Pregenerated sensors for FOLR2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032725Ensembl transcript IDs: ENSMUST00000094141.7, ENSMUST00000209329.2, ENSMUST00000210598.2, ENSMUST00000211566.2
Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | ATTGTAGAAACCCCAACCCCCAACATGGATCAGGAACTGGATGACAGAGGAGAGGACTTCCTTATTCTTTaGAGAGTTGAACCAGACCAA | + |
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Preference number: 2 (lower is better) Translates to: IVETPTPNMDQELDDRGEDFLIL*RVEPDQ Trigger: TTGGTCTGGTTCAACTCTTCAAAGAATAAGGAAGTC...CTCTCCTCTGTCATCCAGTTCCTGATCCATGTTGGGGGTTGGGGTTTCTACAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094141.7 ENSMUST00000210598.2 |
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| CDS-3UTR TCA 90 bp | GTAGAAACCCCAACCCCCAACATGGATCAGGAACTGGATGACAGAGGAGAGGGGGAGTCTTGGATGAAGTaGCTCTTACAGGCAGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: VETPTPNMDQELDDRGEGESWMK*LLQAGS Trigger: GGAGCCTGCCTGTAAGAGTCACTTCATCCAAGACTC...CCCCTCTCCTCTGTCATCCAGTTCCTGATCCATGTTGGGGGTTGGGGTTTCTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000094141.7 ENSMUST00000210598.2 |
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| CDS-3UTR GCA 90 bp | ATTGTAGAAACCCCAACCCCCAACATGGATCAGGAACTGGATGACAGAGGAGAGGGACTACACTGGTCATaGAGCTTGTCCTCGGGGCCC | + |
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Preference number: 4 (lower is better) Translates to: IVETPTPNMDQELDDRGEGLHWS*SLSSGP Trigger: GGGCCCCGAGGACAAGCTGCATGACCAGTGTAGTCC...CTCTCCTCTGTCATCCAGTTCCTGATCCATGTTGGGGGTTGGGGTTTCTACAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000094141.7 ENSMUST00000210598.2 |
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| CDS-3UTR GCA 90 bp | GTAGAAACCCCAACCCCCAACATGGATCAGGAACTGGATGACAGAGGAGAGGGGCAGTCCCAGCCTTTATaGCAGTCTCTCTTGCAGGTA | + |
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Preference number: 4 (lower is better) Translates to: VETPTPNMDQELDDRGEGQSQPL*QSLLQV Trigger: TACCTGCAAGAGAGACTGGCATAAAGGCTGGGACTG...CCCCTCTCCTCTGTCATCCAGTTCCTGATCCATGTTGGGGGTTGGGGTTTCTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000094141.7 ENSMUST00000210598.2 |
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| CDS-3UTR TCA 90 bp | GTAGAAACCCCAACCCCCAACATGGATCAGGAACTGGATGACAGAGGAGAGGGGCTGGCTGGTGTTGACTaGGCAACAGGCATTTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: VETPTPNMDQELDDRGEGLAGVD*ATGIFL Trigger: AAGAAAAATGCCTGTTGCTCAGTCAACACCAGCCAG...CCCCTCTCCTCTGTCATCCAGTTCCTGATCCATGTTGGGGGTTGGGGTTTCTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000094141.7 ENSMUST00000210598.2 |
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| CDS-3UTR TCA 90 bp | GTAGAAACCCCAACCCCCAACATGGATCAGGAACTGGATGACAGAGGAGAGGGGTCCATCTTGCCACAGTaGTCCCAGTTGAAGTACAGA | + |
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Preference number: 4 (lower is better) Translates to: VETPTPNMDQELDDRGEGSILPQ*SQLKYR Trigger: TCTGTACTTCAACTGGGATCACTGTGGCAAGATGGA...CCCCTCTCCTCTGTCATCCAGTTCCTGATCCATGTTGGGGGTTGGGGTTTCTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000094141.7 ENSMUST00000210598.2 |
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| CDS-3UTR GCA 90 bp | GTAGAAACCCCAACCCCCAACATGGATCAGGAACTGGATGACAGAGGAGAGGGGAAACGTGTGACAGGGTaGTGTGTTTGGGCACTTGTT | + |
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Preference number: 4 (lower is better) Translates to: VETPTPNMDQELDDRGEGKRVTG*CVWALV Trigger: AACAAGTGCCCAAACACAGCACCCTGTCACACGTTT...CCCCTCTCCTCTGTCATCCAGTTCCTGATCCATGTTGGGGGTTGGGGTTTCTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000094141.7 ENSMUST00000210598.2 |
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| CDS-3UTR TCA 90 bp | ATTGTAGAAACCCCAACCCCCAACATGGATCAGGAACTGGATGACAGAGGAGAGGGCCACTGCCTGTTGTaGCCATGTAGACCAAAAGCA | + |
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Preference number: 4 (lower is better) Translates to: IVETPTPNMDQELDDRGEGHCLL*PCRPKA Trigger: TGCTTTTGGTCTACATGGTCACAACAGGCAGTGGCC...CTCTCCTCTGTCATCCAGTTCCTGATCCATGTTGGGGGTTGGGGTTTCTACAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000094141.7 ENSMUST00000210598.2 |
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| CDS-3UTR TCA 90 bp | ATTGTAGAAACCCCAACCCCCAACATGGATCAGGAACTGGATGACAGAGGAGAGGAGTCTTGGATGAAGTaGCTCTTACAGGCAGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: IVETPTPNMDQELDDRGEESWMK*LLQAGS Trigger: GGAGCCTGCCTGTAAGAGTCACTTCATCCAAGACTC...CTCTCCTCTGTCATCCAGTTCCTGATCCATGTTGGGGGTTGGGGTTTCTACAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094141.7 ENSMUST00000210598.2 |
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| CDS-3UTR GCA 90 bp | ATTGTAGAAACCCCAACCCCCAACATGGATCAGGAACTGGATGACAGAGGAGAGCACAAGAAGTACTGCTaGATGGGGCACAGTCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: IVETPTPNMDQELDDRGEHKKYC*MGHSPR Trigger: TCTGGGACTGTGCCCCATGCAGCAGTACTTCTTGTG...CTCTCCTCTGTCATCCAGTTCCTGATCCATGTTGGGGGTTGGGGTTTCTACAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000094141.7 ENSMUST00000210598.2 |
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| CDS-3UTR CCA 90 bp | GTAGAAACCCCAACCCCCAACATGGATCAGGAACTGGATGACAGAGGAGAGGGGGGCATTTTTCTTCCATaGACTACACTGGTCATGCAG | + |
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Preference number: 4 (lower is better) Translates to: VETPTPNMDQELDDRGEGGIFLP*TTLVMQ Trigger: CTGCATGACCAGTGTAGTCCATGGAAGAAAAATGCC...CCCCTCTCCTCTGTCATCCAGTTCCTGATCCATGTTGGGGGTTGGGGTTTCTAC 51% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt. Matches the following 2 transcripts: ENSMUST00000094141.7 ENSMUST00000210598.2 |
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| CDS-3UTR CCA 90 bp | ATTGTAGAAACCCCAACCCCCAACATGGATCAGGAACTGGATGACAGAGGAGAGAGAAGTACTGCTGCATaGGGCACAGTCCCAGATGTC | + |
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Preference number: 4 (lower is better) Translates to: IVETPTPNMDQELDDRGERSTAA*GTVPDV Trigger: GACATCTGGGACTGTGCCCCATGCAGCAGTACTTCT...CTCTCCTCTGTCATCCAGTTCCTGATCCATGTTGGGGGTTGGGGTTTCTACAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094141.7 ENSMUST00000210598.2 |
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| CDS-3UTR GCA 90 bp | ATTGTAGAAACCCCAACCCCCAACATGGATCAGGAACTGGATGACAGAGGAGAGGGTGACAGTCCTCTTTaGATAAGGGCACATCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: IVETPTPNMDQELDDRGEGDSPL*IRAHPG Trigger: TCCTGGATGTGCCCTTATGCAAAGAGGACTGTCACC...CTCTCCTCTGTCATCCAGTTCCTGATCCATGTTGGGGGTTGGGGTTTCTACAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094141.7 ENSMUST00000210598.2 |
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| CDS-3UTR GCA 90 bp | ATTGTAGAAACCCCAACCCCCAACATGGATCAGGAACTGGATGACAGAGGAGAGCAGTCCCAGCCTTTATaGCAGTCTCTCTTGCAGGTA | + |
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Preference number: 4 (lower is better) Translates to: IVETPTPNMDQELDDRGEQSQPL*QSLLQV Trigger: TACCTGCAAGAGAGACTGGCATAAAGGCTGGGACTG...CTCTCCTCTGTCATCCAGTTCCTGATCCATGTTGGGGGTTGGGGTTTCTACAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094141.7 ENSMUST00000210598.2 |
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| CDS-3UTR CCA 90 bp | GGTGGAAGCAGGCTCAAGACTTCCTTATTCTTTGAAGAGTTGAACCAGACCAAGCTCTGGTCCACTTGCTaGATCCAAGGCCCAAGGTTG | + |
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Preference number: 4 (lower is better) Translates to: GGSRLKTSLFFEELNQTKLWSTC*IQGPRL Trigger: CAACCTTGGGCCTTGGATCCAGCAAGTGGACCAGAG...CTTGGTCTGGTTCAACTCTTCAAAGAATAAGGAAGTCTTGAGCCTGCTTCCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094141.7 ENSMUST00000210598.2 |
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| CDS-3UTR TCA 90 bp | GGTGGAAGCAGGCTCAAGACTTCCTTATTCTTTGAAGAGTTGAACCAGACCAAGGGCCACTGCCTGTTGTaGCCATGTAGACCAAAAGCA | + |
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Preference number: 4 (lower is better) Translates to: GGSRLKTSLFFEELNQTKGHCLL*PCRPKA Trigger: TGCTTTTGGTCTACATGGTCACAACAGGCAGTGGCC...CTTGGTCTGGTTCAACTCTTCAAAGAATAAGGAAGTCTTGAGCCTGCTTCCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094141.7 ENSMUST00000210598.2 |
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| CDS-3UTR GCA 90 bp | GGTGGAAGCAGGCTCAAGACTTCCTTATTCTTTGAAGAGTTGAACCAGACCAAGCACAAGAAGTACTGCTaGATGGGGCACAGTCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: GGSRLKTSLFFEELNQTKHKKYC*MGHSPR Trigger: TCTGGGACTGTGCCCCATGCAGCAGTACTTCTTGTG...CTTGGTCTGGTTCAACTCTTCAAAGAATAAGGAAGTCTTGAGCCTGCTTCCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094141.7 ENSMUST00000210598.2 |
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| CDS-3UTR CCA 90 bp | ATTGTAGAAACCCCAACCCCCAACATGGATCAGGAACTGGATGACAGAGGAGAGGACCAAAAGCAAGAGTaGTGTCTGTTTCCAGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: IVETPTPNMDQELDDRGEDQKQE*CLFPGH Trigger: ATGGCCTGGAAACAGACACCACTCTTGCTTTTGGTC...CTCTCCTCTGTCATCCAGTTCCTGATCCATGTTGGGGGTTGGGGTTTCTACAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000094141.7 ENSMUST00000210598.2 |
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| CDS-3UTR GCA 90 bp | GGTGGAAGCAGGCTCAAGACTTCCTTATTCTTTGAAGAGTTGAACCAGACCAAGGGTGACAGTCCTCTTTaGATAAGGGCACATCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: GGSRLKTSLFFEELNQTKGDSPL*IRAHPG Trigger: TCCTGGATGTGCCCTTATGCAAAGAGGACTGTCACC...CTTGGTCTGGTTCAACTCTTCAAAGAATAAGGAAGTCTTGAGCCTGCTTCCACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094141.7 ENSMUST00000210598.2 |
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| CDS-3UTR TCA 90 bp | GGTGGAAGCAGGCTCAAGACTTCCTTATTCTTTGAAGAGTTGAACCAGACCAAGCTGGCTGGTGTTGACTaGGCAACAGGCATTTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: GGSRLKTSLFFEELNQTKLAGVD*ATGIFL Trigger: AAGAAAAATGCCTGTTGCTCAGTCAACACCAGCCAG...CTTGGTCTGGTTCAACTCTTCAAAGAATAAGGAAGTCTTGAGCCTGCTTCCACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094141.7 ENSMUST00000210598.2 |
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| CDS-3UTR GCA 90 bp | GGTGGAAGCAGGCTCAAGACTTCCTTATTCTTTGAAGAGTTGAACCAGACCAAGAAACGTGTGACAGGGTaGTGTGTTTGGGCACTTGTT | + |
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Preference number: 4 (lower is better) Translates to: GGSRLKTSLFFEELNQTKKRVTG*CVWALV Trigger: AACAAGTGCCCAAACACAGCACCCTGTCACACGTTT...CTTGGTCTGGTTCAACTCTTCAAAGAATAAGGAAGTCTTGAGCCTGCTTCCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094141.7 ENSMUST00000210598.2 |
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| CDS-3UTR CCA 90 bp | GGTGGAAGCAGGCTCAAGACTTCCTTATTCTTTGAAGAGTTGAACCAGACCAAGGACCAAAAGCAAGAGTaGTGTCTGTTTCCAGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: GGSRLKTSLFFEELNQTKDQKQE*CLFPGH Trigger: ATGGCCTGGAAACAGACACCACTCTTGCTTTTGGTC...CTTGGTCTGGTTCAACTCTTCAAAGAATAAGGAAGTCTTGAGCCTGCTTCCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094141.7 ENSMUST00000210598.2 |
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| CDS-3UTR CCA 90 bp | GGTGGAAGCAGGCTCAAGACTTCCTTATTCTTTGAAGAGTTGAACCAGACCAAGGGCATTTTTCTTCCATaGACTACACTGGTCATGCAG | + |
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Preference number: 4 (lower is better) Translates to: GGSRLKTSLFFEELNQTKGIFLP*TTLVMQ Trigger: CTGCATGACCAGTGTAGTCCATGGAAGAAAAATGCC...CTTGGTCTGGTTCAACTCTTCAAAGAATAAGGAAGTCTTGAGCCTGCTTCCACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094141.7 ENSMUST00000210598.2 |
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| CDS-3UTR CAA 90 bp | ATTGTAGAAACCCCAACCCCCAACATGGATCAGGAACTGGATGACAGAGGAGAGCCAACTCTGGTCCACTaGCTGGATCCAAGGCCCAAG | + |
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Preference number: 5 (lower is better) Translates to: IVETPTPNMDQELDDRGEPTLVH*LDPRPK Trigger: CTTGGGCCTTGGATCCAGCAAGTGGACCAGAGTTGG...CTCTCCTCTGTCATCCAGTTCCTGATCCATGTTGGGGGTTGGGGTTTCTACAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094141.7 ENSMUST00000210598.2 |
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| CDS TCA 90 bp | CTCAAACGTGTGACAGGGTGCTGTGTTTGGGCACTTGTTAATGCCTaGGGACCAGTCCCAGCCTTTATGCCAGTCTCTCTTGCAGGTAAA | + |
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Preference number: 5 (lower is better) Translates to: LKRVTGCCVWALVNA*GPVPAFMPVSLAGK Trigger: TTTACCTGCAAGAGAGACTGGCATAAAGGCTGGGACTGGTCCTCAGGCATTAACAAGTGCCCAAACACAGCACCCTGTCACACGTTTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094141.7 ENSMUST00000209329.2 ENSMUST00000210598.2 |
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| CDS-3UTR CAA 90 bp | GTAGAAACCCCAACCCCCAACATGGATCAGGAACTGGATGACAGAGGAGAGGGGATACAGGCAGGAGTCTaGGATGAAGTGACTCTTACA | + |
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Preference number: 5 (lower is better) Translates to: VETPTPNMDQELDDRGEGIQAGV*DEVTLT Trigger: TGTAAGAGTCACTTCATCCAAGACTCCTGCCTGTAT...CCCCTCTCCTCTGTCATCCAGTTCCTGATCCATGTTGGGGGTTGGGGTTTCTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000094141.7 ENSMUST00000210598.2 |
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| CDS-3UTR CAA 90 bp | GGTGGAAGCAGGCTCAAGACTTCCTTATTCTTTGAAGAGTTGAACCAGACCAAGCCAACTCTGGTCCACTaGCTGGATCCAAGGCCCAAG | + |
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Preference number: 5 (lower is better) Translates to: GGSRLKTSLFFEELNQTKPTLVH*LDPRPK Trigger: CTTGGGCCTTGGATCCAGCAAGTGGACCAGAGTTGG...CTTGGTCTGGTTCAACTCTTCAAAGAATAAGGAAGTCTTGAGCCTGCTTCCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094141.7 ENSMUST00000210598.2 |
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| CDS-3UTR CAA 90 bp | GGTGGAAGCAGGCTCAAGACTTCCTTATTCTTTGAAGAGTTGAACCAGACCAAGATACAGGCAGGAGTCTaGGATGAAGTGACTCTTACA | + |
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Preference number: 5 (lower is better) Translates to: GGSRLKTSLFFEELNQTKIQAGV*DEVTLT Trigger: TGTAAGAGTCACTTCATCCAAGACTCCTGCCTGTAT...CTTGGTCTGGTTCAACTCTTCAAAGAATAAGGAAGTCTTGAGCCTGCTTCCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094141.7 ENSMUST00000210598.2 |
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| CDS GCA 72 bp | CAGCACTGGGGCCAGGCTGGGCACAAGAAGTACTGCTaGATGGGGCACAGTCCCAGATGTCATAAAGGAAGC | + |
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Preference number: 6 (lower is better) Translates to: QHWGQAGHKKYC*MGHSPRCHKGS Trigger: GCTTCCTTTATGACATCTGGGACTGTGCCCCATGCAGCAGTACTTCTTGTGCCCAGCCTGGCCCCAGTGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094141.7 ENSMUST00000210598.2 |
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| CDS GCA 72 bp | TTCTTCCATGGACTACACTGTGAGAGTGAGTCCCTGTaGTTCCACGGGCCCTGGTCATGCAGCTTGTCCTCG | + |
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Preference number: 6 (lower is better) Translates to: FFHGLHCESESL*FHGPWSCSLSS Trigger: CGAGGACAAGCTGCATGACCAGGGCCCGTGGAAGCACAGGGACTCACTCTCACAGTGTAGTCCATGGAAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211566.2 |
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| CDS CCA 72 bp | GTAGGAGTGACTCCAGAGACCCTCGCAAAGGCTGGCTaGTGTCGGGAAGTAGTACTCAAACGTGTGACAGGG | + |
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Preference number: 6 (lower is better) Translates to: VGVTPETLAKAG*CREVVLKRVTG Trigger: CCCTGTCACACGTTTGAGTACTACTTCCCGACACCAGCCAGCCTTTGCGAGGGTCTCTGGAGTCACTCCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094141.7 ENSMUST00000210598.2 |
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| CDS CAA 72 bp | CCTGAGGACCAGTCCCAGCCTTTATGCCAGTCTCTCTaGCAGGTAAAGGAGGTACGACAGGCTTCCCACCAC | + |
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Preference number: 6 (lower is better) Translates to: PEDQSQPLCQSL*QVKEVRQASHH Trigger: GTGGTGGGAAGCCTGTCGTACCTCCTTTACCTGCAAGAGAGACTGGCATAAAGGCTGGGACTGGTCCTCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094141.7 ENSMUST00000209329.2 ENSMUST00000210598.2 |
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