Pregenerated sensors for FNTB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033373Ensembl transcript IDs: ENSMUST00000041008.10, ENSMUST00000125842.8
Found 148 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTCACCTTGAGCGTGGAGGGCTCGGTGCAGCAGGGGCAGGAGCCCTaGCTGCCAGAAGGAGTAGCAGCCGTCCACCAGCTTGTTGCAGCG | + |
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Preference number: 1 (lower is better) Translates to: VTLSVEGSVQQGQEP*LPEGVAAVHQLVAA Trigger: CGCTGCAACAAGCTGGTGGACGGCTGCTACTCCTTCTGGCAGGCAGGGCTCCTGCCCCTGCTGCACCGAGCCCTCCACGCTCAAGGTGAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125842.8 |
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| 3UTR GCA 90 bp | GGAGCCCTGCCTGCCAGAAGGAGTAGCAGCCGTCCACCAGCTTGTTaGAGCGGCCCTGAAAGCCTCCTTCAAACCGCATCTGCCGGCTTG | + |
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Preference number: 1 (lower is better) Translates to: GALPARRSSSRPPAC*SGPESLLQTASAGL Trigger: CAAGCCGGCAGATGCGGTTTGAAGGAGGCTTTCAGGGCCGCTGCAACAAGCTGGTGGACGGCTGCTACTCCTTCTGGCAGGCAGGGCTCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125842.8 |
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| 3UTR CCA 90 bp | CGCAGCCAAGCCACAGAAGGTGTAGCCACCGTGGGCTTCCATCCCTaGCACCCCACCAATGCCGCCTTCCCAGTTCTGGCACCTGGCTAT | + |
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Preference number: 1 (lower is better) Translates to: RSQATEGVATVGFHP*HPTNAAFPVLAPGY Trigger: ATAGCCAGGTGCCAGAACTGGGAAGGCGGCATTGGTGGGGTGCCAGGGATGGAAGCCCACGGTGGCTACACCTTCTGTGGCTTGGCTGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125842.8 |
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| 3UTR TCA 90 bp | TGTACTCCTGCAGCGCCTGCTGATGGAACATCCAATGGCTCATGCTaGGGGCAGGGTCACCTTGAGCGTGGAGGGCTCGGTGCAGCAGGG | + |
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Preference number: 1 (lower is better) Translates to: CTPAAPADGTSNGSC*GQGHLERGGLGAAG Trigger: CCCTGCTGCACCGAGCCCTCCACGCTCAAGGTGACCCTGCCCTCAGCATGAGCCATTGGATGTTCCATCAGCAGGCGCTGCAGGAGTACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125842.8 |
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| 3UTR GCA 90 bp | GTTGTAGGCTTCCTCTGTGCCGATGATGCACAGCGCATTGACGGCTaGATAAGTGGGTGCGAGGTGTGGGTACTGACCGGGGCCCCCTCC | + |
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Preference number: 1 (lower is better) Translates to: VVGFLCADDAQRIDG*ISGCEVWVLTGAPS Trigger: GGAGGGGGCCCCGGTCAGTACCCACACCTCGCACCCACTTATGCAGCCGTCAATGCGCTGTGCATCATCGGCACAGAGGAAGCCTACAAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125842.8 |
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| 3UTR CCA 90 bp | GATGATGCACAGCGCATTGACGGCTGCATAAGTGGGTGCGAGGTGTaGGTACTGACCGGGGCCCCCTCCAAAGCCACCGTCTGGACTCTG | + |
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Preference number: 1 (lower is better) Translates to: DDAQRIDGCISGCEV*VLTGAPSKATVWTL Trigger: CAGAGTCCAGACGGTGGCTTTGGAGGGGGCCCCGGTCAGTACCCACACCTCGCACCCACTTATGCAGCCGTCAATGCGCTGTGCATCATC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125842.8 |
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| 3UTR GCA 90 bp | GGATGGACGAGCAAACTCAGCACCCTACAGACCGTGCCAGGCCGGTaGAGGGCAGTTCCAGGATTACTGCCAGCCCTACTACCTGAGGCT | + |
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Preference number: 1 (lower is better) Translates to: GWTSKLSTLQTVPGR*RAVPGLLPALLPEA Trigger: AGCCTCAGGTAGTAGGGCTGGCAGTAATCCTGGAACTGCCCTGCACCGGCCTGGCACGGTCTGTAGGGTGCTGAGTTTGCTCGTCCATCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
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| 3UTR TCA 90 bp | GGGGAGCTGGGAGAGCCACGGGGTCCTCTAGTCGGTGGCAGGATCTaGGGTCACCTCATCTTCACATTCCTCAAAGCCTGGGACTGGCTT | + |
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Preference number: 1 (lower is better) Translates to: GELGEPRGPLVGGRI*GHLIFTFLKAWDWL Trigger: AAGCCAGTCCCAGGCTTTGAGGAATGTGAAGATGAGGTGACCTCAGATCCTGCCACCGACTAGAGGACCCCGTGGCTCTCCCAGCTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125842.8 |
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| 3UTR CCA 90 bp | TTGTCTGACGGGGGAGCTGGGAGAGCCACGGGGTCCTCTAGTCGGTaGCAGGATCTGAGGTCACCTCATCTTCACATTCCTCAAAGCCTG | + |
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Preference number: 1 (lower is better) Translates to: LSDGGAGRATGSSSR*QDLRSPHLHIPQSL Trigger: CAGGCTTTGAGGAATGTGAAGATGAGGTGACCTCAGATCCTGCCACCGACTAGAGGACCCCGTGGCTCTCCCAGCTCCCCCGTCAGACAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125842.8 |
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| 3UTR GCA 90 bp | TGTGTGGGCTGCAGAACGTTTTCGGGCACACCCATGACCATATCGTaGAACATGGCTCCGCTTCCGAAATGCTGGGCAATGGAGAGGCCG | + |
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Preference number: 1 (lower is better) Translates to: CVGCRTFSGTPMTIS*NMAPLPKCWAMERP Trigger: CGGCCTCTCCATTGCCCAGCATTTCGGAAGCGGAGCCATGTTGCACGATATGGTCATGGGTGTGCCCGAAAACGTTCTGCAGCCCACACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125842.8 |
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| 3UTR TCA 90 bp | TGTACACAGGGTGTGTGGGCTGCAGAACGTTTTCGGGCACACCCATaGCCATATCGTGCAACATGGCTCCGCTTCCGAAATGCTGGGCAA | + |
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Preference number: 1 (lower is better) Translates to: CTQGVWAAERFRAHP*PYRATWLRFRNAGQ Trigger: TTGCCCAGCATTTCGGAAGCGGAGCCATGTTGCACGATATGGTCATGGGTGTGCCCGAAAACGTTCTGCAGCCCACACACCCTGTGTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125842.8 |
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| 3UTR CCA 90 bp | GTTCTGGCACCTGGCTATCCATTCGGCCGTGCCTTCAAAGAGGTCTaGAGTGATGATGTTGGTGAGAGAGGCTACCGAGGCAGCACAGTA | + |
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Preference number: 1 (lower is better) Translates to: VLAPGYPFGRAFKEV*SDDVGERGYRGSTV Trigger: TACTGTGCTGCCTCGGTAGCCTCTCTCACCAACATCATCACTCCAGACCTCTTTGAAGGCACGGCCGAATGGATAGCCAGGTGCCAGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125842.8 |
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| 3UTR CCA 90 bp | TCCTCAAAGCCTGGGACTGGCTTCTGCAGAAAGTGTGTGGTGGCCTaGATCACCTTCTCAGGTCCAATGTTGTACACAGGGTGTGTGGGC | + |
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Preference number: 1 (lower is better) Translates to: SSKPGTGFCRKCVVA*ITFSGPMLYTGCVG Trigger: GCCCACACACCCTGTGTACAACATTGGACCTGAGAAGGTGATCCAGGCCACCACACACTTTCTGCAGAAGCCAGTCCCAGGCTTTGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125842.8 |
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| 3UTR TCA 90 bp | CCTTGCACAGAGCTAAGATTTATACCAGAGAGGATGCCGGTCTGGTaGCTGAATGGTGTGTGTGGGTGGAGTCACAGCAGTGGCTGGGAT | + |
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Preference number: 1 (lower is better) Translates to: PCTELRFIPERMPVW*LNGVCGWSHSSGWD Trigger: ATCCCAGCCACTGCTGTGACTCCACCCACACACACCATTCAGTCACCAGACCGGCATCCTCTCTGGTATAAATCTTAGCTCTGTGCAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041008.10 ENSMUST00000125842.8 |
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| 3UTR GCA 90 bp | GAGGCAGCACAGTATGCACTCCTTACGTCCACCTCACCTCCGACGTaGATGAGAAAAGAGCCGTCGGGTTGCTTTAGGGAGTACAAATAC | + |
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Preference number: 1 (lower is better) Translates to: EAAQYALLTSTSPPT*MRKEPSGCFREYKY Trigger: GTATTTGTACTCCCTAAAGCAACCCGACGGCTCTTTTCTCATGCACGTCGGAGGTGAGGTGGACGTAAGGAGTGCATACTGTGCTGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125842.8 |
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| 3UTR GCA 90 bp | TGGAGTGATGATGTTGGTGAGAGAGGCTACCGAGGCAGCACAGTATaGACTCCTTACGTCCACCTCACCTCCGACGTGCATGAGAAAAGA | + |
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Preference number: 1 (lower is better) Translates to: WSDDVGERGYRGSTV*TPYVHLTSDVHEKR Trigger: TCTTTTCTCATGCACGTCGGAGGTGAGGTGGACGTAAGGAGTGCATACTGTGCTGCCTCGGTAGCCTCTCTCACCAACATCATCACTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125842.8 |
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| 3UTR GCA 90 bp | GAGGTCACCTCATCTTCACATTCCTCAAAGCCTGGGACTGGCTTCTaGAGAAAGTGTGTGGTGGCCTGGATCACCTTCTCAGGTCCAATG | + |
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Preference number: 1 (lower is better) Translates to: EVTSSSHSSKPGTGF*RKCVVAWITFSGPM Trigger: CATTGGACCTGAGAAGGTGATCCAGGCCACCACACACTTTCTGCAGAAGCCAGTCCCAGGCTTTGAGGAATGTGAAGATGAGGTGACCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125842.8 |
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| 3UTR CCA 90 bp | CACATTCCTCAAAGCCTGGGACTGGCTTCTGCAGAAAGTGTGTGGTaGCCTGGATCACCTTCTCAGGTCCAATGTTGTACACAGGGTGTG | + |
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Preference number: 1 (lower is better) Translates to: HIPQSLGLASAESVW*PGSPSQVQCCTQGV Trigger: CACACCCTGTGTACAACATTGGACCTGAGAAGGTGATCCAGGCCACCACACACTTTCTGCAGAAGCCAGTCCCAGGCTTTGAGGAATGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125842.8 |
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| 3UTR CCA 90 bp | AGAGCTAAGATTTATACCAGAGAGGATGCCGGTCTGGTGACTGAATaGTGTGTGTGGGTGGAGTCACAGCAGTGGCTGGGATGCAGATAC | + |
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Preference number: 1 (lower is better) Translates to: RAKIYTREDAGLVTE*CVWVESQQWLGCRY Trigger: GTATCTGCATCCCAGCCACTGCTGTGACTCCACCCACACACACCATTCAGTCACCAGACCGGCATCCTCTCTGGTATAAATCTTAGCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041008.10 ENSMUST00000125842.8 |
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| 3UTR CCA 90 bp | AAATATGGCCTACTGGAGCCCAGTGCTCTCTTCCAGAGCTCGTATTaGCTGGACCCACAGCCCCACCCTTGCACAGAGCTAAGATTTATA | + |
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Preference number: 1 (lower is better) Translates to: KYGLLEPSALFQSSY*LDPQPHPCTELRFI Trigger: TATAAATCTTAGCTCTGTGCAAGGGTGGGGCTGTGGGTCCAGCCAATACGAGCTCTGGAAGAGAGCACTGGGCTCCAGTAGGCCATATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
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| 3UTR CCA 90 bp | TTGCAGATGACTGGGGTGAAAGAGACAAGCATAAATATGGCCTACTaGAGCCCAGTGCTCTCTTCCAGAGCTCGTATTGGCTGGACCCAC | + |
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Preference number: 1 (lower is better) Translates to: LQMTGVKETSINMAY*SPVLSSRARIGWTH Trigger: GTGGGTCCAGCCAATACGAGCTCTGGAAGAGAGCACTGGGCTCCAGTAGGCCATATTTATGCTTGTCTCTTTCACCCCAGTCATCTGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
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| 3UTR CCA 90 bp | CTTCACATTCCTCAAAGCCTGGGACTGGCTTCTGCAGAAAGTGTGTaGTGGCCTGGATCACCTTCTCAGGTCCAATGTTGTACACAGGGT | + |
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Preference number: 1 (lower is better) Translates to: LHIPQSLGLASAESV*WPGSPSQVQCCTQG Trigger: ACCCTGTGTACAACATTGGACCTGAGAAGGTGATCCAGGCCACCACACACTTTCTGCAGAAGCCAGTCCCAGGCTTTGAGGAATGTGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125842.8 |
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| 3UTR TCA 90 bp | CAGCACAGTATGCACTCCTTACGTCCACCTCACCTCCGACGTGCATaGGAAAAGAGCCGTCGGGTTGCTTTAGGGAGTACAAATACTGAA | + |
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Preference number: 1 (lower is better) Translates to: QHSMHSLRPPHLRRA*EKSRRVALGSTNTE Trigger: TTCAGTATTTGTACTCCCTAAAGCAACCCGACGGCTCTTTTCTCATGCACGTCGGAGGTGAGGTGGACGTAAGGAGTGCATACTGTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125842.8 |
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| 3UTR CCA 90 bp | ATTTATACCAGAGAGGATGCCGGTCTGGTGACTGAATGGTGTGTGTaGGTGGAGTCACAGCAGTGGCTGGGATGCAGATACTCACAGATA | + |
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Preference number: 1 (lower is better) Translates to: IYTREDAGLVTEWCV*VESQQWLGCRYSQI Trigger: TATCTGTGAGTATCTGCATCCCAGCCACTGCTGTGACTCCACCCACACACACCATTCAGTCACCAGACCGGCATCCTCTCTGGTATAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041008.10 ENSMUST00000125842.8 |
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| 3UTR CCA 90 bp | TCTAAGAGCCTTCTTCATTCCCGACCCCTGTCCTTTGCAGATGACTaGGGTGAAAGAGACAAGCATAAATATGGCCTACTGGAGCCCAGT | + |
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Preference number: 1 (lower is better) Translates to: SKSLLHSRPLSFADD*GERDKHKYGLLEPS Trigger: ACTGGGCTCCAGTAGGCCATATTTATGCTTGTCTCTTTCACCCCAGTCATCTGCAAAGGACAGGGGTCGGGAATGAAGAAGGCTCTTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
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| 3UTR-3UTR TCA 90 bp | GCTGTCCCGGCAGCAGCCAGCCTGCCTGGAGTGGACAGGGCGGGAACAAATCCTGCCTCTCCTGGTACATaGTGGGGAGAGGCAGGGGCT | + |
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Preference number: 2 (lower is better) Translates to: AVPAAASLPGVDRAGTNPASPGT*WGEAGA Trigger: AGCCCCTGCCTCTCCCCATCATGTACCAGGAGAGGC...AGGATTTGTTCCCGCCCTGTCCACTCCAGGCAGGCTGGCTGCTGCCGGGACAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
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| 3UTR-3UTR CCA 90 bp | GCCGTCCACCAGCTTGTTGCAGCGGCCCTGAAAGCCTCCTTCAAACCGCATCTGGTGGGCTTCCATCCCTaGCACCCCACCAATGCCGCC | + |
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Preference number: 2 (lower is better) Translates to: AVHQLVAAALKASFKPHLVGFHP*HPTNAA Trigger: GGCGGCATTGGTGGGGTGCCAGGGATGGAAGCCCAC...CAGATGCGGTTTGAAGGAGGCTTTCAGGGCCGCTGCAACAAGCTGGTGGACGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125842.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGTCCCGGCAGCAGCCAGCCTGCCTGGAGTGGACAGGGCGGGAACAAATCCTCCTACTGGAGCCCAGTaGTCTCTTCCAGAGCTCGTA | + |
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Preference number: 2 (lower is better) Translates to: AVPAAASLPGVDRAGTNPPTGAQ*SLPELV Trigger: TACGAGCTCTGGAAGAGAGCACTGGGCTCCAGTAGG...AGGATTTGTTCCCGCCCTGTCCACTCCAGGCAGGCTGGCTGCTGCCGGGACAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
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| 3UTR-3UTR GCA 90 bp | GCCGTCCACCAGCTTGTTGCAGCGGCCCTGAAAGCCTCCTTCAAACCGCATCTGCTGGCACCCCACCAATaGCGCCTTCCCAGTTCTGGC | + |
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Preference number: 2 (lower is better) Translates to: AVHQLVAAALKASFKPHLLAPHQ*RLPSSG Trigger: GCCAGAACTGGGAAGGCGGCATTGGTGGGGTGCCAG...CAGATGCGGTTTGAAGGAGGCTTTCAGGGCCGCTGCAACAAGCTGGTGGACGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125842.8 |
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| 3UTR-3UTR CCA 90 bp | GGTGGGGAGAAGGAACCTGGGCCGCAGCATAGCTGGAGGAGGGCCTCTCCTGGTAATGGTGTGTGTGGGTaGAGTCACAGCAGTGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: GGEKEPGPQHSWRRASPGNGVCG*SHSSGW Trigger: CCAGCCACTGCTGTGACTCCACCCACACACACCATT...ACCAGGAGAGGCCCTCCTCCAGCTATGCTGCGGCCCAGGTTCCTTCTCCCCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
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| 3UTR-3UTR CCA 90 bp | GGGGTGCGCTGCTGCTTCCCAGCATACACTGCTCCCAACCTGGCTTGCTACATCTCTTGGAGGGGTGGGTaGGGAGAAGGAACCTGGGCC | + |
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Preference number: 2 (lower is better) Translates to: GVRCCFPAYTAPNLACYISWRGG*GEGTWA Trigger: GGCCCAGGTTCCTTCTCCCCACCCACCCCTCCAAGA...GATGTAGCAAGCCAGGTTGGGAGCAGTGTATGCTGGGAAGCAGCAGCGCACCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
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| 3UTR-3UTR CCA 90 bp | GGTGGGGAGAAGGAACCTGGGCCGCAGCATAGCTGGAGGAGGGCCTCTCCTGGTACTGAATGGTGTGTGTaGGTGGAGTCACAGCAGTGG | + |
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Preference number: 2 (lower is better) Translates to: GGEKEPGPQHSWRRASPGTEWCV*VESQQW Trigger: CCACTGCTGTGACTCCACCCACACACACCATTCAGT...ACCAGGAGAGGCCCTCCTCCAGCTATGCTGCGGCCCAGGTTCCTTCTCCCCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
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| 3UTR-3UTR CCA 90 bp | ACGGGGTCCTCTAGTCGGTGGCAGGATCTGAGGTCACCTCATCTTCACATTCCTAGTGGGTGCGAGGTGTaGGTACTGACCGGGGCCCCC | + |
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Preference number: 2 (lower is better) Translates to: TGSSSRWQDLRSPHLHIPSGCEV*VLTGAP Trigger: GGGGGCCCCGGTCAGTACCCACACCTCGCACCCACT...AGGAATGTGAAGATGAGGTGACCTCAGATCCTGCCACCGACTAGAGGACCCCGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125842.8 |
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| 3UTR CAA 90 bp | GGCTCAAGTAGCACAGAGCGTGCTACACACCCAAATGGAGAAACCTaGTCTGACGGGGGAGCTGGGAGAGCCACGGGGTCCTCTAGTCGG | + |
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Preference number: 2 (lower is better) Translates to: GSSSTERATHPNGET*SDGGAGRATGSSSR Trigger: CCGACTAGAGGACCCCGTGGCTCTCCCAGCTCCCCCGTCAGACAAGGTTTCTCCATTTGGGTGTGTAGCACGCTCTGTGCTACTTGAGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125842.8 |
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| 3UTR-3UTR TCA 90 bp | GCGCTGCTGCTTCCCAGCATACACTGCTCCCAACCTGGCTTGCTACATCGGCTCTTGTTGCAGCGGCCCTaGAAGCCTCCTTCAAACCGC | + |
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Preference number: 2 (lower is better) Translates to: ALLLPSIHCSQPGLLHRLLLQRP*KPPSNR Trigger: GCGGTTTGAAGGAGGCTTTCAGGGCCGCTGCAACAA...GAGCCGATGTAGCAAGCCAGGTTGGGAGCAGTGTATGCTGGGAAGCAGCAGCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125842.8 |
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| 3UTR-3UTR TCA 90 bp | GGGGTGCGCTGCTGCTTCCCAGCATACACTGCTCCCAACCTGGCTTGCTACATCTCCAATGGCTCATGCTaGGGGCAGGGTCACCTTGAG | + |
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Preference number: 2 (lower is better) Translates to: GVRCCFPAYTAPNLACYISNGSC*GQGHLE Trigger: CTCAAGGTGACCCTGCCCTCAGCATGAGCCATTGGA...GATGTAGCAAGCCAGGTTGGGAGCAGTGTATGCTGGGAAGCAGCAGCGCACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125842.8 |
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| 3UTR-3UTR GCA 90 bp | GCGCTGCTGCTTCCCAGCATACACTGCTCCCAACCTGGCTTGCTACATCGGCTCCCTTCAAACCGCATCTaGCGGCTTGTCACCCATTGT | + |
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Preference number: 2 (lower is better) Translates to: ALLLPSIHCSQPGLLHRLPSNRI*RLVTHC Trigger: ACAATGGGTGACAAGCCGGCAGATGCGGTTTGAAGG...GAGCCGATGTAGCAAGCCAGGTTGGGAGCAGTGTATGCTGGGAAGCAGCAGCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125842.8 |
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| 3UTR-3UTR CCA 90 bp | GGCCGCTCAGGCAGTAGCAAGTATGATAGAAGTCACGTGACTTGCCAGGCTTGTAGAGCCAGGGGCGGCTaGCATCCAGACACTCATAGG | + |
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Preference number: 2 (lower is better) Translates to: GRSGSSKYDRSHVTCQACRARGG*HPDTHR Trigger: CCTATGAGTGTCTGGATGCCAGCCGCCCCTGGCTCT...ACAAGCCTGGCAAGTCACGTGACTTCTATCATACTTGCTACTGCCTGAGCGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125842.8 |
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| 3UTR-3UTR CCA 90 bp | TTTCCCCAGGTTATGGGGAGGGCTCAATCTAAGAGCCTTCTTCATTCCCGACCCACACTGCTCCCAACCTaGCTTGCTACATCGGCTCCC | + |
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Preference number: 2 (lower is better) Translates to: FPQVMGRAQSKSLLHSRPTLLPT*LATSAP Trigger: GGGAGCCGATGTAGCAAGCCAGGTTGGGAGCAGTGT...GGGTCGGGAATGAAGAAGGCTCTTAGATTGAGCCCTCCCCATAACCTGGGGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
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| 3UTR-3UTR CCA 90 bp | GCGCTGCTGCTTCCCAGCATACACTGCTCCCAACCTGGCTTGCTACATCGGCTCATAAATATGGCCTACTaGAGCCCAGTGCTCTCTTCC | + |
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Preference number: 2 (lower is better) Translates to: ALLLPSIHCSQPGLLHRLINMAY*SPVLSS Trigger: GGAAGAGAGCACTGGGCTCCAGTAGGCCATATTTAT...GAGCCGATGTAGCAAGCCAGGTTGGGAGCAGTGTATGCTGGGAAGCAGCAGCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
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| 3UTR-3UTR CCA 90 bp | GAGTCACAGCAGTGGCTGGGATGCAGATACTCACAGATATCTTCCATTTCAGCAAGCAGCCAGCCTGCCTaGAGTGGACAGGGCGGGAAC | + |
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Preference number: 2 (lower is better) Translates to: ESQQWLGCRYSQISSISASSQPA*SGQGGN Trigger: GTTCCCGCCCTGTCCACTCCAGGCAGGCTGGCTGCT...TGCTGAAATGGAAGATATCTGTGAGTATCTGCATCCCAGCCACTGCTGTGACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
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| 3UTR-3UTR CCA 90 bp | GTACACAGGGTGTGTGGGCTGCAGAACGTTTTCGGGCACACCCATGACCATATCACTGACACACGTCTGTaGCCACTATCTGGGGGATGG | + |
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Preference number: 2 (lower is better) Translates to: VHRVCGLQNVFGHTHDHITDTRL*PLSGGW Trigger: CCATCCCCCAGATAGTGGCCACAGACGTGTGTCAGT...GATATGGTCATGGGTGTGCCCGAAAACGTTCTGCAGCCCACACACCCTGTGTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125842.8 |
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| 3UTR-3UTR TCA 90 bp | GCTGTCCCGGCAGCAGCCAGCCTGCCTGGAGTGGACAGGGCGGGAACAAATCCTTGGCTTTGTTTTGTTTaGCAGGAAAGGACAAAGAAA | + |
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Preference number: 2 (lower is better) Translates to: AVPAAASLPGVDRAGTNPWLCFV*QERTKK Trigger: TTTCTTTGTCCTTTCCTGTCAAACAAAACAAAGCCA...AGGATTTGTTCCCGCCCTGTCCACTCCAGGCAGGCTGGCTGCTGCCGGGACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
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| 3UTR-3UTR GCA 90 bp | GCCGTCCACCAGCTTGTTGCAGCGGCCCTGAAAGCCTCCTTCAAACCGCATCTGAAAGAGCCGTCGGGTTaGTTTAGGGAGTACAAATAC | + |
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Preference number: 2 (lower is better) Translates to: AVHQLVAAALKASFKPHLKEPSG*FREYKY Trigger: GTATTTGTACTCCCTAAAGCAACCCGACGGCTCTTT...CAGATGCGGTTTGAAGGAGGCTTTCAGGGCCGCTGCAACAAGCTGGTGGACGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125842.8 |
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| 3UTR CAA 90 bp | TGTTGCAGCGGCCCTGAAAGCCTCCTTCAAACCGCATCTGCCGGCTaGTCACCCATTGTAGCAAGCTCTTCAGGTTCAAAGAACGTTCCT | + |
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Preference number: 2 (lower is better) Translates to: CCSGPESLLQTASAG*SPIVASSSGSKNVP Trigger: AGGAACGTTCTTTGAACCTGAAGAGCTTGCTACAATGGGTGACAAGCCGGCAGATGCGGTTTGAAGGAGGCTTTCAGGGCCGCTGCAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125842.8 |
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| 3UTR-3UTR CCA 90 bp | AATGCTGGGCAATGGAGAGGCCGCTCAGGCAGTAGCAAGTATGATAGAAGTCACCCACTATCTGGGGGATaGGTTCGTCAAGGAGCTCCA | + |
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Preference number: 2 (lower is better) Translates to: NAGQWRGRSGSSKYDRSHPLSGG*VRQGAP Trigger: TGGAGCTCCTTGACGAACCCATCCCCCAGATAGTGG...GTGACTTCTATCATACTTGCTACTGCCTGAGCGGCCTCTCCATTGCCCAGCATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125842.8 |
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| 3UTR-3UTR GCA 90 bp | ACCTTCTCAGGTCCAATGTTGTACACAGGGTGTGTGGGCTGCAGAACGTTTTCGCTATCCATTCGGCCGTaGCTTCAAAGAGGTCTGGAG | + |
|
Preference number: 2 (lower is better) Translates to: TFSGPMLYTGCVGCRTFSLSIRP*LQRGLE Trigger: CTCCAGACCTCTTTGAAGGCACGGCCGAATGGATAG...CGAAAACGTTCTGCAGCCCACACACCCTGTGTACAACATTGGACCTGAGAAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125842.8 |
||
| 3UTR-3UTR TCA 90 bp | GTCACAGCAGTGGCTGGGATGCAGATACTCACAGATATCTTCCATTTCAGCATTGCCTCGGAGAGGATGTaGCTCGGTTTTCCCCAGGTT | + |
|
Preference number: 2 (lower is better) Translates to: VTAVAGMQILTDIFHFSIASERM*LGFPQV Trigger: AACCTGGGGAAAACCGAGTCACATCCTCTCCGAGGC...AATGCTGAAATGGAAGATATCTGTGAGTATCTGCATCCCAGCCACTGCTGTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
||
| 3UTR-3UTR GCA 90 bp | CCCGACCCCTGTCCTTTGCAGATGACTGGGGTGAAAGAGACAAGCATAAATATGCTTCCCAGCATACACTaGTCCCAACCTGGCTTGCTA | + |
|
Preference number: 2 (lower is better) Translates to: PDPCPLQMTGVKETSINMLPSIH*SQPGLL Trigger: TAGCAAGCCAGGTTGGGAGCAGTGTATGCTGGGAAG...CATATTTATGCTTGTCTCTTTCACCCCAGTCATCTGCAAAGGACAGGGGTCGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
||
| 3UTR-3UTR GCA 90 bp | GAGTCACAGCAGTGGCTGGGATGCAGATACTCACAGATATCTTCCATTTCAGCAGGAAGAGCCTCATGCTaGATCTCCAAGCTCCCGTCT | + |
|
Preference number: 2 (lower is better) Translates to: ESQQWLGCRYSQISSISAGRASC*ISKLPS Trigger: AGACGGGAGCTTGGAGATGCAGCATGAGGCTCTTCC...TGCTGAAATGGAAGATATCTGTGAGTATCTGCATCCCAGCCACTGCTGTGACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
||
| 3UTR-3UTR CCA 90 bp | TTATGGGGAGGGCTCAATCTAAGAGCCTTCTTCATTCCCGACCCCTGTCCTTTGAGTCACAGCAGTGGCTaGGATGCAGATACTCACAGA | + |
|
Preference number: 2 (lower is better) Translates to: LWGGLNLRAFFIPDPCPLSHSSG*DADTHR Trigger: TCTGTGAGTATCTGCATCCCAGCCACTGCTGTGACT...CAAAGGACAGGGGTCGGGAATGAAGAAGGCTCTTAGATTGAGCCCTCCCCATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
||
| 3UTR-3UTR CCA 90 bp | ACCTTCTCAGGTCCAATGTTGTACACAGGGTGTGTGGGCTGCAGAACGTTTTCGAGTCACAGCAGTGGCTaGGATGCAGATACTCACAGA | + |
|
Preference number: 2 (lower is better) Translates to: TFSGPMLYTGCVGCRTFSSHSSG*DADTHR Trigger: TCTGTGAGTATCTGCATCCCAGCCACTGCTGTGACT...CGAAAACGTTCTGCAGCCCACACACCCTGTGTACAACATTGGACCTGAGAAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125842.8 |
||
| 3UTR CAA 90 bp | GGAGGGCTCAATCTAAGAGCCTTCTTCATTCCCGACCCCTGTCCTTaGCAGATGACTGGGGTGAAAGAGACAAGCATAAATATGGCCTAC | + |
|
Preference number: 2 (lower is better) Translates to: GGLNLRAFFIPDPCP*QMTGVKETSINMAY Trigger: GTAGGCCATATTTATGCTTGTCTCTTTCACCCCAGTCATCTGCAAAGGACAGGGGTCGGGAATGAAGAAGGCTCTTAGATTGAGCCCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
||
| 3UTR-3UTR CCA 90 bp | CAGGTTCAAAGAACGTTCCTTCTTGAGGATAACCAGCGCAGCCAAGCCACAGAAGCCTTCAAAGAGGTCTaGAGTGATGATGTTGGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: QVQRTFLLEDNQRSQATEAFKEV*SDDVGE Trigger: CTCACCAACATCATCACTCCAGACCTCTTTGAAGGC...TTCTGTGGCTTGGCTGCGCTGGTTATCCTCAAGAAGGAACGTTCTTTGAACCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125842.8 |
||
| 3UTR CAA 90 bp | AAATCACACCACCGTGTATTCCAACCCAGAGCTGATGGCTTTGTTTaGTTTGACAGGAAAGGACAAAGAAACCACAACTCCACAGTGGTC | + |
|
Preference number: 2 (lower is better) Translates to: KSHHRVFQPRADGFV*FDRKGQRNHNSTVV Trigger: GACCACTGTGGAGTTGTGGTTTCTTTGTCCTTTCCTGTCAAACAAAACAAAGCCATCAGCTCTGGGTTGGAATACACGGTGGTGTGATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041008.10 ENSMUST00000125842.8 |
||
| 3UTR-3UTR TCA 90 bp | ACCTTCTCAGGTCCAATGTTGTACACAGGGTGTGTGGGCTGCAGAACGTTTTCGTGGCTTTGTTTTGTTTaGCAGGAAAGGACAAAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: TFSGPMLYTGCVGCRTFSWLCFV*QERTKK Trigger: TTTCTTTGTCCTTTCCTGTCAAACAAAACAAAGCCA...CGAAAACGTTCTGCAGCCCACACACCCTGTGTACAACATTGGACCTGAGAAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125842.8 |
||
| 3UTR CAA 90 bp | TTTAAAAATCACACCACCGTGTATTCCAACCCAGAGCTGATGGCTTaGTTTTGTTTGACAGGAAAGGACAAAGAAACCACAACTCCACAG | + |
|
Preference number: 2 (lower is better) Translates to: FKNHTTVYSNPELMA*FCLTGKDKETTTPQ Trigger: CTGTGGAGTTGTGGTTTCTTTGTCCTTTCCTGTCAAACAAAACAAAGCCATCAGCTCTGGGTTGGAATACACGGTGGTGTGATTTTTAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041008.10 ENSMUST00000125842.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGCAGGGTCACCTTGAGCGTGGAGGGCTCGGTGCAGCAGGGGCAGGAGCCCTGCTTCCAGAGCTCGTATaGGCTGGACCCACAGCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: GQGHLERGGLGAAGAGALLPELV*AGPTAP Trigger: TGGGGCTGTGGGTCCAGCCAATACGAGCTCTGGAAG...CAGGGCTCCTGCCCCTGCTGCACCGAGCCCTCCACGCTCAAGGTGACCCTGCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125842.8 |
||
| 3UTR GCA 72 bp | CCGTGCCAGGCCGGTGCAGGGCAGTTCCAGGATTACTaGCAGCCCTACTACCTGAGGCTGCTGTCCCGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: PCQAGAGQFQDY*QPYYLRLLSRQ Trigger: CTGCCGGGACAGCAGCCTCAGGTAGTAGGGCTGGCAGTAATCCTGGAACTGCCCTGCACCGGCCTGGCACGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
||
| 3UTR-3UTR CAA 90 bp | GCTGTCCCGGCAGCAGCCAGCCTGCCTGGAGTGGACAGGGCGGGAACAAATCCTCTTCCAGAGCTCGTATaGGCTGGACCCACAGCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: AVPAAASLPGVDRAGTNPLPELV*AGPTAP Trigger: TGGGGCTGTGGGTCCAGCCAATACGAGCTCTGGAAG...AGGATTTGTTCCCGCCCTGTCCACTCCAGGCAGGCTGGCTGCTGCCGGGACAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
||
| 3UTR TCA 72 bp | CCAAGCTCCCGTCTGCCTGCTCACAGGCTGGGACAGTaGGGCGAGCTCGCTGTGACTGTAGCAGTGGATGGA | + |
|
Preference number: 3 (lower is better) Translates to: PSSRLPAHRLGQ*GELAVTVAVDG Trigger: TCCATCCACTGCTACAGTCACAGCGAGCTCGCCTCACTGTCCCAGCCTGTGAGCAGGCAGACGGGAGCTTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
||
| 3UTR TCA 72 bp | GCAGCGCCTGCTGATGGAACATCCAATGGCTCATGCTaGGGGCAGGGTCACCTTGAGCGTGGAGGGCTCGGT | + |
|
Preference number: 3 (lower is better) Translates to: AAPADGTSNGSC*GQGHLERGGLG Trigger: ACCGAGCCCTCCACGCTCAAGGTGACCCTGCCCTCAGCATGAGCCATTGGATGTTCCATCAGCAGGCGCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125842.8 |
||
| 3UTR GCA 72 bp | GTGGATGGACGAGCAAACTCAGCACCCTACAGACCGTaGCAGGCCGGTGCAGGGCAGTTCCAGGATTACTGC | + |
|
Preference number: 3 (lower is better) Translates to: VDGRANSAPYRP*QAGAGQFQDYC Trigger: GCAGTAATCCTGGAACTGCCCTGCACCGGCCTGGCACGGTCTGTAGGGTGCTGAGTTTGCTCGTCCATCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
||
| 3UTR CCA 72 bp | GGGGGAGCTGGGAGAGCCACGGGGTCCTCTAGTCGGTaGCAGGATCTGAGGTCACCTCATCTTCACATTCCT | + |
|
Preference number: 3 (lower is better) Translates to: GGAGRATGSSSR*QDLRSPHLHIP Trigger: AGGAATGTGAAGATGAGGTGACCTCAGATCCTGCCACCGACTAGAGGACCCCGTGGCTCTCCCAGCTCCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125842.8 |
||
| 3UTR GCA 72 bp | TTCCTCTGTGCCGATGATGCACAGCGCATTGACGGCTaGATAAGTGGGTGCGAGGTGTGGGTACTGACCGGG | + |
|
Preference number: 3 (lower is better) Translates to: FLCADDAQRIDG*ISGCEVWVLTG Trigger: CCCGGTCAGTACCCACACCTCGCACCCACTTATGCAGCCGTCAATGCGCTGTGCATCATCGGCACAGAGGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125842.8 |
||
| 3UTR GCA 72 bp | CCTGCCAGAAGGAGTAGCAGCCGTCCACCAGCTTGTTaGAGCGGCCCTGAAAGCCTCCTTCAAACCGCATCT | + |
|
Preference number: 3 (lower is better) Translates to: PARRSSSRPPAC*SGPESLLQTAS Trigger: AGATGCGGTTTGAAGGAGGCTTTCAGGGCCGCTGCAACAAGCTGGTGGACGGCTGCTACTCCTTCTGGCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125842.8 |
||
| 3UTR CCA 72 bp | CTACTGGAGCCCAGTGCTCTCTTCCAGAGCTCGTATTaGCTGGACCCACAGCCCCACCCTTGCACAGAGCTA | + |
|
Preference number: 3 (lower is better) Translates to: LLEPSALFQSSY*LDPQPHPCTEL Trigger: TAGCTCTGTGCAAGGGTGGGGCTGTGGGTCCAGCCAATACGAGCTCTGGAAGAGAGCACTGGGCTCCAGTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
||
| 3UTR CCA 72 bp | GGCTGTGCAGGATCCAGTAGCAGAGCCAGGGGCGGCTaGCATCCAGACACTCATAGGCATCTGTCAGTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: GCAGSSSRARGG*HPDTHRHLSVV Trigger: GACAACTGACAGATGCCTATGAGTGTCTGGATGCCAGCCGCCCCTGGCTCTGCTACTGGATCCTGCACAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125842.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGGTGCGCTGCTGCTTCCCAGCATACACTGCTCCCAACCTGGCTTGCTACATCCCCACAGCCCCACCCTaGCACAGAGCTAAGATTTAT | + |
|
Preference number: 3 (lower is better) Translates to: GVRCCFPAYTAPNLACYIPTAPP*HRAKIY Trigger: ATAAATCTTAGCTCTGTGCAAGGGTGGGGCTGTGGG...GATGTAGCAAGCCAGGTTGGGAGCAGTGTATGCTGGGAAGCAGCAGCGCACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000041008.10 ENSMUST00000125842.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGGGACTGGCTTCTGCAGAAAGTGTGTGGTGGCCTGGATCACCTTCTCAGGTCACCGCATCTGCCGGCTaGTCACCCATTGTAGCAAGC | + |
|
Preference number: 3 (lower is better) Translates to: LGLASAESVWWPGSPSQVTASAG*SPIVAS Trigger: GCTTGCTACAATGGGTGACAAGCCGGCAGATGCGGT...GACCTGAGAAGGTGATCCAGGCCACCACACACTTTCTGCAGAAGCCAGTCCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125842.8 |
||
| 3UTR TCA 72 bp | TGGCAGCACATCAGGATGTACTCCTGCAGCGCCTGCTaGTGGAACATCCAATGGCTCATGCTGAGGGCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: WQHIRMYSCSAC*WNIQWLMLRAG Trigger: CCCTGCCCTCAGCATGAGCCATTGGATGTTCCATCAGCAGGCGCTGCAGGAGTACATCCTGATGTGCTGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125842.8 |
||
| 3UTR TCA 72 bp | GGAGAGCCACGGGGTCCTCTAGTCGGTGGCAGGATCTaGGGTCACCTCATCTTCACATTCCTCAAAGCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: GEPRGPLVGGRI*GHLIFTFLKAW Trigger: CCAGGCTTTGAGGAATGTGAAGATGAGGTGACCTCAGATCCTGCCACCGACTAGAGGACCCCGTGGCTCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125842.8 |
||
| 3UTR GCA 72 bp | AGCAAATGGCCAGTGGTTAGGGGAAGAGCCTCATGCTaGATCTCCAAGCTCCCGTCTGCCTGCTCACAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: SKWPVVRGRASC*ISKLPSACSQA Trigger: AGCCTGTGAGCAGGCAGACGGGAGCTTGGAGATGCAGCATGAGGCTCTTCCCCTAACCACTGGCCATTTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
||
| 3UTR-3UTR CAA 90 bp | AGTGTGTGGTGGCCTGGATCACCTTCTCAGGTCCAATGTTGTACACAGGGTGTGTGCTCCCAACCTGGCTaGCTACATCGGCTCCCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: SVWWPGSPSQVQCCTQGVCSQPG*LHRLPE Trigger: CTCTGGGAGCCGATGTAGCAAGCCAGGTTGGGAGCA...CACACCCTGTGTACAACATTGGACCTGAGAAGGTGATCCAGGCCACCACACACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125842.8 |
||
| 3UTR GCA 72 bp | GATGTTGGTGAGAGAGGCTACCGAGGCAGCACAGTATaGACTCCTTACGTCCACCTCACCTCCGACGTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: DVGERGYRGSTV*TPYVHLTSDVH Trigger: ATGCACGTCGGAGGTGAGGTGGACGTAAGGAGTGCATACTGTGCTGCCTCGGTAGCCTCTCTCACCAACATC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125842.8 |
||
| 3UTR-3UTR CAA 90 bp | TTATGGGGAGGGCTCAATCTAAGAGCCTTCTTCATTCCCGACCCCTGTCCTTTGTGCTCCCAACCTGGCTaGCTACATCGGCTCCCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LWGGLNLRAFFIPDPCPLCSQPG*LHRLPE Trigger: CTCTGGGAGCCGATGTAGCAAGCCAGGTTGGGAGCA...CAAAGGACAGGGGTCGGGAATGAAGAAGGCTCTTAGATTGAGCCCTCCCCATAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
||
| 3UTR-3UTR CAA 90 bp | TCCCAGTTCTGGCACCTGGCTATCCATTCGGCCGTGCCTTCAAAGAGGTCTGGACCCACAGCCCCACCCTaGCACAGAGCTAAGATTTAT | + |
|
Preference number: 3 (lower is better) Translates to: SQFWHLAIHSAVPSKRSGPTAPP*HRAKIY Trigger: ATAAATCTTAGCTCTGTGCAAGGGTGGGGCTGTGGG...TCCAGACCTCTTTGAAGGCACGGCCGAATGGATAGCCAGGTGCCAGAACTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125842.8 |
||
| 3UTR TCA 72 bp | GGTGTGTGGGCTGCAGAACGTTTTCGGGCACACCCATaGCCATATCGTGCAACATGGCTCCGCTTCCGAAAT | + |
|
Preference number: 3 (lower is better) Translates to: GVWAAERFRAHP*PYRATWLRFRN Trigger: ATTTCGGAAGCGGAGCCATGTTGCACGATATGGTCATGGGTGTGCCCGAAAACGTTCTGCAGCCCACACACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125842.8 |
||
| 3UTR GCA 72 bp | TGCTGCTTCCCAGCATACACTGCTCCCAACCTGGCTTaGTACATCGGCTCCCAGAGTTTTGGCTTGACAGGT | + |
|
Preference number: 3 (lower is better) Translates to: CCFPAYTAPNLA*YIGSQSFGLTG Trigger: ACCTGTCAAGCCAAAACTCTGGGAGCCGATGTAGCAAGCCAGGTTGGGAGCAGTGTATGCTGGGAAGCAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041008.10 ENSMUST00000125842.8 |
||
| 3UTR CCA 72 bp | CGTGCAACATGGCTCCGCTTCCGAAATGCTGGGCAATaGAGAGGCCGCTCAGGCAGTAGCAAGTATGATAGA | + |
|
Preference number: 3 (lower is better) Translates to: RATWLRFRNAGQ*RGRSGSSKYDR Trigger: TCTATCATACTTGCTACTGCCTGAGCGGCCTCTCCATTGCCCAGCATTTCGGAAGCGGAGCCATGTTGCACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125842.8 |
||
| 3UTR CCA 72 bp | CCTGGGACTGGCTTCTGCAGAAAGTGTGTGGTGGCCTaGATCACCTTCTCAGGTCCAATGTTGTACACAGGG | + |
|
Preference number: 3 (lower is better) Translates to: PGTGFCRKCVVA*ITFSGPMLYTG Trigger: CCCTGTGTACAACATTGGACCTGAGAAGGTGATCCAGGCCACCACACACTTTCTGCAGAAGCCAGTCCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125842.8 |
||
| 3UTR GCA 72 bp | TGCAGAACGTTTTCGGGCACACCCATGACCATATCGTaGAACATGGCTCCGCTTCCGAAATGCTGGGCAATG | + |
|
Preference number: 3 (lower is better) Translates to: CRTFSGTPMTIS*NMAPLPKCWAM Trigger: CATTGCCCAGCATTTCGGAAGCGGAGCCATGTTGCACGATATGGTCATGGGTGTGCCCGAAAACGTTCTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125842.8 |
||
| 3UTR CCA 72 bp | CCTCGGAGAGGATGTGACTCGGTTTTCCCCAGGTTATaGGGAGGGCTCAATCTAAGAGCCTTCTTCATTCCC | + |
|
Preference number: 3 (lower is better) Translates to: PRRGCDSVFPRL*GGLNLRAFFIP Trigger: GGGAATGAAGAAGGCTCTTAGATTGAGCCCTCCCCATAACCTGGGGAAAACCGAGTCACATCCTCTCCGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
||
| 3UTR CCA 72 bp | CCTCAAAGCCTGGGACTGGCTTCTGCAGAAAGTGTGTaGTGGCCTGGATCACCTTCTCAGGTCCAATGTTGT | + |
|
Preference number: 3 (lower is better) Translates to: PQSLGLASAESV*WPGSPSQVQCC Trigger: ACAACATTGGACCTGAGAAGGTGATCCAGGCCACCACACACTTTCTGCAGAAGCCAGTCCCAGGCTTTGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125842.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGGTGCGCTGCTGCTTCCCAGCATACACTGCTCCCAACCTGGCTTGCTACATCGCTGATGGCTTTGTTTaGTTTGACAGGAAAGGACAA | + |
|
Preference number: 3 (lower is better) Translates to: GVRCCFPAYTAPNLACYIADGFV*FDRKGQ Trigger: TTGTCCTTTCCTGTCAAACAAAACAAAGCCATCAGC...GATGTAGCAAGCCAGGTTGGGAGCAGTGTATGCTGGGAAGCAGCAGCGCACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041008.10 ENSMUST00000125842.8 |
||
| 3UTR-3UTR CAA 90 bp | GATGTACTCCTGCAGCGCCTGCTGATGGAACATCCAATGGCTCATGCTGAGGGCCCAGAGCTGATGGCTTaGTTTTGTTTGACAGGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: DVLLQRLLMEHPMAHAEGPELMA*FCLTGK Trigger: CTTTCCTGTCAAACAAAACAAAGCCATCAGCTCTGG...GCCCTCAGCATGAGCCATTGGATGTTCCATCAGCAGGCGCTGCAGGAGTACATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125842.8 |
||
| 3UTR-3UTR CAA 90 bp | GTACACAGGGTGTGTGGGCTGCAGAACGTTTTCGGGCACACCCATGACCATATCATAGGCATCTGTCAGTaGTCGAAGGCCTCTTTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: VHRVCGLQNVFGHTHDHIIGICQ*SKASFQ Trigger: CTGAAAAGAGGCCTTCGACAACTGACAGATGCCTAT...GATATGGTCATGGGTGTGCCCGAAAACGTTCTGCAGCCCACACACCCTGTGTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125842.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCTTCCCAGCATACACTGCTCCCAACCTGGCTTGCTACATCGGCTCCCAGAGTGCTGATGGCTTTGTTTaGTTTGACAGGAAAGGACAA | + |
|
Preference number: 3 (lower is better) Translates to: CFPAYTAPNLACYIGSQSADGFV*FDRKGQ Trigger: TTGTCCTTTCCTGTCAAACAAAACAAAGCCATCAGC...ACTCTGGGAGCCGATGTAGCAAGCCAGGTTGGGAGCAGTGTATGCTGGGAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041008.10 ENSMUST00000125842.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGGTGCGCTGCTGCTTCCCAGCATACACTGCTCCCAACCTGGCTTGCTACATCTCCCAGAGTTTTGGCTaGACAGGTATGAAAATAATT | + |
|
Preference number: 3 (lower is better) Translates to: GVRCCFPAYTAPNLACYISQSFG*TGMKII Trigger: AATTATTTTCATACCTGTCAAGCCAAAACTCTGGGA...GATGTAGCAAGCCAGGTTGGGAGCAGTGTATGCTGGGAAGCAGCAGCGCACCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000041008.10 ENSMUST00000125842.8 |
||
| 3UTR CCA 72 bp | ACTGGGGTGAAAGAGACAAGCATAAATATGGCCTACTaGAGCCCAGTGCTCTCTTCCAGAGCTCGTATTGGC | + |
|
Preference number: 3 (lower is better) Translates to: TGVKETSINMAY*SPVLSSRARIG Trigger: GCCAATACGAGCTCTGGAAGAGAGCACTGGGCTCCAGTAGGCCATATTTATGCTTGTCTCTTTCACCCCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
||
| 3UTR CCA 72 bp | CTGAATGGTGTGTGTGGGTGGAGTCACAGCAGTGGCTaGGATGCAGATACTCACAGATATCTTCCATTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: LNGVCGWSHSSG*DADTHRYLPFQ Trigger: CTGAAATGGAAGATATCTGTGAGTATCTGCATCCCAGCCACTGCTGTGACTCCACCCACACACACCATTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041008.10 ENSMUST00000125842.8 |
||
| 3UTR-3UTR CAA 90 bp | GTCACAGCAGTGGCTGGGATGCAGATACTCACAGATATCTTCCATTTCAGCATTTTCTCAGGTCCAATGTaGTACACAGGGTGTGTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: VTAVAGMQILTDIFHFSIFSGPM*YTGCVG Trigger: GCCCACACACCCTGTGTACAACATTGGACCTGAGAA...AATGCTGAAATGGAAGATATCTGTGAGTATCTGCATCCCAGCCACTGCTGTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125842.8 |
||
| 3UTR CCA 72 bp | CTTCTTCATTCCCGACCCCTGTCCTTTGCAGATGACTaGGGTGAAAGAGACAAGCATAAATATGGCCTACTG | + |
|
Preference number: 3 (lower is better) Translates to: LLHSRPLSFADD*GERDKHKYGLL Trigger: CAGTAGGCCATATTTATGCTTGTCTCTTTCACCCCAGTCATCTGCAAAGGACAGGGGTCGGGAATGAAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
||
| 3UTR-3UTR CAA 90 bp | GAGTCACAGCAGTGGCTGGGATGCAGATACTCACAGATATCTTCCATTTCAGCACCAGAGCTGATGGCTTaGTTTTGTTTGACAGGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: ESQQWLGCRYSQISSISAPELMA*FCLTGK Trigger: CTTTCCTGTCAAACAAAACAAAGCCATCAGCTCTGG...TGCTGAAATGGAAGATATCTGTGAGTATCTGCATCCCAGCCACTGCTGTGACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041008.10 ENSMUST00000125842.8 |
||
| CDS-3UTR GCA 90 bp | GCTGTCCCGGCAGCAGCCAGCCTGCCTGGAGTGGACAGGGCGGGAACAAATCCTGGCTGCATAAGTGGGTaGGAGGTGTGGGTACTGACC | + |
|
Preference number: 4 (lower is better) Translates to: AVPAAASLPGVDRAGTNPGCISG*EVWVLT Trigger: GGTCAGTACCCACACCTCGCACCCACTTATGCAGCC...AGGATTTGTTCCCGCCCTGTCCACTCCAGGCAGGCTGGCTGCTGCCGGGACAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
||
| CDS-3UTR GCA 90 bp | TCTCTTCCAGAGCTCGTATTGGCTGGACCCACAGCCCCACCCTTGCACAGAGCTCTGGCACCCCACCAATaGCGCCTTCCCAGTTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SLPELVLAGPTAPPLHRALAPHQ*RLPSSG Trigger: GCCAGAACTGGGAAGGCGGCATTGGTGGGGTGCCAG...AGCTCTGTGCAAGGGTGGGGCTGTGGGTCCAGCCAATACGAGCTCTGGAAGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
||
| CDS-3UTR CCA 90 bp | CCCAGCATACACTGCTCCCAACCTGGCTTGCTACATCGGCTCCCAGAGTTTTGGGTGGGCTTCCATCCCTaGCACCCCACCAATGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: PSIHCSQPGLLHRLPEFWVGFHP*HPTNAA Trigger: GGCGGCATTGGTGGGGTGCCAGGGATGGAAGCCCAC...CCAAAACTCTGGGAGCCGATGTAGCAAGCCAGGTTGGGAGCAGTGTATGCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
||
| CDS-3UTR CCA 90 bp | GGGGTGCGCTGCTGCTTCCCAGCATACACTGCTCCCAACCTGGCTTGCTACATCCCGCTTCCGAAATGCTaGGCAATGGAGAGGCCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GVRCCFPAYTAPNLACYIPLPKC*AMERPL Trigger: GAGCGGCCTCTCCATTGCCCAGCATTTCGGAAGCGG...GATGTAGCAAGCCAGGTTGGGAGCAGTGTATGCTGGGAAGCAGCAGCGCACCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
||
| 3UTR CAA 72 bp | AGCACAGAGCGTGCTACACACCCAAATGGAGAAACCTaGTCTGACGGGGGAGCTGGGAGAGCCACGGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: STERATHPNGET*SDGGAGRATGS Trigger: GGACCCCGTGGCTCTCCCAGCTCCCCCGTCAGACAAGGTTTCTCCATTTGGGTGTGTAGCACGCTCTGTGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041008.10 ENSMUST00000125842.8 |
||
| 3UTR CAA 72 bp | CCTACTGGAGCCCAGTGCTCTCTTCCAGAGCTCGTATaGGCTGGACCCACAGCCCCACCCTTGCACAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PTGAQCSLPELV*AGPTAPPLHRA Trigger: AGCTCTGTGCAAGGGTGGGGCTGTGGGTCCAGCCAATACGAGCTCTGGAAGAGAGCACTGGGCTCCAGTAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
||
| CDS-3UTR TCA 90 bp | GGGTGCGCTGCTGCTTCCCAGCATACACTGCTCCCAACCTGGCTTGCTACATCGTCCAATGGCTCATGCTaGGGGCAGGGTCACCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GCAAASQHTLLPTWLATSSNGSC*GQGHLE Trigger: CTCAAGGTGACCCTGCCCTCAGCATGAGCCATTGGA...CGATGTAGCAAGCCAGGTTGGGAGCAGTGTATGCTGGGAAGCAGCAGCGCACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
||
| CDS-3UTR TCA 90 bp | CTACTGGAGCCCAGTGCTCTCTTCCAGAGCTCGTATTGGCTGGACCCACAGCCCTCCTGCAGCGCCTGCTaGTGGAACATCCAATGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLEPSALFQSSYWLDPQPSCSAC*WNIQWL Trigger: GAGCCATTGGATGTTCCATCAGCAGGCGCTGCAGGA...GGGCTGTGGGTCCAGCCAATACGAGCTCTGGAAGAGAGCACTGGGCTCCAGTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
||
| CDS-3UTR GCA 90 bp | TGCTTCCCAGCATACACTGCTCCCAACCTGGCTTGCTACATCGGCTCCCAGAGTCAGGGGCAGGAGCCCTaGCTGCCAGAAGGAGTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CFPAYTAPNLACYIGSQSQGQEP*LPEGVA Trigger: TGCTACTCCTTCTGGCAGGCAGGGCTCCTGCCCCTG...ACTCTGGGAGCCGATGTAGCAAGCCAGGTTGGGAGCAGTGTATGCTGGGAAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
||
| CDS-3UTR TCA 90 bp | TGCTTCCCAGCATACACTGCTCCCAACCTGGCTTGCTACATCGGCTCCCAGAGTTTGTTGCAGCGGCCCTaGAAGCCTCCTTCAAACCGC | + |
|
Preference number: 4 (lower is better) Translates to: CFPAYTAPNLACYIGSQSLLQRP*KPPSNR Trigger: GCGGTTTGAAGGAGGCTTTCAGGGCCGCTGCAACAA...ACTCTGGGAGCCGATGTAGCAAGCCAGGTTGGGAGCAGTGTATGCTGGGAAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
||
| CDS-3UTR GCA 90 bp | GGGGTGCGCTGCTGCTTCCCAGCATACACTGCTCCCAACCTGGCTTGCTACATCCCTTCAAACCGCATCTaGCGGCTTGTCACCCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: GVRCCFPAYTAPNLACYIPSNRI*RLVTHC Trigger: ACAATGGGTGACAAGCCGGCAGATGCGGTTTGAAGG...GATGTAGCAAGCCAGGTTGGGAGCAGTGTATGCTGGGAAGCAGCAGCGCACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
||
| CDS-3UTR GCA 90 bp | TCTCTTCCAGAGCTCGTATTGGCTGGACCCACAGCCCCACCCTTGCACAGAGCTCCCATGACCATATCGTaGAACATGGCTCCGCTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: SLPELVLAGPTAPPLHRAPMTIS*NMAPLP Trigger: CGGAAGCGGAGCCATGTTGCACGATATGGTCATGGG...AGCTCTGTGCAAGGGTGGGGCTGTGGGTCCAGCCAATACGAGCTCTGGAAGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
||
| CDS-3UTR CCA 90 bp | CCCGACCCCTGTCCTTTGCAGATGACTGGGGTGAAAGAGACAAGCATAAATATGAGTGGGTGCGAGGTGTaGGTACTGACCGGGGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: PDPCPLQMTGVKETSINMSGCEV*VLTGAP Trigger: GGGGGCCCCGGTCAGTACCCACACCTCGCACCCACT...CATATTTATGCTTGTCTCTTTCACCCCAGTCATCTGCAAAGGACAGGGGTCGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
||
| CDS-3UTR TCA 90 bp | GCTGTCCCGGCAGCAGCCAGCCTGCCTGGAGTGGACAGGGCGGGAACAAATCCTAGGGAGTACAAATACTaGAGGAGTTTCTCCCTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: AVPAAASLPGVDRAGTNPREYKY*RSFSLL Trigger: TAACAGGGAGAAACTCCTTCAGTATTTGTACTCCCT...AGGATTTGTTCCCGCCCTGTCCACTCCAGGCAGGCTGGCTGCTGCCGGGACAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
||
| CDS-3UTR GCA 90 bp | TGCTTCCCAGCATACACTGCTCCCAACCTGGCTTGCTACATCGGCTCCCAGAGTACAGGGTGTGTGGGCTaGAGAACGTTTTCGGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: CFPAYTAPNLACYIGSQSTGCVG*RTFSGT Trigger: TGTGCCCGAAAACGTTCTGCAGCCCACACACCCTGT...ACTCTGGGAGCCGATGTAGCAAGCCAGGTTGGGAGCAGTGTATGCTGGGAAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
||
| 3UTR CAA 72 bp | CTGCTGCTTCCCAGCATACACTGCTCCCAACCTGGCTaGCTACATCGGCTCCCAGAGTTTTGGCTTGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLLPSIHCSQPG*LHRLPEFWLDR Trigger: CCTGTCAAGCCAAAACTCTGGGAGCCGATGTAGCAAGCCAGGTTGGGAGCAGTGTATGCTGGGAAGCAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041008.10 ENSMUST00000125842.8 |
||
| CDS-3UTR GCA 90 bp | CCCAGCATACACTGCTCCCAACCTGGCTTGCTACATCGGCTCCCAGAGTTTTGGCTATCCATTCGGCCGTaGCTTCAAAGAGGTCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PSIHCSQPGLLHRLPEFWLSIRP*LQRGLE Trigger: CTCCAGACCTCTTTGAAGGCACGGCCGAATGGATAG...CCAAAACTCTGGGAGCCGATGTAGCAAGCCAGGTTGGGAGCAGTGTATGCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
||
| CDS-3UTR GCA 90 bp | TTTCCCCAGGTTATGGGGAGGGCTCAATCTAAGAGCCTTCTTCATTCCCGACCCCCTGGGACTGGCTTCTaGAGAAAGTGTGTGGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: FPQVMGRAQSKSLLHSRPPGTGF*RKCVVA Trigger: GGCCACCACACACTTTCTGCAGAAGCCAGTCCCAGG...GGGTCGGGAATGAAGAAGGCTCTTAGATTGAGCCCTCCCCATAACCTGGGGAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
||
| CDS-3UTR CCA 90 bp | TCTCTTCCAGAGCTCGTATTGGCTGGACCCACAGCCCCACCCTTGCACAGAGCTTCTGCAGAAAGTGTGTaGTGGCCTGGATCACCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLPELVLAGPTAPPLHRASAESV*WPGSPS Trigger: AGAAGGTGATCCAGGCCACCACACACTTTCTGCAGA...AGCTCTGTGCAAGGGTGGGGCTGTGGGTCCAGCCAATACGAGCTCTGGAAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
||
| CDS-3UTR TCA 90 bp | TCCCAGCATACACTGCTCCCAACCTGGCTTGCTACATCGGCTCCCAGAGTTTTGTGTGACTGTTTCCACTaGGTCGTCTTGCAACCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SQHTLLPTWLATSAPRVLCDCFH*VVLQPL Trigger: GAGCGGTTGCAAGACGACTCAGTGGAAACAGTCACA...CAAAACTCTGGGAGCCGATGTAGCAAGCCAGGTTGGGAGCAGTGTATGCTGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
||
| CDS-3UTR TCA 90 bp | TCTCTTCCAGAGCTCGTATTGGCTGGACCCACAGCCCCACCCTTGCACAGAGCTCCTGTTCTATGGATGTaGCTGTTTCCACTGAGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: SLPELVLAGPTAPPLHRAPVLWM*LFPLSR Trigger: ACGACTCAGTGGAAACAGTCACATCCATAGAACAGG...AGCTCTGTGCAAGGGTGGGGCTGTGGGTCCAGCCAATACGAGCTCTGGAAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
||
| CDS-3UTR CCA 90 bp | TCTCTTCCAGAGCTCGTATTGGCTGGACCCACAGCCCCACCCTTGCACAGAGCTGCCTTCAAAGAGGTCTaGAGTGATGATGTTGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SLPELVLAGPTAPPLHRAAFKEV*SDDVGE Trigger: CTCACCAACATCATCACTCCAGACCTCTTTGAAGGC...AGCTCTGTGCAAGGGTGGGGCTGTGGGTCCAGCCAATACGAGCTCTGGAAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
||
| CDS-3UTR CCA 90 bp | TCCCAGCATACACTGCTCCCAACCTGGCTTGCTACATCGGCTCCCAGAGTTTTGTGTACACAGGGTGTGTaGGCTGCAGAACGTTTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: SQHTLLPTWLATSAPRVLCTQGV*AAERFR Trigger: CCGAAAACGTTCTGCAGCCCACACACCCTGTGTACA...CAAAACTCTGGGAGCCGATGTAGCAAGCCAGGTTGGGAGCAGTGTATGCTGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
||
| 3UTR CAA 72 bp | GGCCCTGAAAGCCTCCTTCAAACCGCATCTGCCGGCTaGTCACCCATTGTAGCAAGCTCTTCAGGTTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GPESLLQTASAG*SPIVASSSGSK Trigger: CTTTGAACCTGAAGAGCTTGCTACAATGGGTGACAAGCCGGCAGATGCGGTTTGAAGGAGGCTTTCAGGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125842.8 |
||
| CDS-3UTR CCA 90 bp | GAGTCACAGCAGTGGCTGGGATGCAGATACTCACAGATATCTTCCATTTCAGCACCCCCGGCTGGACACTaGCAGCACATCAGGATGTAC | + |
|
Preference number: 4 (lower is better) Translates to: ESQQWLGCRYSQISSISAPPAGH*QHIRMY Trigger: GTACATCCTGATGTGCTGCCAGTGTCCAGCCGGGGG...TGCTGAAATGGAAGATATCTGTGAGTATCTGCATCCCAGCCACTGCTGTGACTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
||
| CDS-3UTR CCA 90 bp | ATGGGGAGGGCTCAATCTAAGAGCCTTCTTCATTCCCGACCCCTGTCCTTTGCAGCAGAAAGTGTGTGGTaGCCTGGATCACCTTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: MGRAQSKSLLHSRPLSFAAESVW*PGSPSQ Trigger: CTGAGAAGGTGATCCAGGCCACCACACACTTTCTGC...TGCAAAGGACAGGGGTCGGGAATGAAGAAGGCTCTTAGATTGAGCCCTCCCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
||
| CDS-3UTR CCA 90 bp | TCCCAGCATACACTGCTCCCAACCTGGCTTGCTACATCGGCTCCCAGAGTTTTGCTCAAAGCCTGGGACTaGCTTCTGCAGAAAGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SQHTLLPTWLATSAPRVLLKAWD*LLQKVC Trigger: ACACACTTTCTGCAGAAGCCAGTCCCAGGCTTTGAG...CAAAACTCTGGGAGCCGATGTAGCAAGCCAGGTTGGGAGCAGTGTATGCTGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
||
| CDS-3UTR CCA 90 bp | CCCAGCATACACTGCTCCCAACCTGGCTTGCTACATCGGCTCCCAGAGTTTTGGACATTCCTCAAAGCCTaGGACTGGCTTCTGCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: PSIHCSQPGLLHRLPEFWTFLKA*DWLLQK Trigger: TTTCTGCAGAAGCCAGTCCCAGGCTTTGAGGAATGT...CCAAAACTCTGGGAGCCGATGTAGCAAGCCAGGTTGGGAGCAGTGTATGCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
||
| CDS-3UTR TCA 90 bp | ATGGGGAGGGCTCAATCTAAGAGCCTTCTTCATTCCCGACCCCTGTCCTTTGCAACTATACAGCGGTTCTaGCCAAACAGGGGAGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: MGRAQSKSLLHSRPLSFATIQRF*PNRGGR Trigger: TCTTCCTCCCCTGTTTGGTCAGAACCGCTGTATAGT...TGCAAAGGACAGGGGTCGGGAATGAAGAAGGCTCTTAGATTGAGCCCTCCCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
||
| CDS-3UTR CCA 90 bp | CTGTCCTTTGCAGATGACTGGGGTGAAAGAGACAAGCATAAATATGGCCTACTGAGAGCCAGGGGCGGCTaGCATCCAGACACTCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSFADDWGERDKHKYGLLRARGG*HPDTHR Trigger: CCTATGAGTGTCTGGATGCCAGCCGCCCCTGGCTCT...CAGTAGGCCATATTTATGCTTGTCTCTTTCACCCCAGTCATCTGCAAAGGACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
||
| CDS-3UTR GCA 90 bp | TCCCAGCATACACTGCTCCCAACCTGGCTTGCTACATCGGCTCCCAGAGTTTTGAAAGAGCCGTCGGGTTaGTTTAGGGAGTACAAATAC | + |
|
Preference number: 4 (lower is better) Translates to: SQHTLLPTWLATSAPRVLKEPSG*FREYKY Trigger: GTATTTGTACTCCCTAAAGCAACCCGACGGCTCTTT...CAAAACTCTGGGAGCCGATGTAGCAAGCCAGGTTGGGAGCAGTGTATGCTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
||
| CDS-3UTR CCA 90 bp | GAGTCACAGCAGTGGCTGGGATGCAGATACTCACAGATATCTTCCATTTCAGCAACTGACACACGTCTGTaGCCACTATCTGGGGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: ESQQWLGCRYSQISSISATDTRL*PLSGGW Trigger: CCATCCCCCAGATAGTGGCCACAGACGTGTGTCAGT...TGCTGAAATGGAAGATATCTGTGAGTATCTGCATCCCAGCCACTGCTGTGACTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
||
| CDS-3UTR CCA 90 bp | GTCACAGCAGTGGCTGGGATGCAGATACTCACAGATATCTTCCATTTCAGCATTCGAAATGCTGGGCAATaGAGAGGCCGCTCAGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VTAVAGMQILTDIFHFSIRNAGQ*RGRSGS Trigger: ACTGCCTGAGCGGCCTCTCCATTGCCCAGCATTTCG...AATGCTGAAATGGAAGATATCTGTGAGTATCTGCATCCCAGCCACTGCTGTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
||
| CDS-3UTR TCA 90 bp | TTTCCCCAGGTTATGGGGAGGGCTCAATCTAAGAGCCTTCTTCATTCCCGACCCGAGGACAATAATAGGTaGAGGAACTCGAAGAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FPQVMGRAQSKSLLHSRPEDNNR*RNSKKP Trigger: TGGCTTCTTCGAGTTCCTTCACCTATTATTGTCCTC...GGGTCGGGAATGAAGAAGGCTCTTAGATTGAGCCCTCCCCATAACCTGGGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
||
| CDS-3UTR TCA 90 bp | CCCGACCCCTGTCCTTTGCAGATGACTGGGGTGAAAGAGACAAGCATAAATATGTCTCCCTCTGCAAAATaGGCCTTGGTACAAGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PDPCPLQMTGVKETSINMSPSAK*ALVQGG Trigger: ACCACCTTGTACCAAGGCTCATTTTGCAGAGGGAGA...CATATTTATGCTTGTCTCTTTCACCCCAGTCATCTGCAAAGGACAGGGGTCGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
||
| CDS-3UTR CCA 90 bp | TCCCAGCATACACTGCTCCCAACCTGGCTTGCTACATCGGCTCCCAGAGTTTTGGAACTGAAGACCTCCTaGATCTTCTCTTCTACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SQHTLLPTWLATSAPRVLELKTS*IFSSTL Trigger: CAAAGTAGAAGAGAAGATCCAGGAGGTCTTCAGTTC...CAAAACTCTGGGAGCCGATGTAGCAAGCCAGGTTGGGAGCAGTGTATGCTGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041008.10 ENSMUST00000125842.8 |
||
| CDS-3UTR CCA 90 bp | GTCACAGCAGTGGCTGGGATGCAGATACTCACAGATATCTTCCATTTCAGCATTCCACTATCTGGGGGATaGGTTCGTCAAGGAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VTAVAGMQILTDIFHFSIPLSGG*VRQGAP Trigger: TGGAGCTCCTTGACGAACCCATCCCCCAGATAGTGG...AATGCTGAAATGGAAGATATCTGTGAGTATCTGCATCCCAGCCACTGCTGTGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
||
| CDS-3UTR CCA 90 bp | GTCACAGCAGTGGCTGGGATGCAGATACTCACAGATATCTTCCATTTCAGCATTTCTGTGGCCACTATCTaGGGGATGGGTTCGTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VTAVAGMQILTDIFHFSISVATI*GMGSSR Trigger: CCTTGACGAACCCATCCCCCAGATAGTGGCCACAGA...AATGCTGAAATGGAAGATATCTGTGAGTATCTGCATCCCAGCCACTGCTGTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
||
| CDS-3UTR TCA 90 bp | CTGTCCTTTGCAGATGACTGGGGTGAAAGAGACAAGCATAAATATGGCCTACTGTTTCGGGCACACCCATaGCCATATCGTGCAACATGG | + |
|
Preference number: 4 (lower is better) Translates to: LSFADDWGERDKHKYGLLFRAHP*PYRATW Trigger: CCATGTTGCACGATATGGTCATGGGTGTGCCCGAAA...CAGTAGGCCATATTTATGCTTGTCTCTTTCACCCCAGTCATCTGCAAAGGACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
||
| CDS-3UTR GCA 90 bp | CCCGACCCCTGTCCTTTGCAGATGACTGGGGTGAAAGAGACAAGCATAAATATGAAGTGCTTCTCCCTCTaGAAAATGAGCCTTGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: PDPCPLQMTGVKETSINMKCFSL*KMSLGT Trigger: TGTACCAAGGCTCATTTTGCAGAGGGAGAAGCACTT...CATATTTATGCTTGTCTCTTTCACCCCAGTCATCTGCAAAGGACAGGGGTCGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
||
| CDS-3UTR CCA 90 bp | ACCTTCTCAGGTCCAATGTTGTACACAGGGTGTGTGGGCTGCAGAACGTTTTCGGAACTGAAGACCTCCTaGATCTTCTCTTCTACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TFSGPMLYTGCVGCRTFSELKTS*IFSSTL Trigger: CAAAGTAGAAGAGAAGATCCAGGAGGTCTTCAGTTC...CGAAAACGTTCTGCAGCCCACACACCCTGTGTACAACATTGGACCTGAGAAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125842.8 |
||
| 3UTR CAA 72 bp | CACCGTGTATTCCAACCCAGAGCTGATGGCTTTGTTTaGTTTGACAGGAAAGGACAAAGAAACCACAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: HRVFQPRADGFV*FDRKGQRNHNS Trigger: GGAGTTGTGGTTTCTTTGTCCTTTCCTGTCAAACAAAACAAAGCCATCAGCTCTGGGTTGGAATACACGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041008.10 ENSMUST00000125842.8 |
||
| 3UTR CAA 72 bp | AATCTAAGAGCCTTCTTCATTCCCGACCCCTGTCCTTaGCAGATGACTGGGGTGAAAGAGACAAGCATAAAT | + |
|
Preference number: 4 (lower is better) Translates to: NLRAFFIPDPCP*QMTGVKETSIN Trigger: ATTTATGCTTGTCTCTTTCACCCCAGTCATCTGCAAAGGACAGGGGTCGGGAATGAAGAAGGCTCTTAGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
||
| CDS-3UTR CCA 90 bp | CTGTCCTTTGCAGATGACTGGGGTGAAAGAGACAAGCATAAATATGGCCTACTGCTGCAAAATGAGCCTTaGTACAAGGTGGTTAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: LSFADDWGERDKHKYGLLLQNEP*YKVVKL Trigger: AAGTTTAACCACCTTGTACCAAGGCTCATTTTGCAG...CAGTAGGCCATATTTATGCTTGTCTCTTTCACCCCAGTCATCTGCAAAGGACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
||
| CDS-3UTR CAA 90 bp | GCTGTCCCGGCAGCAGCCAGCCTGCCTGGAGTGGACAGGGCGGGAACAAATCCTATAGGCATCTGTCAGTaGTCGAAGGCCTCTTTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: AVPAAASLPGVDRAGTNPIGICQ*SKASFQ Trigger: CTGAAAAGAGGCCTTCGACAACTGACAGATGCCTAT...AGGATTTGTTCCCGCCCTGTCCACTCCAGGCAGGCTGGCTGCTGCCGGGACAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
||
| CDS-3UTR CAA 90 bp | TGCTTCCCAGCATACACTGCTCCCAACCTGGCTTGCTACATCGGCTCCCAGAGTACCGCATCTGCCGGCTaGTCACCCATTGTAGCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: CFPAYTAPNLACYIGSQSTASAG*SPIVAS Trigger: GCTTGCTACAATGGGTGACAAGCCGGCAGATGCGGT...ACTCTGGGAGCCGATGTAGCAAGCCAGGTTGGGAGCAGTGTATGCTGGGAAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
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| CDS GCA 90 bp | GATGTGACTGTTTCCACTGAGTCGTCTTGCAACCGCTCCCGCACGTaGTCAGGTCTCAGACTATACAGCGGTTCTGACCAAACAGGGGAG | + |
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Preference number: 5 (lower is better) Translates to: DVTVSTESSCNRSRT*SGLRLYSGSDQTGE Trigger: CTCCCCTGTTTGGTCAGAACCGCTGTATAGTCTGAGACCTGAGCACGTGCGGGAGCGGTTGCAAGACGACTCAGTGGAAACAGTCACATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
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| CDS TCA 90 bp | CAACCGCTCCCGCACGTGCTCAGGTCTCAGACTATACAGCGGTTCTaGCCAAACAGGGGAGGAAGATGGAGGACAATAATAGGTGAAGGA | + |
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Preference number: 5 (lower is better) Translates to: QPLPHVLRSQTIQRF*PNRGGRWRTIIGEG Trigger: TCCTTCACCTATTATTGTCCTCCATCTTCCTCCCCTGTTTGGTCAGAACCGCTGTATAGTCTGAGACCTGAGCACGTGCGGGAGCGGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
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| CDS GCA 90 bp | ACTTTGGCCTGTTCTATGGATGTGACTGTTTCCACTGAGTCGTCTTaGAACCGCTCCCGCACGTGCTCAGGTCTCAGACTATACAGCGGT | + |
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Preference number: 5 (lower is better) Translates to: TLACSMDVTVSTESS*NRSRTCSGLRLYSG Trigger: ACCGCTGTATAGTCTGAGACCTGAGCACGTGCGGGAGCGGTTGCAAGACGACTCAGTGGAAACAGTCACATCCATAGAACAGGCCAAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
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| CDS-3UTR CAA 90 bp | TTTCCCCAGGTTATGGGGAGGGCTCAATCTAAGAGCCTTCTTCATTCCCGACCCTTCTCAGGTCCAATGTaGTACACAGGGTGTGTGGGC | + |
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Preference number: 5 (lower is better) Translates to: FPQVMGRAQSKSLLHSRPFSGPM*YTGCVG Trigger: GCCCACACACCCTGTGTACAACATTGGACCTGAGAA...GGGTCGGGAATGAAGAAGGCTCTTAGATTGAGCCCTCCCCATAACCTGGGGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
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| CDS-3UTR CAA 90 bp | GTCACAGCAGTGGCTGGGATGCAGATACTCACAGATATCTTCCATTTCAGCATTATCTTCTCTTCTACTTaGGCCTGTTCTATGGATGTG | + |
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Preference number: 5 (lower is better) Translates to: VTAVAGMQILTDIFHFSIIFSST*ACSMDV Trigger: CACATCCATAGAACAGGCCAAAGTAGAAGAGAAGAT...AATGCTGAAATGGAAGATATCTGTGAGTATCTGCATCCCAGCCACTGCTGTGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
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| CDS GCA 72 bp | GTTTCCACTGAGTCGTCTTGCAACCGCTCCCGCACGTaGTCAGGTCTCAGACTATACAGCGGTTCTGACCAA | + |
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Preference number: 6 (lower is better) Translates to: VSTESSCNRSRT*SGLRLYSGSDQ Trigger: TTGGTCAGAACCGCTGTATAGTCTGAGACCTGAGCACGTGCGGGAGCGGTTGCAAGACGACTCAGTGGAAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
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| CDS GCA 72 bp | TGTTCTATGGATGTGACTGTTTCCACTGAGTCGTCTTaGAACCGCTCCCGCACGTGCTCAGGTCTCAGACTA | + |
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Preference number: 6 (lower is better) Translates to: CSMDVTVSTESS*NRSRTCSGLRL Trigger: TAGTCTGAGACCTGAGCACGTGCGGGAGCGGTTGCAAGACGACTCAGTGGAAACAGTCACATCCATAGAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
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| CDS TCA 72 bp | CCGCACGTGCTCAGGTCTCAGACTATACAGCGGTTCTaGCCAAACAGGGGAGGAAGATGGAGGACAATAATA | + |
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Preference number: 6 (lower is better) Translates to: PHVLRSQTIQRF*PNRGGRWRTII Trigger: TATTATTGTCCTCCATCTTCCTCCCCTGTTTGGTCAGAACCGCTGTATAGTCTGAGACCTGAGCACGTGCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041008.10 |
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