGCCACTaGTGCTGCTACTCTTTCGGT | + |
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Preference number: 4 (lower is better) Translates to: SELGSAAPLLTEAPGASCRRGRH*CCYSFG Trigger: ACCGAAAGAGTAGCAGCAGCAGTGGCGACCCCTCCT...GCAGGAGGCGCCAGGGGCTTCTGTGAGGAGCGGAGCTGCACTCCCTAGCTCTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025850.7 |
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| CDS-3UTR TCA 90 bp | CGTTGTGCCATTCAGGAGGAGCCTGCAGGATGTCCGGTGCTGCTGGCTGTTGATCTTCCTCCTCTGGGCTaGTCTGCTCGCAGGGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: RCAIQEEPAGCPVLLAVDLPPLG*SARRAC Trigger: GCAGGCCCTGCGAGCAGATCAGCCCAGAGGAGGAAG...ATCAACAGCCAGCAGCACCGGACATCCTGCAGGCTCCTCCTGAATGGCACAACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025850.7 |
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| CDS-3UTR CCA 90 bp | GAGTGCAGCTCCGCTCCTCACAGAAGCCCCTGGCGCCTCCTGCGTTGTGCCATTGTCGGGGATAGCCAGTaGGTCCCAGGAAATGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: ECSSAPHRSPWRLLRCAIVGDSQ*VPGNEA Trigger: AGCCTCATTTCCTGGGACCCACTGGCTATCCCCGAC...AATGGCACAACGCAGGAGGCGCCAGGGGCTTCTGTGAGGAGCGGAGCTGCACTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025850.7 |
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| CDS-3UTR GCA 90 bp | AGTGCAGCTCCGCTCCTCACAGAAGCCCCTGGCGCCTCCTGCGTTGTGCCATTCGCAGTTCCTGGCTGCTaGTGTCGATGCTTGGCACAA | + |
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Preference number: 4 (lower is better) Translates to: SAAPLLTEAPGASCVVPFAVPGC*CRCLAQ Trigger: TTGTGCCAAGCATCGACAGCAGCAGCCAGGAACTGC...GAATGGCACAACGCAGGAGGCGCCAGGGGCTTCTGTGAGGAGCGGAGCTGCACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025850.7 |
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| CDS-3UTR CCA 90 bp | GCTAGGGAGTGCAGCTCCGCTCCTCACAGAAGCCCCTGGCGCCTCCTGCGTTGTGCTGCTGTCGATGCTTaGCACAAGGTGGAACTTCTG | + |
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Preference number: 4 (lower is better) Translates to: ARECSSAPHRSPWRLLRCAAVDA*HKVELL Trigger: CAGAAGTTCCACCTTGTGCCAAGCATCGACAGCAGC...ACAACGCAGGAGGCGCCAGGGGCTTCTGTGAGGAGCGGAGCTGCACTCCCTAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025850.7 |
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| CDS-3UTR CCA 90 bp | TGGTTTGGGGCAAGGGTATGGTCCAGGCCTGCTGGATCAATGGGAGAAAGGGGAATGCTTGGCACAAGGTaGAACTTCTGCTGCTGGGCG | + |
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Preference number: 4 (lower is better) Translates to: WFGARVWSRPAGSMGERGMLGTR*NFCCWA Trigger: CGCCCAGCAGCAGAAGTTCCACCTTGTGCCAAGCAT...TCCCCTTTCTCCCATTGATCCAGCAGGCCTGGACCATACCCTTGCCCCAAACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025850.7 |
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| CDS-3UTR CCA 90 bp | CGTTGTGCCATTCAGGAGGAGCCTGCAGGATGTCCGGTGCTGCTGGCTGTTGATGGAGGAGCAAGGTTCTaGTGTGCTAGGATAGGTGAA | + |
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Preference number: 4 (lower is better) Translates to: RCAIQEEPAGCPVLLAVDGGARF*CARIGE Trigger: TTCACCTATCCTAGCACACCAGAACCTTGCTCCTCC...ATCAACAGCCAGCAGCACCGGACATCCTGCAGGCTCCTCCTGAATGGCACAACG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025850.7 |
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| CDS-3UTR CCA 90 bp | AAAGTCTGGGCTGCCAGGCGTTCTCTGGCAGAGGGAACATATTTTCCTCTAATTGCGCTCTTCCTCCTCTaGGCTGATCTGCTCGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: KVWAARRSLAEGTYFPLIALFLL*ADLLAG Trigger: CCCTGCGAGCAGATCAGCCCAGAGGAGGAAGAGCGC...AATTAGAGGAAAATATGTTCCCTCTGCCAGAGAACGCCTGGCAGCCCAGACTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025850.7 |
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| CDS-3UTR CCA 90 bp | TCAAAGCATAATGTGTTTGTTCTAGTCGGAAGAGATAAAAGATCTGCTGGTTTGGGAGATGCAAGGCACTaGGCGGCCGGGGGCTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: SKHNVFVLVGRDKRSAGLGDARH*AAGGWW Trigger: CCACCAGCCCCCGGCCGCCCAGTGCCTTGCATCTCC...CAAACCAGCAGATCTTTTATCTCTTCCGACTAGAACAAACACATTATGCTTTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025850.7 |
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| CDS-3UTR GCA 90 bp | AGTCTGGGCTGCCAGGCGTTCTCTGGCAGAGGGAACATATTTTCCTCTAATTTTCTCCTTCTGGGATTTTaGAGATGGGGCGATGGGCTT | + |
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Preference number: 4 (lower is better) Translates to: SLGCQAFSGRGNIFSSNFLLLGF*RWGDGL Trigger: AAGCCCATCGCCCCATCTGCAAAATCCCAGAAGGAG...AAAATTAGAGGAAAATATGTTCCCTCTGCCAGAGAACGCCTGGCAGCCCAGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000025850.7 |
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| 3UTR CAA 72 bp | TTTGTTCTAGTCGGAAGAGATAAAAGATCTGCTGGTTaGGGGCAAGGGTATGGTCCAGGCCTGCTGGATCAA | + |
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Preference number: 4 (lower is better) Translates to: FVLVGRDKRSAG*GQGYGPGLLDQ Trigger: TTGATCCAGCAGGCCTGGACCATACCCTTGCCCCAAACCAGCAGATCTTTTATCTCTTCCGACTAGAACAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025850.7 |
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| CDS-3UTR TCA 90 bp | GCTGGCTCTACATCAAAGCATAATGTGTTTGTTCTAGTCGGAAGAGATAAAAGAGTGGGTCCCAGGAAATaGGGCTGCACCATCCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: AGSTSKHNVFVLVGRDKRVGPRK*GCTIQC Trigger: GCACTGGATGGTGCAGCCTCATTTCCTGGGACCCAC...TCTTTTATCTCTTCCGACTAGAACAAACACATTATGCTTTGATGTAGAGCCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025850.7 |
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| CDS-3UTR CCA 90 bp | GCTGGCTCTACATCAAAGCATAATGTGTTTGTTCTAGTCGGAAGAGATAAAAGAATCCAGTGCAGTTCCTaGCTGCTGCTGTCGATGCTT | + |
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Preference number: 4 (lower is better) Translates to: AGSTSKHNVFVLVGRDKRIQCSS*LLLSML Trigger: AAGCATCGACAGCAGCAGCCAGGAACTGCACTGGAT...TCTTTTATCTCTTCCGACTAGAACAAACACATTATGCTTTGATGTAGAGCCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025850.7 |
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| CDS GCA 90 bp | CGCTCGCGTCTCACCCTGCGGCGCTCTTCCTCCTCTGGGCTGATCTaGTCGCAGGGCCTGCGACGCACCCCCGGAGGTGGCCCTAGGGCT | + |
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Preference number: 5 (lower is better) Translates to: RSRLTLRRSSSSGLI*SQGLRRTPGGGPRA Trigger: AGCCCTAGGGCCACCTCCGGGGGTGCGTCGCAGGCCCTGCGAGCAGATCAGCCCAGAGGAGGAAGAGCGCCGCAGGGTGAGACGCGAGCG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025850.7 |
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| CDS-3UTR CAA 90 bp | AGGGAGTGCAGCTCCGCTCCTCACAGAAGCCCCTGGCGCCTCCTGCGTTGTGCCTTAGCAGCTGCTAGCTaGTTCCGCTCGCGTCTCACC | + |
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Preference number: 5 (lower is better) Translates to: RECSSAPHRSPWRLLRCALAAAS*FRSRLT Trigger: GGTGAGACGCGAGCGGAACAAGCTAGCAGCTGCTAA...GGCACAACGCAGGAGGCGCCAGGGGCTTCTGTGAGGAGCGGAGCTGCACTCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025850.7 |
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| CDS-3UTR CAA 90 bp | AGTGCAGCTCCGCTCCTCACAGAAGCCCCTGGCGCCTCCTGCGTTGTGCCATTCCCACCTGGGTCCTTCTaGTCTCCTTCTGGGATTTTG | + |
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Preference number: 5 (lower is better) Translates to: SAAPLLTEAPGASCVVPFPPGSF*SPSGIL Trigger: CAAAATCCCAGAAGGAGACAAGAAGGACCCAGGTGG...GAATGGCACAACGCAGGAGGCGCCAGGGGCTTCTGTGAGGAGCGGAGCTGCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025850.7 |
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| CDS-3UTR CAA 90 bp | GGGGCAAGGGTATGGTCCAGGCCTGCTGGATCAATGGGAGAAAGGGGATGGCTTTTCTCATCCTCCAATTaGTCGGTCTCCGCCTGCAGG | + |
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Preference number: 5 (lower is better) Translates to: GARVWSRPAGSMGERGWLFSSSN*SVSACR Trigger: CCTGCAGGCGGAGACCGACAAATTGGAGGATGAGAA...AAGCCATCCCCTTTCTCCCATTGATCCAGCAGGCCTGGACCATACCCTTGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025850.7 |
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| CDS-3UTR CAA 90 bp | GCTGGCTCTACATCAAAGCATAATGTGTTTGTTCTAGTCGGAAGAGATAAAAGATCTCCTTCTGGGATTTaGCAGATGGGGCGATGGGCT | + |
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Preference number: 5 (lower is better) Translates to: AGSTSKHNVFVLVGRDKRSPSGI*QMGRWA Trigger: AGCCCATCGCCCCATCTGCAAAATCCCAGAAGGAGA...TCTTTTATCTCTTCCGACTAGAACAAACACATTATGCTTTGATGTAGAGCCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025850.7 |
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| CDS-3UTR CAA 90 bp | TCAAAGCATAATGTGTTTGTTCTAGTCGGAAGAGATAAAAGATCTGCTGGTTTGTGCTGCTGTCGATGCTaGGCACAAGGTGGAACTTCT | + |
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Preference number: 5 (lower is better) Translates to: SKHNVFVLVGRDKRSAGLCCCRC*AQGGTS Trigger: AGAAGTTCCACCTTGTGCCAAGCATCGACAGCAGCA...CAAACCAGCAGATCTTTTATCTCTTCCGACTAGAACAAACACATTATGCTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025850.7 |
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| CDS TCA 72 bp | CGCGTCTCACCCTGCGGCGCTCTTCCTCCTCTGGGCTaGTCTGCTCGCAGGGCCTGCGACGCACCCCCGGAG | + |
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Preference number: 6 (lower is better) Translates to: RVSPCGALPPLG*SARRACDAPPE Trigger: CTCCGGGGGTGCGTCGCAGGCCCTGCGAGCAGATCAGCCCAGAGGAGGAAGAGCGCCGCAGGGTGAGACGCG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025850.7 |
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| CDS GCA 72 bp | CTCACCCTGCGGCGCTCTTCCTCCTCTGGGCTGATCTaGTCGCAGGGCCTGCGACGCACCCCCGGAGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: LTLRRSSSSGLI*SQGLRRTPGGG Trigger: GCCACCTCCGGGGGTGCGTCGCAGGCCCTGCGAGCAGATCAGCCCAGAGGAGGAAGAGCGCCGCAGGGTGAG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025850.7 |
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| CDS CCA 72 bp | CCGCTCGCGTCTCACCCTGCGGCGCTCTTCCTCCTCTaGGCTGATCTGCTCGCAGGGCCTGCGACGCACCCC | + |
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Preference number: 6 (lower is better) Translates to: PLASHPAALFLL*ADLLAGPATHP Trigger: GGGGTGCGTCGCAGGCCCTGCGAGCAGATCAGCCCAGAGGAGGAAGAGCGCCGCAGGGTGAGACGCGAGCGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025850.7 |
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| CDS CAA 72 bp | GTGGAACTTCTGCTGCTGGGCGGTCTGTGCCTGAGCTaGCGGGGGCTGCGCGGGGCGACCGTACGGGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: VELLLLGGLCLS*RGLRGATVRAA Trigger: GGCAGCCCGTACGGTCGCCCCGCGCAGCCCCCGCAAGCTCAGGCACAGACCGCCCAGCAGCAGAAGTTCCAC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025850.7 ENSMUST00000236774.2 |
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| CDS GCA 72 bp | GAGAGCCCAGGGGGTCGGAGGAGGGGTCGCCACTGCTaGTGCTACTCTTTCGGTGAGCGGAGGAGCAAGGTT | + |
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Preference number: 6 (lower is better) Translates to: ESPGGRRRGRHC*CYSFGERRSKV Trigger: AACCTTGCTCCTCCGCTCACCGAAAGAGTAGCAGCAGCAGTGGCGACCCCTCCTCCGACCCCCTGGGCTCTC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025850.7 |
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| CDS CCA 72 bp | TGTACTGGGGATAGGCCAGAGGTCGGGGATAGCCAGTaGGTCCCAGGAAATGAGGCTGCACCATCCAGTGCA | + |
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Preference number: 6 (lower is better) Translates to: CTGDRPEVGDSQ*VPGNEAAPSSA Trigger: TGCACTGGATGGTGCAGCCTCATTTCCTGGGACCCACTGGCTATCCCCGACCTCTGGCCTATCCCCAGTACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025850.7 |
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| CDS CAA 72 bp | TCCTTTCTTCGGTTTCTGCACTTAGCAGCTGCTAGCTaGTTCCGCTCGCGTCTCACCCTGCGGCGCTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: SFLRFLHLAAAS*FRSRLTLRRSS Trigger: GGAAGAGCGCCGCAGGGTGAGACGCGAGCGGAACAAGCTAGCAGCTGCTAAGTGCAGAAACCGAAGAAAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025850.7 |
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