Pregenerated sensors for FOLH1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001773Ensembl transcript IDs: ENSMUST00000001824.7, ENSMUST00000107271.10
Found 46 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | AATATGATCTTCCCAGCCTTTCGTGGCCAGAGTGTATCTAGTCCCCCAGATGAACAAAGAGGAAGCCAATaGGGAAGGTTCCGGTTAAAG | + |
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Preference number: 4 (lower is better) Translates to: NMIFPAFRGQSVSSPPDEQRGSQ*GRFRLK Trigger: CTTTAACCGGAACCTTCCTCATTGGCTTCCTCTTTG...TTCATCTGGGGGACTAGATACACTCTGGCCACGAAAGGCTGGGAAGATCATATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001824.7 |
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| CDS-3UTR GCA 90 bp | TCAGCTATTGTGGCTAATATGATCTTCCCAGCCTTTCGTGGCCAGAGTGTATCTCCTCAGAGTCTCTGCTaGAGCTTGCACTGTAAAGGT | + |
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Preference number: 4 (lower is better) Translates to: SAIVANMIFPAFRGQSVSPQSLC*SLHCKG Trigger: ACCTTTACAGTGCAAGCTGCAGCAGAGACTCTGAGG...AGATACACTCTGGCCACGAAAGGCTGGGAAGATCATATTAGCCACAATAGCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001824.7 |
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| CDS-3UTR TCA 90 bp | ATTGTGGCTAATATGATCTTCCCAGCCTTTCGTGGCCAGAGTGTATCTAGTCCCTCTTCCCAGAACAACTaGTCTTCATTTCCCGTTCCA | + |
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Preference number: 4 (lower is better) Translates to: IVANMIFPAFRGQSVSSPSSQNN*SSFPVP Trigger: TGGAACGGGAAATGAAGATCAGTTGTTCTGGGAAGA...GGGACTAGATACACTCTGGCCACGAAAGGCTGGGAAGATCATATTAGCCACAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001824.7 |
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| CDS-3UTR GCA 90 bp | ATTGTGGCTAATATGATCTTCCCAGCCTTTCGTGGCCAGAGTGTATCTAGTCCCCAGAATCATTCCTTTTaGCCCTGCCAGTTGAGCATT | + |
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Preference number: 4 (lower is better) Translates to: IVANMIFPAFRGQSVSSPQNHSF*PCQLSI Trigger: AATGCTCAACTGGCAGGGGCAAAAGGAATGATTCTG...GGGACTAGATACACTCTGGCCACGAAAGGCTGGGAAGATCATATTAGCCACAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001824.7 |
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| CDS-3UTR GCA 90 bp | TCAGCTATTGTGGCTAATATGATCTTCCCAGCCTTTCGTGGCCAGAGTGTATCTTTCCCTCAGAGTCTCTaGTGCAGCTTGCACTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: SAIVANMIFPAFRGQSVSFPQSL*CSLHCK Trigger: TTTACAGTGCAAGCTGCAGCAGAGACTCTGAGGGAA...AGATACACTCTGGCCACGAAAGGCTGGGAAGATCATATTAGCCACAATAGCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001824.7 |
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| CDS-3UTR TCA 90 bp | AATATGATCTTCCCAGCCTTTCGTGGCCAGAGTGTATCTAGTCCCCCAGATGAATCCAATGAACTCAGGTaGAGGACTCTTTTCTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: NMIFPAFRGQSVSSPPDESNELR*RTLFFP Trigger: TGGAAAGAAAAGAGTCCTTCACCTGAGTTCATTGGA...TTCATCTGGGGGACTAGATACACTCTGGCCACGAAAGGCTGGGAAGATCATATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001824.7 |
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| CDS-3UTR GCA 90 bp | ATTGTGGCTAATATGATCTTCCCAGCCTTTCGTGGCCAGAGTGTATCTAGTCCCATTATTTTGTGTTCCTaGCAAGTGTGGTGTCCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: IVANMIFPAFRGQSVSSPIILCS*QVWCPC Trigger: ACACGGACACCACACTTGGCAGGAACACAAAATAAT...GGGACTAGATACACTCTGGCCACGAAAGGCTGGGAAGATCATATTAGCCACAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001824.7 |
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| CDS-3UTR GCA 90 bp | AATATGATCTTCCCAGCCTTTCGTGGCCAGAGTGTATCTAGTCCCCCAGATGAAATAAGCATGTTCATTTaGTGGGTAACCTGGTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: NMIFPAFRGQSVSSPPDEISMFI*WVTWCE Trigger: CTCACACCAGGTTACCCAGCAAATGAACATGCTTAT...TTCATCTGGGGGACTAGATACACTCTGGCCACGAAAGGCTGGGAAGATCATATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001824.7 |
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| CDS-3UTR CCA 90 bp | AATATGATCTTCCCAGCCTTTCGTGGCCAGAGTGTATCTAGTCCCCCAGATGAATTCTTCATGCCAGAATaGGAAACATTACCAGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NMIFPAFRGQSVSSPPDEFFMPE*ETLPVA Trigger: AGCTACTGGTAATGTTTCCCATTCTGGCATGAAGAA...TTCATCTGGGGGACTAGATACACTCTGGCCACGAAAGGCTGGGAAGATCATATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001824.7 |
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| CDS-3UTR CCA 90 bp | ATTGTGGCTAATATGATCTTCCCAGCCTTTCGTGGCCAGAGTGTATCTAGTCCCAATAACATATCTGTCTaGTTCCAGAGCTCCTTTGAG | + |
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Preference number: 4 (lower is better) Translates to: IVANMIFPAFRGQSVSSPNNISV*FQSSFE Trigger: CTCAAAGGAGCTCTGGAACCAGACAGATATGTTATT...GGGACTAGATACACTCTGGCCACGAAAGGCTGGGAAGATCATATTAGCCACAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001824.7 |
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| CDS-3UTR CCA 90 bp | AATATGATCTTCCCAGCCTTTCGTGGCCAGAGTGTATCTAGTCCCCCAGATGAATTCAAAACCTTCATCTaGGCTTTGCAGCTCTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: NMIFPAFRGQSVSSPPDEFKTFI*ALQLFC Trigger: ACAAAAGAGCTGCAAAGCCCAGATGAAGGTTTTGAA...TTCATCTGGGGGACTAGATACACTCTGGCCACGAAAGGCTGGGAAGATCATATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001824.7 |
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| CDS-3UTR GCA 90 bp | AATATGATCTTCCCAGCCTTTCGTGGCCAGAGTGTATCTAGTCCCCCAGATGAAAAAACTCCTTCTTCATaGCAGAATGGGAAACATTAC | + |
|
Preference number: 4 (lower is better) Translates to: NMIFPAFRGQSVSSPPDEKTPSS*QNGKHY Trigger: GTAATGTTTCCCATTCTGGCATGAAGAAGGAGTTTT...TTCATCTGGGGGACTAGATACACTCTGGCCACGAAAGGCTGGGAAGATCATATT 43% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000001824.7 |
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| CDS-3UTR GCA 90 bp | TCAGCTATTGTGGCTAATATGATCTTCCCAGCCTTTCGTGGCCAGAGTGTATCTTGTACATCAGTGGTGTaGAATCAACTCTTAGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SAIVANMIFPAFRGQSVSCTSVV*NQLLEC Trigger: ACACTCTAAGAGTTGATTGCACACCACTGATGTACA...AGATACACTCTGGCCACGAAAGGCTGGGAAGATCATATTAGCCACAATAGCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001824.7 |
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| CDS-3UTR CCA 90 bp | AATATGATCTTCCCAGCCTTTCGTGGCCAGAGTGTATCTAGTCCCCCAGATGAATCCAGATACATCAGCTaGTCATTCATAATTCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: NMIFPAFRGQSVSSPPDESRYIS*SFIILS Trigger: ACTGAGAATTATGAATGACCAGCTGATGTATCTGGA...TTCATCTGGGGGACTAGATACACTCTGGCCACGAAAGGCTGGGAAGATCATATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001824.7 |
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| CDS-3UTR GCA 90 bp | GACAGAGTAGATCTGGGAAGGCTGTATTATATTTCTGATAATTGTCTGATACTGCCTCAGAGTCTCTGCTaGAGCTTGCACTGTAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: DRVDLGRLYYISDNCLILPQSLC*SLHCKG Trigger: ACCTTTACAGTGCAAGCTGCAGCAGAGACTCTGAGG...CAGTATCAGACAATTATCAGAAATATAATACAGCCTTCCCAGATCTACTCTGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001824.7 ENSMUST00000107271.10 |
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| CDS-3UTR CCA 90 bp | TCAGCTATTGTGGCTAATATGATCTTCCCAGCCTTTCGTGGCCAGAGTGTATCTAGGATGAGTTTTATTTaGATAGGACAGCAAGACATC | + |
|
Preference number: 4 (lower is better) Translates to: SAIVANMIFPAFRGQSVSRMSFI*IGQQDI Trigger: GATGTCTTGCTGTCCTATCCAAATAAAACTCATCCT...AGATACACTCTGGCCACGAAAGGCTGGGAAGATCATATTAGCCACAATAGCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001824.7 |
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| CDS-3UTR TCA 90 bp | GACAGAGTAGATCTGGGAAGGCTGTATTATATTTCTGATAATTGTCTGATACTGCAAAGAGGAAGCCAATaGGGAAGGTTCCGGTTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: DRVDLGRLYYISDNCLILQRGSQ*GRFRLK Trigger: CTTTAACCGGAACCTTCCTCATTGGCTTCCTCTTTG...CAGTATCAGACAATTATCAGAAATATAATACAGCCTTCCCAGATCTACTCTGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001824.7 ENSMUST00000107271.10 |
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| CDS-3UTR GCA 90 bp | GACAGAGTAGATCTGGGAAGGCTGTATTATATTTCTGATAATTGTCTGATACTGTTCCCTCAGAGTCTCTaGTGCAGCTTGCACTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: DRVDLGRLYYISDNCLILFPQSL*CSLHCK Trigger: TTTACAGTGCAAGCTGCAGCAGAGACTCTGAGGGAA...CAGTATCAGACAATTATCAGAAATATAATACAGCCTTCCCAGATCTACTCTGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001824.7 ENSMUST00000107271.10 |
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| CDS-3UTR TCA 90 bp | GACAGAGTAGATCTGGGAAGGCTGTATTATATTTCTGATAATTGTCTGATACTGTCTTCCCAGAACAACTaGTCTTCATTTCCCGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: DRVDLGRLYYISDNCLILSSQNN*SSFPVP Trigger: TGGAACGGGAAATGAAGATCAGTTGTTCTGGGAAGA...CAGTATCAGACAATTATCAGAAATATAATACAGCCTTCCCAGATCTACTCTGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001824.7 ENSMUST00000107271.10 |
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| CDS-3UTR TCA 90 bp | GACAGAGTAGATCTGGGAAGGCTGTATTATATTTCTGATAATTGTCTGATACTGTGGTGGCACTACATCTaGTATATTCTCATATCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DRVDLGRLYYISDNCLILWWHYI*YILISW Trigger: CCAGGATATGAGAATATATCAGATGTAGTGCCACCA...CAGTATCAGACAATTATCAGAAATATAATACAGCCTTCCCAGATCTACTCTGTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001824.7 ENSMUST00000107271.10 |
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| CDS-3UTR TCA 90 bp | GACAGAGTAGATCTGGGAAGGCTGTATTATATTTCTGATAATTGTCTGATACTGCTTGACCTTTTGTGTTaGAAAGTTTCCAGCAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: DRVDLGRLYYISDNCLILLDLLC*KVSSKA Trigger: GGCTTTGCTGGAAACTTTTCAACACAAAAGGTCAAG...CAGTATCAGACAATTATCAGAAATATAATACAGCCTTCCCAGATCTACTCTGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001824.7 |
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| CDS-3UTR TCA 90 bp | GACAGAGTAGATCTGGGAAGGCTGTATTATATTTCTGATAATTGTCTGATACTGTCCAATGAACTCAGGTaGAGGACTCTTTTCTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: DRVDLGRLYYISDNCLILSNELR*RTLFFP Trigger: TGGAAAGAAAAGAGTCCTTCACCTGAGTTCATTGGA...CAGTATCAGACAATTATCAGAAATATAATACAGCCTTCCCAGATCTACTCTGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001824.7 ENSMUST00000107271.10 |
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| CDS-3UTR GCA 90 bp | GACAGAGTAGATCTGGGAAGGCTGTATTATATTTCTGATAATTGTCTGATACTGATTATTTTGTGTTCCTaGCAAGTGTGGTGTCCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: DRVDLGRLYYISDNCLILIILCS*QVWCPC Trigger: ACACGGACACCACACTTGGCAGGAACACAAAATAAT...CAGTATCAGACAATTATCAGAAATATAATACAGCCTTCCCAGATCTACTCTGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001824.7 ENSMUST00000107271.10 |
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| CDS-3UTR GCA 90 bp | GACAGAGTAGATCTGGGAAGGCTGTATTATATTTCTGATAATTGTCTGATACTGATAAGCATGTTCATTTaGTGGGTAACCTGGTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: DRVDLGRLYYISDNCLILISMFI*WVTWCE Trigger: CTCACACCAGGTTACCCAGCAAATGAACATGCTTAT...CAGTATCAGACAATTATCAGAAATATAATACAGCCTTCCCAGATCTACTCTGTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001824.7 ENSMUST00000107271.10 |
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| CDS-3UTR TCA 90 bp | GACAGAGTAGATCTGGGAAGGCTGTATTATATTTCTGATAATTGTCTGATACTGAACTCTTGCAGTCTCTaGTTGAACTTAGATGCAACA | + |
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Preference number: 4 (lower is better) Translates to: DRVDLGRLYYISDNCLILNSCSL*LNLDAT Trigger: TGTTGCATCTAAGTTCAATCAGAGACTGCAAGAGTT...CAGTATCAGACAATTATCAGAAATATAATACAGCCTTCCCAGATCTACTCTGTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001824.7 ENSMUST00000107271.10 |
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| CDS-3UTR GCA 90 bp | GACAGAGTAGATCTGGGAAGGCTGTATTATATTTCTGATAATTGTCTGATACTGTGTACATCAGTGGTGTaGAATCAACTCTTAGAGTGT | + |
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Preference number: 4 (lower is better) Translates to: DRVDLGRLYYISDNCLILCTSVV*NQLLEC Trigger: ACACTCTAAGAGTTGATTGCACACCACTGATGTACA...CAGTATCAGACAATTATCAGAAATATAATACAGCCTTCCCAGATCTACTCTGTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001824.7 ENSMUST00000107271.10 |
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| CDS-3UTR CCA 90 bp | GACAGAGTAGATCTGGGAAGGCTGTATTATATTTCTGATAATTGTCTGATACTGTTCTTCATGCCAGAATaGGAAACATTACCAGTAGCT | + |
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Preference number: 4 (lower is better) Translates to: DRVDLGRLYYISDNCLILFFMPE*ETLPVA Trigger: AGCTACTGGTAATGTTTCCCATTCTGGCATGAAGAA...CAGTATCAGACAATTATCAGAAATATAATACAGCCTTCCCAGATCTACTCTGTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001824.7 ENSMUST00000107271.10 |
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| CDS-3UTR CCA 90 bp | GACAGAGTAGATCTGGGAAGGCTGTATTATATTTCTGATAATTGTCTGATACTGTTCAAAACCTTCATCTaGGCTTTGCAGCTCTTTTGT | + |
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Preference number: 4 (lower is better) Translates to: DRVDLGRLYYISDNCLILFKTFI*ALQLFC Trigger: ACAAAAGAGCTGCAAAGCCCAGATGAAGGTTTTGAA...CAGTATCAGACAATTATCAGAAATATAATACAGCCTTCCCAGATCTACTCTGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001824.7 ENSMUST00000107271.10 |
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| CDS-3UTR GCA 90 bp | GACAGAGTAGATCTGGGAAGGCTGTATTATATTTCTGATAATTGTCTGATACTGAAAACTCCTTCTTCATaGCAGAATGGGAAACATTAC | + |
|
Preference number: 4 (lower is better) Translates to: DRVDLGRLYYISDNCLILKTPSS*QNGKHY Trigger: GTAATGTTTCCCATTCTGGCATGAAGAAGGAGTTTT...CAGTATCAGACAATTATCAGAAATATAATACAGCCTTCCCAGATCTACTCTGTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001824.7 ENSMUST00000107271.10 |
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| CDS-3UTR CCA 90 bp | GACAGAGTAGATCTGGGAAGGCTGTATTATATTTCTGATAATTGTCTGATACTGAGGATGAGTTTTATTTaGATAGGACAGCAAGACATC | + |
|
Preference number: 4 (lower is better) Translates to: DRVDLGRLYYISDNCLILRMSFI*IGQQDI Trigger: GATGTCTTGCTGTCCTATCCAAATAAAACTCATCCT...CAGTATCAGACAATTATCAGAAATATAATACAGCCTTCCCAGATCTACTCTGTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001824.7 ENSMUST00000107271.10 |
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| CDS-3UTR CCA 90 bp | GACAGAGTAGATCTGGGAAGGCTGTATTATATTTCTGATAATTGTCTGATACTGTCCAGATACATCAGCTaGTCATTCATAATTCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: DRVDLGRLYYISDNCLILSRYIS*SFIILS Trigger: ACTGAGAATTATGAATGACCAGCTGATGTATCTGGA...CAGTATCAGACAATTATCAGAAATATAATACAGCCTTCCCAGATCTACTCTGTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001824.7 ENSMUST00000107271.10 |
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| CDS-3UTR CAA 90 bp | ATTGTGGCTAATATGATCTTCCCAGCCTTTCGTGGCCAGAGTGTATCTAGTCCCACCCTCTGGTGTCCCTaGTGGAGAGAAGGCACTGTA | + |
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Preference number: 5 (lower is better) Translates to: IVANMIFPAFRGQSVSSPTLWCP*WREGTV Trigger: TACAGTGCCTTCTCTCCACAAGGGACACCAGAGGGT...GGGACTAGATACACTCTGGCCACGAAAGGCTGGGAAGATCATATTAGCCACAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001824.7 |
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| CDS-3UTR CAA 90 bp | AATATGATCTTCCCAGCCTTTCGTGGCCAGAGTGTATCTAGTCCCCCAGATGAATTGCCAGACCCCAGCTaGCTAATTCTGGGCATTCCA | + |
|
Preference number: 5 (lower is better) Translates to: NMIFPAFRGQSVSSPPDELPDPS*LILGIP Trigger: TGGAATGCCCAGAATTAGCAAGCTGGGGTCTGGCAA...TTCATCTGGGGGACTAGATACACTCTGGCCACGAAAGGCTGGGAAGATCATATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001824.7 |
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| CDS-3UTR CAA 90 bp | ATTGTGGCTAATATGATCTTCCCAGCCTTTCGTGGCCAGAGTGTATCTAGTCCCAACACTTCAAAATCATaGCCAGACCCCAGCTTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: IVANMIFPAFRGQSVSSPNTSKS*PDPSLL Trigger: TAGCAAGCTGGGGTCTGGCAATGATTTTGAAGTGTT...GGGACTAGATACACTCTGGCCACGAAAGGCTGGGAAGATCATATTAGCCACAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001824.7 |
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| CDS-3UTR CAA 90 bp | GACAGAGTAGATCTGGGAAGGCTGTATTATATTTCTGATAATTGTCTGATACTGACCCTCTGGTGTCCCTaGTGGAGAGAAGGCACTGTA | + |
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Preference number: 5 (lower is better) Translates to: DRVDLGRLYYISDNCLILTLWCP*WREGTV Trigger: TACAGTGCCTTCTCTCCACAAGGGACACCAGAGGGT...CAGTATCAGACAATTATCAGAAATATAATACAGCCTTCCCAGATCTACTCTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001824.7 ENSMUST00000107271.10 |
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| CDS-3UTR CAA 90 bp | TCAGCTATTGTGGCTAATATGATCTTCCCAGCCTTTCGTGGCCAGAGTGTATCTAAGCTCAAAATTATTTaGTGTTCCTGCCAAGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SAIVANMIFPAFRGQSVSKLKII*CSCQVW Trigger: CCACACTTGGCAGGAACACAAAATAATTTTGAGCTT...AGATACACTCTGGCCACGAAAGGCTGGGAAGATCATATTAGCCACAATAGCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001824.7 |
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| CDS-3UTR CAA 90 bp | GACAGAGTAGATCTGGGAAGGCTGTATTATATTTCTGATAATTGTCTGATACTGTTGCCAGACCCCAGCTaGCTAATTCTGGGCATTCCA | + |
|
Preference number: 5 (lower is better) Translates to: DRVDLGRLYYISDNCLILLPDPS*LILGIP Trigger: TGGAATGCCCAGAATTAGCAAGCTGGGGTCTGGCAA...CAGTATCAGACAATTATCAGAAATATAATACAGCCTTCCCAGATCTACTCTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001824.7 ENSMUST00000107271.10 |
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| CDS-3UTR CAA 90 bp | GACAGAGTAGATCTGGGAAGGCTGTATTATATTTCTGATAATTGTCTGATACTGGGTTCCAGAGCTCCTTaGAGGGTGCCAATGACATTA | + |
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Preference number: 5 (lower is better) Translates to: DRVDLGRLYYISDNCLILGSRAP*RVPMTL Trigger: TAATGTCATTGGCACCCTCAAAGGAGCTCTGGAACC...CAGTATCAGACAATTATCAGAAATATAATACAGCCTTCCCAGATCTACTCTGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001824.7 ENSMUST00000107271.10 |
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| CDS-3UTR CAA 90 bp | GACAGAGTAGATCTGGGAAGGCTGTATTATATTTCTGATAATTGTCTGATACTGGCTCTTGTAGGAGTCTaGAATGTTCCTCTGCCCACT | + |
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Preference number: 5 (lower is better) Translates to: DRVDLGRLYYISDNCLILALVGV*NVPLPT Trigger: AGTGGGCAGAGGAACATTCAAGACTCCTACAAGAGC...CAGTATCAGACAATTATCAGAAATATAATACAGCCTTCCCAGATCTACTCTGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001824.7 ENSMUST00000107271.10 |
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| CDS-3UTR CAA 90 bp | GACAGAGTAGATCTGGGAAGGCTGTATTATATTTCTGATAATTGTCTGATACTGAGTCTCTGCTGCAGCTaGCACTGTAAAGGTTGCAAT | + |
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Preference number: 5 (lower is better) Translates to: DRVDLGRLYYISDNCLILSLCCS*HCKGCN Trigger: ATTGCAACCTTTACAGTGCAAGCTGCAGCAGAGACT...CAGTATCAGACAATTATCAGAAATATAATACAGCCTTCCCAGATCTACTCTGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001824.7 ENSMUST00000107271.10 |
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| CDS CCA 90 bp | GGTAAGCCTAAAGGATCAATGAATGCACGTTCCAGATACATCAGCTaGTCATTCATAATTCTCAGTAATATGGGGTTGCTTTTGTCTAAC | + |
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Preference number: 5 (lower is better) Translates to: GKPKGSMNARSRYIS*SFIILSNMGLLLSN Trigger: GTTAGACAAAAGCAACCCCATATTACTGAGAATTATGAATGACCAGCTGATGTATCTGGAACGTGCATTCATTGATCCTTTAGGCTTACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001824.7 ENSMUST00000107271.10 |
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| CDS-3UTR CAA 90 bp | GACAGAGTAGATCTGGGAAGGCTGTATTATATTTCTGATAATTGTCTGATACTGAACACTTCAAAATCATaGCCAGACCCCAGCTTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: DRVDLGRLYYISDNCLILNTSKS*PDPSLL Trigger: TAGCAAGCTGGGGTCTGGCAATGATTTTGAAGTGTT...CAGTATCAGACAATTATCAGAAATATAATACAGCCTTCCCAGATCTACTCTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001824.7 ENSMUST00000107271.10 |
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| CDS-3UTR CAA 90 bp | GACAGAGTAGATCTGGGAAGGCTGTATTATATTTCTGATAATTGTCTGATACTGAAGCTCAAAATTATTTaGTGTTCCTGCCAAGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: DRVDLGRLYYISDNCLILKLKII*CSCQVW Trigger: CCACACTTGGCAGGAACACAAAATAATTTTGAGCTT...CAGTATCAGACAATTATCAGAAATATAATACAGCCTTCCCAGATCTACTCTGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001824.7 ENSMUST00000107271.10 |
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| CDS-3UTR CAA 90 bp | GACAGAGTAGATCTGGGAAGGCTGTATTATATTTCTGATAATTGTCTGATACTGGGAAGCACTATAGAATaGGCAAGTTCAAATACCATC | + |
|
Preference number: 5 (lower is better) Translates to: DRVDLGRLYYISDNCLILGSTIE*ASSNTI Trigger: GATGGTATTTGAACTTGCCAATTCTATAGTGCTTCC...CAGTATCAGACAATTATCAGAAATATAATACAGCCTTCCCAGATCTACTCTGTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001824.7 ENSMUST00000107271.10 |
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| CDS CCA 72 bp | AAAGGATCAATGAATGCACGTTCCAGATACATCAGCTaGTCATTCATAATTCTCAGTAATATGGGGTTGCTT | + |
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Preference number: 6 (lower is better) Translates to: KGSMNARSRYIS*SFIILSNMGLL Trigger: AAGCAACCCCATATTACTGAGAATTATGAATGACCAGCTGATGTATCTGGAACGTGCATTCATTGATCCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001824.7 ENSMUST00000107271.10 |
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| CDS CCA 72 bp | TTCAATTCATGCAAAAACTCCTTCTTCATGCCAGAATaGGAAACATTACCAGTAGCTTCATTGGAAGGTTTT | + |
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Preference number: 6 (lower is better) Translates to: FNSCKNSFFMPE*ETLPVASLEGF Trigger: AAAACCTTCCAATGAAGCTACTGGTAATGTTTCCCATTCTGGCATGAAGAAGGAGTTTTTGCATGAATTGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001824.7 ENSMUST00000107271.10 |
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