Pregenerated sensors for FOS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021250Ensembl transcript IDs: ENSMUST00000021674.7
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGAGGCCAGATGTGGATGCTTGCAAGTCCTTGAGGCCCACAGCCTaGTGTGTTTCACGAACAGGTAAGGTCCTCCCTAGGTCGACGGGA | + |
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Preference number: 1 (lower is better) Translates to: WRPDVDACKSLRPTA*CVSRTGKVLPRSTG Trigger: TCCCGTCGACCTAGGGAGGACCTTACCTGTTCGTGAAACACACCAGGCTGTGGGCCTCAAGGACTTGCAAGCATCCACATCTGGCCTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| 3UTR TCA 90 bp | GAAGAGGTGAGGACTGGAGGCCAGATGTGGATGCTTGCAAGTCCTTaGGGCCCACAGCCTGGTGTGTTTCACGAACAGGTAAGGTCCTCC | + |
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Preference number: 1 (lower is better) Translates to: EEVRTGGQMWMLASP*GPQPGVFHEQVRSS Trigger: GGAGGACCTTACCTGTTCGTGAAACACACCAGGCTGTGGGCCTCAAGGACTTGCAAGCATCCACATCTGGCCTCCAGTCCTCACCTCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| 3UTR GCA 90 bp | TCATGGAAAACTGTTAATGTCAGAACATTCAGACCACCTCGACAATaGATGATCAGTAACATGACAATGAACATTGACGCTGAAGGACTA | + |
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Preference number: 1 (lower is better) Translates to: SWKTVNVRTFRPPRQ*MISNMTMNIDAEGL Trigger: TAGTCCTTCAGCGTCAATGTTCATTGTCATGTTACTGATCATGCATTGTCGAGGTGGTCTGAATGTTCTGACATTAACAGTTTTCCATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| 3UTR-3UTR CCA 90 bp | CTGGAGGCCAGATGTGGATGCTTGCAAGTCCTTGAGGCCCACAGCCTGGTGTGTCACCAGCTCGGGCAGTaGCACGTCTGGATGCCGGCT | + |
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Preference number: 2 (lower is better) Translates to: LEARCGCLQVLEAHSLVCHQLGQ*HVWMPA Trigger: AGCCGGCATCCAGACGTGCCACTGCCCGAGCTGGTG...ACACACCAGGCTGTGGGCCTCAAGGACTTGCAAGCATCCACATCTGGCCTCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| 3UTR CAA 90 bp | GGAAGAGGTGAGGACTGGAGGCCAGATGTGGATGCTTGCAAGTCCTaGAGGCCCACAGCCTGGTGTGTTTCACGAACAGGTAAGGTCCTC | + |
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Preference number: 2 (lower is better) Translates to: GRGEDWRPDVDACKS*RPTAWCVSRTGKVL Trigger: GAGGACCTTACCTGTTCGTGAAACACACCAGGCTGTGGGCCTCAAGGACTTGCAAGCATCCACATCTGGCCTCCAGTCCTCACCTCTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| 3UTR-3UTR TCA 90 bp | CTCACATGCTCTACTAACTACCAGCTCTCAGGTGTCACTAGGAACAACACACTCATGCTTGCAAGTCCTTaGGGCCCACAGCCTGGTGTG | + |
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Preference number: 2 (lower is better) Translates to: LTCSTNYQLSGVTRNNTLMLASP*GPQPGV Trigger: CACACCAGGCTGTGGGCCTCAAGGACTTGCAAGCAT...GAGTGTGTTGTTCCTAGTGACACCTGAGAGCTGGTAGTTAGTAGAGCATGTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| 3UTR-3UTR CCA 90 bp | CAGCACCAGGTTAATTCCAATAATGAACCCAACAGATTAGTTAGTGCTATGAGAGGGCAGTGGCACGTCTaGATGCCGGCTGCCTTGCCT | + |
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Preference number: 2 (lower is better) Translates to: QHQVNSNNEPNRLVSAMRGQWHV*MPAALP Trigger: AGGCAAGGCAGCCGGCATCCAGACGTGCCACTGCCC...TCTCATAGCACTAACTAATCTGTTGGGTTCATTATTGGAATTAACCTGGTGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| 3UTR-3UTR CCA 90 bp | GTTAATGTCAGAACATTCAGACCACCTCGACAATGCATGATCAGTAACATGACAGGAAGAGGTGAGGACTaGAGGCCAGATGTGGATGCT | + |
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Preference number: 2 (lower is better) Translates to: VNVRTFRPPRQCMISNMTGRGED*RPDVDA Trigger: AGCATCCACATCTGGCCTCCAGTCCTCACCTCTTCC...TGTCATGTTACTGATCATGCATTGTCGAGGTGGTCTGAATGTTCTGACATTAAC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| 3UTR-3UTR CCA 90 bp | AATGTCAGAACATTCAGACCACCTCGACAATGCATGATCAGTAACATGACAATGTTGAGGCCCACAGCCTaGTGTGTTTCACGAACAGGT | + |
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Preference number: 2 (lower is better) Translates to: NVRTFRPPRQCMISNMTMLRPTA*CVSRTG Trigger: ACCTGTTCGTGAAACACACCAGGCTGTGGGCCTCAA...CATTGTCATGTTACTGATCATGCATTGTCGAGGTGGTCTGAATGTTCTGACATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| 3UTR TCA 72 bp | AGGACTGGAGGCCAGATGTGGATGCTTGCAAGTCCTTaGGGCCCACAGCCTGGTGTGTTTCACGAACAGGTA | + |
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Preference number: 3 (lower is better) Translates to: RTGGQMWMLASP*GPQPGVFHEQV Trigger: TACCTGTTCGTGAAACACACCAGGCTGTGGGCCTCAAGGACTTGCAAGCATCCACATCTGGCCTCCAGTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| 3UTR CCA 72 bp | GATGTGGATGCTTGCAAGTCCTTGAGGCCCACAGCCTaGTGTGTTTCACGAACAGGTAAGGTCCTCCCTAGG | + |
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Preference number: 3 (lower is better) Translates to: DVDACKSLRPTA*CVSRTGKVLPR Trigger: CCTAGGGAGGACCTTACCTGTTCGTGAAACACACCAGGCTGTGGGCCTCAAGGACTTGCAAGCATCCACATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| 3UTR CCA 72 bp | TTTTGTTTTTGCTACATCTCTGGAAGAGGTGAGGACTaGAGGCCAGATGTGGATGCTTGCAAGTCCTTGAGG | + |
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Preference number: 3 (lower is better) Translates to: FCFCYISGRGED*RPDVDACKSLR Trigger: CCTCAAGGACTTGCAAGCATCCACATCTGGCCTCCAGTCCTCACCTCTTCCAGAGATGTAGCAAAAACAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| 3UTR-3UTR CAA 90 bp | GTTAATGTCAGAACATTCAGACCACCTCGACAATGCATGATCAGTAACATGACAGCCAGATGTGGATGCTaGCAAGTCCTTGAGGCCCAC | + |
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Preference number: 3 (lower is better) Translates to: VNVRTFRPPRQCMISNMTARCGC*QVLEAH Trigger: GTGGGCCTCAAGGACTTGCAAGCATCCACATCTGGC...TGTCATGTTACTGATCATGCATTGTCGAGGTGGTCTGAATGTTCTGACATTAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| 3UTR-3UTR CAA 90 bp | ACAATCCAGCACCAGGTTAATTCCAATAATGAACCCAACAGATTAGTTAGTGCTGATGCTTGCAAGTCCTaGAGGCCCACAGCCTGGTGT | + |
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Preference number: 3 (lower is better) Translates to: TIQHQVNSNNEPNRLVSADACKS*RPTAWC Trigger: ACACCAGGCTGTGGGCCTCAAGGACTTGCAAGCATC...AGCACTAACTAATCTGTTGGGTTCATTATTGGAATTAACCTGGTGCTGGATTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| 3UTR GCA 72 bp | ACTGTTAATGTCAGAACATTCAGACCACCTCGACAATaGATGATCAGTAACATGACAATGAACATTGACGCT | + |
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Preference number: 3 (lower is better) Translates to: TVNVRTFRPPRQ*MISNMTMNIDA Trigger: AGCGTCAATGTTCATTGTCATGTTACTGATCATGCATTGTCGAGGTGGTCTGAATGTTCTGACATTAACAGT 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS-3UTR TCA 90 bp | GCCTGGTGTGTTTCACGAACAGGTAAGGTCCTCCCTAGGTCGACGGGAACCTTCGGCCAGCAGCGTGGGTaGGCTCAGGGAGTCGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: AWCVSRTGKVLPRSTGTFGQQRG*AQGVGG Trigger: TCCTCCGACTCCCTGAGCTCACCCACGCTGCTGGCC...GAAGGTTCCCGTCGACCTAGGGAGGACCTTACCTGTTCGTGAAACACACCAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS-3UTR CCA 90 bp | CTGGAGGCCAGATGTGGATGCTTGCAAGTCCTTGAGGCCCACAGCCTGGTGTGTCGCTCTGGTCTGCGATaGGGCCACGGAGGAGACCAG | + |
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Preference number: 4 (lower is better) Translates to: LEARCGCLQVLEAHSLVCRSGLR*GHGGDQ Trigger: CTGGTCTCCTCCGTGGCCCCATCGCAGACCAGAGCG...ACACACCAGGCTGTGGGCCTCAAGGACTTGCAAGCATCCACATCTGGCCTCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS-3UTR GCA 90 bp | GTGTTTCACGAACAGGTAAGGTCCTCCCTAGGTCGACGGGAACCTTCGAGGGAACCGGGGAGGCGCTACTaGAGCGGGAGGATGACGCCT | + |
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Preference number: 4 (lower is better) Translates to: VFHEQVRSSLGRREPSREPGRRY*SGRMTP Trigger: AGGCGTCATCCTCCCGCTGCAGTAGCGCCTCCCCGG...TTCCCTCGAAGGTTCCCGTCGACCTAGGGAGGACCTTACCTGTTCGTGAAACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS-3UTR GCA 90 bp | CTGGAGGCCAGATGTGGATGCTTGCAAGTCCTTGAGGCCCACAGCCTGGTGTGTGGTCATCGGGGATCTTaGAGGCAGGTCGGTGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: LEARCGCLQVLEAHSLVCGHRGS*RQVGGL Trigger: CAGCCCACCGACCTGCCTGCAAGATCCCCGATGACC...ACACACCAGGCTGTGGGCCTCAAGGACTTGCAAGCATCCACATCTGGCCTCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS-3UTR GCA 90 bp | GCCTGGTGTGTTTCACGAACAGGTAAGGTCCTCCCTAGGTCGACGGGAACCTTCAGGAGGGCTCGTTGCTaGTGCTGCCCTTTCGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: AWCVSRTGKVLPRSTGTFRRARC*CCPFGG Trigger: CCCACCGAAAGGGCAGCAGCAGCAACGAGCCCTCCT...GAAGGTTCCCGTCGACCTAGGGAGGACCTTACCTGTTCGTGAAACACACCAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS-3UTR CCA 90 bp | GAACAGGTAAGGTCCTCCCTAGGTCGACGGGAACCTTCGAGGGAAGACGTGTTTCTGCTGCCCTTTCGGTaGGCAGCGGCACAGCTTGGG | + |
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Preference number: 4 (lower is better) Translates to: EQVRSSLGRREPSREDVFLLPFR*AAAQLG Trigger: CCCAAGCTGTGCCGCTGCCCACCGAAAGGGCAGCAG...AAACACGTCTTCCCTCGAAGGTTCCCGTCGACCTAGGGAGGACCTTACCTGTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS-3UTR GCA 90 bp | GCCTGGTGTGTTTCACGAACAGGTAAGGTCCTCCCTAGGTCGACGGGAACCTTCGAGACCAGAGTGGGCTaGACCAGCCACTGCAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: AWCVSRTGKVLPRSTGTFETRVG*TSHCRS Trigger: AGACCTGCAGTGGCTGGTGCAGCCCACTCTGGTCTC...GAAGGTTCCCGTCGACCTAGGGAGGACCTTACCTGTTCGTGAAACACACCAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS-3UTR CCA 90 bp | GTGTTTCACGAACAGGTAAGGTCCTCCCTAGGTCGACGGGAACCTTCGAGGGAAGCAGGTCTGGGCTGGTaGAGATGGCTGTCACCGTGG | + |
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Preference number: 4 (lower is better) Translates to: VFHEQVRSSLGRREPSREAGLGW*RWLSPW Trigger: CCACGGTGACAGCCATCTCCACCAGCCCAGACCTGC...TTCCCTCGAAGGTTCCCGTCGACCTAGGGAGGACCTTACCTGTTCGTGAAACAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS-3UTR GCA 90 bp | TCCTTGAGGCCCACAGCCTGGTGTGTTTCACGAACAGGTAAGGTCCTCCCTAGGCGATGCTCTGCGCTCTaGCTCCTGACACGGTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: SLRPTAWCVSRTGKVLPRRCSAL*LLTRSS Trigger: TGAAGACCGTGTCAGGAGGCAGAGCGCAGAGCATCG...CCTAGGGAGGACCTTACCTGTTCGTGAAACACACCAGGCTGTGGGCCTCAAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS-3UTR GCA 90 bp | GAACAGGTAAGGTCCTCCCTAGGTCGACGGGAACCTTCGAGGGAAGACGTGTTTCTTCTGCCGATGCTCTaGGCTCTGCCTCCTGACACG | + |
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Preference number: 4 (lower is better) Translates to: EQVRSSLGRREPSREDVFLLPML*ALPPDT Trigger: CGTGTCAGGAGGCAGAGCGCAGAGCATCGGCAGAAG...AAACACGTCTTCCCTCGAAGGTTCCCGTCGACCTAGGGAGGACCTTACCTGTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS-3UTR CCA 90 bp | AGATGTGGATGCTTGCAAGTCCTTGAGGCCCACAGCCTGGTGTGTTTCACGAACCCCCAGCAGACTGGGTaGGGAGTCCGTAAGGATGGG | + |
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Preference number: 4 (lower is better) Translates to: RCGCLQVLEAHSLVCFTNPQQTG*GVRKDG Trigger: CCCATCCTTACGGACTCCCCACCCAGTCTGCTGGGG...GTTCGTGAAACACACCAGGCTGTGGGCCTCAAGGACTTGCAAGCATCCACATCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS-3UTR CCA 90 bp | AGATGTGGATGCTTGCAAGTCCTTGAGGCCCACAGCCTGGTGTGTTTCACGAACGGCAGCGGCACAGCTTaGGAAGGAGTCAGCTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: RCGCLQVLEAHSLVCFTNGSGTA*EGVSFR Trigger: CCTGAAGCTGACTCCTTCCCAAGCTGTGCCGCTGCC...GTTCGTGAAACACACCAGGCTGTGGGCCTCAAGGACTTGCAAGCATCCACATCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS-3UTR GCA 90 bp | GAAAAGAGACACAGACCAGGCCTTGACTCACATGCTCTACTAACTACCAGCTCTGGCTGCACCAGCCACTaGAGGTCTGGGCTGGTGGAG | + |
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Preference number: 4 (lower is better) Translates to: EKRHRPGLDSHALLTTSSGCTSH*RSGLVE Trigger: CTCCACCAGCCCAGACCTGCAGTGGCTGGTGCAGCC...AGAGCTGGTAGTTAGTAGAGCATGTGAGTCAAGGCCTGGTCTGTGTCTCTTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS-3UTR GCA 90 bp | GTGTTTCACGAACAGGTAAGGTCCTCCCTAGGTCGACGGGAACCTTCGAGGGAACCCAAGGAATTGCTGTaGAGAGGCTCCCAGTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: VFHEQVRSSLGRREPSREPKELL*RGSQSA Trigger: AGCAGACTGGGAGCCTCTGCACAGCAATTCCTTGGG...TTCCCTCGAAGGTTCCCGTCGACCTAGGGAGGACCTTACCTGTTCGTGAAACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS-3UTR GCA 90 bp | GTGTTTCACGAACAGGTAAGGTCCTCCCTAGGTCGACGGGAACCTTCGAGGGAACCATCCCCAAGGAATTaGTGTGCAGAGGCTCCCAGT | + |
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Preference number: 4 (lower is better) Translates to: VFHEQVRSSLGRREPSREPSPRN*CAEAPS Trigger: ACTGGGAGCCTCTGCACAGCAATTCCTTGGGGATGG...TTCCCTCGAAGGTTCCCGTCGACCTAGGGAGGACCTTACCTGTTCGTGAAACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS-3UTR GCA 90 bp | CTCACATGCTCTACTAACTACCAGCTCTCAGGTGTCACTAGGAACAACACACTCGCTCGTTGCTGCTGCTaGCCTTTCGGTGGGCAGCGG | + |
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Preference number: 4 (lower is better) Translates to: LTCSTNYQLSGVTRNNTLARCCC*PFGGQR Trigger: CCGCTGCCCACCGAAAGGGCAGCAGCAGCAACGAGC...GAGTGTGTTGTTCCTAGTGACACCTGAGAGCTGGTAGTTAGTAGAGCATGTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS-3UTR GCA 90 bp | GGCCTTGACTCACATGCTCTACTAACTACCAGCTCTCAGGTGTCACTAGGAACAAGGGCTCGTTGCTGCTaGTGCCCTTTCGGTGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: GLDSHALLTTSSQVSLGTRARCC*CPFGGQ Trigger: CTGCCCACCGAAAGGGCAGCAGCAGCAACGAGCCCT...TGTTCCTAGTGACACCTGAGAGCTGGTAGTTAGTAGAGCATGTGAGTCAAGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS-3UTR GCA 90 bp | TTGAGGCCCACAGCCTGGTGTGTTTCACGAACAGGTAAGGTCCTCCCTAGGTCGGGCAGGTCGGTGGGCTaGCAAAATAAACTCCAGTTT | + |
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Preference number: 4 (lower is better) Translates to: LRPTAWCVSRTGKVLPRSGRSVG*QNKLQF Trigger: AAACTGGAGTTTATTTTGGCAGCCCACCGACCTGCC...CGACCTAGGGAGGACCTTACCTGTTCGTGAAACACACCAGGCTGTGGGCCTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS-3UTR GCA 90 bp | AGATGTGGATGCTTGCAAGTCCTTGAGGCCCACAGCCTGGTGTGTTTCACGAACCAGAGGCTCCCAGTCTaGTGCATAGAAGGAACCGGA | + |
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Preference number: 4 (lower is better) Translates to: RCGCLQVLEAHSLVCFTNQRLPV*CIEGTG Trigger: TCCGGTTCCTTCTATGCAGCAGACTGGGAGCCTCTG...GTTCGTGAAACACACCAGGCTGTGGGCCTCAAGGACTTGCAAGCATCCACATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS-3UTR GCA 90 bp | CTCACATGCTCTACTAACTACCAGCTCTCAGGTGTCACTAGGAACAACACACTCCGGAGGAGGGCTCGTTaGTGCTGCTGCCCTTTCGGT | + |
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Preference number: 4 (lower is better) Translates to: LTCSTNYQLSGVTRNNTLRRRAR*CCCPFG Trigger: ACCGAAAGGGCAGCAGCAGCAACGAGCCCTCCTCCG...GAGTGTGTTGTTCCTAGTGACACCTGAGAGCTGGTAGTTAGTAGAGCATGTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS-3UTR TCA 90 bp | AGATGTGGATGCTTGCAAGTCCTTGAGGCCCACAGCCTGGTGTGTTTCACGAACCAGCTTCAGGGTAGGTaGAGACAAAGGAAGACGTGT | + |
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Preference number: 4 (lower is better) Translates to: RCGCLQVLEAHSLVCFTNQLQGR*RQRKTC Trigger: ACACGTCTTCCTTTGTCTTCACCTACCCTGAAGCTG...GTTCGTGAAACACACCAGGCTGTGGGCCTCAAGGACTTGCAAGCATCCACATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS-3UTR CCA 90 bp | CTCACATGCTCTACTAACTACCAGCTCTCAGGTGTCACTAGGAACAACACACTCGACTGGCTCCAAGGATaGCTTGGGCTCAGGGTCGTT | + |
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Preference number: 4 (lower is better) Translates to: LTCSTNYQLSGVTRNNTLDWLQG*LGLRVV Trigger: AACGACCCTGAGCCCAAGCCATCCTTGGAGCCAGTC...GAGTGTGTTGTTCCTAGTGACACCTGAGAGCTGGTAGTTAGTAGAGCATGTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS-3UTR GCA 90 bp | ACAATCCAGCACCAGGTTAATTCCAATAATGAACCCAACAGATTAGTTAGTGCTTGGGGCGCTCTGGTCTaGGATGGGGCCACGGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: TIQHQVNSNNEPNRLVSAWGALV*DGATEE Trigger: CTCCTCCGTGGCCCCATCGCAGACCAGAGCGCCCCA...AGCACTAACTAATCTGTTGGGTTCATTATTGGAATTAACCTGGTGCTGGATTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS-3UTR GCA 90 bp | AAGTCCTTGAGGCCCACAGCCTGGTGTGTTTCACGAACAGGTAAGGTCCTCCCTTTGGCAATCTCAGTCTaGAACGCAGACTTCTCATCT | + |
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Preference number: 4 (lower is better) Translates to: KSLRPTAWCVSRTGKVLPLAISV*NADFSS Trigger: AGATGAGAAGTCTGCGTTGCAGACTGAGATTGCCAA...AGGGAGGACCTTACCTGTTCGTGAAACACACCAGGCTGTGGGCCTCAAGGACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS-3UTR CCA 90 bp | AATGTCAGAACATTCAGACCACCTCGACAATGCATGATCAGTAACATGACAATGAAGGATGGGGCGCTCTaGTCTGCGATGGGGCCACGG | + |
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Preference number: 4 (lower is better) Translates to: NVRTFRPPRQCMISNMTMKDGAL*SAMGPR Trigger: CCGTGGCCCCATCGCAGACCAGAGCGCCCCATCCTT...CATTGTCATGTTACTGATCATGCATTGTCGAGGTGGTCTGAATGTTCTGACATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS-3UTR TCA 90 bp | GTTAATGTCAGAACATTCAGACCACCTCGACAATGCATGATCAGTAACATGACAACTGCAGCGGGAGGATaGCGCCTCGTAGTCGGCGTT | + |
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Preference number: 4 (lower is better) Translates to: VNVRTFRPPRQCMISNMTTAAGG*RLVVGV Trigger: AACGCCGACTACGAGGCGTCATCCTCCCGCTGCAGT...TGTCATGTTACTGATCATGCATTGTCGAGGTGGTCTGAATGTTCTGACATTAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS-3UTR TCA 90 bp | GAAAAGAGACACAGACCAGGCCTTGACTCACATGCTCTACTAACTACCAGCTCTAAAAGTCCTGTGTGTTaGCAGGAGAGCCCATGCTGG | + |
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Preference number: 4 (lower is better) Translates to: EKRHRPGLDSHALLTTSSKSPVC*QESPCW Trigger: CCAGCATGGGCTCTCCTGTCAACACACAGGACTTTT...AGAGCTGGTAGTTAGTAGAGCATGTGAGTCAAGGCCTGGTCTGTGTCTCTTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS-3UTR TCA 90 bp | GTTAATGTCAGAACATTCAGACCACCTCGACAATGCATGATCAGTAACATGACAAGCCCGGAGTACAGGTaGCCACGGGAGTACACAGGG | + |
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Preference number: 4 (lower is better) Translates to: VNVRTFRPPRQCMISNMTSPEYR*PREYTG Trigger: CCCTGTGTACTCCCGTGGTCACCTGTACTCCGGGCT...TGTCATGTTACTGATCATGCATTGTCGAGGTGGTCTGAATGTTCTGACATTAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS-3UTR GCA 90 bp | GGCCTTGACTCACATGCTCTACTAACTACCAGCTCTCAGGTGTCACTAGGAACAGTCATCAAAGGGTTCTaGCTTCAGCTCCACGTTGCT | + |
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Preference number: 4 (lower is better) Translates to: GLDSHALLTTSSQVSLGTVIKGF*LQLHVA Trigger: AGCAACGTGGAGCTGAAGGCAGAACCCTTTGATGAC...TGTTCCTAGTGACACCTGAGAGCTGGTAGTTAGTAGAGCATGTGAGTCAAGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS-3UTR CCA 90 bp | GAAAAGAGACACAGACCAGGCCTTGACTCACATGCTCTACTAACTACCAGCTCTTTGCAGGCAGGTCGGTaGGCTGCCAAAATAAACTCC | + |
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Preference number: 4 (lower is better) Translates to: EKRHRPGLDSHALLTTSSLQAGR*AAKINS Trigger: GGAGTTTATTTTGGCAGCCCACCGACCTGCCTGCAA...AGAGCTGGTAGTTAGTAGAGCATGTGAGTCAAGGCCTGGTCTGTGTCTCTTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS-3UTR CCA 90 bp | CAGCACCAGGTTAATTCCAATAATGAACCCAACAGATTAGTTAGTGCTATGAGAACTGCAGGTCTGGGCTaGTGGAGATGGCTGTCACCG | + |
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Preference number: 4 (lower is better) Translates to: QHQVNSNNEPNRLVSAMRTAGLG*WRWLSP Trigger: CGGTGACAGCCATCTCCACCAGCCCAGACCTGCAGT...TCTCATAGCACTAACTAATCTGTTGGGTTCATTATTGGAATTAACCTGGTGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS-3UTR TCA 90 bp | CAGCACCAGGTTAATTCCAATAATGAACCCAACAGATTAGTTAGTGCTATGAGAGCCACTGGGCCTAGATaGTGCCGGAAACAAGAAGTC | + |
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Preference number: 4 (lower is better) Translates to: QHQVNSNNEPNRLVSAMRATGPR*CRKQEV Trigger: GACTTCTTGTTTCCGGCATCATCTAGGCCCAGTGGC...TCTCATAGCACTAACTAATCTGTTGGGTTCATTATTGGAATTAACCTGGTGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS-3UTR GCA 90 bp | GTATTGTTAAAATCAGCTGCACTAGATACAATCCAGCACCAGGTTAATTCCAATCTACTTTGCCCCTTCTaGCGATGCTCTGCGCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: VLLKSAALDTIQHQVNSNLLCPF*RCSALC Trigger: GCAGAGCGCAGAGCATCGGCAGAAGGGGCAAAGTAG...ATTGGAATTAACCTGGTGCTGGATTGTATCTAGTGCAGCTGATTTTAACAATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS-3UTR CCA 90 bp | CAGCACCAGGTTAATTCCAATAATGAACCCAACAGATTAGTTAGTGCTATGAGAGCTGATGCTCTTGACTaGCTCCAAGGATGGCTTGGG | + |
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Preference number: 4 (lower is better) Translates to: QHQVNSNNEPNRLVSAMRADALD*LQGWLG Trigger: CCCAAGCCATCCTTGGAGCCAGTCAAGAGCATCAGC...TCTCATAGCACTAACTAATCTGTTGGGTTCATTATTGGAATTAACCTGGTGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS-3UTR GCA 90 bp | ACAATCCAGCACCAGGTTAATTCCAATAATGAACCCAACAGATTAGTTAGTGCTAGAGACGGACAGATCTaGGCAAAAGTCCTGTGTGTT | + |
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Preference number: 4 (lower is better) Translates to: TIQHQVNSNNEPNRLVSARDGQI*AKVLCV Trigger: AACACACAGGACTTTTGCGCAGATCTGTCCGTCTCT...AGCACTAACTAATCTGTTGGGTTCATTATTGGAATTAACCTGGTGCTGGATTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS CCA 90 bp | GTCCTGTGTGTTGACAGGAGAGCCCATGCTGGAGAAGGAGTCGGCTaGGGAATGGTAGTAGGAAAGGCTGTCCCCGGCCGGGGAGGCGCT | + |
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Preference number: 5 (lower is better) Translates to: VLCVDRRAHAGEGVG*GMVVGKAVPGRGGA Trigger: AGCGCCTCCCCGGCCGGGGACAGCCTTTCCTACTACCATTCCCCAGCCGACTCCTTCTCCAGCATGGGCTCTCCTGTCAACACACAGGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS CCA 90 bp | TGCTCTGCGCTCTGCCTCCTGACACGGTCTTCACCATTCCCGCTCTaGCGTAAGCCCCAGCAGACTGGGTGGGGAGTCCGTAAGGATGGG | + |
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Preference number: 5 (lower is better) Translates to: CSALCLLTRSSPFPL*RKPQQTGWGVRKDG Trigger: CCCATCCTTACGGACTCCCCACCCAGTCTGCTGGGGCTTACGCCAGAGCGGGAATGGTGAAGACCGTGTCAGGAGGCAGAGCGCAGAGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS CCA 90 bp | CTCAGGGTCGTTGAGAAGGGGCAGGGTGAAGGCCTCCTCAGACTCTaGGGTGGAAGCCTCAGGCAGACCTCCAGTCAAATCCAGGGAGGC | + |
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Preference number: 5 (lower is better) Translates to: LRVVEKGQGEGLLRL*GGSLRQTSSQIQGG Trigger: GCCTCCCTGGATTTGACTGGAGGTCTGCCTGAGGCTTCCACCCCAGAGTCTGAGGAGGCCTTCACCCTGCCCCTTCTCAACGACCCTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS TCA 90 bp | CTGCTCTACTTTGCCCCTTCTGCCGATGCTCTGCGCTCTGCCTCCTaGCACGGTCTTCACCATTCCCGCTCTGGCGTAAGCCCCAGCAGA | + |
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Preference number: 5 (lower is better) Translates to: LLYFAPSADALRSAS*HGLHHSRSGVSPSR Trigger: TCTGCTGGGGCTTACGCCAGAGCGGGAATGGTGAAGACCGTGTCAGGAGGCAGAGCGCAGAGCATCGGCAGAAGGGGCAAAGTAGAGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS GCA 90 bp | GAGATAGCTGCTCTACTTTGCCCCTTCTGCCGATGCTCTGCGCTCTaGCTCCTGACACGGTCTTCACCATTCCCGCTCTGGCGTAAGCCC | + |
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Preference number: 5 (lower is better) Translates to: EIAALLCPFCRCSAL*LLTRSSPFPLWRKP Trigger: GGGCTTACGCCAGAGCGGGAATGGTGAAGACCGTGTCAGGAGGCAGAGCGCAGAGCATCGGCAGAAGGGGCAAAGTAGAGCAGCTATCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS CCA 90 bp | TGCCTTCAGCTCCACGTTGCTGATGCTCTTGACTGGCTCCAAGGATaGCTTGGGCTCAGGGTCGTTGAGAAGGGGCAGGGTGAAGGCCTC | + |
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Preference number: 5 (lower is better) Translates to: CLQLHVADALDWLQG*LGLRVVEKGQGEGL Trigger: GAGGCCTTCACCCTGCCCCTTCTCAACGACCCTGAGCCCAAGCCATCCTTGGAGCCAGTCAAGAGCATCAGCAACGTGGAGCTGAAGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS CCA 90 bp | GGGCTCGTTGCTGCTGCTGCCCTTTCGGTGGGCAGCGGCACAGCTTaGGAAGGAGTCAGCTTCAGGGTAGGTGAAGACAAAGGAAGACGT | + |
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Preference number: 5 (lower is better) Translates to: GLVAAAALSVGSGTA*EGVSFRVGEDKGRR Trigger: ACGTCTTCCTTTGTCTTCACCTACCCTGAAGCTGACTCCTTCCCAAGCTGTGCCGCTGCCCACCGAAAGGGCAGCAGCAGCAACGAGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS-3UTR CAA 90 bp | GCCTGGTGTGTTTCACGAACAGGTAAGGTCCTCCCTAGGTCGACGGGAACCTTCAGGTCATCGGGGATCTaGCAGGCAGGTCGGTGGGCT | + |
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Preference number: 5 (lower is better) Translates to: AWCVSRTGKVLPRSTGTFRSSGI*QAGRWA Trigger: AGCCCACCGACCTGCCTGCAAGATCCCCGATGACCT...GAAGGTTCCCGTCGACCTAGGGAGGACCTTACCTGTTCGTGAAACACACCAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS GCA 90 bp | TCTTCAGGAGATAGCTGCTCTACTTTGCCCCTTCTGCCGATGCTCTaGGCTCTGCCTCCTGACACGGTCTTCACCATTCCCGCTCTGGCG | + |
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Preference number: 5 (lower is better) Translates to: SSGDSCSTLPLLPML*ALPPDTVFTIPALA Trigger: CGCCAGAGCGGGAATGGTGAAGACCGTGTCAGGAGGCAGAGCGCAGAGCATCGGCAGAAGGGGCAAAGTAGAGCAGCTATCTCCTGAAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS-3UTR CAA 90 bp | GCCTGGTGTGTTTCACGAACAGGTAAGGTCCTCCCTAGGTCGACGGGAACCTTCCCCATCCCCAAGGAATaGCTGTGCAGAGGCTCCCAG | + |
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Preference number: 5 (lower is better) Translates to: AWCVSRTGKVLPRSTGTFPIPKE*LCRGSQ Trigger: CTGGGAGCCTCTGCACAGCAATTCCTTGGGGATGGG...GAAGGTTCCCGTCGACCTAGGGAGGACCTTACCTGTTCGTGAAACACACCAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS GCA 90 bp | CTTCCTCTTCAGGAGATAGCTGCTCTACTTTGCCCCTTCTGCCGATaGTCTGCGCTCTGCCTCCTGACACGGTCTTCACCATTCCCGCTC | + |
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Preference number: 5 (lower is better) Translates to: LPLQEIAALLCPFCR*SALCLLTRSSPFPL Trigger: GAGCGGGAATGGTGAAGACCGTGTCAGGAGGCAGAGCGCAGAGCATCGGCAGAAGGGGCAAAGTAGAGCAGCTATCTCCTGAAGAGGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS-3UTR CAA 90 bp | GCCTGGTGTGTTTCACGAACAGGTAAGGTCCTCCCTAGGTCGACGGGAACCTTCGCCTTCAGCTCCACGTaGCTGATGCTCTTGACTGGC | + |
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Preference number: 5 (lower is better) Translates to: AWCVSRTGKVLPRSTGTFAFSST*LMLLTG Trigger: GCCAGTCAAGAGCATCAGCAACGTGGAGCTGAAGGC...GAAGGTTCCCGTCGACCTAGGGAGGACCTTACCTGTTCGTGAAACACACCAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS CCA 90 bp | ATCAAAGGGTTCTGCCTTCAGCTCCACGTTGCTGATGCTCTTGACTaGCTCCAAGGATGGCTTGGGCTCAGGGTCGTTGAGAAGGGGCAG | + |
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Preference number: 5 (lower is better) Translates to: IKGFCLQLHVADALD*LQGWLGLRVVEKGQ Trigger: CTGCCCCTTCTCAACGACCCTGAGCCCAAGCCATCCTTGGAGCCAGTCAAGAGCATCAGCAACGTGGAGCTGAAGGCAGAACCCTTTGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS-3UTR CAA 90 bp | GAAAAGAGACACAGACCAGGCCTTGACTCACATGCTCTACTAACTACCAGCTCTTCGGAGGAGGGCTCGTaGCTGCTGCTGCCCTTTCGG | + |
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Preference number: 5 (lower is better) Translates to: EKRHRPGLDSHALLTTSSSEEGS*LLLPFR Trigger: CCGAAAGGGCAGCAGCAGCAACGAGCCCTCCTCCGA...AGAGCTGGTAGTTAGTAGAGCATGTGAGTCAAGGCCTGGTCTGTGTCTCTTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS GCA 90 bp | GTTTCTCTTCCTCTTCAGGAGATAGCTGCTCTACTTTGCCCCTTCTaGCGATGCTCTGCGCTCTGCCTCCTGACACGGTCTTCACCATTC | + |
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Preference number: 5 (lower is better) Translates to: VSLPLQEIAALLCPF*RCSALCLLTRSSPF Trigger: GAATGGTGAAGACCGTGTCAGGAGGCAGAGCGCAGAGCATCGGCAGAAGGGGCAAAGTAGAGCAGCTATCTCCTGAAGAGGAAGAGAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS-3UTR CAA 90 bp | GTTAATGTCAGAACATTCAGACCACCTCGACAATGCATGATCAGTAACATGACAGATAGCTGCTCTACTTaGCCCCTTCTGCCGATGCTC | + |
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Preference number: 5 (lower is better) Translates to: VNVRTFRPPRQCMISNMTDSCST*PLLPML Trigger: GAGCATCGGCAGAAGGGGCAAAGTAGAGCAGCTATC...TGTCATGTTACTGATCATGCATTGTCGAGGTGGTCTGAATGTTCTGACATTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS-3UTR CAA 90 bp | CAGCACCAGGTTAATTCCAATAATGAACCCAACAGATTAGTTAGTGCTATGAGATTCTCTTTCAGCAGATaGGCAATCTCAGTCTGCAAC | + |
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Preference number: 5 (lower is better) Translates to: QHQVNSNNEPNRLVSAMRFSFSR*AISVCN Trigger: GTTGCAGACTGAGATTGCCAATCTGCTGAAAGAGAA...TCTCATAGCACTAACTAATCTGTTGGGTTCATTATTGGAATTAACCTGGTGCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS CCA 72 bp | GGGGAGTCCGTAAGGATGGGGCGCTCTGGTCTGCGATaGGGCCACGGAGGAGACCAGAGTGGGCTGCACCAG | + |
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Preference number: 6 (lower is better) Translates to: GESVRMGRSGLR*GHGGDQSGLHQ Trigger: CTGGTGCAGCCCACTCTGGTCTCCTCCGTGGCCCCATCGCAGACCAGAGCGCCCCATCCTTACGGACTCCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS TCA 72 bp | GTCCCCGGCCGGGGAGGCGCTACTGCAGCGGGAGGATaGCGCCTCGTAGTCGGCGTTGAAACCCGAGAACAT | + |
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Preference number: 6 (lower is better) Translates to: VPGRGGATAAGG*RLVVGVETREH Trigger: ATGTTCTCGGGTTTCAACGCCGACTACGAGGCGTCATCCTCCCGCTGCAGTAGCGCCTCCCCGGCCGGGGAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS GCA 72 bp | GTGAGCTCAGGGAGTCGGAGGAGGGCTCGTTGCTGCTaGTGCCCTTTCGGTGGGCAGCGGCACAGCTTGGGA | + |
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Preference number: 6 (lower is better) Translates to: VSSGSRRRARCC*CPFGGQRHSLG Trigger: TCCCAAGCTGTGCCGCTGCCCACCGAAAGGGCAGCAGCAGCAACGAGCCCTCCTCCGACTCCCTGAGCTCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS CCA 72 bp | CCATTCCCGCTCTGGCGTAAGCCCCAGCAGACTGGGTaGGGAGTCCGTAAGGATGGGGCGCTCTGGTCTGCG | + |
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Preference number: 6 (lower is better) Translates to: PFPLWRKPQQTG*GVRKDGALWSA Trigger: CGCAGACCAGAGCGCCCCATCCTTACGGACTCCCCACCCAGTCTGCTGGGGCTTACGCCAGAGCGGGAATGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS CCA 72 bp | CTCTGCCTCCTGACACGGTCTTCACCATTCCCGCTCTaGCGTAAGCCCCAGCAGACTGGGTGGGGAGTCCGT | + |
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Preference number: 6 (lower is better) Translates to: LCLLTRSSPFPL*RKPQQTGWGVR Trigger: ACGGACTCCCCACCCAGTCTGCTGGGGCTTACGCCAGAGCGGGAATGGTGAAGACCGTGTCAGGAGGCAGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS CCA 72 bp | TCGGAGGAGGGCTCGTTGCTGCTGCTGCCCTTTCGGTaGGCAGCGGCACAGCTTGGGAAGGAGTCAGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: SEEGSLLLLPFR*AAAQLGKESAS Trigger: TGAAGCTGACTCCTTCCCAAGCTGTGCCGCTGCCCACCGAAAGGGCAGCAGCAGCAACGAGCCCTCCTCCGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS TCA 72 bp | TTTGCCCCTTCTGCCGATGCTCTGCGCTCTGCCTCCTaGCACGGTCTTCACCATTCCCGCTCTGGCGTAAGC | + |
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Preference number: 6 (lower is better) Translates to: FAPSADALRSAS*HGLHHSRSGVS Trigger: GCTTACGCCAGAGCGGGAATGGTGAAGACCGTGTCAGGAGGCAGAGCGCAGAGCATCGGCAGAAGGGGCAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS GCA 72 bp | GCTCTACTTTGCCCCTTCTGCCGATGCTCTGCGCTCTaGCTCCTGACACGGTCTTCACCATTCCCGCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: ALLCPFCRCSAL*LLTRSSPFPLW Trigger: CCAGAGCGGGAATGGTGAAGACCGTGTCAGGAGGCAGAGCGCAGAGCATCGGCAGAAGGGGCAAAGTAGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS CCA 72 bp | GTTGAGAAGGGGCAGGGTGAAGGCCTCCTCAGACTCTaGGGTGGAAGCCTCAGGCAGACCTCCAGTCAAATC | + |
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Preference number: 6 (lower is better) Translates to: VEKGQGEGLLRL*GGSLRQTSSQI Trigger: GATTTGACTGGAGGTCTGCCTGAGGCTTCCACCCCAGAGTCTGAGGAGGCCTTCACCCTGCCCCTTCTCAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS CCA 72 bp | CTCCACGTTGCTGATGCTCTTGACTGGCTCCAAGGATaGCTTGGGCTCAGGGTCGTTGAGAAGGGGCAGGGT | + |
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Preference number: 6 (lower is better) Translates to: LHVADALDWLQG*LGLRVVEKGQG Trigger: ACCCTGCCCCTTCTCAACGACCCTGAGCCCAAGCCATCCTTGGAGCCAGTCAAGAGCATCAGCAACGTGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS CCA 72 bp | GCTGCTGCTGCCCTTTCGGTGGGCAGCGGCACAGCTTaGGAAGGAGTCAGCTTCAGGGTAGGTGAAGACAAA | + |
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Preference number: 6 (lower is better) Translates to: AAAALSVGSGTA*EGVSFRVGEDK Trigger: TTTGTCTTCACCTACCCTGAAGCTGACTCCTTCCCAAGCTGTGCCGCTGCCCACCGAAAGGGCAGCAGCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS CAA 90 bp | TTCAGCTCCACGTTGCTGATGCTCTTGACTGGCTCCAAGGATGGCTaGGGCTCAGGGTCGTTGAGAAGGGGCAGGGTGAAGGCCTCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: FSSTLLMLLTGSKDG*GSGSLRRGRVKASS Trigger: TGAGGAGGCCTTCACCCTGCCCCTTCTCAACGACCCTGAGCCCAAGCCATCCTTGGAGCCAGTCAAGAGCATCAGCAACGTGGAGCTGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS GCA 72 bp | CAGGAGATAGCTGCTCTACTTTGCCCCTTCTGCCGATaGTCTGCGCTCTGCCTCCTGACACGGTCTTCACCA | + |
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Preference number: 6 (lower is better) Translates to: QEIAALLCPFCR*SALCLLTRSSP Trigger: TGGTGAAGACCGTGTCAGGAGGCAGAGCGCAGAGCATCGGCAGAAGGGGCAAAGTAGAGCAGCTATCTCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS GCA 72 bp | CCTCTTCAGGAGATAGCTGCTCTACTTTGCCCCTTCTaGCGATGCTCTGCGCTCTGCCTCCTGACACGGTCT | + |
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Preference number: 6 (lower is better) Translates to: PLQEIAALLCPF*RCSALCLLTRS Trigger: AGACCGTGTCAGGAGGCAGAGCGCAGAGCATCGGCAGAAGGGGCAAAGTAGAGCAGCTATCTCCTGAAGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS CAA 72 bp | ACGTTGCTGATGCTCTTGACTGGCTCCAAGGATGGCTaGGGCTCAGGGTCGTTGAGAAGGGGCAGGGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: TLLMLLTGSKDG*GSGSLRRGRVK Trigger: CTTCACCCTGCCCCTTCTCAACGACCCTGAGCCCAAGCCATCCTTGGAGCCAGTCAAGAGCATCAGCAACGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS CAA 72 bp | GACATCTCCTCTGGGAAGCCAAGGTCATCGGGGATCTaGCAGGCAGGTCGGTGGGCTGCCAAAATAAACTCC | + |
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Preference number: 6 (lower is better) Translates to: DISSGKPRSSGI*QAGRWAAKINS Trigger: GGAGTTTATTTTGGCAGCCCACCGACCTGCCTGCAAGATCCCCGATGACCTTGGCTTCCCAGAGGAGATGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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| CDS GCA 72 bp | GTTTCTCTTCCTCTTCAGGAGATAGCTGCTCTACTTTaGCCCTTCTGCCGATGCTCTGCGCTCTGCCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: VSLPLQEIAALL*PFCRCSALCLL Trigger: CAGGAGGCAGAGCGCAGAGCATCGGCAGAAGGGGCAAAGTAGAGCAGCTATCTCCTGAAGAGGAAGAGAAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021674.7 |
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