RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FNIP2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000061175

Ensembl transcript IDs: ENSMUST00000076136.7, ENSMUST00000133154.7, ENSMUST00000239298.2

Found 376 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCCCAGTGCCAGACTACGTCCTCCAAAATACCCGGCAGGACAGGGTaGTACACTGAGTCCCTCGCAGACCTGCAGGTGGCTGTGCTGAGT +
Preference number: 1 (lower is better)
Translates to: SQCQTTSSKIPGRTG*YTESLADLQVAVLS
Trigger: ACTCAGCACAGCCACCTGCAGGTCTGCGAGGGACTCAGTGTAGCACCCTGTCCTGCCGGGTATTTTGGAGGACGTAGTCTGGCACTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
3UTR CCA 90 bp TTCGGGCTGCCTGCTATCCTTATCAGAGCAAGTCCACTCCCCAGCTaGCAGCGGCCCCATACAGCACAAACAGACATCTGCACAGCCGGC +
Preference number: 1 (lower is better)
Translates to: FGLPAILIRASPLPS*QRPHTAQTDICTAG
Trigger: GCCGGCTGTGCAGATGTCTGTTTGTGCTGTATGGGGCCGCTGCCAGCTGGGGAGTGGACTTGCTCTGATAAGGATAGCAGGCAGCCCGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
3UTR TCA 90 bp CCAGACTACGTCCTCCAAAATACCCGGCAGGACAGGGTGCTACACTaGGTCCCTCGCAGACCTGCAGGTGGCTGTGCTGAGTCTACAGGA +
Preference number: 1 (lower is better)
Translates to: PDYVLQNTRQDRVLH*VPRRPAGGCAESTG
Trigger: TCCTGTAGACTCAGCACAGCCACCTGCAGGTCTGCGAGGGACTCAGTGTAGCACCCTGTCCTGCCGGGTATTTTGGAGGACGTAGTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
3UTR GCA 90 bp TTACAGGACACTGAGACACTTCTGCTCGGCTGTGCCTCGCCAGCCTaGTTGGTCAGACAAGCAGAGCGCTGCCCAGTGACACCTAACAGG +
Preference number: 1 (lower is better)
Translates to: LQDTETLLLGCASPA*LVRQAERCPVTPNR
Trigger: CCTGTTAGGTGTCACTGGGCAGCGCTCTGCTTGTCTGACCAAGCAGGCTGGCGAGGCACAGCCGAGCAGAAGTGTCTCAGTGTCCTGTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
3UTR CCA 90 bp TTATGCCAGCGAATGTCAGGTAGGGCAGTTAAAGGTCACACAAACTaGCTCGGAGGCACTGCAATGGGCTCGGGGACGTGTCTCCTGACA +
Preference number: 1 (lower is better)
Translates to: LCQRMSGRAVKGHTN*LGGTAMGSGTCLLT
Trigger: TGTCAGGAGACACGTCCCCGAGCCCATTGCAGTGCCTCCGAGCCAGTTTGTGTGACCTTTAACTGCCCTACCTGACATTCGCTGGCATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
3UTR CCA 90 bp TGGATCAGGATTTGCTGTCCCACATTCTCAGGCACCAGGGACTGGTaGGAAGGACTGAGGAGCCCACAGGGTTTGACTTTACTTGACTGG +
Preference number: 1 (lower is better)
Translates to: WIRICCPTFSGTRDW*EGLRSPQGLTLLDW
Trigger: CCAGTCAAGTAAAGTCAAACCCTGTGGGCTCCTCAGTCCTTCCCACCAGTCCCTGGTGCCTGAGAATGTGGGACAGCAAATCCTGATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
3UTR CCA 90 bp ACATGGATCAGGATTTGCTGTCCCACATTCTCAGGCACCAGGGACTaGTGGGAAGGACTGAGGAGCCCACAGGGTTTGACTTTACTTGAC +
Preference number: 1 (lower is better)
Translates to: TWIRICCPTFSGTRD*WEGLRSPQGLTLLD
Trigger: GTCAAGTAAAGTCAAACCCTGTGGGCTCCTCAGTCCTTCCCACCAGTCCCTGGTGCCTGAGAATGTGGGACAGCAAATCCTGATCCATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
3UTR CCA 90 bp TCAATAGGCAACCCTCTTCCACATCCTATGTCCAACAGTAGCTGCTaGAGCTCCAGGCTGACAGTGGCACAACATGGCTTTCTTCAGGTC +
Preference number: 1 (lower is better)
Translates to: SIGNPLPHPMSNSSC*SSRLTVAQHGFLQV
Trigger: GACCTGAAGAAAGCCATGTTGTGCCACTGTCAGCCTGGAGCTCCAGCAGCTACTGTTGGACATAGGATGTGGAAGAGGGTTGCCTATTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
3UTR GCA 90 bp TTCTCAATAGGCAACCCTCTTCCACATCCTATGTCCAACAGTAGCTaGTGGAGCTCCAGGCTGACAGTGGCACAACATGGCTTTCTTCAG +
Preference number: 1 (lower is better)
Translates to: FSIGNPLPHPMSNSS*WSSRLTVAQHGFLQ
Trigger: CTGAAGAAAGCCATGTTGTGCCACTGTCAGCCTGGAGCTCCAGCAGCTACTGTTGGACATAGGATGTGGAAGAGGGTTGCCTATTGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
3UTR TCA 90 bp CTCTTCCACATCCTATGTCCAACAGTAGCTGCTGGAGCTCCAGGCTaGCAGTGGCACAACATGGCTTTCTTCAGGTCAATGTTCGTAGAA +
Preference number: 1 (lower is better)
Translates to: LFHILCPTVAAGAPG*QWHNMAFFRSMFVE
Trigger: TTCTACGAACATTGACCTGAAGAAAGCCATGTTGTGCCACTGTCAGCCTGGAGCTCCAGCAGCTACTGTTGGACATAGGATGTGGAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
3UTR TCA 90 bp TCAACATGTCACTACATCTGCACGAGGACCAAACTGATTCTGTACTaGGCTATTTTCTCCCAATCCTCAGGAGCTGGTGAGGCCGAGTCC +
Preference number: 1 (lower is better)
Translates to: STCHYICTRTKLILY*AIFSQSSGAGEAES
Trigger: GGACTCGGCCTCACCAGCTCCTGAGGATTGGGAGAAAATAGCTCAGTACAGAATCAGTTTGGTCCTCGTGCAGATGTAGTGACATGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
3UTR CCA 90 bp AACTCTTCATGCTCTCTCACGCTTGAACAGGAAACACTTTCCTTCTaGAATGTTCTAGACATTGGTTACCCACTACTCAGAGTCAGCCCT +
Preference number: 1 (lower is better)
Translates to: NSSCSLTLEQETLSF*NVLDIGYPLLRVSP
Trigger: AGGGCTGACTCTGAGTAGTGGGTAACCAATGTCTAGAACATTCCAGAAGGAAAGTGTTTCCTGTTCAAGCGTGAGAGAGCATGAAGAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
3UTR-3UTR CCA 90 bp TGCAATGGGCTCGGGGACGTGTCTCCTGACATCTCCGGTCCCAAAGCTCACCAGAGTCCACTCCCCAGCTaGCAGCGGCCCCATACAGCA +
Preference number: 2 (lower is better)
Translates to: CNGLGDVSPDISGPKAHQSPLPS*QRPHTA
Trigger: TGCTGTATGGGGCCGCTGCCAGCTGGGGAGTGGACT...CTGGTGAGCTTTGGGACCGGAGATGTCAGGAGACACGTCCCCGAGCCCATTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
3UTR-3UTR TCA 90 bp TGCAATGGGCTCGGGGACGTGTCTCCTGACATCTCCGGTCCCAAAGCTCACCAGCGGACTCTTCGGCTATaGCAGAATGACAGCATCCGC +
Preference number: 2 (lower is better)
Translates to: CNGLGDVSPDISGPKAHQRTLRL*QNDSIR
Trigger: GCGGATGCTGTCATTCTGTCATAGCCGAAGAGTCCG...CTGGTGAGCTTTGGGACCGGAGATGTCAGGAGACACGTCCCCGAGCCCATTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
3UTR-3UTR TCA 90 bp TGCAATGGGCTCGGGGACGTGTCTCCTGACATCTCCGGTCCCAAAGCTCACCAGCCACAGAAGATCGCCTaGGCTCATGGAAACAACTTT +
Preference number: 2 (lower is better)
Translates to: CNGLGDVSPDISGPKAHQPQKIA*AHGNNF
Trigger: AAAGTTGTTTCCATGAGCTCAGGCGATCTTCTGTGG...CTGGTGAGCTTTGGGACCGGAGATGTCAGGAGACACGTCCCCGAGCCCATTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
3UTR-3UTR GCA 90 bp TGCAATGGGCTCGGGGACGTGTCTCCTGACATCTCCGGTCCCAAAGCTCACCAGACATGGATCAGGATTTaGTGTCCCACATTCTCAGGC +
Preference number: 2 (lower is better)
Translates to: CNGLGDVSPDISGPKAHQTWIRI*CPTFSG
Trigger: GCCTGAGAATGTGGGACAGCAAATCCTGATCCATGT...CTGGTGAGCTTTGGGACCGGAGATGTCAGGAGACACGTCCCCGAGCCCATTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
3UTR-3UTR GCA 90 bp TGCAATGGGCTCGGGGACGTGTCTCCTGACATCTCCGGTCCCAAAGCTCACCAGCACAGGTCCATGAGATaGTTTGTTTACTGTTTTCCC +
Preference number: 2 (lower is better)
Translates to: CNGLGDVSPDISGPKAHQHRSMR*FVYCFP
Trigger: GGGAAAACAGTAAACAAAGCATCTCATGGACCTGTG...CTGGTGAGCTTTGGGACCGGAGATGTCAGGAGACACGTCCCCGAGCCCATTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
3UTR-3UTR CCA 90 bp TCAGGAGCTGGTGAGGCCGAGTCCATGTGTAAACGAGAGAAGCCAGGAGAAAGAACATGTGGGGCTCCCTaGCAAACAATGGTACCATGG +
Preference number: 2 (lower is better)
Translates to: SGAGEAESMCKREKPGERTCGAP*QTMVPW
Trigger: CCATGGTACCATTGTTTGCCAGGGAGCCCCACATGT...TCTTTCTCCTGGCTTCTCTCGTTTACACATGGACTCGGCCTCACCAGCTCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
3UTR-3UTR CCA 90 bp TGCAATGGGCTCGGGGACGTGTCTCCTGACATCTCCGGTCCCAAAGCTCACCAGCTTTCTTTTGATTCCTaGGAGACAATGTCGACTGTT +
Preference number: 2 (lower is better)
Translates to: CNGLGDVSPDISGPKAHQLSFDS*ETMSTV
Trigger: AACAGTCGACATTGTCTCCCAGGAATCAAAAGAAAG...CTGGTGAGCTTTGGGACCGGAGATGTCAGGAGACACGTCCCCGAGCCCATTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
3UTR-3UTR TCA 90 bp GCTCCCTGGCAAACAATGGTACCATGGAGCCAGGAAATGGAAAACAGCAAACAAGGAAGCTCTGAGAAGTaGCAACCGTGGGTTTCTGGA +
Preference number: 2 (lower is better)
Translates to: APWQTMVPWSQEMENSKQGSSEK*QPWVSG
Trigger: TCCAGAAACCCACGGTTGTCACTTCTCAGAGCTTCC...TTGTTTGCTGTTTTCCATTTCCTGGCTCCATGGTACCATTGTTTGCCAGGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
3UTR-3UTR TCA 90 bp ATTGGTTACCCACTACTCAGAGTCAGCCCTCAGTATTCTACCCAACAGCATGGGAATGTCGACTGTTCCTaGACAATCACAAACTCCCAC +
Preference number: 2 (lower is better)
Translates to: IGYPLLRVSPQYSTQQHGNVDCS*TITNSH
Trigger: GTGGGAGTTTGTGATTGTTCAGGAACAGTCGACATT...CCCATGCTGTTGGGTAGAATACTGAGGGCTGACTCTGAGTAGTGGGTAACCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
3UTR-3UTR GCA 90 bp ATTGGTTACCCACTACTCAGAGTCAGCCCTCAGTATTCTACCCAACAGCATGGGCTTACACTTCCCTCCTaGCAGAAAGGTTACTTTCTT +
Preference number: 2 (lower is better)
Translates to: IGYPLLRVSPQYSTQQHGLTLPS*QKGYFL
Trigger: AAGAAAGTAACCTTTCTGGCAGGAGGGAAGTGTAAG...CCCATGCTGTTGGGTAGAATACTGAGGGCTGACTCTGAGTAGTGGGTAACCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
3UTR-3UTR GCA 90 bp CACCTTTTCGGACTCTTCGGCTATGACAGAATGACAGCATCCGCGTCAGCACAGAAAACAGCAAACAAATaGCAGGTGATAGAAAGTGGA +
Preference number: 2 (lower is better)
Translates to: HLFGLFGYDRMTASASAQKTANK*QVIESG
Trigger: TCCACTTTCTATCACCTGGCATTTGTTTGCTGTTTT...CTGTGCTGACGCGGATGCTGTCATTCTGTCATAGCCGAAGAGTCCGAAAAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
3UTR-3UTR TCA 90 bp GTAATGAGGAGACAGACATGTCACATGGATCAGGATTTGCTGTCCCACATTCTCATGCTCTCTCACGCTTaGACAGGAAACACTTTCCTT +
Preference number: 2 (lower is better)
Translates to: VMRRQTCHMDQDLLSHILMLSHA*TGNTFL
Trigger: AAGGAAAGTGTTTCCTGTTCAAGCGTGAGAGAGCAT...GAGAATGTGGGACAGCAAATCCTGATCCATGTGACATGTCTGTCTCCTCATTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
3UTR-3UTR TCA 90 bp CTAGACATTGGTTACCCACTACTCAGAGTCAGCCCTCAGTATTCTACCCAACAGAAGGTTACTTTCTTTTaGTTCCTGGGAGACAATGTC +
Preference number: 2 (lower is better)
Translates to: LDIGYPLLRVSPQYSTQQKVTFF*FLGDNV
Trigger: GACATTGTCTCCCAGGAATCAAAAGAAAGTAACCTT...CTGTTGGGTAGAATACTGAGGGCTGACTCTGAGTAGTGGGTAACCAATGTCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
3UTR-3UTR TCA 90 bp GAAACACTTTCCTTCTGGAATGTTCTAGACATTGGTTACCCACTACTCAGAGTCCACGTCTGTCTAGTTTaGCAGTGTTGCTTACACTTC +
Preference number: 2 (lower is better)
Translates to: ETLSFWNVLDIGYPLLRVHVCLV*QCCLHF
Trigger: GAAGTGTAAGCAACACTGTCAAACTAGACAGACGTG...GACTCTGAGTAGTGGGTAACCAATGTCTAGAACATTCCAGAAGGAAAGTGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
3UTR-3UTR GCA 90 bp GAAACACTTTCCTTCTGGAATGTTCTAGACATTGGTTACCCACTACTCAGAGTCCTTACACTTCCCTCCTaGCAGAAAGGTTACTTTCTT +
Preference number: 2 (lower is better)
Translates to: ETLSFWNVLDIGYPLLRVLTLPS*QKGYFL
Trigger: AAGAAAGTAACCTTTCTGGCAGGAGGGAAGTGTAAG...GACTCTGAGTAGTGGGTAACCAATGTCTAGAACATTCCAGAAGGAAAGTGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
3UTR-3UTR CCA 90 bp AGAATGACAGCATCCGCGTCAGCACAGGTCCATGAGATGCTTTGTTTACTGTTTGGTAAAAGGTCTTTCTaGAGAAGGCTAAAGATACTA +
Preference number: 2 (lower is better)
Translates to: RMTASASAQVHEMLCLLFGKRSF*RRLKIL
Trigger: TAGTATCTTTAGCCTTCTCCAGAAAGACCTTTTACC...AAACAGTAAACAAAGCATCTCATGGACCTGTGCTGACGCGGATGCTGTCATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
3UTR-3UTR CCA 90 bp GAAACACTTTCCTTCTGGAATGTTCTAGACATTGGTTACCCACTACTCAGAGTCCTTTCTTTTGATTCCTaGGAGACAATGTCGACTGTT +
Preference number: 2 (lower is better)
Translates to: ETLSFWNVLDIGYPLLRVLSFDS*ETMSTV
Trigger: AACAGTCGACATTGTCTCCCAGGAATCAAAAGAAAG...GACTCTGAGTAGTGGGTAACCAATGTCTAGAACATTCCAGAAGGAAAGTGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
3UTR-3UTR CCA 90 bp TCAGTTGGGTTTTTACAGTTCGTCACTTTGGTAAGTTTTACAAATGGTCAAGTTGACAGTGGCACAACATaGCTTTCTTCAGGTCAATGT +
Preference number: 2 (lower is better)
Translates to: SVGFLQFVTLVSFTNGQVDSGTT*LSSGQC
Trigger: ACATTGACCTGAAGAAAGCCATGTTGTGCCACTGTC...AACTTGACCATTTGTAAAACTTACCAAAGTGACGAACTGTAAAAACCCAACTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
3UTR GCA 72 bp ACTGAGACACTTCTGCTCGGCTGTGCCTCGCCAGCCTaGTTGGTCAGACAAGCAGAGCGCTGCCCAGTGACA +
Preference number: 3 (lower is better)
Translates to: TETLLLGCASPA*LVRQAERCPVT
Trigger: TGTCACTGGGCAGCGCTCTGCTTGTCTGACCAAGCAGGCTGGCGAGGCACAGCCGAGCAGAAGTGTCTCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
3UTR GCA 72 bp CAGACTACGTCCTCCAAAATACCCGGCAGGACAGGGTaGTACACTGAGTCCCTCGCAGACCTGCAGGTGGCT +
Preference number: 3 (lower is better)
Translates to: QTTSSKIPGRTG*YTESLADLQVA
Trigger: AGCCACCTGCAGGTCTGCGAGGGACTCAGTGTAGCACCCTGTCCTGCCGGGTATTTTGGAGGACGTAGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
3UTR TCA 72 bp GGAGCCAGGAGAAGAGCAGCGCATCTTTCTTGCAAGTaGTGGTGGGGCGCTGAGATAACCCACGTGAGCCCA +
Preference number: 3 (lower is better)
Translates to: GARRRAAHLSCK*WWGAEITHVSP
Trigger: TGGGCTCACGTGGGTTATCTCAGCGCCCCACCATCACTTGCAAGAAAGATGCGCTGCTCTTCTCCTGGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
3UTR GCA 72 bp GGCAACCCTCTTCCACATCCTATGTCCAACAGTAGCTaGTGGAGCTCCAGGCTGACAGTGGCACAACATGGC +
Preference number: 3 (lower is better)
Translates to: GNPLPHPMSNSS*WSSRLTVAQHG
Trigger: GCCATGTTGTGCCACTGTCAGCCTGGAGCTCCAGCAGCTACTGTTGGACATAGGATGTGGAAGAGGGTTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
3UTR CCA 72 bp CCTGCTATCCTTATCAGAGCAAGTCCACTCCCCAGCTaGCAGCGGCCCCATACAGCACAAACAGACATCTGC +
Preference number: 3 (lower is better)
Translates to: PAILIRASPLPS*QRPHTAQTDIC
Trigger: GCAGATGTCTGTTTGTGCTGTATGGGGCCGCTGCCAGCTGGGGAGTGGACTTGCTCTGATAAGGATAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
3UTR CCA 72 bp AGGATTTGCTGTCCCACATTCTCAGGCACCAGGGACTaGTGGGAAGGACTGAGGAGCCCACAGGGTTTGACT +
Preference number: 3 (lower is better)
Translates to: RICCPTFSGTRD*WEGLRSPQGLT
Trigger: AGTCAAACCCTGTGGGCTCCTCAGTCCTTCCCACCAGTCCCTGGTGCCTGAGAATGTGGGACAGCAAATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
3UTR CCA 72 bp GCATTGACAGCTCAGCGGGCCACATGTGGGGCTCCCTaGCAAACAATGGTACCATGGAGCCAGGAAATGGAA +
Preference number: 3 (lower is better)
Translates to: ALTAQRATCGAP*QTMVPWSQEME
Trigger: TTCCATTTCCTGGCTCCATGGTACCATTGTTTGCCAGGGAGCCCCACATGTGGCCCGCTGAGCTGTCAATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
3UTR CCA 72 bp CGAATGTCAGGTAGGGCAGTTAAAGGTCACACAAACTaGCTCGGAGGCACTGCAATGGGCTCGGGGACGTGT +
Preference number: 3 (lower is better)
Translates to: RMSGRAVKGHTN*LGGTAMGSGTC
Trigger: ACACGTCCCCGAGCCCATTGCAGTGCCTCCGAGCCAGTTTGTGTGACCTTTAACTGCCCTACCTGACATTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
3UTR TCA 72 bp AGCAGCGCATCTTTCTTGCAAGTGATGGTGGGGCGCTaGGATAACCCACGTGAGCCCAGGGTTTCCCACTTT +
Preference number: 3 (lower is better)
Translates to: SSASFLQVMVGR*DNPREPRVSHF
Trigger: AAAGTGGGAAACCCTGGGCTCACGTGGGTTATCTCAGCGCCCCACCATCACTTGCAAGAAAGATGCGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
3UTR CCA 72 bp CTCAGCGGGCCACATGTGGGGCTCCCTGGCAAACAATaGTACCATGGAGCCAGGAAATGGAAAACAGCAAAC +
Preference number: 3 (lower is better)
Translates to: LSGPHVGLPGKQ*YHGARKWKTAN
Trigger: GTTTGCTGTTTTCCATTTCCTGGCTCCATGGTACCATTGTTTGCCAGGGAGCCCCACATGTGGCCCGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
3UTR TCA 72 bp TGGGACACCTTTTCGGACTCTTCGGCTATGACAGAATaGCAGCATCCGCGTCAGCACAGGTCCATGAGATGC +
Preference number: 3 (lower is better)
Translates to: WDTFSDSSAMTE*QHPRQHRSMRC
Trigger: GCATCTCATGGACCTGTGCTGACGCGGATGCTGTCATTCTGTCATAGCCGAAGAGTCCGAAAAGGTGTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
3UTR TCA 72 bp AACTGCAACATGCTAGAAGAGGTCATTACAGGACACTaGGACACTTCTGCTCGGCTGTGCCTCGCCAGCCTG +
Preference number: 3 (lower is better)
Translates to: NCNMLEEVITGH*DTSARLCLASL
Trigger: CAGGCTGGCGAGGCACAGCCGAGCAGAAGTGTCTCAGTGTCCTGTAATGACCTCTTCTAGCATGTTGCAGTT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
3UTR CCA 72 bp ATTTGCTGTCCCACATTCTCAGGCACCAGGGACTGGTaGGAAGGACTGAGGAGCCCACAGGGTTTGACTTTA +
Preference number: 3 (lower is better)
Translates to: ICCPTFSGTRDW*EGLRSPQGLTL
Trigger: TAAAGTCAAACCCTGTGGGCTCCTCAGTCCTTCCCACCAGTCCCTGGTGCCTGAGAATGTGGGACAGCAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
3UTR TCA 72 bp CAGCCTGCTTGGTCAGACAAGCAGAGCGCTGCCCAGTaGCACCTAACAGGTAAGACTGAAGAGCTGAAGAAA +
Preference number: 3 (lower is better)
Translates to: QPAWSDKQSAAQ*HLTGKTEELKK
Trigger: TTTCTTCAGCTCTTCAGTCTTACCTGTTAGGTGTCACTGGGCAGCGCTCTGCTTGTCTGACCAAGCAGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
3UTR CCA 72 bp AACCCTCTTCCACATCCTATGTCCAACAGTAGCTGCTaGAGCTCCAGGCTGACAGTGGCACAACATGGCTTT +
Preference number: 3 (lower is better)
Translates to: NPLPHPMSNSSC*SSRLTVAQHGF
Trigger: AAAGCCATGTTGTGCCACTGTCAGCCTGGAGCTCCAGCAGCTACTGTTGGACATAGGATGTGGAAGAGGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
3UTR GCA 72 bp AGGCTAAAGATACTAAAGCCAGAGATGAGTTCCCAGTaGCAGACTACGTCCTCCAAAATACCCGGCAGGACA +
Preference number: 3 (lower is better)
Translates to: RLKILKPEMSSQ*QTTSSKIPGRT
Trigger: TGTCCTGCCGGGTATTTTGGAGGACGTAGTCTGGCACTGGGAACTCATCTCTGGCTTTAGTATCTTTAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
3UTR TCA 72 bp CACTACATCTGCACGAGGACCAAACTGATTCTGTACTaGGCTATTTTCTCCCAATCCTCAGGAGCTGGTGAG +
Preference number: 3 (lower is better)
Translates to: HYICTRTKLILY*AIFSQSSGAGE
Trigger: CTCACCAGCTCCTGAGGATTGGGAGAAAATAGCTCAGTACAGAATCAGTTTGGTCCTCGTGCAGATGTAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
3UTR CCA 72 bp ACTCAGAGTCAGCCCTCAGTATTCTACCCAACAGCATaGGCACGTCTGTCTAGTTTGACAGTGTTGCTTACA +
Preference number: 3 (lower is better)
Translates to: TQSQPSVFYPTA*ARLSSLTVLLT
Trigger: TGTAAGCAACACTGTCAAACTAGACAGACGTGCCCATGCTGTTGGGTAGAATACTGAGGGCTGACTCTGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
3UTR CCA 72 bp TCGACTGTTCCTGAACAATCACAAACTCCCACTGCATaGAGTAGACACAAGCTTCCCAATGTAAGAGCCACT +
Preference number: 3 (lower is better)
Translates to: STVPEQSQTPTA*SRHKLPNVRAT
Trigger: AGTGGCTCTTACATTGGGAAGCTTGTGTCTACTCCATGCAGTGGGAGTTTGTGATTGTTCAGGAACAGTCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
3UTR GCA 72 bp GAAGCGGTGGACCTTTTCAATTTAATGCTGAAAGTCTaGGTGAACATAATACCCGACCGAGTGTGCATCCAA +
Preference number: 3 (lower is better)
Translates to: EAVDLFNLMLKV*VNIIPDRVCIQ
Trigger: TTGGATGCACACTCGGTCGGGTATTATGTTCACGCAGACTTTCAGCATTAAATTGAAAAGGTCCACCGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
3UTR-3UTR CAA 90 bp GAAACACTTTCCTTCTGGAATGTTCTAGACATTGGTTACCCACTACTCAGAGTCTCTAGTTTGACAGTGTaGCTTACACTTCCCTCCTGC +
Preference number: 3 (lower is better)
Translates to: ETLSFWNVLDIGYPLLRVSSLTV*LTLPSC
Trigger: GCAGGAGGGAAGTGTAAGCAACACTGTCAAACTAGA...GACTCTGAGTAGTGGGTAACCAATGTCTAGAACATTCCAGAAGGAAAGTGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
3UTR TCA 72 bp CCGTTCTTAGAGCAACTCTTCATGCTCTCTCACGCTTaGACAGGAAACACTTTCCTTCTGGAATGTTCTAGA +
Preference number: 3 (lower is better)
Translates to: PFLEQLFMLSHA*TGNTFLLECSR
Trigger: TCTAGAACATTCCAGAAGGAAAGTGTTTCCTGTTCAAGCGTGAGAGAGCATGAAGAGTTGCTCTAAGAACGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
3UTR TCA 72 bp TGTCAACATGTCACTACATCTGCACGAGGACCAAACTaGTTCTGTACTGAGCTATTTTCTCCCAATCCTCAG +
Preference number: 3 (lower is better)
Translates to: CQHVTTSARGPN*FCTELFSPNPQ
Trigger: CTGAGGATTGGGAGAAAATAGCTCAGTACAGAATCAGTTTGGTCCTCGTGCAGATGTAGTGACATGTTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
3UTR CCA 72 bp TCCCTCCTGCCAGAAAGGTTACTTTCTTTTGATTCCTaGGAGACAATGTCGACTGTTCCTGAACAATCACAA +
Preference number: 3 (lower is better)
Translates to: SLLPERLLSFDS*ETMSTVPEQSQ
Trigger: TTGTGATTGTTCAGGAACAGTCGACATTGTCTCCCAGGAATCAAAAGAAAGTAACCTTTCTGGCAGGAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
3UTR CCA 72 bp ACAGGAAACACTTTCCTTCTGGAATGTTCTAGACATTaGTTACCCACTACTCAGAGTCAGCCCTCAGTATTC +
Preference number: 3 (lower is better)
Translates to: TGNTFLLECSRH*LPTTQSQPSVF
Trigger: GAATACTGAGGGCTGACTCTGAGTAGTGGGTAACCAATGTCTAGAACATTCCAGAAGGAAAGTGTTTCCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
3UTR CCA 72 bp GGACTGAGGAGCCCACAGGGTTTGACTTTACTTGACTaGCTCCTGTCTTTTAAACAGCAGAAGTTTTGTTTT +
Preference number: 3 (lower is better)
Translates to: GLRSPQGLTLLD*LLSFKQQKFCF
Trigger: AAAACAAAACTTCTGCTGTTTAAAAGACAGGAGCCAGTCAAGTAAAGTCAAACCCTGTGGGCTCCTCAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
CDS-3UTR GCA 90 bp TGCCTGCTCCGTGTTCTCACGCCTCTGCCGTCACTGAGAGCACCCTCCATCCTGGGATCCTCCTGGGAATaGCTGTCTGGGCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: CLLRVLTPLPSLRAPSILGSSWE*LSGQGQ
Trigger: CTGGCCCTGCCCAGACAGGCATTCCCAGGAGGATCC...CAGGATGGAGGGTGCTCTCAGTGACGGCAGAGGCGTGAGAACACGGAGCAGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR GCA 90 bp GAGGGGTGCCTGCTCCGTGTTCTCACGCCTCTGCCGTCACTGAGAGCACCCTCCTCGCTGCTGGTTCCATaGAGCACCAGATCAGGCATG +
Preference number: 4 (lower is better)
Translates to: EGCLLRVLTPLPSLRAPSSLLVP*STRSGM
Trigger: CATGCCTGATCTGGTGCTGCATGGAACCAGCAGCGA...GGAGGGTGCTCTCAGTGACGGCAGAGGCGTGAGAACACGGAGCAGGCACCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
3UTR CAA 72 bp GAGACACTTCTGCTCGGCTGTGCCTCGCCAGCCTGCTaGGTCAGACAAGCAGAGCGCTGCCCAGTGACACCT +
Preference number: 4 (lower is better)
Translates to: ETLLLGCASPAC*VRQAERCPVTP
Trigger: AGGTGTCACTGGGCAGCGCTCTGCTTGTCTGACCAAGCAGGCTGGCGAGGCACAGCCGAGCAGAAGTGTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
CDS-3UTR TCA 90 bp TGCAATGGGCTCGGGGACGTGTCTCCTGACATCTCCGGTCCCAAAGCTCACCAGTCCAAACTCGTTGTCTaGCTTCGGAGCCAGCGGCGC +
Preference number: 4 (lower is better)
Translates to: CNGLGDVSPDISGPKAHQSKLVV*LRSQRR
Trigger: GCGCCGCTGGCTCCGAAGTCAGACAACGAGTTTGGA...CTGGTGAGCTTTGGGACCGGAGATGTCAGGAGACACGTCCCCGAGCCCATTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
CDS-3UTR GCA 90 bp TGCCTGCTCCGTGTTCTCACGCCTCTGCCGTCACTGAGAGCACCCTCCATCCTGTGCCGCTGCTGCTGCTaGTTTCCTGACAGCATCTGG +
Preference number: 4 (lower is better)
Translates to: CLLRVLTPLPSLRAPSILCRCCC*FPDSIW
Trigger: CCAGATGCTGTCAGGAAAGCAGCAGCAGCAGCGGCA...CAGGATGGAGGGTGCTCTCAGTGACGGCAGAGGCGTGAGAACACGGAGCAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR GCA 90 bp GAGGGGTGCCTGCTCCGTGTTCTCACGCCTCTGCCGTCACTGAGAGCACCCTCCCGAACTGTCAGGTTCTaGCTCTTGGAAGCCCATACT +
Preference number: 4 (lower is better)
Translates to: EGCLLRVLTPLPSLRAPSRTVRF*LLEAHT
Trigger: AGTATGGGCTTCCAAGAGGCAGAACCTGACAGTTCG...GGAGGGTGCTCTCAGTGACGGCAGAGGCGTGAGAACACGGAGCAGGCACCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp GAGGGGTGCCTGCTCCGTGTTCTCACGCCTCTGCCGTCACTGAGAGCACCCTCCGAGTGGAGGGTTTGTTaGTCCATCCTCCTTCTTACC +
Preference number: 4 (lower is better)
Translates to: EGCLLRVLTPLPSLRAPSEWRVC*SILLLT
Trigger: GGTAAGAAGGAGGATGGACCAACAAACCCTCCACTC...GGAGGGTGCTCTCAGTGACGGCAGAGGCGTGAGAACACGGAGCAGGCACCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp TGCCTGCTCCGTGTTCTCACGCCTCTGCCGTCACTGAGAGCACCCTCCATCCTGGAGACCAAGACATCCTaGCCCAGCTTCATGGTGTCC +
Preference number: 4 (lower is better)
Translates to: CLLRVLTPLPSLRAPSILETKTS*PSFMVS
Trigger: GGACACCATGAAGCTGGGCCAGGATGTCTTGGTCTC...CAGGATGGAGGGTGCTCTCAGTGACGGCAGAGGCGTGAGAACACGGAGCAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR GCA 90 bp GCCTCTGCCGTCACTGAGAGCACCCTCCATCCTGTCTCATTTTCCAATGAGAGCCATGAGAAGAGCTGCTaGCGCTGCTGCTGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: ASAVTESTLHPVSFSNESHEKSC*RCCCCR
Trigger: GCGGCAGCAGCAGCAGCGGCAGCAGCTCTTCTCATG...GCTCTCATTGGAAAATGAGACAGGATGGAGGGTGCTCTCAGTGACGGCAGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp GAGGGGTGCCTGCTCCGTGTTCTCACGCCTCTGCCGTCACTGAGAGCACCCTCCTGGACTGAAGTAAACTaGACACCTGACTGGAGACCA +
Preference number: 4 (lower is better)
Translates to: EGCLLRVLTPLPSLRAPSWTEVN*TPDWRP
Trigger: TGGTCTCCAGTCAGGTGTCCAGTTTACTTCAGTCCA...GGAGGGTGCTCTCAGTGACGGCAGAGGCGTGAGAACACGGAGCAGGCACCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR TCA 90 bp GCCTCTGCCGTCACTGAGAGCACCCTCCATCCTGTCTCATTTTCCAATGAGAGCCGCCGCCCCTTTTGTTaGAGAGCTTCTGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: ASAVTESTLHPVSFSNESRRPFC*RASGAG
Trigger: CCCTGCTCCAGAAGCTCTTCAACAAAAGGGGCGGCG...GCTCTCATTGGAAAATGAGACAGGATGGAGGGTGCTCTCAGTGACGGCAGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp TGCCTGCTCCGTGTTCTCACGCCTCTGCCGTCACTGAGAGCACCCTCCATCCTGTGGGCACCTCACAGCTaGGAGGACTTGAAGAACAAT +
Preference number: 4 (lower is better)
Translates to: CLLRVLTPLPSLRAPSILWAPHS*EDLKNN
Trigger: ATTGTTCTTCAAGTCCTCCCAGCTGTGAGGTGCCCA...CAGGATGGAGGGTGCTCTCAGTGACGGCAGAGGCGTGAGAACACGGAGCAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR GCA 90 bp TTGGTTACCCACTACTCAGAGTCAGCCCTCAGTATTCTACCCAACAGCATGGGCCATGAGAAGAGCTGCTaGCGCTGCTGCTGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: LVTHYSESALSILPNSMGHEKSC*RCCCCR
Trigger: GCGGCAGCAGCAGCAGCGGCAGCAGCTCTTCTCATG...GCCCATGCTGTTGGGTAGAATACTGAGGGCTGACTCTGAGTAGTGGGTAACCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR GCA 90 bp CTCGGGGACGTGTCTCCTGACATCTCCGGTCCCAAAGCTCACCAGTGTGCTGGGCTTCATTCTGCCCTCTaGTTGGCATATCAACAGGTG +
Preference number: 4 (lower is better)
Translates to: LGDVSPDISGPKAHQCAGLHSAL*LAYQQV
Trigger: CACCTGTTGATATGCCAAGCAGAGGGCAGAATGAAG...CCCAGCACACTGGTGAGCTTTGGGACCGGAGATGTCAGGAGACACGTCCCCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
CDS-3UTR GCA 90 bp CTCGGGGACGTGTCTCCTGACATCTCCGGTCCCAAAGCTCACCAGTGTGCTGGGCATGGCCTTTTCGATTaGACCCTTCAGCCTGTTCAT +
Preference number: 4 (lower is better)
Translates to: LGDVSPDISGPKAHQCAGHGLFD*TLQPVH
Trigger: ATGAACAGGCTGAAGGGTGCAATCGAAAAGGCCATG...CCCAGCACACTGGTGAGCTTTGGGACCGGAGATGTCAGGAGACACGTCCCCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
CDS-3UTR GCA 90 bp CCTCTGCCGTCACTGAGAGCACCCTCCATCCTGTCTCATTTTCCAATGAGAGCTCTCAGCTCTTTCACGTaGACACGCGTGTGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: PLPSLRAPSILSHFPMRALSSFT*TRVCPR
Trigger: CCGGGGACACACGCGTGTGCACGTGAAAGAGCTGAG...AGCTCTCATTGGAAAATGAGACAGGATGGAGGGTGCTCTCAGTGACGGCAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR GCA 90 bp GCTGGGGCCAGTGGTCTCACTCAGCAGGGTGCTAATCAAAATCTCCCTGCACTTGCAGCAGTTTGCCGCTaGACACCTGCAGCAGACCTA +
Preference number: 4 (lower is better)
Translates to: AGASGLTQQGANQNLPALAAVCR*TPAADL
Trigger: TAGGTCTGCTGCAGGTGTGCAGCGGCAAACTGCTGC...AAGTGCAGGGAGATTTTGATTAGCACCCTGCTGAGTGAGACCACTGGCCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp TGCCTGCTCCGTGTTCTCACGCCTCTGCCGTCACTGAGAGCACCCTCCATCCTGTCCTGGGTTGCCTCTTaGTCATTCTGTTTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: CLLRVLTPLPSLRAPSILSWVAS*SFCLSS
Trigger: TGAGGACAAACAGAATGACCAAGAGGCAACCCAGGA...CAGGATGGAGGGTGCTCTCAGTGACGGCAGAGGCGTGAGAACACGGAGCAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp ATTGGTTACCCACTACTCAGAGTCAGCCCTCAGTATTCTACCCAACAGCATGGGCTGGGAATGCCTGTCTaGGCAGGGCCAGGCTGCGGA +
Preference number: 4 (lower is better)
Translates to: IGYPLLRVSPQYSTQQHGLGMPV*AGPGCG
Trigger: TCCGCAGCCTGGCCCTGCCCAGACAGGCATTCCCAG...CCCATGCTGTTGGGTAGAATACTGAGGGCTGACTCTGAGTAGTGGGTAACCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR TCA 90 bp CAAAGGACACGTCATCGTCATCGCCCGCACCGGGGGAGCCAGGAGAAGAGCAGCCTGACAGCATCTGGCTaGCATTTTAATAGGAACATC +
Preference number: 4 (lower is better)
Translates to: QRTRHRHRPHRGSQEKSSLTASG*HFNRNI
Trigger: GATGTTCCTATTAAAATGTCAGCCAGATGCTGTCAG...GCTGCTCTTCTCCTGGCTCCCCCGGTGCGGGCGATGACGATGACGTGTCCTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
CDS-3UTR GCA 90 bp ATTGGTTACCCACTACTCAGAGTCAGCCCTCAGTATTCTACCCAACAGCATGGGGGATCCTCCTGGGAATaGCTGTCTGGGCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: IGYPLLRVSPQYSTQQHGGSSWE*LSGQGQ
Trigger: CTGGCCCTGCCCAGACAGGCATTCCCAGGAGGATCC...CCCATGCTGTTGGGTAGAATACTGAGGGCTGACTCTGAGTAGTGGGTAACCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp TGCAATGGGCTCGGGGACGTGTCTCCTGACATCTCCGGTCCCAAAGCTCACCAGATTCTGCCCTCTGCTTaGCATATCAACAGGTGTGCT +
Preference number: 4 (lower is better)
Translates to: CNGLGDVSPDISGPKAHQILPSA*HINRCA
Trigger: AGCACACCTGTTGATATGCCAAGCAGAGGGCAGAAT...CTGGTGAGCTTTGGGACCGGAGATGTCAGGAGACACGTCCCCGAGCCCATTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp CCTCTGCCGTCACTGAGAGCACCCTCCATCCTGTCTCATTTTCCAATGAGAGCTGGTGCTCTGAGACCTTaGCAGAGGCAGCTCCACTTC +
Preference number: 4 (lower is better)
Translates to: PLPSLRAPSILSHFPMRAGALRP*QRQLHF
Trigger: GAAGTGGAGCTGCCTCTGCCAAGGTCTCAGAGCACC...AGCTCTCATTGGAAAATGAGACAGGATGGAGGGTGCTCTCAGTGACGGCAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR TCA 90 bp TCTCACGCCTCTGCCGTCACTGAGAGCACCCTCCATCCTGTCTCATTTTCCAATTCTCCCCAAGCATGCTaGCATCAGATGCTGGTCTCG +
Preference number: 4 (lower is better)
Translates to: SHASAVTESTLHPVSFSNSPQAC*HQMLVS
Trigger: CGAGACCAGCATCTGATGTCAGCATGCTTGGGGAGA...ATTGGAAAATGAGACAGGATGGAGGGTGCTCTCAGTGACGGCAGAGGCGTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR TCA 90 bp ATTGGTTACCCACTACTCAGAGTCAGCCCTCAGTATTCTACCCAACAGCATGGGTCCAAACTCGTTGTCTaGCTTCGGAGCCAGCGGCGC +
Preference number: 4 (lower is better)
Translates to: IGYPLLRVSPQYSTQQHGSKLVV*LRSQRR
Trigger: GCGCCGCTGGCTCCGAAGTCAGACAACGAGTTTGGA...CCCATGCTGTTGGGTAGAATACTGAGGGCTGACTCTGAGTAGTGGGTAACCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR TCA 90 bp GACATTGGTTACCCACTACTCAGAGTCAGCCCTCAGTATTCTACCCAACAGCATAAGAAGCGCTCCGGGTaGGCCGGAGAGGTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: DIGYPLLRVSPQYSTQQHKKRSG*AGEVLL
Trigger: AAGGAGGACCTCTCCGGCTCACCCGGAGCGCTTCTT...ATGCTGTTGGGTAGAATACTGAGGGCTGACTCTGAGTAGTGGGTAACCAATGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
CDS-3UTR GCA 90 bp ACTACTCAGAGTCAGCCCTCAGTATTCTACCCAACAGCATGGGCACGTCTGTCTTGCTGCCGCTGCTGCTaGTGCTTTCCTGACAGCATC +
Preference number: 4 (lower is better)
Translates to: TTQSQPSVFYPTAWARLSCCRCC*CFPDSI
Trigger: GATGCTGTCAGGAAAGCAGCAGCAGCAGCGGCAGCA...AGACAGACGTGCCCATGCTGTTGGGTAGAATACTGAGGGCTGACTCTGAGTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR GCA 90 bp GAGGGGTGCCTGCTCCGTGTTCTCACGCCTCTGCCGTCACTGAGAGCACCCTCCTATTCGAAGCTGTCCTaGAGATTATTTGTACTTCCA +
Preference number: 4 (lower is better)
Translates to: EGCLLRVLTPLPSLRAPSYSKLS*RLFVLP
Trigger: TGGAAGTACAAATAATCTGCAGGACAGCTTCGAATA...GGAGGGTGCTCTCAGTGACGGCAGAGGCGTGAGAACACGGAGCAGGCACCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR GCA 90 bp TTGGTTACCCACTACTCAGAGTCAGCCCTCAGTATTCTACCCAACAGCATGGGCCCCATAGGGGACATCTaGAGCAATCAGCAGGCCACC +
Preference number: 4 (lower is better)
Translates to: LVTHYSESALSILPNSMGPIGDI*SNQQAT
Trigger: GGTGGCCTGCTGATTGCTGCAGATGTCCCCTATGGG...GCCCATGCTGTTGGGTAGAATACTGAGGGCTGACTCTGAGTAGTGGGTAACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp CCTCTGCCGTCACTGAGAGCACCCTCCATCCTGTCTCATTTTCCAATGAGAGCTGAGAAAAAGAAGTCCTaGAAATCCCGCTGGGCGGCC +
Preference number: 4 (lower is better)
Translates to: PLPSLRAPSILSHFPMRAEKKKS*KSRWAA
Trigger: GGCCGCCCAGCGGGATTTCCAGGACTTCTTTTTCTC...AGCTCTCATTGGAAAATGAGACAGGATGGAGGGTGCTCTCAGTGACGGCAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp ACTACTCAGAGTCAGCCCTCAGTATTCTACCCAACAGCATGGGCACGTCTGTCTTCCTCCTTCTTACCCTaGGCACCTCACAGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: TTQSQPSVFYPTAWARLSSSFLP*APHSWE
Trigger: CTCCCAGCTGTGAGGTGCCCAGGGTAAGAAGGAGGA...AGACAGACGTGCCCATGCTGTTGGGTAGAATACTGAGGGCTGACTCTGAGTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp TATGACAGAATGACAGCATCCGCGTCAGCACAGGTCCATGAGATGCTTTGTTTACTGGGAATGCCTGTCTaGGCAGGGCCAGGCTGCGGA +
Preference number: 4 (lower is better)
Translates to: YDRMTASASAQVHEMLCLLGMPV*AGPGCG
Trigger: TCCGCAGCCTGGCCCTGCCCAGACAGGCATTCCCAG...TAAACAAAGCATCTCATGGACCTGTGCTGACGCGGATGCTGTCATTCTGTCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
CDS-3UTR TCA 90 bp GCCGTCACTGAGAGCACCCTCCATCCTGTCTCATTTTCCAATGAGAGCTGTCCTGTCCTGTCACAACTGTaGCCTAGTTCTAGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: AVTESTLHPVSFSNESCPVLSQL*PSSSRA
Trigger: AGCCCTGCTAGAACTAGGTCACAGTTGTGACAGGAC...AGGACAGCTCTCATTGGAAAATGAGACAGGATGGAGGGTGCTCTCAGTGACGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR TCA 90 bp TCAGGAGCTGGTGAGGCCGAGTCCATGTGTAAACGAGAGAAGCCAGGAGAAAGAGTCCTGTCACAACTGTaGCCTAGTTCTAGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: SGAGEAESMCKREKPGERVLSQL*PSSSRA
Trigger: AGCCCTGCTAGAACTAGGTCACAGTTGTGACAGGAC...TCTTTCTCCTGGCTTCTCTCGTTTACACATGGACTCGGCCTCACCAGCTCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
CDS-3UTR GCA 90 bp CTAGACATTGGTTACCCACTACTCAGAGTCAGCCCTCAGTATTCTACCCAACAGTGCTGCTGCCGCTGCTaGTGCTGCTTTCCTGACAGC +
Preference number: 4 (lower is better)
Translates to: LDIGYPLLRVSPQYSTQQCCCRC*CCFPDS
Trigger: GCTGTCAGGAAAGCAGCAGCAGCAGCGGCAGCAGCA...CTGTTGGGTAGAATACTGAGGGCTGACTCTGAGTAGTGGGTAACCAATGTCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR GCA 90 bp CGTCTGTCTAGTTTGACAGTGTTGCTTACACTTCCCTCCTGCCAGAAAGGTTACAGCCATGAGAAGAGCTaGTGCCGCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RLSSLTVLLTLPSCQKGYSHEKS*CRCCCC
Trigger: GCAGCAGCAGCAGCGGCAGCAGCTCTTCTCATGGCT...GTAACCTTTCTGGCAGGAGGGAAGTGTAAGCAACACTGTCAAACTAGACAGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR GCA 90 bp GCCTCTGCCGTCACTGAGAGCACCCTCCATCCTGTCTCATTTTCCAATGAGAGCAAGCTGATCGAGCAATaGCGCTGTCCCTGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: ASAVTESTLHPVSFSNESKLIEQ*RCPCLH
Trigger: ATGAAGACAGGGACAGCGGCATTGCTCGATCAGCTT...GCTCTCATTGGAAAATGAGACAGGATGGAGGGTGCTCTCAGTGACGGCAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR GCA 90 bp GCACGTCTGTCTAGTTTGACAGTGTTGCTTACACTTCCCTCCTGCCAGAAAGGTCCCATAGGGGACATCTaGAGCAATCAGCAGGCCACC +
Preference number: 4 (lower is better)
Translates to: ARLSSLTVLLTLPSCQKGPIGDI*SNQQAT
Trigger: GGTGGCCTGCTGATTGCTGCAGATGTCCCCTATGGG...ACCTTTCTGGCAGGAGGGAAGTGTAAGCAACACTGTCAAACTAGACAGACGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR GCA 90 bp TTGGTTACCCACTACTCAGAGTCAGCCCTCAGTATTCTACCCAACAGCATGGGCGTGGACCAGATCAGCTaGCAGGCACTGCTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: LVTHYSESALSILPNSMGVDQIS*QALLQL
Trigger: AAGCTGAAGCAGTGCCTGGCAGCTGATCTGGTCCAC...GCCCATGCTGTTGGGTAGAATACTGAGGGCTGACTCTGAGTAGTGGGTAACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR GCA 90 bp CTAGACATTGGTTACCCACTACTCAGAGTCAGCCCTCAGTATTCTACCCAACAGCTCAGCTCTTTCACGTaGACACGCGTGTGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: LDIGYPLLRVSPQYSTQQLSSFT*TRVCPR
Trigger: CCGGGGACACACGCGTGTGCACGTGAAAGAGCTGAG...CTGTTGGGTAGAATACTGAGGGCTGACTCTGAGTAGTGGGTAACCAATGTCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp TCTCACGCCTCTGCCGTCACTGAGAGCACCCTCCATCCTGTCTCATTTTCCAATGAGGCACTAGCCCCATaGAAATGTCCACAGGCCTTT +
Preference number: 4 (lower is better)
Translates to: SHASAVTESTLHPVSFSNEALAP*KCPQAF
Trigger: AAAGGCCTGTGGACATTTCCATGGGGCTAGTGCCTC...ATTGGAAAATGAGACAGGATGGAGGGTGCTCTCAGTGACGGCAGAGGCGTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp ACCCACTACTCAGAGTCAGCCCTCAGTATTCTACCCAACAGCATGGGCACGTCTAACTGGACACCTGACTaGAGACCAAGACATCCTGGC +
Preference number: 4 (lower is better)
Translates to: THYSESALSILPNSMGTSNWTPD*RPRHPG
Trigger: GCCAGGATGTCTTGGTCTCCAGTCAGGTGTCCAGTT...AGACGTGCCCATGCTGTTGGGTAGAATACTGAGGGCTGACTCTGAGTAGTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp TCTCACGCCTCTGCCGTCACTGAGAGCACCCTCCATCCTGTCTCATTTTCCAATAACTGGACACCTGACTaGAGACCAAGACATCCTGGC +
Preference number: 4 (lower is better)
Translates to: SHASAVTESTLHPVSFSNNWTPD*RPRHPG
Trigger: GCCAGGATGTCTTGGTCTCCAGTCAGGTGTCCAGTT...ATTGGAAAATGAGACAGGATGGAGGGTGCTCTCAGTGACGGCAGAGGCGTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp GACATTGGTTACCCACTACTCAGAGTCAGCCCTCAGTATTCTACCCAACAGCATAGTGAGTGCTGGCGATaGCCGTCAGCAGAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: DIGYPLLRVSPQYSTQQHSECWR*PSAEAG
Trigger: ACCTGCCTCTGCTGACGGCCATCGCCAGCACTCACT...ATGCTGTTGGGTAGAATACTGAGGGCTGACTCTGAGTAGTGGGTAACCAATGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp GCTCCCTGGCAAACAATGGTACCATGGAGCCAGGAAATGGAAAACAGCAAACAAAGTGAGTGCTGGCGATaGCCGTCAGCAGAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: APWQTMVPWSQEMENSKQSECWR*PSAEAG
Trigger: ACCTGCCTCTGCTGACGGCCATCGCCAGCACTCACT...TTGTTTGCTGTTTTCCATTTCCTGGCTCCATGGTACCATTGTTTGCCAGGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
CDS-3UTR TCA 90 bp GTTCTAGACATTGGTTACCCACTACTCAGAGTCAGCCCTCAGTATTCTACCCAACGCCGCCCCTTTTGTTaGAGAGCTTCTGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: VLDIGYPLLRVSPQYSTQRRPFC*RASGAG
Trigger: CCCTGCTCCAGAAGCTCTTCAACAAAAGGGGCGGCG...TTGGGTAGAATACTGAGGGCTGACTCTGAGTAGTGGGTAACCAATGTCTAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR TCA 90 bp GCCGTCACTGAGAGCACCCTCCATCCTGTCTCATTTTCCAATGAGAGCTGTCCTCTCTGGAGTCAAACATaGCTTGTCTGCCTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: AVTESTLHPVSFSNESCPLWSQT*LVCLSS
Trigger: AGAGGAGAGGCAGACAAGTCATGTTTGACTCCAGAG...AGGACAGCTCTCATTGGAAAATGAGACAGGATGGAGGGTGCTCTCAGTGACGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR TCA 90 bp GCCTCTGCCGTCACTGAGAGCACCCTCCATCCTGTCTCATTTTCCAATGAGAGCCTGGACTCGGAGACTTaGTTCAGAGATCTTCCTACA +
Preference number: 4 (lower is better)
Translates to: ASAVTESTLHPVSFSNESLDSET*FRDLPT
Trigger: TGTAGGAAGATCTCTGAATCAAGTCTCCGAGTCCAG...GCTCTCATTGGAAAATGAGACAGGATGGAGGGTGCTCTCAGTGACGGCAGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR TCA 90 bp CCTCTGCCGTCACTGAGAGCACCCTCCATCCTGTCTCATTTTCCAATGAGAGCTAGTAAACTGGACACCTaGCTGGAGACCAAGACATCC +
Preference number: 4 (lower is better)
Translates to: PLPSLRAPSILSHFPMRASKLDT*LETKTS
Trigger: GGATGTCTTGGTCTCCAGTCAGGTGTCCAGTTTACT...AGCTCTCATTGGAAAATGAGACAGGATGGAGGGTGCTCTCAGTGACGGCAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR GCA 90 bp GTTCTAGACATTGGTTACCCACTACTCAGAGTCAGCCCTCAGTATTCTACCCAAAGCCATGAGAAGAGCTaGTGCCGCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: VLDIGYPLLRVSPQYSTQSHEKS*CRCCCC
Trigger: GCAGCAGCAGCAGCGGCAGCAGCTCTTCTCATGGCT...TTGGGTAGAATACTGAGGGCTGACTCTGAGTAGTGGGTAACCAATGTCTAGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR GCA 90 bp TACCCACTACTCAGAGTCAGCCCTCAGTATTCTACCCAACAGCATGGGCACGTCTCTGAATTCTCCCAGTaGTTCCATCAGACGGCTCAC +
Preference number: 4 (lower is better)
Translates to: YPLLRVSPQYSTQQHGHVSEFSQ*FHQTAH
Trigger: GTGAGCCGTCTGATGGAAGCACTGGGAGAATTCAGA...GACGTGCCCATGCTGTTGGGTAGAATACTGAGGGCTGACTCTGAGTAGTGGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR GCA 90 bp ATTGGTTACCCACTACTCAGAGTCAGCCCTCAGTATTCTACCCAACAGCATGGGTCTCCGCCCACTTTCTaGGGCACAAAGGGAATGTGC +
Preference number: 4 (lower is better)
Translates to: IGYPLLRVSPQYSTQQHGSPPTF*GTKGMC
Trigger: GCACATTCCCTTTGTGCCGCAGAAAGTGGGCGGAGA...CCCATGCTGTTGGGTAGAATACTGAGGGCTGACTCTGAGTAGTGGGTAACCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp GCCTCTGCCGTCACTGAGAGCACCCTCCATCCTGTCTCATTTTCCAATGAGAGCGCTCCTCCATTCTTTTaGTCCGGCTTTCAAAGTCAG +
Preference number: 4 (lower is better)
Translates to: ASAVTESTLHPVSFSNESAPPFF*SGFQSQ
Trigger: CTGACTTTGAAAGCCGGACCAAAAGAATGGAGGAGC...GCTCTCATTGGAAAATGAGACAGGATGGAGGGTGCTCTCAGTGACGGCAGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp ACCCACTACTCAGAGTCAGCCCTCAGTATTCTACCCAACAGCATGGGCACGTCTGATCAGGCATGTACGTaGCACAGTAACCTGCCAGAA +
Preference number: 4 (lower is better)
Translates to: THYSESALSILPNSMGTSDQACT*HSNLPE
Trigger: TTCTGGCAGGTTACTGTGCCACGTACATGCCTGATC...AGACGTGCCCATGCTGTTGGGTAGAATACTGAGGGCTGACTCTGAGTAGTGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp CCTCTGCCGTCACTGAGAGCACCCTCCATCCTGTCTCATTTTCCAATGAGAGCTGATCAGGCATGTACGTaGCACAGTAACCTGCCAGAA +
Preference number: 4 (lower is better)
Translates to: PLPSLRAPSILSHFPMRADQACT*HSNLPE
Trigger: TTCTGGCAGGTTACTGTGCCACGTACATGCCTGATC...AGCTCTCATTGGAAAATGAGACAGGATGGAGGGTGCTCTCAGTGACGGCAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR GCA 90 bp ACTACTCAGAGTCAGCCCTCAGTATTCTACCCAACAGCATGGGCACGTCTGTCTCTCTGCTTTCTGAGCTaGTGCCTCTTCCATCTTCTG +
Preference number: 4 (lower is better)
Translates to: TTQSQPSVFYPTAWARLSLCFLS*CLFHLL
Trigger: CAGAAGATGGAAGAGGCAGCAGCTCAGAAAGCAGAG...AGACAGACGTGCCCATGCTGTTGGGTAGAATACTGAGGGCTGACTCTGAGTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR GCA 90 bp ACTTTCCTTCTGGAATGTTCTAGACATTGGTTACCCACTACTCAGAGTCAGCCCTGCTGCCGCTGCTGCTaGTGCTTTCCTGACAGCATC +
Preference number: 4 (lower is better)
Translates to: TFLLECSRHWLPTTQSQPCCRCC*CFPDSI
Trigger: GATGCTGTCAGGAAAGCAGCAGCAGCAGCGGCAGCA...GGGCTGACTCTGAGTAGTGGGTAACCAATGTCTAGAACATTCCAGAAGGAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR GCA 90 bp TACACTTCCCTCCTGCCAGAAAGGTTACTTTCTTTTGATTCCTGGGAGACAATGTGCTGCTGCCGCTGCTaGTGCTGCTTTCCTGACAGC +
Preference number: 4 (lower is better)
Translates to: YTSLLPERLLSFDSWETMCCCRC*CCFPDS
Trigger: GCTGTCAGGAAAGCAGCAGCAGCAGCGGCAGCAGCA...CATTGTCTCCCAGGAATCAAAAGAAAGTAACCTTTCTGGCAGGAGGGAAGTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR GCA 90 bp GCCGTCACTGAGAGCACCCTCCATCCTGTCTCATTTTCCAATGAGAGCTGTCCTCATGGCCTTTTCGATTaGACCCTTCAGCCTGTTCAT +
Preference number: 4 (lower is better)
Translates to: AVTESTLHPVSFSNESCPHGLFD*TLQPVH
Trigger: ATGAACAGGCTGAAGGGTGCAATCGAAAAGGCCATG...AGGACAGCTCTCATTGGAAAATGAGACAGGATGGAGGGTGCTCTCAGTGACGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR GCA 90 bp CTTACACTTCCCTCCTGCCAGAAAGGTTACTTTCTTTTGATTCCTGGGAGACAAACCCCTGCAGCAGTTTaGCGCTGCACACCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: LTLPSCQKGYFLLIPGRQTPAAV*RCTPAA
Trigger: TGCTGCAGGTGTGCAGCGGCAAACTGCTGCAGGGGT...TTGTCTCCCAGGAATCAAAAGAAAGTAACCTTTCTGGCAGGAGGGAAGTGTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp ACCCACTACTCAGAGTCAGCCCTCAGTATTCTACCCAACAGCATGGGCACGTCTTCAAACAGGGGGAAGTaGGAGAAAAAGAAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: THYSESALSILPNSMGTSSNRGK*EKKKSW
Trigger: CCAGGACTTCTTTTTCTCCCACTTCCCCCTGTTTGA...AGACGTGCCCATGCTGTTGGGTAGAATACTGAGGGCTGACTCTGAGTAGTGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp CCTCTGCCGTCACTGAGAGCACCCTCCATCCTGTCTCATTTTCCAATGAGAGCTGCTTTAATGGGAGGGTaGTCAACAGGCATGACAGTT +
Preference number: 4 (lower is better)
Translates to: PLPSLRAPSILSHFPMRAALMGG*STGMTV
Trigger: AACTGTCATGCCTGTTGACCACCCTCCCATTAAAGC...AGCTCTCATTGGAAAATGAGACAGGATGGAGGGTGCTCTCAGTGACGGCAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp TACCCACTACTCAGAGTCAGCCCTCAGTATTCTACCCAACAGCATGGGCACGTCCTCGGAATTCTGCTCTaGCCTCTTGCATCTGTTCTT +
Preference number: 4 (lower is better)
Translates to: YPLLRVSPQYSTQQHGHVLGILL*PLASVL
Trigger: AAGAACAGATGCAAGAGGCCAGAGCAGAATTCCGAG...GACGTGCCCATGCTGTTGGGTAGAATACTGAGGGCTGACTCTGAGTAGTGGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp AGAATGACAGCATCCGCGTCAGCACAGGTCCATGAGATGCTTTGTTTACTGTTTTCCTCCTTCTTACCCTaGGCACCTCACAGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: RMTASASAQVHEMLCLLFSSFLP*APHSWE
Trigger: CTCCCAGCTGTGAGGTGCCCAGGGTAAGAAGGAGGA...AAACAGTAAACAAAGCATCTCATGGACCTGTGCTGACGCGGATGCTGTCATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp GTTCTAGACATTGGTTACCCACTACTCAGAGTCAGCCCTCAGTATTCTACCCAAGGTGCTCTGAGACCTTaGCAGAGGCAGCTCCACTTC +
Preference number: 4 (lower is better)
Translates to: VLDIGYPLLRVSPQYSTQGALRP*QRQLHF
Trigger: GAAGTGGAGCTGCCTCTGCCAAGGTCTCAGAGCACC...TTGGGTAGAATACTGAGGGCTGACTCTGAGTAGTGGGTAACCAATGTCTAGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp CGTCTGTCTAGTTTGACAGTGTTGCTTACACTTCCCTCCTGCCAGAAAGGTTACGAGACCAAGACATCCTaGCCCAGCTTCATGGTGTCC +
Preference number: 4 (lower is better)
Translates to: RLSSLTVLLTLPSCQKGYETKTS*PSFMVS
Trigger: GGACACCATGAAGCTGGGCCAGGATGTCTTGGTCTC...GTAACCTTTCTGGCAGGAGGGAAGTGTAAGCAACACTGTCAAACTAGACAGACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
3UTR CAA 72 bp AGGGACTGGTGGGAAGGACTGAGGAGCCCACAGGGTTaGACTTTACTTGACTGGCTCCTGTCTTTTAAACAG +
Preference number: 4 (lower is better)
Translates to: RDWWEGLRSPQG*TLLDWLLSFKQ
Trigger: CTGTTTAAAAGACAGGAGCCAGTCAAGTAAAGTCAAACCCTGTGGGCTCCTCAGTCCTTCCCACCAGTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
CDS-3UTR TCA 90 bp GCACGTCTGTCTAGTTTGACAGTGTTGCTTACACTTCCCTCCTGCCAGAAAGGTCTCTGGAGTCAAACATaGCTTGTCTGCCTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: ARLSSLTVLLTLPSCQKGLWSQT*LVCLSS
Trigger: AGAGGAGAGGCAGACAAGTCATGTTTGACTCCAGAG...ACCTTTCTGGCAGGAGGGAAGTGTAAGCAACACTGTCAAACTAGACAGACGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR TCA 90 bp GTTCTAGACATTGGTTACCCACTACTCAGAGTCAGCCCTCAGTATTCTACCCAATCTCCCCAAGCATGCTaGCATCAGATGCTGGTCTCG +
Preference number: 4 (lower is better)
Translates to: VLDIGYPLLRVSPQYSTQSPQAC*HQMLVS
Trigger: CGAGACCAGCATCTGATGTCAGCATGCTTGGGGAGA...TTGGGTAGAATACTGAGGGCTGACTCTGAGTAGTGGGTAACCAATGTCTAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR TCA 90 bp ATTGGTTACCCACTACTCAGAGTCAGCCCTCAGTATTCTACCCAACAGCATGGGTTTCAAAGTCAGCTTTaGAGGAGCACCCAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: IGYPLLRVSPQYSTQQHGFQSQL*RSTQSP
Trigger: AGGGCTCTGGGTGCTCCTTCAAAGCTGACTTTGAAA...CCCATGCTGTTGGGTAGAATACTGAGGGCTGACTCTGAGTAGTGGGTAACCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR GCA 90 bp TCTCACGCCTCTGCCGTCACTGAGAGCACCCTCCATCCTGTCTCATTTTCCAATTCTGCTCTGGCCTCTTaGATCTGTTCTTTTCAGGTT +
Preference number: 4 (lower is better)
Translates to: SHASAVTESTLHPVSFSNSALAS*ICSFQV
Trigger: AACCTGAAAAGAACAGATGCAAGAGGCCAGAGCAGA...ATTGGAAAATGAGACAGGATGGAGGGTGCTCTCAGTGACGGCAGAGGCGTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR GCA 90 bp GCTTACACTTCCCTCCTGCCAGAAAGGTTACTTTCTTTTGATTCCTGGGAGACATCTCCGCCCACTTTCTaGGGCACAAAGGGAATGTGC +
Preference number: 4 (lower is better)
Translates to: AYTSLLPERLLSFDSWETSPPTF*GTKGMC
Trigger: GCACATTCCCTTTGTGCCGCAGAAAGTGGGCGGAGA...TGTCTCCCAGGAATCAAAAGAAAGTAACCTTTCTGGCAGGAGGGAAGTGTAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp GCCTCTGCCGTCACTGAGAGCACCCTCCATCCTGTCTCATTTTCCAATGAGAGCAGTGTATCTTCAGGGTaGAGCCTTTGTAACTCATTG +
Preference number: 4 (lower is better)
Translates to: ASAVTESTLHPVSFSNESSVSSG*SLCNSL
Trigger: CAATGAGTTACAAAGGCTCCACCCTGAAGATACACT...GCTCTCATTGGAAAATGAGACAGGATGGAGGGTGCTCTCAGTGACGGCAGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp ACTACTCAGAGTCAGCCCTCAGTATTCTACCCAACAGCATGGGCACGTCTGTCTTCCTACAGGAGATCATaGCCTTTTCGATTGCACCCT +
Preference number: 4 (lower is better)
Translates to: TTQSQPSVFYPTAWARLSSYRRS*PFRLHP
Trigger: AGGGTGCAATCGAAAAGGCCATGATCTCCTGTAGGA...AGACAGACGTGCCCATGCTGTTGGGTAGAATACTGAGGGCTGACTCTGAGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp GCCGTCACTGAGAGCACCCTCCATCCTGTCTCATTTTCCAATGAGAGCTGTCCTCATGGTAAGCCAAACTaGTTCAGCTATCCTTGGAAC +
Preference number: 4 (lower is better)
Translates to: AVTESTLHPVSFSNESCPHGKPN*FSYPWN
Trigger: GTTCCAAGGATAGCTGAACCAGTTTGGCTTACCATG...AGGACAGCTCTCATTGGAAAATGAGACAGGATGGAGGGTGCTCTCAGTGACGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp ACTACTCAGAGTCAGCCCTCAGTATTCTACCCAACAGCATGGGCACGTCTGTCTTCCTGGGTTGCCTCTTaGTCATTCTGTTTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: TTQSQPSVFYPTAWARLSSWVAS*SFCLSS
Trigger: TGAGGACAAACAGAATGACCAAGAGGCAACCCAGGA...AGACAGACGTGCCCATGCTGTTGGGTAGAATACTGAGGGCTGACTCTGAGTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp CTAGACATTGGTTACCCACTACTCAGAGTCAGCCCTCAGTATTCTACCCAACAGGAGGCACTAGCCCCATaGAAATGTCCACAGGCCTTT +
Preference number: 4 (lower is better)
Translates to: LDIGYPLLRVSPQYSTQQEALAP*KCPQAF
Trigger: AAAGGCCTGTGGACATTTCCATGGGGCTAGTGCCTC...CTGTTGGGTAGAATACTGAGGGCTGACTCTGAGTAGTGGGTAACCAATGTCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp GTTCTAGACATTGGTTACCCACTACTCAGAGTCAGCCCTCAGTATTCTACCCAAGCAGAGGCAGGTCATTaGATTCGATCCCCAGCACCA +
Preference number: 4 (lower is better)
Translates to: VLDIGYPLLRVSPQYSTQAEAGH*IRSPAP
Trigger: TGGTGCTGGGGATCGAATCCAATGACCTGCCTCTGC...TTGGGTAGAATACTGAGGGCTGACTCTGAGTAGTGGGTAACCAATGTCTAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp AGAATGACAGCATCCGCGTCAGCACAGGTCCATGAGATGCTTTGTTTACTGTTTGCAGAGGCAGGTCATTaGATTCGATCCCCAGCACCA +
Preference number: 4 (lower is better)
Translates to: RMTASASAQVHEMLCLLFAEAGH*IRSPAP
Trigger: TGGTGCTGGGGATCGAATCCAATGACCTGCCTCTGC...AAACAGTAAACAAAGCATCTCATGGACCTGTGCTGACGCGGATGCTGTCATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
CDS-3UTR TCA 90 bp GCCGTCACTGAGAGCACCCTCCATCCTGTCTCATTTTCCAATGAGAGCTGTCCTCTGACAGCATCTGGCTaGCATTTTAATAGGAACATC +
Preference number: 4 (lower is better)
Translates to: AVTESTLHPVSFSNESCPLTASG*HFNRNI
Trigger: GATGTTCCTATTAAAATGTCAGCCAGATGCTGTCAG...AGGACAGCTCTCATTGGAAAATGAGACAGGATGGAGGGTGCTCTCAGTGACGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR TCA 90 bp GCTTACACTTCCCTCCTGCCAGAAAGGTTACTTTCTTTTGATTCCTGGGAGACACTGCTGCTGCTTTCCTaGCAGCATCTGGCTGACATT +
Preference number: 4 (lower is better)
Translates to: AYTSLLPERLLSFDSWETLLLLS*QHLADI
Trigger: AATGTCAGCCAGATGCTGTCAGGAAAGCAGCAGCAG...TGTCTCCCAGGAATCAAAAGAAAGTAACCTTTCTGGCAGGAGGGAAGTGTAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR TCA 90 bp GAAACACTTTCCTTCTGGAATGTTCTAGACATTGGTTACCCACTACTCAGAGTCGATCCTCCAAAGCCATaGGAAGAGCTGCTGCCGCTG +
Preference number: 4 (lower is better)
Translates to: ETLSFWNVLDIGYPLLRVDPPKP*EELLPL
Trigger: CAGCGGCAGCAGCTCTTCTCATGGCTTTGGAGGATC...GACTCTGAGTAGTGGGTAACCAATGTCTAGAACATTCCAGAAGGAAAGTGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR TCA 90 bp CAGGAAACACTTTCCTTCTGGAATGTTCTAGACATTGGTTACCCACTACTCAGAGATCCTCCAAAGCCATaGGAAGAGCTGCTGCCGCTG +
Preference number: 4 (lower is better)
Translates to: QETLSFWNVLDIGYPLLRDPPKP*EELLPL
Trigger: CAGCGGCAGCAGCTCTTCTCATGGCTTTGGAGGATC...TCTGAGTAGTGGGTAACCAATGTCTAGAACATTCCAGAAGGAAAGTGTTTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR TCA 90 bp CTTACACTTCCCTCCTGCCAGAAAGGTTACTTTCTTTTGATTCCTGGGAGACAAGGCCAGCATGTTCACTaGCTGAGAGGTACGCTTCTC +
Preference number: 4 (lower is better)
Translates to: LTLPSCQKGYFLLIPGRQGQHVH*LRGTLL
Trigger: GAGAAGCGTACCTCTCAGTCAGTGAACATGCTGGCC...TTGTCTCCCAGGAATCAAAAGAAAGTAACCTTTCTGGCAGGAGGGAAGTGTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR TCA 90 bp ACACTTCCCTCCTGCCAGAAAGGTTACTTTCTTTTGATTCCTGGGAGACAATGTGGCCAGCATGTTCACTaGCTGAGAGGTACGCTTCTC +
Preference number: 4 (lower is better)
Translates to: TLPSCQKGYFLLIPGRQCGQHVH*LRGTLL
Trigger: GAGAAGCGTACCTCTCAGTCAGTGAACATGCTGGCC...ACATTGTCTCCCAGGAATCAAAAGAAAGTAACCTTTCTGGCAGGAGGGAAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR TCA 90 bp GCCGTCACTGAGAGCACCCTCCATCCTGTCTCATTTTCCAATGAGAGCTGTCCTTGTCTTCCAGATGCATaGTACAAAAATCAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: AVTESTLHPVSFSNESCPCLPDA*YKNQQG
Trigger: TCCCTGCTGATTTTTGTATCATGCATCTGGAAGACA...AGGACAGCTCTCATTGGAAAATGAGACAGGATGGAGGGTGCTCTCAGTGACGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR GCA 90 bp CTAGACATTGGTTACCCACTACTCAGAGTCAGCCCTCAGTATTCTACCCAACAGTCTGAATTCTCCCAGTaGTTCCATCAGACGGCTCAC +
Preference number: 4 (lower is better)
Translates to: LDIGYPLLRVSPQYSTQQSEFSQ*FHQTAH
Trigger: GTGAGCCGTCTGATGGAAGCACTGGGAGAATTCAGA...CTGTTGGGTAGAATACTGAGGGCTGACTCTGAGTAGTGGGTAACCAATGTCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR GCA 90 bp ACTTTCCTTCTGGAATGTTCTAGACATTGGTTACCCACTACTCAGAGTCAGCCCTCAGCTTCTCATCGCTaGTGGTTCCATGCAGCACCA +
Preference number: 4 (lower is better)
Translates to: TFLLECSRHWLPTTQSQPSASHR*WFHAAP
Trigger: TGGTGCTGCATGGAACCAGCAGCGATGAGAAGCTGA...GGGCTGACTCTGAGTAGTGGGTAACCAATGTCTAGAACATTCCAGAAGGAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR GCA 90 bp AGAATGACAGCATCCGCGTCAGCACAGGTCCATGAGATGCTTTGTTTACTGTTTTCAGCTTCTCATCGCTaGTGGTTCCATGCAGCACCA +
Preference number: 4 (lower is better)
Translates to: RMTASASAQVHEMLCLLFSASHR*WFHAAP
Trigger: TGGTGCTGCATGGAACCAGCAGCGATGAGAAGCTGA...AAACAGTAAACAAAGCATCTCATGGACCTGTGCTGACGCGGATGCTGTCATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp GCACGTCTGTCTAGTTTGACAGTGTTGCTTACACTTCCCTCCTGCCAGAAAGGTATTCTGCCCTCTGCTTaGCATATCAACAGGTGTGCT +
Preference number: 4 (lower is better)
Translates to: ARLSSLTVLLTLPSCQKGILPSA*HINRCA
Trigger: AGCACACCTGTTGATATGCCAAGCAGAGGGCAGAAT...ACCTTTCTGGCAGGAGGGAAGTGTAAGCAACACTGTCAAACTAGACAGACGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp TCTCACGCCTCTGCCGTCACTGAGAGCACCCTCCATCCTGTCTCATTTTCCAATCCAGAGAGGATTATATaGATGTGTTTTGGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: SHASAVTESTLHPVSFSNPERII*MCFGQH
Trigger: ATGCTGGCCAAAACACATCCATATAATCCTCTCTGG...ATTGGAAAATGAGACAGGATGGAGGGTGCTCTCAGTGACGGCAGAGGCGTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp TACCCACTACTCAGAGTCAGCCCTCAGTATTCTACCCAACAGCATGGGCACGTCCTCCCATTTATAACCTaGTCATCCTCACTGGGATTT +
Preference number: 4 (lower is better)
Translates to: YPLLRVSPQYSTQQHGHVLPFIT*SSSLGF
Trigger: AAATCCCAGTGAGGATGACCAGGTTATAAATGGGAG...GACGTGCCCATGCTGTTGGGTAGAATACTGAGGGCTGACTCTGAGTAGTGGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp GCTTACACTTCCCTCCTGCCAGAAAGGTTACTTTCTTTTGATTCCTGGGAGACATCAGGTTCTGCCTCTTaGAAGCCCATACTACTGGCC +
Preference number: 4 (lower is better)
Translates to: AYTSLLPERLLSFDSWETSGSAS*KPILLA
Trigger: GGCCAGTAGTATGGGCTTCCAAGAGGCAGAACCTGA...TGTCTCCCAGGAATCAAAAGAAAGTAACCTTTCTGGCAGGAGGGAAGTGTAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp AGAATGACAGCATCCGCGTCAGCACAGGTCCATGAGATGCTTTGTTTACTGTTTTCAGGTTCTGCCTCTTaGAAGCCCATACTACTGGCC +
Preference number: 4 (lower is better)
Translates to: RMTASASAQVHEMLCLLFSGSAS*KPILLA
Trigger: GGCCAGTAGTATGGGCTTCCAAGAGGCAGAACCTGA...AAACAGTAAACAAAGCATCTCATGGACCTGTGCTGACGCGGATGCTGTCATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp GCTCCCTGGCAAACAATGGTACCATGGAGCCAGGAAATGGAAAACAGCAAACAATGGGCACCTCACAGCTaGGAGGACTTGAAGAACAAT +
Preference number: 4 (lower is better)
Translates to: APWQTMVPWSQEMENSKQWAPHS*EDLKNN
Trigger: ATTGTTCTTCAAGTCCTCCCAGCTGTGAGGTGCCCA...TTGTTTGCTGTTTTCCATTTCCTGGCTCCATGGTACCATTGTTTGCCAGGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
CDS-3UTR TCA 90 bp TACACTTCCCTCCTGCCAGAAAGGTTACTTTCTTTTGATTCCTGGGAGACAATGCTGCTGCTGCTTTCCTaGCAGCATCTGGCTGACATT +
Preference number: 4 (lower is better)
Translates to: YTSLLPERLLSFDSWETMLLLLS*QHLADI
Trigger: AATGTCAGCCAGATGCTGTCAGGAAAGCAGCAGCAG...CATTGTCTCCCAGGAATCAAAAGAAAGTAACCTTTCTGGCAGGAGGGAAGTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR TCA 90 bp TCAGGAGCTGGTGAGGCCGAGTCCATGTGTAAACGAGAGAAGCCAGGAGAAAGAGGACCCAAATTGTACTaGTTTGTGTTCAGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: SGAGEAESMCKREKPGERGPKLY*FVFSFP
Trigger: TGGAAAACTGAACACAAATCAGTACAATTTGGGTCC...TCTTTCTCCTGGCTTCTCTCGTTTACACATGGACTCGGCCTCACCAGCTCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
CDS-3UTR TCA 90 bp ACACTTCCCTCCTGCCAGAAAGGTTACTTTCTTTTGATTCCTGGGAGACAATGTAGCATGTTCACTGACTaGGAGGTACGCTTCTCCGAG +
Preference number: 4 (lower is better)
Translates to: TLPSCQKGYFLLIPGRQCSMFTD*EVRFSE
Trigger: CTCGGAGAAGCGTACCTCTCAGTCAGTGAACATGCT...ACATTGTCTCCCAGGAATCAAAAGAAAGTAACCTTTCTGGCAGGAGGGAAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR TCA 90 bp TACACTTCCCTCCTGCCAGAAAGGTTACTTTCTTTTGATTCCTGGGAGACAATGAGCATGTTCACTGACTaGGAGGTACGCTTCTCCGAG +
Preference number: 4 (lower is better)
Translates to: YTSLLPERLLSFDSWETMSMFTD*EVRFSE
Trigger: CTCGGAGAAGCGTACCTCTCAGTCAGTGAACATGCT...CATTGTCTCCCAGGAATCAAAAGAAAGTAACCTTTCTGGCAGGAGGGAAGTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR TCA 90 bp CGTCTGTCTAGTTTGACAGTGTTGCTTACACTTCCCTCCTGCCAGAAAGGTTACGTAACCTGCCAGAAGTaGGCGGCCAAAATTTCTAAC +
Preference number: 4 (lower is better)
Translates to: RLSSLTVLLTLPSCQKGYVTCQK*AAKISN
Trigger: GTTAGAAATTTTGGCCGCTCACTTCTGGCAGGTTAC...GTAACCTTTCTGGCAGGAGGGAAGTGTAAGCAACACTGTCAAACTAGACAGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR TCA 90 bp TTGGTTACCCACTACTCAGAGTCAGCCCTCAGTATTCTACCCAACAGCATGGGCTGTCTTCCAGATGCATaGTACAAAAATCAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: LVTHYSESALSILPNSMGCLPDA*YKNQQG
Trigger: TCCCTGCTGATTTTTGTATCATGCATCTGGAAGACA...GCCCATGCTGTTGGGTAGAATACTGAGGGCTGACTCTGAGTAGTGGGTAACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR GCA 90 bp GACATTGGTTACCCACTACTCAGAGTCAGCCCTCAGTATTCTACCCAACAGCATTGCTTTCTGAGCTGCTaGCTCTTCCATCTTCTGAAC +
Preference number: 4 (lower is better)
Translates to: DIGYPLLRVSPQYSTQQHCFLSC*LFHLLN
Trigger: GTTCAGAAGATGGAAGAGGCAGCAGCTCAGAAAGCA...ATGCTGTTGGGTAGAATACTGAGGGCTGACTCTGAGTAGTGGGTAACCAATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR GCA 90 bp ACCCACTACTCAGAGTCAGCCCTCAGTATTCTACCCAACAGCATGGGCACGTCTTCAGAACATAAAGAATaGGCTGGACCAAATCCTTCT +
Preference number: 4 (lower is better)
Translates to: THYSESALSILPNSMGTSSEHKE*AGPNPS
Trigger: AGAAGGATTTGGTCCAGCGCATTCTTTATGTTCTGA...AGACGTGCCCATGCTGTTGGGTAGAATACTGAGGGCTGACTCTGAGTAGTGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR GCA 90 bp GCACGTCTGTCTAGTTTGACAGTGTTGCTTACACTTCCCTCCTGCCAGAAAGGTTCTGCTCTGGCCTCTTaGATCTGTTCTTTTCAGGTT +
Preference number: 4 (lower is better)
Translates to: ARLSSLTVLLTLPSCQKGSALAS*ICSFQV
Trigger: AACCTGAAAAGAACAGATGCAAGAGGCCAGAGCAGA...ACCTTTCTGGCAGGAGGGAAGTGTAAGCAACACTGTCAAACTAGACAGACGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR GCA 90 bp GAAACACTTTCCTTCTGGAATGTTCTAGACATTGGTTACCCACTACTCAGAGTCGTGGACCAGATCAGCTaGCAGGCACTGCTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: ETLSFWNVLDIGYPLLRVVDQIS*QALLQL
Trigger: AAGCTGAAGCAGTGCCTGGCAGCTGATCTGGTCCAC...GACTCTGAGTAGTGGGTAACCAATGTCTAGAACATTCCAGAAGGAAAGTGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp GCCGTCACTGAGAGCACCCTCCATCCTGTCTCATTTTCCAATGAGAGCTGTCCTACTAATCATCAGTTGTaGAGGAGATCGTATGTAGTG +
Preference number: 4 (lower is better)
Translates to: AVTESTLHPVSFSNESCPTNHQL*RRSYVV
Trigger: CACTACATACGATCTCCTCCACAACTGATGATTAGT...AGGACAGCTCTCATTGGAAAATGAGACAGGATGGAGGGTGCTCTCAGTGACGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp GAACAGGAAACACTTTCCTTCTGGAATGTTCTAGACATTGGTTACCCACTACTCGAGAAAAAGAAGTCCTaGAAATCCCGCTGGGCGGCC +
Preference number: 4 (lower is better)
Translates to: EQETLSFWNVLDIGYPLLEKKKS*KSRWAA
Trigger: GGCCGCCCAGCGGGATTTCCAGGACTTCTTTTTCTC...GAGTAGTGGGTAACCAATGTCTAGAACATTCCAGAAGGAAAGTGTTTCCTGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp CGTCTGTCTAGTTTGACAGTGTTGCTTACACTTCCCTCCTGCCAGAAAGGTTACTCAAACAGGGGGAAGTaGGAGAAAAAGAAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: RLSSLTVLLTLPSCQKGYSNRGK*EKKKSW
Trigger: CCAGGACTTCTTTTTCTCCCACTTCCCCCTGTTTGA...GTAACCTTTCTGGCAGGAGGGAAGTGTAAGCAACACTGTCAAACTAGACAGACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp GCTCCCTGGCAAACAATGGTACCATGGAGCCAGGAAATGGAAAACAGCAAACAATCCTACAGGAGATCATaGCCTTTTCGATTGCACCCT +
Preference number: 4 (lower is better)
Translates to: APWQTMVPWSQEMENSKQSYRRS*PFRLHP
Trigger: AGGGTGCAATCGAAAAGGCCATGATCTCCTGTAGGA...TTGTTTGCTGTTTTCCATTTCCTGGCTCCATGGTACCATTGTTTGCCAGGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp ATTGGTTACCCACTACTCAGAGTCAGCCCTCAGTATTCTACCCAACAGCATGGGCATGGTAAGCCAAACTaGTTCAGCTATCCTTGGAAC +
Preference number: 4 (lower is better)
Translates to: IGYPLLRVSPQYSTQQHGHGKPN*FSYPWN
Trigger: GTTCCAAGGATAGCTGAACCAGTTTGGCTTACCATG...CCCATGCTGTTGGGTAGAATACTGAGGGCTGACTCTGAGTAGTGGGTAACCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp ACACTTCCCTCCTGCCAGAAAGGTTACTTTCTTTTGATTCCTGGGAGACAATGTAACAGGCATGACAGTTaGTACCCAGGCCAGGTGGTA +
Preference number: 4 (lower is better)
Translates to: TLPSCQKGYFLLIPGRQCNRHDS*YPGQVV
Trigger: TACCACCTGGCCTGGGTACCAACTGTCATGCCTGTT...ACATTGTCTCCCAGGAATCAAAAGAAAGTAACCTTTCTGGCAGGAGGGAAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp CCTCTGCCGTCACTGAGAGCACCCTCCATCCTGTCTCATTTTCCAATGAGAGCTTATATGGATGTGTTTTaGCCAGCATGTTCACTGACT +
Preference number: 4 (lower is better)
Translates to: PLPSLRAPSILSHFPMRAYMDVF*PACSLT
Trigger: AGTCAGTGAACATGCTGGCCAAAACACATCCATATA...AGCTCTCATTGGAAAATGAGACAGGATGGAGGGTGCTCTCAGTGACGGCAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp TTGGTTACCCACTACTCAGAGTCAGCCCTCAGTATTCTACCCAACAGCATGGGCCCAGAGAGGATTATATaGATGTGTTTTGGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: LVTHYSESALSILPNSMGPERII*MCFGQH
Trigger: ATGCTGGCCAAAACACATCCATATAATCCTCTCTGG...GCCCATGCTGTTGGGTAGAATACTGAGGGCTGACTCTGAGTAGTGGGTAACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp GACATTGGTTACCCACTACTCAGAGTCAGCCCTCAGTATTCTACCCAACAGCATTGGACTGAAGTAAACTaGACACCTGACTGGAGACCA +
Preference number: 4 (lower is better)
Translates to: DIGYPLLRVSPQYSTQQHWTEVN*TPDWRP
Trigger: TGGTCTCCAGTCAGGTGTCCAGTTTACTTCAGTCCA...ATGCTGTTGGGTAGAATACTGAGGGCTGACTCTGAGTAGTGGGTAACCAATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR TCA 90 bp CAGGAAACACTTTCCTTCTGGAATGTTCTAGACATTGGTTACCCACTACTCAGAACATCCTCTGCTTTCTaGGCTGCTGCCTCTTCCATC +
Preference number: 4 (lower is better)
Translates to: QETLSFWNVLDIGYPLLRTSSAF*AAASSI
Trigger: GATGGAAGAGGCAGCAGCTCAGAAAGCAGAGGATGT...TCTGAGTAGTGGGTAACCAATGTCTAGAACATTCCAGAAGGAAAGTGTTTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR TCA 90 bp GTTCTAGACATTGGTTACCCACTACTCAGAGTCAGCCCTCAGTATTCTACCCAAGTAACCTGCCAGAAGTaGGCGGCCAAAATTTCTAAC +
Preference number: 4 (lower is better)
Translates to: VLDIGYPLLRVSPQYSTQVTCQK*AAKISN
Trigger: GTTAGAAATTTTGGCCGCTCACTTCTGGCAGGTTAC...TTGGGTAGAATACTGAGGGCTGACTCTGAGTAGTGGGTAACCAATGTCTAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR GCA 90 bp ACTTTCCTTCTGGAATGTTCTAGACATTGGTTACCCACTACTCAGAGTCAGCCCTGCTTTCTGAGCTGCTaGCTCTTCCATCTTCTGAAC +
Preference number: 4 (lower is better)
Translates to: TFLLECSRHWLPTTQSQPCFLSC*LFHLLN
Trigger: GTTCAGAAGATGGAAGAGGCAGCAGCTCAGAAAGCA...GGGCTGACTCTGAGTAGTGGGTAACCAATGTCTAGAACATTCCAGAAGGAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR GCA 90 bp TACACTTCCCTCCTGCCAGAAAGGTTACTTTCTTTTGATTCCTGGGAGACAATGCTCTGCTTTCTGAGCTaGTGCCTCTTCCATCTTCTG +
Preference number: 4 (lower is better)
Translates to: YTSLLPERLLSFDSWETMLCFLS*CLFHLL
Trigger: CAGAAGATGGAAGAGGCAGCAGCTCAGAAAGCAGAG...CATTGTCTCCCAGGAATCAAAAGAAAGTAACCTTTCTGGCAGGAGGGAAGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR GCA 90 bp GCTTACACTTCCCTCCTGCCAGAAAGGTTACTTTCTTTTGATTCCTGGGAGACACTTCATTCTGCCCTCTaGTTGGCATATCAACAGGTG +
Preference number: 4 (lower is better)
Translates to: AYTSLLPERLLSFDSWETLHSAL*LAYQQV
Trigger: CACCTGTTGATATGCCAAGCAGAGGGCAGAATGAAG...TGTCTCCCAGGAATCAAAAGAAAGTAACCTTTCTGGCAGGAGGGAAGTGTAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR GCA 90 bp ACACTTCCCTCCTGCCAGAAAGGTTACTTTCTTTTGATTCCTGGGAGACAATGTAAGCTGATCGAGCAATaGCGCTGTCCCTGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: TLPSCQKGYFLLIPGRQCKLIEQ*RCPCLH
Trigger: ATGAAGACAGGGACAGCGGCATTGCTCGATCAGCTT...ACATTGTCTCCCAGGAATCAAAAGAAAGTAACCTTTCTGGCAGGAGGGAAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR GCA 90 bp CTTACACTTCCCTCCTGCCAGAAAGGTTACTTTCTTTTGATTCCTGGGAGACAACGAACTGTCAGGTTCTaGCTCTTGGAAGCCCATACT +
Preference number: 4 (lower is better)
Translates to: LTLPSCQKGYFLLIPGRQRTVRF*LLEAHT
Trigger: AGTATGGGCTTCCAAGAGGCAGAACCTGACAGTTCG...TTGTCTCCCAGGAATCAAAAGAAAGTAACCTTTCTGGCAGGAGGGAAGTGTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR GCA 90 bp GTTCTAGACATTGGTTACCCACTACTCAGAGTCAGCCCTCAGTATTCTACCCAAAACAGGTGTGCTGTGTaGTGCAAAGAAAGAAGCGCT +
Preference number: 4 (lower is better)
Translates to: VLDIGYPLLRVSPQYSTQNRCAV*CKERSA
Trigger: AGCGCTTCTTTCTTTGCAGCACACAGCACACCTGTT...TTGGGTAGAATACTGAGGGCTGACTCTGAGTAGTGGGTAACCAATGTCTAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp GAAACACTTTCCTTCTGGAATGTTCTAGACATTGGTTACCCACTACTCAGAGTCGGATGTAGAAGAGCTTaGAGACGGGAAGGGCGTGAT +
Preference number: 4 (lower is better)
Translates to: ETLSFWNVLDIGYPLLRVGCRRA*RREGRD
Trigger: ATCACGCCCTTCCCGTCTCCAAGCTCTTCTACATCC...GACTCTGAGTAGTGGGTAACCAATGTCTAGAACATTCCAGAAGGAAAGTGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp ATTGGTTACCCACTACTCAGAGTCAGCCCTCAGTATTCTACCCAACAGCATGGGATGGAACTCCCAATGTaGAAAGTGACCTTTTCGACA +
Preference number: 4 (lower is better)
Translates to: IGYPLLRVSPQYSTQQHGMELPM*KVTFST
Trigger: TGTCGAAAAGGTCACTTTCCACATTGGGAGTTCCAT...CCCATGCTGTTGGGTAGAATACTGAGGGCTGACTCTGAGTAGTGGGTAACCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp AGAATGACAGCATCCGCGTCAGCACAGGTCCATGAGATGCTTTGTTTACTGTTTGCTCCTCCATTCTTTTaGTCCGGCTTTCAAAGTCAG +
Preference number: 4 (lower is better)
Translates to: RMTASASAQVHEMLCLLFAPPFF*SGFQSQ
Trigger: CTGACTTTGAAAGCCGGACCAAAAGAATGGAGGAGC...AAACAGTAAACAAAGCATCTCATGGACCTGTGCTGACGCGGATGCTGTCATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
CDS-3UTR TCA 90 bp GTTCTAGACATTGGTTACCCACTACTCAGAGTCAGCCCTCAGTATTCTACCCAAAAATGTCTCATCAGTTaGCCTCCTTGGAAAGATGCC +
Preference number: 4 (lower is better)
Translates to: VLDIGYPLLRVSPQYSTQKCLIS*PPWKDA
Trigger: GGCATCTTTCCAAGGAGGTCAACTGATGAGACATTT...TTGGGTAGAATACTGAGGGCTGACTCTGAGTAGTGGGTAACCAATGTCTAGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR TCA 90 bp ACACTTCCCTCCTGCCAGAAAGGTTACTTTCTTTTGATTCCTGGGAGACAATGTCTGGACTCGGAGACTTaGTTCAGAGATCTTCCTACA +
Preference number: 4 (lower is better)
Translates to: TLPSCQKGYFLLIPGRQCLDSET*FRDLPT
Trigger: TGTAGGAAGATCTCTGAATCAAGTCTCCGAGTCCAG...ACATTGTCTCCCAGGAATCAAAAGAAAGTAACCTTTCTGGCAGGAGGGAAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR TCA 90 bp CAGGAAACACTTTCCTTCTGGAATGTTCTAGACATTGGTTACCCACTACTCAGAAGTAAACTGGACACCTaGCTGGAGACCAAGACATCC +
Preference number: 4 (lower is better)
Translates to: QETLSFWNVLDIGYPLLRSKLDT*LETKTS
Trigger: GGATGTCTTGGTCTCCAGTCAGGTGTCCAGTTTACT...TCTGAGTAGTGGGTAACCAATGTCTAGAACATTCCAGAAGGAAAGTGTTTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR GCA 90 bp ACACTTCCCTCCTGCCAGAAAGGTTACTTTCTTTTGATTCCTGGGAGACAATGTTCCCTGTCTTCATTCTaGCCTCTGCTTGGCATATCA +
Preference number: 4 (lower is better)
Translates to: TLPSCQKGYFLLIPGRQCSLSSF*PLLGIS
Trigger: TGATATGCCAAGCAGAGGGCAGAATGAAGACAGGGA...ACATTGTCTCCCAGGAATCAAAAGAAAGTAACCTTTCTGGCAGGAGGGAAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR GCA 90 bp ACTACTCAGAGTCAGCCCTCAGTATTCTACCCAACAGCATGGGCACGTCTGTCTAAAATTTCTAACATTTaGCTTGCTGGTGCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: TTQSQPSVFYPTAWARLSKISNI*LAGALR
Trigger: TCTCAGAGCACCAGCAAGGCAAATGTTAGAAATTTT...AGACAGACGTGCCCATGCTGTTGGGTAGAATACTGAGGGCTGACTCTGAGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR GCA 90 bp AAAGGTTACTTTCTTTTGATTCCTGGGAGACAATGTCGACTGTTCCTGAACAATTCGCTGCTGGTTCCATaGAGCACCAGATCAGGCATG +
Preference number: 4 (lower is better)
Translates to: KGYFLLIPGRQCRLFLNNSLLVP*STRSGM
Trigger: CATGCCTGATCTGGTGCTGCATGGAACCAGCAGCGA...ATTGTTCAGGAACAGTCGACATTGTCTCCCAGGAATCAAAAGAAAGTAACCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR GCA 90 bp ACTACTCAGAGTCAGCCCTCAGTATTCTACCCAACAGCATGGGCACGTCTGTCTAGTCTGTCTTCCAGATaGATGATACAAAAATCAGCA +
Preference number: 4 (lower is better)
Translates to: TTQSQPSVFYPTAWARLSSLSSR*MIQKSA
Trigger: TGCTGATTTTTGTATCATGCATCTGGAAGACAGACT...AGACAGACGTGCCCATGCTGTTGGGTAGAATACTGAGGGCTGACTCTGAGTAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp GCACGTCTGTCTAGTTTGACAGTGTTGCTTACACTTCCCTCCTGCCAGAAAGGTTATATGGATGTGTTTTaGCCAGCATGTTCACTGACT +
Preference number: 4 (lower is better)
Translates to: ARLSSLTVLLTLPSCQKGYMDVF*PACSLT
Trigger: AGTCAGTGAACATGCTGGCCAAAACACATCCATATA...ACCTTTCTGGCAGGAGGGAAGTGTAAGCAACACTGTCAAACTAGACAGACGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp GCTCCCTGGCAAACAATGGTACCATGGAGCCAGGAAATGGAAAACAGCAAACAACTCCCATTTATAACCTaGTCATCCTCACTGGGATTT +
Preference number: 4 (lower is better)
Translates to: APWQTMVPWSQEMENSKQLPFIT*SSSLGF
Trigger: AAATCCCAGTGAGGATGACCAGGTTATAAATGGGAG...TTGTTTGCTGTTTTCCATTTCCTGGCTCCATGGTACCATTGTTTGCCAGGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp CTTACACTTCCCTCCTGCCAGAAAGGTTACTTTCTTTTGATTCCTGGGAGACAACTCGGAATTCTGCTCTaGCCTCTTGCATCTGTTCTT +
Preference number: 4 (lower is better)
Translates to: LTLPSCQKGYFLLIPGRQLGILL*PLASVL
Trigger: AAGAACAGATGCAAGAGGCCAGAGCAGAATTCCGAG...TTGTCTCCCAGGAATCAAAAGAAAGTAACCTTTCTGGCAGGAGGGAAGTGTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp GCTTACACTTCCCTCCTGCCAGAAAGGTTACTTTCTTTTGATTCCTGGGAGACACTTGAAGAACAATCCTaGGTTGCCTCTTGGTCATTC +
Preference number: 4 (lower is better)
Translates to: AYTSLLPERLLSFDSWETLEEQS*VASWSF
Trigger: GAATGACCAAGAGGCAACCCAGGATTGTTCTTCAAG...TGTCTCCCAGGAATCAAAAGAAAGTAACCTTTCTGGCAGGAGGGAAGTGTAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp GTAATGAGGAGACAGACATGTCACATGGATCAGGATTTGCTGTCCCACATTCTCCTTGAAGAACAATCCTaGGTTGCCTCTTGGTCATTC +
Preference number: 4 (lower is better)
Translates to: VMRRQTCHMDQDLLSHILLEEQS*VASWSF
Trigger: GAATGACCAAGAGGCAACCCAGGATTGTTCTTCAAG...GAGAATGTGGGACAGCAAATCCTGATCCATGTGACATGTCTGTCTCCTCATTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp GAAACACTTTCCTTCTGGAATGTTCTAGACATTGGTTACCCACTACTCAGAGTCGAGTGGAGGGTTTGTTaGTCCATCCTCCTTCTTACC +
Preference number: 4 (lower is better)
Translates to: ETLSFWNVLDIGYPLLRVEWRVC*SILLLT
Trigger: GGTAAGAAGGAGGATGGACCAACAAACCCTCCACTC...GACTCTGAGTAGTGGGTAACCAATGTCTAGAACATTCCAGAAGGAAAGTGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR TCA 90 bp GTTCTAGACATTGGTTACCCACTACTCAGAGTCAGCCCTCAGTATTCTACCCAATTTCTCCAAGGTGTTTaGCATCATGGTAAGCCAAAC +
Preference number: 4 (lower is better)
Translates to: VLDIGYPLLRVSPQYSTQFLQGV*HHGKPN
Trigger: GTTTGGCTTACCATGATGTCAAACACCTTGGAGAAA...TTGGGTAGAATACTGAGGGCTGACTCTGAGTAGTGGGTAACCAATGTCTAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR TCA 90 bp ACTTTCCTTCTGGAATGTTCTAGACATTGGTTACCCACTACTCAGAGTCAGCCCTTTCTCCAAGGTGTTTaGCATCATGGTAAGCCAAAC +
Preference number: 4 (lower is better)
Translates to: TFLLECSRHWLPTTQSQPFLQGV*HHGKPN
Trigger: GTTTGGCTTACCATGATGTCAAACACCTTGGAGAAA...GGGCTGACTCTGAGTAGTGGGTAACCAATGTCTAGAACATTCCAGAAGGAAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp TATGACAGAATGACAGCATCCGCGTCAGCACAGGTCCATGAGATGCTTTGTTTAAGTGTATCTTCAGGGTaGAGCCTTTGTAACTCATTG +
Preference number: 4 (lower is better)
Translates to: YDRMTASASAQVHEMLCLSVSSG*SLCNSL
Trigger: CAATGAGTTACAAAGGCTCCACCCTGAAGATACACT...TAAACAAAGCATCTCATGGACCTGTGCTGACGCGGATGCTGTCATTCTGTCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp AAAGGTTACTTTCTTTTGATTCCTGGGAGACAATGTCGACTGTTCCTGAACAATGGATGTAGAAGAGCTTaGAGACGGGAAGGGCGTGAT +
Preference number: 4 (lower is better)
Translates to: KGYFLLIPGRQCRLFLNNGCRRA*RREGRD
Trigger: ATCACGCCCTTCCCGTCTCCAAGCTCTTCTACATCC...ATTGTTCAGGAACAGTCGACATTGTCTCCCAGGAATCAAAAGAAAGTAACCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp GCTTACACTTCCCTCCTGCCAGAAAGGTTACTTTCTTTTGATTCCTGGGAGACACCTTCTAACCATAGCTaGATTAGAGCTACACGTTTC +
Preference number: 4 (lower is better)
Translates to: AYTSLLPERLLSFDSWETPSNHS*IRATRF
Trigger: GAAACGTGTAGCTCTAATCCAGCTATGGTTAGAAGG...TGTCTCCCAGGAATCAAAAGAAAGTAACCTTTCTGGCAGGAGGGAAGTGTAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp CAGGAAACACTTTCCTTCTGGAATGTTCTAGACATTGGTTACCCACTACTCAGAGCTTTAATGGGAGGGTaGTCAACAGGCATGACAGTT +
Preference number: 4 (lower is better)
Translates to: QETLSFWNVLDIGYPLLRALMGG*STGMTV
Trigger: AACTGTCATGCCTGTTGACCACCCTCCCATTAAAGC...TCTGAGTAGTGGGTAACCAATGTCTAGAACATTCCAGAAGGAAAGTGTTTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp GCTTACACTTCCCTCCTGCCAGAAAGGTTACTTTCTTTTGATTCCTGGGAGACAATGGAACTCCCAATGTaGAAAGTGACCTTTTCGACA +
Preference number: 4 (lower is better)
Translates to: AYTSLLPERLLSFDSWETMELPM*KVTFST
Trigger: TGTCGAAAAGGTCACTTTCCACATTGGGAGTTCCAT...TGTCTCCCAGGAATCAAAAGAAAGTAACCTTTCTGGCAGGAGGGAAGTGTAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR GCA 90 bp CGTCTGTCTAGTTTGACAGTGTTGCTTACACTTCCCTCCTGCCAGAAAGGTTACTATTCGAAGCTGTCCTaGAGATTATTTGTACTTCCA +
Preference number: 4 (lower is better)
Translates to: RLSSLTVLLTLPSCQKGYYSKLS*RLFVLP
Trigger: TGGAAGTACAAATAATCTGCAGGACAGCTTCGAATA...GTAACCTTTCTGGCAGGAGGGAAGTGTAAGCAACACTGTCAAACTAGACAGACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR GCA 90 bp ACTTTCCTTCTGGAATGTTCTAGACATTGGTTACCCACTACTCAGAGTCAGCCCTCAGAACATAAAGAATaGGCTGGACCAAATCCTTCT +
Preference number: 4 (lower is better)
Translates to: TFLLECSRHWLPTTQSQPSEHKE*AGPNPS
Trigger: AGAAGGATTTGGTCCAGCGCATTCTTTATGTTCTGA...GGGCTGACTCTGAGTAGTGGGTAACCAATGTCTAGAACATTCCAGAAGGAAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp GAAACACTTTCCTTCTGGAATGTTCTAGACATTGGTTACCCACTACTCAGAGTCCGTGTATTGGTACTTTaGAAGCTGTTGCTTAGCGTG +
Preference number: 4 (lower is better)
Translates to: ETLSFWNVLDIGYPLLRVRVLVL*KLLLSV
Trigger: CACGCTAAGCAACAGCTTCCAAAGTACCAATACACG...GACTCTGAGTAGTGGGTAACCAATGTCTAGAACATTCCAGAAGGAAAGTGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp CAGGAAACACTTTCCTTCTGGAATGTTCTAGACATTGGTTACCCACTACTCAGACGTGTATTGGTACTTTaGAAGCTGTTGCTTAGCGTG +
Preference number: 4 (lower is better)
Translates to: QETLSFWNVLDIGYPLLRRVLVL*KLLLSV
Trigger: CACGCTAAGCAACAGCTTCCAAAGTACCAATACACG...TCTGAGTAGTGGGTAACCAATGTCTAGAACATTCCAGAAGGAAAGTGTTTCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp CGTCTGTCTAGTTTGACAGTGTTGCTTACACTTCCCTCCTGCCAGAAAGGTTACTATAGAGCTGTAAGATaGACTGAAGTAAACTGGACA +
Preference number: 4 (lower is better)
Translates to: RLSSLTVLLTLPSCQKGYYRAVR*TEVNWT
Trigger: TGTCCAGTTTACTTCAGTCCATCTTACAGCTCTATA...GTAACCTTTCTGGCAGGAGGGAAGTGTAAGCAACACTGTCAAACTAGACAGACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR TCA 90 bp CTTACACTTCCCTCCTGCCAGAAAGGTTACTTTCTTTTGATTCCTGGGAGACAAGGACCCAAATTGTACTaGTTTGTGTTCAGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: LTLPSCQKGYFLLIPGRQGPKLY*FVFSFP
Trigger: TGGAAAACTGAACACAAATCAGTACAATTTGGGTCC...TTGTCTCCCAGGAATCAAAAGAAAGTAACCTTTCTGGCAGGAGGGAAGTGTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR TCA 90 bp ACACTTCCCTCCTGCCAGAAAGGTTACTTTCTTTTGATTCCTGGGAGACAATGTTTCTTTTCAGGTTTGTaGCCCAGTTCGCTAGTATTA +
Preference number: 4 (lower is better)
Translates to: TLPSCQKGYFLLIPGRQCFFSGL*PSSLVL
Trigger: TAATACTAGCGAACTGGGTCACAAACCTGAAAAGAA...ACATTGTCTCCCAGGAATCAAAAGAAAGTAACCTTTCTGGCAGGAGGGAAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR GCA 90 bp AAAGGTTACTTTCTTTTGATTCCTGGGAGACAATGTCGACTGTTCCTGAACAATTCCCTGTCTTCATTCTaGCCTCTGCTTGGCATATCA +
Preference number: 4 (lower is better)
Translates to: KGYFLLIPGRQCRLFLNNSLSSF*PLLGIS
Trigger: TGATATGCCAAGCAGAGGGCAGAATGAAGACAGGGA...ATTGTTCAGGAACAGTCGACATTGTCTCCCAGGAATCAAAAGAAAGTAACCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR GCA 90 bp GCTTACACTTCCCTCCTGCCAGAAAGGTTACTTTCTTTTGATTCCTGGGAGACAAAAATTTCTAACATTTaGCTTGCTGGTGCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: AYTSLLPERLLSFDSWETKISNI*LAGALR
Trigger: TCTCAGAGCACCAGCAAGGCAAATGTTAGAAATTTT...TGTCTCCCAGGAATCAAAAGAAAGTAACCTTTCTGGCAGGAGGGAAGTGTAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR GCA 90 bp ACTTTCCTTCTGGAATGTTCTAGACATTGGTTACCCACTACTCAGAGTCAGCCCAGTCTGTCTTCCAGATaGATGATACAAAAATCAGCA +
Preference number: 4 (lower is better)
Translates to: TFLLECSRHWLPTTQSQPSLSSR*MIQKSA
Trigger: TGCTGATTTTTGTATCATGCATCTGGAAGACAGACT...GGGCTGACTCTGAGTAGTGGGTAACCAATGTCTAGAACATTCCAGAAGGAAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp GAAACACTTTCCTTCTGGAATGTTCTAGACATTGGTTACCCACTACTCAGAGTCCCTTCTAACCATAGCTaGATTAGAGCTACACGTTTC +
Preference number: 4 (lower is better)
Translates to: ETLSFWNVLDIGYPLLRVPSNHS*IRATRF
Trigger: GAAACGTGTAGCTCTAATCCAGCTATGGTTAGAAGG...GACTCTGAGTAGTGGGTAACCAATGTCTAGAACATTCCAGAAGGAAAGTGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp TCAGTTGGGTTTTTACAGTTCGTCACTTTGGTAAGTTTTACAAATGGTCAAGTTAACAGGCATGACAGTTaGTACCCAGGCCAGGTGGTA +
Preference number: 4 (lower is better)
Translates to: SVGFLQFVTLVSFTNGQVNRHDS*YPGQVV
Trigger: TACCACCTGGCCTGGGTACCAACTGTCATGCCTGTT...AACTTGACCATTTGTAAAACTTACCAAAGTGACGAACTGTAAAAACCCAACTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
CDS-3UTR TCA 90 bp AAAGGTTACTTTCTTTTGATTCCTGGGAGACAATGTCGACTGTTCCTGAACAATAAATGTCTCATCAGTTaGCCTCCTTGGAAAGATGCC +
Preference number: 4 (lower is better)
Translates to: KGYFLLIPGRQCRLFLNNKCLIS*PPWKDA
Trigger: GGCATCTTTCCAAGGAGGTCAACTGATGAGACATTT...ATTGTTCAGGAACAGTCGACATTGTCTCCCAGGAATCAAAAGAAAGTAACCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR TCA 90 bp TCAGTTGGGTTTTTACAGTTCGTCACTTTGGTAAGTTTTACAAATGGTCAAGTTTTTCAAAGTCAGCTTTaGAGGAGCACCCAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: SVGFLQFVTLVSFTNGQVFQSQL*RSTQSP
Trigger: AGGGCTCTGGGTGCTCCTTCAAAGCTGACTTTGAAA...AACTTGACCATTTGTAAAACTTACCAAAGTGACGAACTGTAAAAACCCAACTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
CDS-3UTR CCA 90 bp CAGGAAACACTTTCCTTCTGGAATGTTCTAGACATTGGTTACCCACTACTCAGATATAGAGCTGTAAGATaGACTGAAGTAAACTGGACA +
Preference number: 4 (lower is better)
Translates to: QETLSFWNVLDIGYPLLRYRAVR*TEVNWT
Trigger: TGTCCAGTTTACTTCAGTCCATCTTACAGCTCTATA...TCTGAGTAGTGGGTAACCAATGTCTAGAACATTCCAGAAGGAAAGTGTTTCCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR TCA 90 bp TCAGTTGGGTTTTTACAGTTCGTCACTTTGGTAAGTTTTACAAATGGTCAAGTTTTCTTTTCAGGTTTGTaGCCCAGTTCGCTAGTATTA +
Preference number: 4 (lower is better)
Translates to: SVGFLQFVTLVSFTNGQVFFSGL*PSSLVL
Trigger: TAATACTAGCGAACTGGGTCACAAACCTGAAAAGAA...AACTTGACCATTTGTAAAACTTACCAAAGTGACGAACTGTAAAAACCCAACTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
CDS GCA 90 bp ACTGAAGGCCGGCTCCTCCTTGGGCGGCCGGGCCTGGGCAGACGCTaGGCCGCCGCCCCTTTTGTTGAAGAGCTTCTGGAGCAGGGTCGG +
Preference number: 5 (lower is better)
Translates to: TEGRLLLGRPGLGRR*AAAPFVEELLEQGR
Trigger: CCGACCCTGCTCCAGAAGCTCTTCAACAAAAGGGGCGGCGGCGCAGCGTCTGCCCAGGCCCGGCCGCCCAAGGAGGAGCCGGCCTTCAGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS TCA 90 bp CTAGCAGGCGGATGTCACTCAAGCCAAACTCCGAACACGACCAACTaGAGGCCGGCTCCTCCTTGGGCGGCCGGGCCTGGGCAGACGCTG +
Preference number: 5 (lower is better)
Translates to: LAGGCHSSQTPNTTN*RPAPPWAAGPGQTL
Trigger: CAGCGTCTGCCCAGGCCCGGCCGCCCAAGGAGGAGCCGGCCTTCAGTTGGTCGTGTTCGGAGTTTGGCTTGAGTGACATCCGCCTGCTAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CAA 90 bp GCCTCTGCCGTCACTGAGAGCACCCTCCATCCTGTCTCATTTTCCAATGAGAGCAAGGCCGGCTCCTCCTaGGGCGGCCGGGCCTGGGCA +
Preference number: 5 (lower is better)
Translates to: ASAVTESTLHPVSFSNESKAGSS*GGRAWA
Trigger: TGCCCAGGCCCGGCCGCCCAAGGAGGAGCCGGCCTT...GCTCTCATTGGAAAATGAGACAGGATGGAGGGTGCTCTCAGTGACGGCAGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS CCA 90 bp AACTGGACACCTGACTGGAGACCAAGACATCCTGGCCCAGCTTCATaGTGTCCGTCACCTTCCGCTGACTCGTGGCCACCTGGACAGTCC +
Preference number: 5 (lower is better)
Translates to: NWTPDWRPRHPGPAS*CPSPSADSWPPGQS
Trigger: GGACTGTCCAGGTGGCCACGAGTCAGCGGAAGGTGACGGACACCATGAAGCTGGGCCAGGATGTCTTGGTCTCCAGTCAGGTGTCCAGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS GCA 90 bp GGCCAGGCTGCGGACTGCTCTGCTCGCTTCTTTAGCGTCTCCCCATaGAGCTTCGAGTGGAGGGTTTGTTGGTCCATCCTCCTTCTTACC +
Preference number: 5 (lower is better)
Translates to: GQAADCSARFFSVSP*SFEWRVCWSILLLT
Trigger: GGTAAGAAGGAGGATGGACCAACAAACCCTCCACTCGAAGCTGCATGGGGAGACGCTAAAGAAGCGAGCAGAGCAGTCCGCAGCCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS GCA 90 bp GGGCTCATCGAGTACTGGATGGTGCACCGTGTGGACCAGATCAGCTaGCAGGCACTGCTTCAGCTTCTCATCGCTGCTGGTTCCATGCAG +
Preference number: 5 (lower is better)
Translates to: GLIEYWMVHRVDQIS*QALLQLLIAAGSMQ
Trigger: CTGCATGGAACCAGCAGCGATGAGAAGCTGAAGCAGTGCCTGGCAGCTGATCTGGTCCACACGGTGCACCATCCAGTACTCGATGAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS CCA 90 bp GAACTCCCAATGTGGAAAGTGACCTTTTCGACAGGAGGATCCTCCTaGGAATGCCTGTCTGGGCAGGGCCAGGCTGCGGACTGCTCTGCT +
Preference number: 5 (lower is better)
Translates to: ELPMWKVTFSTGGSS*ECLSGQGQAADCSA
Trigger: AGCAGAGCAGTCCGCAGCCTGGCCCTGCCCAGACAGGCATTCCCAGGAGGATCCTCCTGTCGAAAAGGTCACTTTCCACATTGGGAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CAA 90 bp CAAAGGACACGTCATCGTCATCGCCCGCACCGGGGGAGCCAGGAGAAGAGCAGCCATTTTCCAAACTCGTaGTCTGACTTCGGAGCCAGC +
Preference number: 5 (lower is better)
Translates to: QRTRHRHRPHRGSQEKSSHFPNS*SDFGAS
Trigger: GCTGGCTCCGAAGTCAGACAACGAGTTTGGAAAATG...GCTGCTCTTCTCCTGGCTCCCCCGGTGCGGGCGATGACGATGACGTGTCCTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
CDS-3UTR CAA 90 bp CAAAGGACACGTCATCGTCATCGCCCGCACCGGGGGAGCCAGGAGAAGAGCAGCCGCTCCTCCATTCTTTaGGTCCGGCTTTCAAAGTCA +
Preference number: 5 (lower is better)
Translates to: QRTRHRHRPHRGSQEKSSRSSIL*VRLSKS
Trigger: TGACTTTGAAAGCCGGACCAAAAGAATGGAGGAGCG...GCTGCTCTTCTCCTGGCTCCCCCGGTGCGGGCGATGACGATGACGTGTCCTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
CDS TCA 90 bp ACCAAGACATCCTGGCCCAGCTTCATGGTGTCCGTCACCTTCCGCTaGCTCGTGGCCACCTGGACAGTCCACTTGTCAGTGTCTGCAATG +
Preference number: 5 (lower is better)
Translates to: TKTSWPSFMVSVTFR*LVATWTVHLSVSAM
Trigger: CATTGCAGACACTGACAAGTGGACTGTCCAGGTGGCCACGAGTCAGCGGAAGGTGACGGACACCATGAAGCTGGGCCAGGATGTCTTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS CCA 90 bp CGCTTCTTTAGCGTCTCCCCATGCAGCTTCGAGTGGAGGGTTTGTTaGTCCATCCTCCTTCTTACCCTGGGCACCTCACAGCTGGGAGGA +
Preference number: 5 (lower is better)
Translates to: RFFSVSPCSFEWRVC*SILLLTLGTSQLGG
Trigger: TCCTCCCAGCTGTGAGGTGCCCAGGGTAAGAAGGAGGATGGACCAACAAACCCTCCACTCGAAGCTGCATGGGGAGACGCTAAAGAAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS CCA 90 bp CGTTCCTGGGAATGTCTCCTTCGCTCCTGTAGTTGCCCTTACCACTaGCATCCCCATAGGGGACATCTGCAGCAATCAGCAGGCCACCCT +
Preference number: 5 (lower is better)
Translates to: RSWECLLRSCSCPYH*HPHRGHLQQSAGHP
Trigger: AGGGTGGCCTGCTGATTGCTGCAGATGTCCCCTATGGGGATGCCAGTGGTAAGGGCAACTACAGGAGCGAAGGAGACATTCCCAGGAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CAA 90 bp GCCTCTGCCGTCACTGAGAGCACCCTCCATCCTGTCTCATTTTCCAATGAGAGCTCCCCTGTGGTAGGATaGGTGGTACCAGGGCAGGCT +
Preference number: 5 (lower is better)
Translates to: ASAVTESTLHPVSFSNESSPVVG*VVPGQA
Trigger: AGCCTGCCCTGGTACCACCAATCCTACCACAGGGGA...GCTCTCATTGGAAAATGAGACAGGATGGAGGGTGCTCTCAGTGACGGCAGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS TCA 90 bp TATCAACAGGTGTGCTGTGTGCTGCAAAGAAAGAAGCGCTCCGGGTaGGCCGGAGAGGTCCTCCTTCAGACAACCCCTGCAGCAGTTTGC +
Preference number: 5 (lower is better)
Translates to: YQQVCCVLQRKKRSG*AGEVLLQTTPAAVC
Trigger: GCAAACTGCTGCAGGGGTTGTCTGAAGGAGGACCTCTCCGGCTCACCCGGAGCGCTTCTTTCTTTGCAGCACACAGCACACCTGTTGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
CDS GCA 90 bp TGTGGACCAGATCAGCTGCCAGGCACTGCTTCAGCTTCTCATCGCTaGTGGTTCCATGCAGCACCAGATCAGGCATGTACGTGGCACAGT +
Preference number: 5 (lower is better)
Translates to: CGPDQLPGTASASHR*WFHAAPDQACTWHS
Trigger: ACTGTGCCACGTACATGCCTGATCTGGTGCTGCATGGAACCAGCAGCGATGAGAAGCTGAAGCAGTGCCTGGCAGCTGATCTGGTCCACA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS GCA 90 bp AGTACTGGATGGTGCACCGTGTGGACCAGATCAGCTGCCAGGCACTaGTTCAGCTTCTCATCGCTGCTGGTTCCATGCAGCACCAGATCA +
Preference number: 5 (lower is better)
Translates to: STGWCTVWTRSAARH*FSFSSLLVPCSTRS
Trigger: TGATCTGGTGCTGCATGGAACCAGCAGCGATGAGAAGCTGAAGCAGTGCCTGGCAGCTGATCTGGTCCACACGGTGCACCATCCAGTACT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS CCA 90 bp CCACTTTCTGCGGCACAAAGGGAATGTGCAAGGGGGCCATCAACTTaGCTAAGTTGTCCCACAGCATGTGTCATGTTGGCCCGGAGGCCT +
Preference number: 5 (lower is better)
Translates to: PLSAAQRECARGPST*LSCPTACVMLARRP
Trigger: AGGCCTCCGGGCCAACATGACACATGCTGTGGGACAACTTAGCCAAGTTGATGGCCCCCTTGCACATTCCCTTTGTGCCGCAGAAAGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS CCA 90 bp GGACCAGATCAGCTGCCAGGCACTGCTTCAGCTTCTCATCGCTGCTaGTTCCATGCAGCACCAGATCAGGCATGTACGTGGCACAGTAAC +
Preference number: 5 (lower is better)
Translates to: GPDQLPGTASASHRC*FHAAPDQACTWHSN
Trigger: GTTACTGTGCCACGTACATGCCTGATCTGGTGCTGCATGGAACCAGCAGCGATGAGAAGCTGAAGCAGTGCCTGGCAGCTGATCTGGTCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CAA 90 bp GAGGGGTGCCTGCTCCGTGTTCTCACGCCTCTGCCGTCACTGAGAGCACCCTCCTGTCCTGCAGATTATTaGTACTTCCACAGAAGCTAC +
Preference number: 5 (lower is better)
Translates to: EGCLLRVLTPLPSLRAPSCPADY*YFHRSY
Trigger: GTAGCTTCTGTGGAAGTACAAATAATCTGCAGGACA...GGAGGGTGCTCTCAGTGACGGCAGAGGCGTGAGAACACGGAGCAGGCACCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CAA 90 bp TGCCTGCTCCGTGTTCTCACGCCTCTGCCGTCACTGAGAGCACCCTCCATCCTGACTGGACTCGGAGACTaGATTCAGAGATCTTCCTAC +
Preference number: 5 (lower is better)
Translates to: CLLRVLTPLPSLRAPSILTGLGD*IQRSSY
Trigger: GTAGGAAGATCTCTGAATCAAGTCTCCGAGTCCAGT...CAGGATGGAGGGTGCTCTCAGTGACGGCAGAGGCGTGAGAACACGGAGCAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CAA 90 bp GCCTCTGCCGTCACTGAGAGCACCCTCCATCCTGTCTCATTTTCCAATGAGAGCTGGTGCTCTGAGACCTaGGCAGAGGCAGCTCCACTT +
Preference number: 5 (lower is better)
Translates to: ASAVTESTLHPVSFSNESWCSET*AEAAPL
Trigger: AAGTGGAGCTGCCTCTGCCAAGGTCTCAGAGCACCA...GCTCTCATTGGAAAATGAGACAGGATGGAGGGTGCTCTCAGTGACGGCAGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS TCA 90 bp TTTGGAAGCTGTTGCTTAGCGTGTTGTAAAGATCCTCCAAAGCCATaGGAAGAGCTGCTGCCGCTGCTGCTGCTGCCGCTGCTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: FGSCCLACCKDPPKP*EELLPLLLLPLLLL
Trigger: CAGCAGCAGCAGCGGCAGCAGCAGCAGCGGCAGCAGCTCTTCTCATGGCTTTGGAGGATCTTTACAACACGCTAAGCAACAGCTTCCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
ENSMUST00000239298.2
CDS GCA 90 bp GCTCCTGTAGTTGCCCTTACCACTGGCATCCCCATAGGGGACATCTaGAGCAATCAGCAGGCCACCCTGCTGTCTACATCTGTTTGGAAC +
Preference number: 5 (lower is better)
Translates to: APVVALTTGIPIGDI*SNQQATLLSTSVWN
Trigger: GTTCCAAACAGATGTAGACAGCAGGGTGGCCTGCTGATTGCTGCAGATGTCCCCTATGGGGATGCCAGTGGTAAGGGCAACTACAGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS TCA 90 bp GCTGCTGCTGCCGCTGCTGCTGCTGCTTTCCTGACAGCATCTGGCTaGCATTTTAATAGGAACATCCTCTGCTTTCTGAGCTGCTGCCTC +
Preference number: 5 (lower is better)
Translates to: AAAAAAAAAFLTASG*HFNRNILCFLSCCL
Trigger: GAGGCAGCAGCTCAGAAAGCAGAGGATGTTCCTATTAAAATGTCAGCCAGATGCTGTCAGGAAAGCAGCAGCAGCAGCGGCAGCAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
ENSMUST00000239298.2
CDS CCA 90 bp GTCCGGCTTTCAAAGTCAGACTCCGGGGAGATGGAACTCCCAATGTaGAAAGTGACCTTTTCGACAGGAGGATCCTCCTGGGAATGCCTG +
Preference number: 5 (lower is better)
Translates to: VRLSKSDSGEMELPM*KVTFSTGGSSWECL
Trigger: CAGGCATTCCCAGGAGGATCCTCCTGTCGAAAAGGTCACTTTCCACATTGGGAGTTCCATCTCCCCGGAGTCTGACTTTGAAAGCCGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS CCA 90 bp AGCAGGCGGATGTCACTCAAGCCAAACTCCGAACACGACCAACTGTaGTTGAGCACTGTGGAATTTGTGTCGCGTCCTCCTCTGGCACAT +
Preference number: 5 (lower is better)
Translates to: SRRMSLKPNSEHDQL*LSTVEFVSRPPLAH
Trigger: ATGTGCCAGAGGAGGACGCGACACAAATTCCACAGTGCTCAACCACAGTTGGTCGTGTTCGGAGTTTGGCTTGAGTGACATCCGCCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239298.2
CDS-3UTR CAA 90 bp GCCTCTGCCGTCACTGAGAGCACCCTCCATCCTGTCTCATTTTCCAATGAGAGCCATTCTGCCCTCTGCTaGGCATATCAACAGGTGTGC +
Preference number: 5 (lower is better)
Translates to: ASAVTESTLHPVSFSNESHSALC*AYQQVC
Trigger: GCACACCTGTTGATATGCCAAGCAGAGGGCAGAATG...GCTCTCATTGGAAAATGAGACAGGATGGAGGGTGCTCTCAGTGACGGCAGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CAA 90 bp CTCGGGGACGTGTCTCCTGACATCTCCGGTCCCAAAGCTCACCAGTGTGCTGGGCTGGTTCAGCTATCCTaGGAACAGAATATAAGTTCC +
Preference number: 5 (lower is better)
Translates to: LGDVSPDISGPKAHQCAGLVQLS*EQNISS
Trigger: GGAACTTATATTCTGTTCCAAGGATAGCTGAACCAG...CCCAGCACACTGGTGAGCTTTGGGACCGGAGATGTCAGGAGACACGTCCCCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
CDS-3UTR CAA 90 bp GCTGGGGCCAGTGGTCTCACTCAGCAGGGTGCTAATCAAAATCTCCCTGCACTTGCTCAGCTGATTCTCTaGCAGTTCAGAGCAACGGAG +
Preference number: 5 (lower is better)
Translates to: AGASGLTQQGANQNLPALAQLIL*QFRATE
Trigger: CTCCGTTGCTCTGAACTGCAAGAGAATCAGCTGAGC...AAGTGCAGGGAGATTTTGATTAGCACCCTGCTGAGTGAGACCACTGGCCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
CDS-3UTR CAA 90 bp GCTGGGGCCAGTGGTCTCACTCAGCAGGGTGCTAATCAAAATCTCCCTGCACTTCACAGCTGGGAGGACTaGAAGAACAATCCTGGGTTG +
Preference number: 5 (lower is better)
Translates to: AGASGLTQQGANQNLPALHSWED*KNNPGL
Trigger: CAACCCAGGATTGTTCTTCAAGTCCTCCCAGCTGTG...AAGTGCAGGGAGATTTTGATTAGCACCCTGCTGAGTGAGACCACTGGCCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
CDS TCA 90 bp GTCCATCCTCCTTCTTACCCTGGGCACCTCACAGCTGGGAGGACTTaGAGAACAATCCTGGGTTGCCTCTTGGTCATTCTGTTTGTCCTC +
Preference number: 5 (lower is better)
Translates to: VHPPSYPGHLTAGRT*RTILGCLLVILFVL
Trigger: GAGGACAAACAGAATGACCAAGAGGCAACCCAGGATTGTTCTTCAAGTCCTCCCAGCTGTGAGGTGCCCAGGGTAAGAAGGAGGATGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS TCA 90 bp TTTCAAAGTCAGACTCCGGGGAGATGGAACTCCCAATGTGGAAAGTaGCCTTTTCGACAGGAGGATCCTCCTGGGAATGCCTGTCTGGGC +
Preference number: 5 (lower is better)
Translates to: FQSQTPGRWNSQCGK*PFRQEDPPGNACLG
Trigger: GCCCAGACAGGCATTCCCAGGAGGATCCTCCTGTCGAAAAGGTCACTTTCCACATTGGGAGTTCCATCTCCCCGGAGTCTGACTTTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS TCA 90 bp GGCGGATGTCACTCAAGCCAAACTCCGAACACGACCAACTGTGGTTaGGCACTGTGGAATTTGTGTCGCGTCCTCCTCTGGCACATTTTG +
Preference number: 5 (lower is better)
Translates to: GGCHSSQTPNTTNCG*ALWNLCRVLLWHIL
Trigger: CAAAATGTGCCAGAGGAGGACGCGACACAAATTCCACAGTGCTCAACCACAGTTGGTCGTGTTCGGAGTTTGGCTTGAGTGACATCCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239298.2
CDS GCA 90 bp TATCCAAGCTCTCGTTCCTGGGAATGTCTCCTTCGCTCCTGTAGTTaGCCTTACCACTGGCATCCCCATAGGGGACATCTGCAGCAATCA +
Preference number: 5 (lower is better)
Translates to: YPSSRSWECLLRSCS*PYHWHPHRGHLQQS
Trigger: TGATTGCTGCAGATGTCCCCTATGGGGATGCCAGTGGTAAGGGCAACTACAGGAGCGAAGGAGACATTCCCAGGAACGAGAGCTTGGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS GCA 90 bp CTCAGTGAAGCTGATCGAGCAATGCCGCTGTCCCTGTCTTCATTCTaGCCTCTGCTTGGCATATCAACAGGTGTGCTGTGTGCTGCAAAG +
Preference number: 5 (lower is better)
Translates to: LSEADRAMPLSLSSF*PLLGISTGVLCAAK
Trigger: CTTTGCAGCACACAGCACACCTGTTGATATGCCAAGCAGAGGGCAGAATGAAGACAGGGACAGCGGCATTGCTCGATCAGCTTCACTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
CDS CCA 90 bp GGGTTTGTTGGTCCATCCTCCTTCTTACCCTGGGCACCTCACAGCTaGGAGGACTTGAAGAACAATCCTGGGTTGCCTCTTGGTCATTCT +
Preference number: 5 (lower is better)
Translates to: GFVGPSSFLPWAPHS*EDLKNNPGLPLGHS
Trigger: AGAATGACCAAGAGGCAACCCAGGATTGTTCTTCAAGTCCTCCCAGCTGTGAGGTGCCCAGGGTAAGAAGGAGGATGGACCAACAAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CAA 90 bp ACTTTCCTTCTGGAATGTTCTAGACATTGGTTACCCACTACTCAGAGTCAGCCCGCGCCGCCGCCCCTTTaGTTGAAGAGCTTCTGGAGC +
Preference number: 5 (lower is better)
Translates to: TFLLECSRHWLPTTQSQPAPPPL*LKSFWS
Trigger: GCTCCAGAAGCTCTTCAACAAAAGGGGCGGCGGCGC...GGGCTGACTCTGAGTAGTGGGTAACCAATGTCTAGAACATTCCAGAAGGAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CAA 90 bp GCCTCTGCCGTCACTGAGAGCACCCTCCATCCTGTCTCATTTTCCAATGAGAGCCGCTCCTCCATTCTTTaGGTCCGGCTTTCAAAGTCA +
Preference number: 5 (lower is better)
Translates to: ASAVTESTLHPVSFSNESRSSIL*VRLSKS
Trigger: TGACTTTGAAAGCCGGACCAAAAGAATGGAGGAGCG...GCTCTCATTGGAAAATGAGACAGGATGGAGGGTGCTCTCAGTGACGGCAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS GCA 90 bp CTCAGTGAAGCTGATCGAGCAATGCCGCTGTCCCTGTCTTCATTCTaGCCTCTGCTTGGCATATCAACAGGTGTGCTGTGTGCTAGGTTA +
Preference number: 5 (lower is better)
Translates to: LSEADRAMPLSLSSF*PLLGISTGVLCARL
Trigger: TAACCTAGCACACAGCACACCTGTTGATATGCCAAGCAGAGGGCAGAATGAAGACAGGGACAGCGGCATTGCTCGATCAGCTTCACTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000239298.2
CDS-3UTR CAA 90 bp GCTTACACTTCCCTCCTGCCAGAAAGGTTACTTTCTTTTGATTCCTGGGAGACACCGCCGCCCCTTTTGTaGAAGAGCTTCTGGAGCAGG +
Preference number: 5 (lower is better)
Translates to: AYTSLLPERLLSFDSWETPPPLL*KSFWSR
Trigger: CCTGCTCCAGAAGCTCTTCAACAAAAGGGGCGGCGG...TGTCTCCCAGGAATCAAAAGAAAGTAACCTTTCTGGCAGGAGGGAAGTGTAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CAA 90 bp TCTCACGCCTCTGCCGTCACTGAGAGCACCCTCCATCCTGTCTCATTTTCCAATGGAGTCAAACATGACTaGTCTGCCTCTCCTCTCACA +
Preference number: 5 (lower is better)
Translates to: SHASAVTESTLHPVSFSNGVKHD*SASPLT
Trigger: TGTGAGAGGAGAGGCAGACAAGTCATGTTTGACTCC...ATTGGAAAATGAGACAGGATGGAGGGTGCTCTCAGTGACGGCAGAGGCGTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CAA 90 bp ACTTTCCTTCTGGAATGTTCTAGACATTGGTTACCCACTACTCAGAGTCAGCCCACAGCATGTGTCATGTaGGCCCGGAGGCCTCTGTCC +
Preference number: 5 (lower is better)
Translates to: TFLLECSRHWLPTTQSQPTACVM*ARRPLS
Trigger: GGACAGAGGCCTCCGGGCCAACATGACACATGCTGT...GGGCTGACTCTGAGTAGTGGGTAACCAATGTCTAGAACATTCCAGAAGGAAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CAA 90 bp CTTACACTTCCCTCCTGCCAGAAAGGTTACTTTCTTTTGATTCCTGGGAGACAAAACCCCTGCAGCAGTTaGCCGCTGCACACCTGCAGC +
Preference number: 5 (lower is better)
Translates to: LTLPSCQKGYFLLIPGRQNPCSS*PLHTCS
Trigger: GCTGCAGGTGTGCAGCGGCAAACTGCTGCAGGGGTT...TTGTCTCCCAGGAATCAAAAGAAAGTAACCTTTCTGGCAGGAGGGAAGTGTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
CDS TCA 90 bp AGAGGCAGCTCCACTTCCAAGGACTCTTCAGTCCTGTCACAACTGTaGCCTAGTTCTAGCAGGGCTAAGACACACGCTTCATCATCACTG +
Preference number: 5 (lower is better)
Translates to: RGSSTSKDSSVLSQL*PSSSRAKTHASSSL
Trigger: CAGTGATGATGAAGCGTGTGTCTTAGCCCTGCTAGAACTAGGTCACAGTTGTGACAGGACTGAAGAGTCCTTGGAAGTGGAGCTGCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS CCA 90 bp TTCTGCCTCTTGGAAGCCCATACTACTGGCCTCGGAATTCTGCTCTaGCCTCTTGCATCTGTTCTTTTCAGGTTTGTGACCCAGTTCGCT +
Preference number: 5 (lower is better)
Translates to: FCLLEAHTTGLGILL*PLASVLFRFVTQFA
Trigger: AGCGAACTGGGTCACAAACCTGAAAAGAACAGATGCAAGAGGCCAGAGCAGAATTCCGAGGCCAGTAGTATGGGCTTCCAAGAGGCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
ENSMUST00000239298.2
CDS CCA 90 bp GTATCCACGAACTGTCAGGTTCTGCCTCTTGGAAGCCCATACTACTaGCCTCGGAATTCTGCTCTGGCCTCTTGCATCTGTTCTTTTCAG +
Preference number: 5 (lower is better)
Translates to: VSTNCQVLPLGSPYY*PRNSALASCICSFQ
Trigger: CTGAAAAGAACAGATGCAAGAGGCCAGAGCAGAATTCCGAGGCCAGTAGTATGGGCTTCCAAGAGGCAGAACCTGACAGTTCGTGGATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
ENSMUST00000239298.2
CDS CCA 90 bp CTTACCCTGGGCACCTCACAGCTGGGAGGACTTGAAGAACAATCCTaGGTTGCCTCTTGGTCATTCTGTTTGTCCTCACAGAATATGCCT +
Preference number: 5 (lower is better)
Translates to: LTLGTSQLGGLEEQS*VASWSFCLSSQNMP
Trigger: AGGCATATTCTGTGAGGACAAACAGAATGACCAAGAGGCAACCCAGGATTGTTCTTCAAGTCCTCCCAGCTGTGAGGTGCCCAGGGTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS CCA 90 bp CTTCATCATCACTGTCTCCAAGAGCACTATCCAAGCTCTCGTTCCTaGGAATGTCTCCTTCGCTCCTGTAGTTGCCCTTACCACTGGCAT +
Preference number: 5 (lower is better)
Translates to: LHHHCLQEHYPSSRS*ECLLRSCSCPYHWH
Trigger: ATGCCAGTGGTAAGGGCAACTACAGGAGCGAAGGAGACATTCCCAGGAACGAGAGCTTGGATAGTGCTCTTGGAGACAGTGATGATGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS CCA 90 bp CAGGGAGGTGAAGCTTATAGAGCTGTAAGATGGACTGAAGTAAACTaGACACCTGACTGGAGACCAAGACATCCTGGCCCAGCTTCATGG +
Preference number: 5 (lower is better)
Translates to: QGGEAYRAVRWTEVN*TPDWRPRHPGPASW
Trigger: CCATGAAGCTGGGCCAGGATGTCTTGGTCTCCAGTCAGGTGTCCAGTTTACTTCAGTCCATCTTACAGCTCTATAAGCTTCACCTCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CAA 90 bp CTTACACTTCCCTCCTGCCAGAAAGGTTACTTTCTTTTGATTCCTGGGAGACAACCGCCGCCCCTTTTGTaGAAGAGCTTCTGGAGCAGG +
Preference number: 5 (lower is better)
Translates to: LTLPSCQKGYFLLIPGRQPPPLL*KSFWSR
Trigger: CCTGCTCCAGAAGCTCTTCAACAAAAGGGGCGGCGG...TTGTCTCCCAGGAATCAAAAGAAAGTAACCTTTCTGGCAGGAGGGAAGTGTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CAA 90 bp CAGGAAACACTTTCCTTCTGGAATGTTCTAGACATTGGTTACCCACTACTCAGAGCGCCGCCGCCCCTTTaGTTGAAGAGCTTCTGGAGC +
Preference number: 5 (lower is better)
Translates to: QETLSFWNVLDIGYPLLRAPPPL*LKSFWS
Trigger: GCTCCAGAAGCTCTTCAACAAAAGGGGCGGCGGCGC...TCTGAGTAGTGGGTAACCAATGTCTAGAACATTCCAGAAGGAAAGTGTTTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CAA 90 bp ACTACTCAGAGTCAGCCCTCAGTATTCTACCCAACAGCATGGGCACGTCTGTCTCATTTTCCAAACTCGTaGTCTGACTTCGGAGCCAGC +
Preference number: 5 (lower is better)
Translates to: TTQSQPSVFYPTAWARLSHFPNS*SDFGAS
Trigger: GCTGGCTCCGAAGTCAGACAACGAGTTTGGAAAATG...AGACAGACGTGCCCATGCTGTTGGGTAGAATACTGAGGGCTGACTCTGAGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CAA 90 bp TCTCACGCCTCTGCCGTCACTGAGAGCACCCTCCATCCTGTCTCATTTTCCAATTTCTGCTCTGGCCTCTaGCATCTGTTCTTTTCAGGT +
Preference number: 5 (lower is better)
Translates to: SHASAVTESTLHPVSFSNFCSGL*HLFFSG
Trigger: ACCTGAAAAGAACAGATGCAAGAGGCCAGAGCAGAA...ATTGGAAAATGAGACAGGATGGAGGGTGCTCTCAGTGACGGCAGAGGCGTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CAA 90 bp CACCTTTTCGGACTCTTCGGCTATGACAGAATGACAGCATCCGCGTCAGCACAGTTCTGCTCTGGCCTCTaGCATCTGTTCTTTTCAGGT +
Preference number: 5 (lower is better)
Translates to: HLFGLFGYDRMTASASAQFCSGL*HLFFSG
Trigger: ACCTGAAAAGAACAGATGCAAGAGGCCAGAGCAGAA...CTGTGCTGACGCGGATGCTGTCATTCTGTCATAGCCGAAGAGTCCGAAAAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
CDS-3UTR CAA 90 bp GACATTGGTTACCCACTACTCAGAGTCAGCCCTCAGTATTCTACCCAACAGCATGTCAGGTTCTGCCTCTaGGAAGCCCATACTACTGGC +
Preference number: 5 (lower is better)
Translates to: DIGYPLLRVSPQYSTQQHVRFCL*EAHTTG
Trigger: GCCAGTAGTATGGGCTTCCAAGAGGCAGAACCTGAC...ATGCTGTTGGGTAGAATACTGAGGGCTGACTCTGAGTAGTGGGTAACCAATGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CAA 90 bp CGTCTGTCTAGTTTGACAGTGTTGCTTACACTTCCCTCCTGCCAGAAAGGTTACGTCAGGTTCTGCCTCTaGGAAGCCCATACTACTGGC +
Preference number: 5 (lower is better)
Translates to: RLSSLTVLLTLPSCQKGYVRFCL*EAHTTG
Trigger: GCCAGTAGTATGGGCTTCCAAGAGGCAGAACCTGAC...GTAACCTTTCTGGCAGGAGGGAAGTGTAAGCAACACTGTCAAACTAGACAGACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CAA 90 bp GCTTACACTTCCCTCCTGCCAGAAAGGTTACTTTCTTTTGATTCCTGGGAGACAAGAGCCCTGCTGCTCTaGAGTCAGCCCAGTGTCCAT +
Preference number: 5 (lower is better)
Translates to: AYTSLLPERLLSFDSWETRALLL*SQPSVH
Trigger: ATGGACACTGGGCTGACTCAAGAGCAGCAGGGCTCT...TGTCTCCCAGGAATCAAAAGAAAGTAACCTTTCTGGCAGGAGGGAAGTGTAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CAA 90 bp ACTACTCAGAGTCAGCCCTCAGTATTCTACCCAACAGCATGGGCACGTCTGTCTTTTTCAAAGTCAGCTTaGAAGGAGCACCCAGAGCCC +
Preference number: 5 (lower is better)
Translates to: TTQSQPSVFYPTAWARLSFSKSA*KEHPEP
Trigger: GGGCTCTGGGTGCTCCTTCAAAGCTGACTTTGAAAA...AGACAGACGTGCCCATGCTGTTGGGTAGAATACTGAGGGCTGACTCTGAGTAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CAA 90 bp ACTTTCCTTCTGGAATGTTCTAGACATTGGTTACCCACTACTCAGAGTCAGCCCTGGTGCTCTGAGACCTaGGCAGAGGCAGCTCCACTT +
Preference number: 5 (lower is better)
Translates to: TFLLECSRHWLPTTQSQPWCSET*AEAAPL
Trigger: AAGTGGAGCTGCCTCTGCCAAGGTCTCAGAGCACCA...GGGCTGACTCTGAGTAGTGGGTAACCAATGTCTAGAACATTCCAGAAGGAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CAA 90 bp ACCCACTACTCAGAGTCAGCCCTCAGTATTCTACCCAACAGCATGGGCACGTCTACCTGGACAGTCCACTaGTCAGTGTCTGCAATGATA +
Preference number: 5 (lower is better)
Translates to: THYSESALSILPNSMGTSTWTVH*SVSAMI
Trigger: TATCATTGCAGACACTGACAAGTGGACTGTCCAGGT...AGACGTGCCCATGCTGTTGGGTAGAATACTGAGGGCTGACTCTGAGTAGTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CAA 90 bp CGTCTGTCTAGTTTGACAGTGTTGCTTACACTTCCCTCCTGCCAGAAAGGTTACCATTCTGCCCTCTGCTaGGCATATCAACAGGTGTGC +
Preference number: 5 (lower is better)
Translates to: RLSSLTVLLTLPSCQKGYHSALC*AYQQVC
Trigger: GCACACCTGTTGATATGCCAAGCAGAGGGCAGAATG...GTAACCTTTCTGGCAGGAGGGAAGTGTAAGCAACACTGTCAAACTAGACAGACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CAA 90 bp GCCTCTGCCGTCACTGAGAGCACCCTCCATCCTGTCTCATTTTCCAATGAGAGCTTATATGGATGTGTTTaGGCCAGCATGTTCACTGAC +
Preference number: 5 (lower is better)
Translates to: ASAVTESTLHPVSFSNESLYGCV*ASMFTD
Trigger: GTCAGTGAACATGCTGGCCAAAACACATCCATATAA...GCTCTCATTGGAAAATGAGACAGGATGGAGGGTGCTCTCAGTGACGGCAGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CAA 90 bp GACATTGGTTACCCACTACTCAGAGTCAGCCCTCAGTATTCTACCCAACAGCATGCTCAGCTGATTCTCTaGCAGTTCAGAGCAACGGAG +
Preference number: 5 (lower is better)
Translates to: DIGYPLLRVSPQYSTQQHAQLIL*QFRATE
Trigger: CTCCGTTGCTCTGAACTGCAAGAGAATCAGCTGAGC...ATGCTGTTGGGTAGAATACTGAGGGCTGACTCTGAGTAGTGGGTAACCAATGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CAA 90 bp ACCCACTACTCAGAGTCAGCCCTCAGTATTCTACCCAACAGCATGGGCACGTCTAGGGCGGTTATTATCTaGCTCCCATTTATAACCTGG +
Preference number: 5 (lower is better)
Translates to: THYSESALSILPNSMGTSRAVII*LPFITW
Trigger: CCAGGTTATAAATGGGAGCAAGATAATAACCGCCCT...AGACGTGCCCATGCTGTTGGGTAGAATACTGAGGGCTGACTCTGAGTAGTGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CAA 90 bp CAGGAAACACTTTCCTTCTGGAATGTTCTAGACATTGGTTACCCACTACTCAGATCCCCTGTGGTAGGATaGGTGGTACCAGGGCAGGCT +
Preference number: 5 (lower is better)
Translates to: QETLSFWNVLDIGYPLLRSPVVG*VVPGQA
Trigger: AGCCTGCCCTGGTACCACCAATCCTACCACAGGGGA...TCTGAGTAGTGGGTAACCAATGTCTAGAACATTCCAGAAGGAAAGTGTTTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS TCA 90 bp CAGTGCTTCCATCAGACGGCTCACATAGAACTGGACTCGGAGACTTaGTTCAGAGATCTTCCTACAGGAGATCATGGCCTTTTCGATTGC +
Preference number: 5 (lower is better)
Translates to: QCFHQTAHIELDSET*FRDLPTGDHGLFDC
Trigger: GCAATCGAAAAGGCCATGATCTCCTGTAGGAAGATCTCTGAATCAAGTCTCCGAGTCCAGTTCTATGTGAGCCGTCTGATGGAAGCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
ENSMUST00000239298.2
CDS GCA 90 bp AATCCTGGGTTGCCTCTTGGTCATTCTGTTTGTCCTCACAGAATATaGCTTGAGGTATCCACGAACTGTCAGGTTCTGCCTCTTGGAAGC +
Preference number: 5 (lower is better)
Translates to: NPGLPLGHSVCPHRI*LEVSTNCQVLPLGS
Trigger: GCTTCCAAGAGGCAGAACCTGACAGTTCGTGGATACCTCAAGGCATATTCTGTGAGGACAAACAGAATGACCAAGAGGCAACCCAGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CAA 90 bp CGTCTGTCTAGTTTGACAGTGTTGCTTACACTTCCCTCCTGCCAGAAAGGTTACTCATGGCCTTTTCGATaGCACCCTTCAGCCTGTTCA +
Preference number: 5 (lower is better)
Translates to: RLSSLTVLLTLPSCQKGYSWPFR*HPSACS
Trigger: TGAACAGGCTGAAGGGTGCAATCGAAAAGGCCATGA...GTAACCTTTCTGGCAGGAGGGAAGTGTAAGCAACACTGTCAAACTAGACAGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CAA 90 bp GCCGTCACTGAGAGCACCCTCCATCCTGTCTCATTTTCCAATGAGAGCTGTCCTTCTTGGTCATTCTGTTaGTCCTCACAGAATATGCCT +
Preference number: 5 (lower is better)
Translates to: AVTESTLHPVSFSNESCPSWSFC*SSQNMP
Trigger: AGGCATATTCTGTGAGGACAAACAGAATGACCAAGA...AGGACAGCTCTCATTGGAAAATGAGACAGGATGGAGGGTGCTCTCAGTGACGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS TCA 90 bp TCGGAATTCTGCTCTGGCCTCTTGCATCTGTTCTTTTCAGGTTTGTaGCCCAGTTCGCTAGTATTAACGCCTTCCGAGATCTCAGCTACT +
Preference number: 5 (lower is better)
Translates to: SEFCSGLLHLFFSGL*PSSLVLTPSEISAT
Trigger: AGTAGCTGAGATCTCGGAAGGCGTTAATACTAGCGAACTGGGTCACAAACCTGAAAAGAACAGATGCAAGAGGCCAGAGCAGAATTCCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
ENSMUST00000239298.2
CDS TCA 90 bp GTCCTCCTCTGGCACATTTTGGAATCTTTGCACATACAAGTGTCTTaGAAATCCTCCCAGCACCACAAGTGGTATCGGTCAGACATCTGG +
Preference number: 5 (lower is better)
Translates to: VLLWHILESLHIQVS*KSSQHHKWYRSDIW
Trigger: CCAGATGTCTGACCGATACCACTTGTGGTGCTGGGAGGATTTTCAAGACACTTGTATGTGCAAAGATTCCAAAATGTGCCAGAGGAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239298.2
CDS-3UTR CAA 90 bp GTTCTAGACATTGGTTACCCACTACTCAGAGTCAGCCCTCAGTATTCTACCCAAGGAGTCAAACATGACTaGTCTGCCTCTCCTCTCACA +
Preference number: 5 (lower is better)
Translates to: VLDIGYPLLRVSPQYSTQGVKHD*SASPLT
Trigger: TGTGAGAGGAGAGGCAGACAAGTCATGTTTGACTCC...TTGGGTAGAATACTGAGGGCTGACTCTGAGTAGTGGGTAACCAATGTCTAGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CAA 90 bp ACTACTCAGAGTCAGCCCTCAGTATTCTACCCAACAGCATGGGCACGTCTGTCTCTGGTTCAGCTATCCTaGGAACAGAATATAAGTTCC +
Preference number: 5 (lower is better)
Translates to: TTQSQPSVFYPTAWARLSLVQLS*EQNISS
Trigger: GGAACTTATATTCTGTTCCAAGGATAGCTGAACCAG...AGACAGACGTGCCCATGCTGTTGGGTAGAATACTGAGGGCTGACTCTGAGTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CAA 90 bp GCTTACACTTCCCTCCTGCCAGAAAGGTTACTTTCTTTTGATTCCTGGGAGACAGCTGTCTACATCTGTTaGGAACAGGCTCCGATGAAG +
Preference number: 5 (lower is better)
Translates to: AYTSLLPERLLSFDSWETAVYIC*EQAPMK
Trigger: CTTCATCGGAGCCTGTTCCAAACAGATGTAGACAGC...TGTCTCCCAGGAATCAAAAGAAAGTAACCTTTCTGGCAGGAGGGAAGTGTAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CAA 90 bp CGTCTGTCTAGTTTGACAGTGTTGCTTACACTTCCCTCCTGCCAGAAAGGTTACACCTGGACAGTCCACTaGTCAGTGTCTGCAATGATA +
Preference number: 5 (lower is better)
Translates to: RLSSLTVLLTLPSCQKGYTWTVH*SVSAMI
Trigger: TATCATTGCAGACACTGACAAGTGGACTGTCCAGGT...GTAACCTTTCTGGCAGGAGGGAAGTGTAAGCAACACTGTCAAACTAGACAGACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS CCA 90 bp ATCATCTCCCCAAGCATGCTGACATCAGATGCTGGTCTCGTGTATTaGTACTTTGGAAGCTGTTGCTTAGCGTGTTGTAAAGATCCTCCA +
Preference number: 5 (lower is better)
Translates to: IISPSMLTSDAGLVY*YFGSCCLACCKDPP
Trigger: TGGAGGATCTTTACAACACGCTAAGCAACAGCTTCCAAAGTACCAATACACGAGACCAGCATCTGATGTCAGCATGCTTGGGGAGATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
ENSMUST00000239298.2
CDS-3UTR CAA 90 bp TACCCACTACTCAGAGTCAGCCCTCAGTATTCTACCCAACAGCATGGGCACGTCTTTACTAATCATCAGTaGTGGAGGAGATCGTATGTA +
Preference number: 5 (lower is better)
Translates to: YPLLRVSPQYSTQQHGHVFTNHQ*WRRSYV
Trigger: TACATACGATCTCCTCCACAACTGATGATTAGTAAA...GACGTGCCCATGCTGTTGGGTAGAATACTGAGGGCTGACTCTGAGTAGTGGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CAA 90 bp CAGGAAACACTTTCCTTCTGGAATGTTCTAGACATTGGTTACCCACTACTCAGACACAGCTGGGAGGACTaGAAGAACAATCCTGGGTTG +
Preference number: 5 (lower is better)
Translates to: QETLSFWNVLDIGYPLLRHSWED*KNNPGL
Trigger: CAACCCAGGATTGTTCTTCAAGTCCTCCCAGCTGTG...TCTGAGTAGTGGGTAACCAATGTCTAGAACATTCCAGAAGGAAAGTGTTTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CAA 90 bp GACATTGGTTACCCACTACTCAGAGTCAGCCCTCAGTATTCTACCCAACAGCATTGTCCTGCAGATTATTaGTACTTCCACAGAAGCTAC +
Preference number: 5 (lower is better)
Translates to: DIGYPLLRVSPQYSTQQHCPADY*YFHRSY
Trigger: GTAGCTTCTGTGGAAGTACAAATAATCTGCAGGACA...ATGCTGTTGGGTAGAATACTGAGGGCTGACTCTGAGTAGTGGGTAACCAATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CAA 90 bp GAAACACTTTCCTTCTGGAATGTTCTAGACATTGGTTACCCACTACTCAGAGTCTCATGGCCTTTTCGATaGCACCCTTCAGCCTGTTCA +
Preference number: 5 (lower is better)
Translates to: ETLSFWNVLDIGYPLLRVSWPFR*HPSACS
Trigger: TGAACAGGCTGAAGGGTGCAATCGAAAAGGCCATGA...GACTCTGAGTAGTGGGTAACCAATGTCTAGAACATTCCAGAAGGAAAGTGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CAA 90 bp CTAGACATTGGTTACCCACTACTCAGAGTCAGCCCTCAGTATTCTACCCAACAGAGAAGTATAAATTCCTaGAGAAAGCGCTGGCAGAGT +
Preference number: 5 (lower is better)
Translates to: LDIGYPLLRVSPQYSTQQRSINS*RKRWQS
Trigger: ACTCTGCCAGCGCTTTCTCAAGGAATTTATACTTCT...CTGTTGGGTAGAATACTGAGGGCTGACTCTGAGTAGTGGGTAACCAATGTCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CAA 90 bp TATGACAGAATGACAGCATCCGCGTCAGCACAGGTCCATGAGATGCTTTGTTTAAGAAGTATAAATTCCTaGAGAAAGCGCTGGCAGAGT +
Preference number: 5 (lower is better)
Translates to: YDRMTASASAQVHEMLCLRSINS*RKRWQS
Trigger: ACTCTGCCAGCGCTTTCTCAAGGAATTTATACTTCT...TAAACAAAGCATCTCATGGACCTGTGCTGACGCGGATGCTGTCATTCTGTCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
CDS-3UTR CAA 90 bp GTTCTAGACATTGGTTACCCACTACTCAGAGTCAGCCCTCAGTATTCTACCCAATTATATGGATGTGTTTaGGCCAGCATGTTCACTGAC +
Preference number: 5 (lower is better)
Translates to: VLDIGYPLLRVSPQYSTQLYGCV*ASMFTD
Trigger: GTCAGTGAACATGCTGGCCAAAACACATCCATATAA...TTGGGTAGAATACTGAGGGCTGACTCTGAGTAGTGGGTAACCAATGTCTAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CAA 90 bp GTAATGAGGAGACAGACATGTCACATGGATCAGGATTTGCTGTCCCACATTCTCTCTTGGTCATTCTGTTaGTCCTCACAGAATATGCCT +
Preference number: 5 (lower is better)
Translates to: VMRRQTCHMDQDLLSHILSWSFC*SSQNMP
Trigger: AGGCATATTCTGTGAGGACAAACAGAATGACCAAGA...GAGAATGTGGGACAGCAAATCCTGATCCATGTGACATGTCTGTCTCCTCATTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
CDS-3UTR CAA 90 bp TCAGTTGGGTTTTTACAGTTCGTCACTTTGGTAAGTTTTACAAATGGTCAAGTTAGAGCCCTGCTGCTCTaGAGTCAGCCCAGTGTCCAT +
Preference number: 5 (lower is better)
Translates to: SVGFLQFVTLVSFTNGQVRALLL*SQPSVH
Trigger: ATGGACACTGGGCTGACTCAAGAGCAGCAGGGCTCT...AACTTGACCATTTGTAAAACTTACCAAAGTGACGAACTGTAAAAACCCAACTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
CDS-3UTR CAA 90 bp GAACAGGAAACACTTTCCTTCTGGAATGTTCTAGACATTGGTTACCCACTACTCAGGGCGGTTATTATCTaGCTCCCATTTATAACCTGG +
Preference number: 5 (lower is better)
Translates to: EQETLSFWNVLDIGYPLLRAVII*LPFITW
Trigger: CCAGGTTATAAATGGGAGCAAGATAATAACCGCCCT...GAGTAGTGGGTAACCAATGTCTAGAACATTCCAGAAGGAAAGTGTTTCCTGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CAA 90 bp AAAGGTTACTTTCTTTTGATTCCTGGGAGACAATGTCGACTGTTCCTGAACAATTTTTCAAAGTCAGCTTaGAAGGAGCACCCAGAGCCC +
Preference number: 5 (lower is better)
Translates to: KGYFLLIPGRQCRLFLNNFSKSA*KEHPEP
Trigger: GGGCTCTGGGTGCTCCTTCAAAGCTGACTTTGAAAA...ATTGTTCAGGAACAGTCGACATTGTCTCCCAGGAATCAAAAGAAAGTAACCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS-3UTR CAA 90 bp TCAGTTGGGTTTTTACAGTTCGTCACTTTGGTAAGTTTTACAAATGGTCAAGTTGCTGTCTACATCTGTTaGGAACAGGCTCCGATGAAG +
Preference number: 5 (lower is better)
Translates to: SVGFLQFVTLVSFTNGQVAVYIC*EQAPMK
Trigger: CTTCATCGGAGCCTGTTCCAAACAGATGTAGACAGC...AACTTGACCATTTGTAAAACTTACCAAAGTGACGAACTGTAAAAACCCAACTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
CDS-3UTR CAA 90 bp CAGGAAACACTTTCCTTCTGGAATGTTCTAGACATTGGTTACCCACTACTCAGATTTACTAATCATCAGTaGTGGAGGAGATCGTATGTA +
Preference number: 5 (lower is better)
Translates to: QETLSFWNVLDIGYPLLRFTNHQ*WRRSYV
Trigger: TACATACGATCTCCTCCACAACTGATGATTAGTAAA...TCTGAGTAGTGGGTAACCAATGTCTAGAACATTCCAGAAGGAAAGTGTTTCCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS CAA 72 bp AACTCCGAACACGACCAACTGAAGGCCGGCTCCTCCTaGGGCGGCCGGGCCTGGGCAGACGCTGCGCCGCCG +
Preference number: 6 (lower is better)
Translates to: NSEHDQLKAGSS*GGRAWADAAPP
Trigger: CGGCGGCGCAGCGTCTGCCCAGGCCCGGCCGCCCAAGGAGGAGCCGGCCTTCAGTTGGTCGTGTTCGGAGTT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS GCA 72 bp CGGCTCCTCCTTGGGCGGCCGGGCCTGGGCAGACGCTaGGCCGCCGCCCCTTTTGTTGAAGAGCTTCTGGAG +
Preference number: 6 (lower is better)
Translates to: RLLLGRPGLGRR*AAAPFVEELLE
Trigger: CTCCAGAAGCTCTTCAACAAAAGGGGCGGCGGCGCAGCGTCTGCCCAGGCCCGGCCGCCCAAGGAGGAGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS TCA 72 bp GGATGTCACTCAAGCCAAACTCCGAACACGACCAACTaGAGGCCGGCTCCTCCTTGGGCGGCCGGGCCTGGG +
Preference number: 6 (lower is better)
Translates to: GCHSSQTPNTTN*RPAPPWAAGPG
Trigger: CCCAGGCCCGGCCGCCCAAGGAGGAGCCGGCCTTCAGTTGGTCGTGTTCGGAGTTTGGCTTGAGTGACATCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS GCA 72 bp CGGGTGAGCCGGAGAGGTCCTCCTTCAGACAACCCCTaGAGCAGTTTGCCGCTGCACACCTGCAGCAGACCT +
Preference number: 6 (lower is better)
Translates to: RVSRRGPPSDNP*SSLPLHTCSRP
Trigger: AGGTCTGCTGCAGGTGTGCAGCGGCAAACTGCTGCAGGGGTTGTCTGAAGGAGGACCTCTCCGGCTCACCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
CDS GCA 72 bp GAGAAGAGCTGCTGCCGCTGCTGCTGCTGCCGCTGCTaGTGCTGCTTTCCTGACAGCATCTGGCTGACATTT +
Preference number: 6 (lower is better)
Translates to: EKSCCRCCCCRC*CCFPDSIWLTF
Trigger: AAATGTCAGCCAGATGCTGTCAGGAAAGCAGCAGCAGCAGCGGCAGCAGCAGCAGCGGCAGCAGCTCTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
ENSMUST00000239298.2
CDS GCA 72 bp CGTGTTGTAAAGATCCTCCAAAGCCATGAGAAGAGCTaGTGCCGCTGCTGCTGCTGCCGCTGCTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: RVVKILQSHEKS*CRCCCCRCCCC
Trigger: GCAGCAGCAGCAGCGGCAGCAGCAGCAGCGGCAGCAGCTCTTCTCATGGCTTTGGAGGATCTTTACAACACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
ENSMUST00000239298.2
CDS GCA 72 bp ACAGCTTCGGCTATGGGCTCATCGAGTACTGGATGGTaGACCGTGTGGACCAGATCAGCTGCCAGGCACTGC +
Preference number: 6 (lower is better)
Translates to: TASAMGSSSTGW*TVWTRSAARHC
Trigger: GCAGTGCCTGGCAGCTGATCTGGTCCACACGGTGCACCATCCAGTACTCGATGAGCCCATAGCCGAAGCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS CAA 90 bp CCCACTTTCTGCGGCACAAAGGGAATGTGCAAGGGGGCCATCAACTaGGCTAAGTTGTCCCACAGCATGTGTCATGTTGGCCCGGAGGCC +
Preference number: 6 (lower is better)
Translates to: PTFCGTKGMCKGAIN*AKLSHSMCHVGPEA
Trigger: GGCCTCCGGGCCAACATGACACATGCTGTGGGACAACTTAGCCAAGTTGATGGCCCCCTTGCACATTCCCTTTGTGCCGCAGAAAGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS TCA 72 bp TCAGCTTTGAAGGAGCACCCAGAGCCCTGCTGCTCTTaGGTCAGCCCAGTGTCCATGCTAGAGCTGGCAGAG +
Preference number: 6 (lower is better)
Translates to: SALKEHPEPCCS*VSPVSMLELAE
Trigger: CTCTGCCAGCTCTAGCATGGACACTGGGCTGACTCAAGAGCAGCAGGGCTCTGGGTGCTCCTTCAAAGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS GCA 72 bp GCGGACTGCTCTGCTCGCTTCTTTAGCGTCTCCCCATaGAGCTTCGAGTGGAGGGTTTGTTGGTCCATCCTC +
Preference number: 6 (lower is better)
Translates to: ADCSARFFSVSP*SFEWRVCWSIL
Trigger: GAGGATGGACCAACAAACCCTCCACTCGAAGCTGCATGGGGAGACGCTAAAGAAGCGAGCAGAGCAGTCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS GCA 72 bp GAGTACTGGATGGTGCACCGTGTGGACCAGATCAGCTaGCAGGCACTGCTTCAGCTTCTCATCGCTGCTGGT +
Preference number: 6 (lower is better)
Translates to: EYWMVHRVDQIS*QALLQLLIAAG
Trigger: ACCAGCAGCGATGAGAAGCTGAAGCAGTGCCTGGCAGCTGATCTGGTCCACACGGTGCACCATCCAGTACTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS GCA 72 bp GGAGAGGTCCTCCTTCAGACAACCCCTGCAGCAGTTTaGCGCTGCACACCTGCAGCAGACCTAGGTTACTTC +
Preference number: 6 (lower is better)
Translates to: GEVLLQTTPAAV*RCTPAADLGYF
Trigger: GAAGTAACCTAGGTCTGCTGCAGGTGTGCAGCGGCAAACTGCTGCAGGGGTTGTCTGAAGGAGGACCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
CDS CCA 72 bp CCAGCTTCATGGTGTCCGTCACCTTCCGCTGACTCGTaGCCACCTGGACAGTCCACTTGTCAGTGTCTGCAA +
Preference number: 6 (lower is better)
Translates to: PASWCPSPSADS*PPGQSTCQCLQ
Trigger: TTGCAGACACTGACAAGTGGACTGTCCAGGTGGCCACGAGTCAGCGGAAGGTGACGGACACCATGAAGCTGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS CCA 72 bp GAGTGCTGGCGATGGCCGTCAGCAGAGGCAGGTCATTaGATTCGATCCCCAGCACCACACTCAGCTCTTTCA +
Preference number: 6 (lower is better)
Translates to: ECWRWPSAEAGH*IRSPAPHSALS
Trigger: TGAAAGAGCTGAGTGTGGTGCTGGGGATCGAATCCAATGACCTGCCTCTGCTGACGGCCATCGCCAGCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS CAA 72 bp GTCAGCTTTGAAGGAGCACCCAGAGCCCTGCTGCTCTaGAGTCAGCCCAGTGTCCATGCTAGAGCTGGCAGA +
Preference number: 6 (lower is better)
Translates to: VSFEGAPRALLL*SQPSVHARAGR
Trigger: TCTGCCAGCTCTAGCATGGACACTGGGCTGACTCAAGAGCAGCAGGGCTCTGGGTGCTCCTTCAAAGCTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS TCA 72 bp CCCAGCACCACAAGTGGTATCGGTCAGACATCTGGCTaGCTCCTGTTGGCCTACTGGCCAGTTTGTGCTGTC +
Preference number: 6 (lower is better)
Translates to: PSTTSGIGQTSG*LLLAYWPVCAV
Trigger: GACAGCACAAACTGGCCAGTAGGCCAACAGGAGTCAGCCAGATGTCTGACCGATACCACTTGTGGTGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239298.2
CDS GCA 72 bp GTTGCCCTTACCACTGGCATCCCCATAGGGGACATCTaGAGCAATCAGCAGGCCACCCTGCTGTCTACATCT +
Preference number: 6 (lower is better)
Translates to: VALTTGIPIGDI*SNQQATLLSTS
Trigger: AGATGTAGACAGCAGGGTGGCCTGCTGATTGCTGCAGATGTCCCCTATGGGGATGCCAGTGGTAAGGGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS GCA 72 bp GTCCTCCTTCAGACAACCCCTGCAGCAGTTTGCCGCTaGACACCTGCAGCAGACCTAGGTTACTTCCAGTAC +
Preference number: 6 (lower is better)
Translates to: VLLQTTPAAVCR*TPAADLGYFQY
Trigger: GTACTGGAAGTAACCTAGGTCTGCTGCAGGTGTGCAGCGGCAAACTGCTGCAGGGGTTGTCTGAAGGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
CDS CAA 72 bp AAGGGAATGTGCAAGGGGGCCATCAACTTGGCTAAGTaGTCCCACAGCATGTGTCATGTTGGCCCGGAGGCC +
Preference number: 6 (lower is better)
Translates to: KGMCKGAINLAK*SHSMCHVGPEA
Trigger: GGCCTCCGGGCCAACATGACACATGCTGTGGGACAACTTAGCCAAGTTGATGGCCCCCTTGCACATTCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS CAA 90 bp CTTTTCAAAGTCAGCTTTGAAGGAGCACCCAGAGCCCTGCTGCTCTaGAGTCAGCCCAGTGTCCATGCTAGAGCTGGCAGAGGCACTAGC +
Preference number: 6 (lower is better)
Translates to: LFKVSFEGAPRALLL*SQPSVHARAGRGTS
Trigger: GCTAGTGCCTCTGCCAGCTCTAGCATGGACACTGGGCTGACTCAAGAGCAGCAGGGCTCTGGGTGCTCCTTCAAAGCTGACTTTGAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS GCA 72 bp ATCTCTAGTCTGTTCCAGCAGTCTCCGCCCACTTTCTaGGGCACAAAGGGAATGTGCAAGGGGGCCATCAAC +
Preference number: 6 (lower is better)
Translates to: ISSLFQQSPPTF*GTKGMCKGAIN
Trigger: GTTGATGGCCCCCTTGCACATTCCCTTTGTGCCGCAGAAAGTGGGCGGAGACTGCTGGAACAGACTAGAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS GCA 72 bp TCTCGTTCCTGGGAATGTCTCCTTCGCTCCTGTAGTTaGCCTTACCACTGGCATCCCCATAGGGGACATCTG +
Preference number: 6 (lower is better)
Translates to: SRSWECLLRSCS*PYHWHPHRGHL
Trigger: CAGATGTCCCCTATGGGGATGCCAGTGGTAAGGGCAACTACAGGAGCGAAGGAGACATTCCCAGGAACGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS CCA 72 bp GCGCTGGTAACTGCTGGAAGAGGATGTAGAAGAGCTTaGAGACGGGAAGGGCGTGATCAAAAGGCTGCTCAG +
Preference number: 6 (lower is better)
Translates to: ALVTAGRGCRRA*RREGRDQKAAQ
Trigger: CTGAGCAGCCTTTTGATCACGCCCTTCCCGTCTCCAAGCTCTTCTACATCCTCTTCCAGCAGTTACCAGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
ENSMUST00000239298.2
CDS CCA 72 bp GATTCAAACAGGGGGAAGTGGGAGAAAAAGAAGTCCTaGAAATCCCGCTGGGCGGCCTCTCTCTCACACAGG +
Preference number: 6 (lower is better)
Translates to: DSNRGKWEKKKS*KSRWAASLSHR
Trigger: CCTGTGTGAGAGAGAGGCCGCCCAGCGGGATTTCCAGGACTTCTTTTTCTCCCACTTCCCCCTGTTTGAATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
ENSMUST00000239298.2
CDS CCA 72 bp GGTCCATCCTCCTTCTTACCCTGGGCACCTCACAGCTaGGAGGACTTGAAGAACAATCCTGGGTTGCCTCTT +
Preference number: 6 (lower is better)
Translates to: GPSSFLPWAPHS*EDLKNNPGLPL
Trigger: AAGAGGCAACCCAGGATTGTTCTTCAAGTCCTCCCAGCTGTGAGGTGCCCAGGGTAAGAAGGAGGATGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS CCA 72 bp GCGGCACAAAGGGAATGTGCAAGGGGGCCATCAACTTaGCTAAGTTGTCCCACAGCATGTGTCATGTTGGCC +
Preference number: 6 (lower is better)
Translates to: AAQRECARGPST*LSCPTACVMLA
Trigger: GGCCAACATGACACATGCTGTGGGACAACTTAGCCAAGTTGATGGCCCCCTTGCACATTCCCTTTGTGCCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS TCA 72 bp CACTCAAGCCAAACTCCGAACACGACCAACTGTGGTTaGGCACTGTGGAATTTGTGTCGCGTCCTCCTCTGG +
Preference number: 6 (lower is better)
Translates to: HSSQTPNTTNCG*ALWNLCRVLLW
Trigger: CCAGAGGAGGACGCGACACAAATTCCACAGTGCTCAACCACAGTTGGTCGTGTTCGGAGTTTGGCTTGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239298.2
CDS GCA 72 bp GCTGATCGAGCAATGCCGCTGTCCCTGTCTTCATTCTaGCCTCTGCTTGGCATATCAACAGGTGTGCTGTGT +
Preference number: 6 (lower is better)
Translates to: ADRAMPLSLSSF*PLLGISTGVLC
Trigger: ACACAGCACACCTGTTGATATGCCAAGCAGAGGGCAGAATGAAGACAGGGACAGCGGCATTGCTCGATCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
ENSMUST00000239298.2
CDS CCA 72 bp GGGAAGTGGGAGAAAAAGAAGTCCTGGAAATCCCGCTaGGCGGCCTCTCTCTCACACAGGGAAAAGATGATG +
Preference number: 6 (lower is better)
Translates to: GKWEKKKSWKSR*AASLSHREKMM
Trigger: CATCATCTTTTCCCTGTGTGAGAGAGAGGCCGCCCAGCGGGATTTCCAGGACTTCTTTTTCTCCCACTTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
ENSMUST00000239298.2
CDS CCA 72 bp GTGTCCATGCTAGAGCTGGCAGAGGCACTAGCCCCATaGAAATGTCCACAGGCCTTTAATCGCTCCTCCATT +
Preference number: 6 (lower is better)
Translates to: VSMLELAEALAP*KCPQAFNRSSI
Trigger: AATGGAGGAGCGATTAAAGGCCTGTGGACATTTCCATGGGGCTAGTGCCTCTGCCAGCTCTAGCATGGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS CCA 72 bp GAATGTCTCCTTCGCTCCTGTAGTTGCCCTTACCACTaGCATCCCCATAGGGGACATCTGCAGCAATCAGCA +
Preference number: 6 (lower is better)
Translates to: ECLLRSCSCPYH*HPHRGHLQQSA
Trigger: TGCTGATTGCTGCAGATGTCCCCTATGGGGATGCCAGTGGTAAGGGCAACTACAGGAGCGAAGGAGACATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS CCA 72 bp TGCTGGTTCCATGCAGCACCAGATCAGGCATGTACGTaGCACAGTAACCTGCCAGAAGTGAGCGGCCAAAAT +
Preference number: 6 (lower is better)
Translates to: CWFHAAPDQACT*HSNLPEVSGQN
Trigger: ATTTTGGCCGCTCACTTCTGGCAGGTTACTGTGCCACGTACATGCCTGATCTGGTGCTGCATGGAACCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS CCA 72 bp CAAGTGGTATCGGTCAGACATCTGGCTGACTCCTGTTaGCCTACTGGCCAGTTTGTGCTGTCTGCTGTACCA +
Preference number: 6 (lower is better)
Translates to: QVVSVRHLADSC*PTGQFVLSAVP
Trigger: TGGTACAGCAGACAGCACAAACTGGCCAGTAGGCCAACAGGAGTCAGCCAGATGTCTGACCGATACCACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239298.2
CDS CAA 72 bp GCCTTGAGGTATCCACGAACTGTCAGGTTCTGCCTCTaGGAAGCCCATACTACTGGCCTCGGAATTCTGCTC +
Preference number: 6 (lower is better)
Translates to: ALRYPRTVRFCL*EAHTTGLGILL
Trigger: GAGCAGAATTCCGAGGCCAGTAGTATGGGCTTCCAAGAGGCAGAACCTGACAGTTCGTGGATACCTCAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
ENSMUST00000239298.2
CDS CAA 72 bp TGCGGCACAAAGGGAATGTGCAAGGGGGCCATCAACTaGGCTAAGTTGTCCCACAGCATGTGTCATGTTGGC +
Preference number: 6 (lower is better)
Translates to: CGTKGMCKGAIN*AKLSHSMCHVG
Trigger: GCCAACATGACACATGCTGTGGGACAACTTAGCCAAGTTGATGGCCCCCTTGCACATTCCCTTTGTGCCGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS CAA 90 bp GGTCCATCCTCCTTCTTACCCTGGGCACCTCACAGCTGGGAGGACTaGAAGAACAATCCTGGGTTGCCTCTTGGTCATTCTGTTTGTCCT +
Preference number: 6 (lower is better)
Translates to: GPSSFLPWAPHSWED*KNNPGLPLGHSVCP
Trigger: AGGACAAACAGAATGACCAAGAGGCAACCCAGGATTGTTCTTCAAGTCCTCCCAGCTGTGAGGTGCCCAGGGTAAGAAGGAGGATGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS CAA 90 bp GCCCCATGGAAATGTCCACAGGCCTTTAATCGCTCCTCCATTCTTTaGGTCCGGCTTTCAAAGTCAGACTCCGGGGAGATGGAACTCCCA +
Preference number: 6 (lower is better)
Translates to: APWKCPQAFNRSSIL*VRLSKSDSGEMELP
Trigger: TGGGAGTTCCATCTCCCCGGAGTCTGACTTTGAAAGCCGGACCAAAAGAATGGAGGAGCGATTAAAGGCCTGTGGACATTTCCATGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS CAA 90 bp CTGATCGAGCAATGCCGCTGTCCCTGTCTTCATTCTGCCCTCTGCTaGGCATATCAACAGGTGTGCTGTGTGCTGCAAAGAAAGAAGCGC +
Preference number: 6 (lower is better)
Translates to: LIEQCRCPCLHSALC*AYQQVCCVLQRKKR
Trigger: GCGCTTCTTTCTTTGCAGCACACAGCACACCTGTTGATATGCCAAGCAGAGGGCAGAATGAAGACAGGGACAGCGGCATTGCTCGATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000133154.7
CDS CCA 72 bp AACTGTCAGGTTCTGCCTCTTGGAAGCCCATACTACTaGCCTCGGAATTCTGCTCTGGCCTCTTGCATCTGT +
Preference number: 6 (lower is better)
Translates to: NCQVLPLGSPYY*PRNSALASCIC
Trigger: ACAGATGCAAGAGGCCAGAGCAGAATTCCGAGGCCAGTAGTATGGGCTTCCAAGAGGCAGAACCTGACAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
ENSMUST00000239298.2
CDS CCA 72 bp TCAAAGTCAGACTCCGGGGAGATGGAACTCCCAATGTaGAAAGTGACCTTTTCGACAGGAGGATCCTCCTGG +
Preference number: 6 (lower is better)
Translates to: SKSDSGEMELPM*KVTFSTGGSSW
Trigger: CCAGGAGGATCCTCCTGTCGAAAAGGTCACTTTCCACATTGGGAGTTCCATCTCCCCGGAGTCTGACTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS CCA 72 bp CACTGTCTCCAAGAGCACTATCCAAGCTCTCGTTCCTaGGAATGTCTCCTTCGCTCCTGTAGTTGCCCTTAC +
Preference number: 6 (lower is better)
Translates to: HCLQEHYPSSRS*ECLLRSCSCPY
Trigger: GTAAGGGCAACTACAGGAGCGAAGGAGACATTCCCAGGAACGAGAGCTTGGATAGTGCTCTTGGAGACAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS CAA 72 bp TCACTCAAGCCAAACTCCGAACACGACCAACTGTGGTaGAGCACTGTGGAATTTGTGTCGCGTCCTCCTCTG +
Preference number: 6 (lower is better)
Translates to: SLKPNSEHDQLW*STVEFVSRPPL
Trigger: CAGAGGAGGACGCGACACAAATTCCACAGTGCTCAACCACAGTTGGTCGTGTTCGGAGTTTGGCTTGAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239298.2
CDS CAA 90 bp CTGATCGAGCAATGCCGCTGTCCCTGTCTTCATTCTGCCCTCTGCTaGGCATATCAACAGGTGTGCTGTGTGCTAGGTTACTTCCAGTAC +
Preference number: 6 (lower is better)
Translates to: LIEQCRCPCLHSALC*AYQQVCCVLGYFQY
Trigger: GTACTGGAAGTAACCTAGCACACAGCACACCTGTTGATATGCCAAGCAGAGGGCAGAATGAAGACAGGGACAGCGGCATTGCTCGATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000239298.2
CDS CAA 90 bp CCCTGGGCACCTCACAGCTGGGAGGACTTGAAGAACAATCCTGGGTaGCCTCTTGGTCATTCTGTTTGTCCTCACAGAATATGCCTTGAG +
Preference number: 6 (lower is better)
Translates to: PWAPHSWEDLKNNPG*PLGHSVCPHRICLE
Trigger: CTCAAGGCATATTCTGTGAGGACAAACAGAATGACCAAGAGGCAACCCAGGATTGTTCTTCAAGTCCTCCCAGCTGTGAGGTGCCCAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS CAA 90 bp AGGCGGATGTCACTCAAGCCAAACTCCGAACACGACCAACTGTGGTaGAGCACTGTGGAATTTGTGTCGCGTCCTCCTCTGGCACATTTT +
Preference number: 6 (lower is better)
Translates to: RRMSLKPNSEHDQLW*STVEFVSRPPLAHF
Trigger: AAAATGTGCCAGAGGAGGACGCGACACAAATTCCACAGTGCTCAACCACAGTTGGTCGTGTTCGGAGTTTGGCTTGAGTGACATCCGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239298.2
CDS CAA 90 bp ACAGAATATGCCTTGAGGTATCCACGAACTGTCAGGTTCTGCCTCTaGGAAGCCCATACTACTGGCCTCGGAATTCTGCTCTGGCCTCTT +
Preference number: 6 (lower is better)
Translates to: TEYALRYPRTVRFCL*EAHTTGLGILLWPL
Trigger: AAGAGGCCAGAGCAGAATTCCGAGGCCAGTAGTATGGGCTTCCAAGAGGCAGAACCTGACAGTTCGTGGATACCTCAAGGCATATTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
ENSMUST00000239298.2
CDS GCA 72 bp CCATACTACTGGCCTCGGAATTCTGCTCTGGCCTCTTaGATCTGTTCTTTTCAGGTTTGTGACCCAGTTCGC +
Preference number: 6 (lower is better)
Translates to: PYYWPRNSALAS*ICSFQVCDPVR
Trigger: GCGAACTGGGTCACAAACCTGAAAAGAACAGATGCAAGAGGCCAGAGCAGAATTCCGAGGCCAGTAGTATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
ENSMUST00000239298.2
CDS CCA 72 bp AATGTCCACAGGCCTTTAATCGCTCCTCCATTCTTTTaGTCCGGCTTTCAAAGTCAGACTCCGGGGAGATGG +
Preference number: 6 (lower is better)
Translates to: NVHRPLIAPPFF*SGFQSQTPGRW
Trigger: CCATCTCCCCGGAGTCTGACTTTGAAAGCCGGACCAAAAGAATGGAGGAGCGATTAAAGGCCTGTGGACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS CCA 72 bp GCTGTAAGATGGACTGAAGTAAACTGGACACCTGACTaGAGACCAAGACATCCTGGCCCAGCTTCATGGTGT +
Preference number: 6 (lower is better)
Translates to: AVRWTEVNWTPD*RPRHPGPASWC
Trigger: ACACCATGAAGCTGGGCCAGGATGTCTTGGTCTCCAGTCAGGTGTCCAGTTTACTTCAGTCCATCTTACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS CCA 72 bp ATGTCACTCAAGCCAAACTCCGAACACGACCAACTGTaGTTGAGCACTGTGGAATTTGTGTCGCGTCCTCCT +
Preference number: 6 (lower is better)
Translates to: MSLKPNSEHDQL*LSTVEFVSRPP
Trigger: AGGAGGACGCGACACAAATTCCACAGTGCTCAACCACAGTTGGTCGTGTTCGGAGTTTGGCTTGAGTGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239298.2
CDS TCA 72 bp TCCACTTCCAAGGACTCTTCAGTCCTGTCACAACTGTaGCCTAGTTCTAGCAGGGCTAAGACACACGCTTCA +
Preference number: 6 (lower is better)
Translates to: STSKDSSVLSQL*PSSSRAKTHAS
Trigger: TGAAGCGTGTGTCTTAGCCCTGCTAGAACTAGGTCACAGTTGTGACAGGACTGAAGAGTCCTTGGAAGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS CCA 72 bp TCCAGGGCGGTTATTATCTTGCTCCCATTTATAACCTaGTCATCCTCACTGGGATTTCCACTCCAGCTCAGC +
Preference number: 6 (lower is better)
Translates to: SRAVIILLPFIT*SSSLGFPLQLS
Trigger: GCTGAGCTGGAGTGGAAATCCCAGTGAGGATGACCAGGTTATAAATGGGAGCAAGATAATAACCGCCCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
ENSMUST00000239298.2
CDS CCA 72 bp ATTTCTAACATTTGCCTTGCTGGTGCTCTGAGACCTTaGCAGAGGCAGCTCCACTTCCAAGGACTCTTCAGT +
Preference number: 6 (lower is better)
Translates to: ISNICLAGALRP*QRQLHFQGLFS
Trigger: ACTGAAGAGTCCTTGGAAGTGGAGCTGCCTCTGCCAAGGTCTCAGAGCACCAGCAAGGCAAATGTTAGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS CAA 72 bp CCATCAGACGGCTCACATAGAACTGGACTCGGAGACTaGATTCAGAGATCTTCCTACAGGAGATCATGGCCT +
Preference number: 6 (lower is better)
Translates to: PSDGSHRTGLGD*IQRSSYRRSWP
Trigger: AGGCCATGATCTCCTGTAGGAAGATCTCTGAATCAAGTCTCCGAGTCCAGTTCTATGTGAGCCGTCTGATGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
ENSMUST00000239298.2
CDS CAA 72 bp AAATGTCCACAGGCCTTTAATCGCTCCTCCATTCTTTaGGTCCGGCTTTCAAAGTCAGACTCCGGGGAGATG +
Preference number: 6 (lower is better)
Translates to: KCPQAFNRSSIL*VRLSKSDSGEM
Trigger: CATCTCCCCGGAGTCTGACTTTGAAAGCCGGACCAAAAGAATGGAGGAGCGATTAAAGGCCTGTGGACATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS CAA 90 bp CCAGTGCTTCCATCAGACGGCTCACATAGAACTGGACTCGGAGACTaGATTCAGAGATCTTCCTACAGGAGATCATGGCCTTTTCGATTG +
Preference number: 6 (lower is better)
Translates to: PVLPSDGSHRTGLGD*IQRSSYRRSWPFRL
Trigger: CAATCGAAAAGGCCATGATCTCCTGTAGGAAGATCTCTGAATCAAGTCTCCGAGTCCAGTTCTATGTGAGCCGTCTGATGGAAGCACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
ENSMUST00000239298.2
CDS TCA 72 bp CATCAGACGGCTCACATAGAACTGGACTCGGAGACTTaGTTCAGAGATCTTCCTACAGGAGATCATGGCCTT +
Preference number: 6 (lower is better)
Translates to: HQTAHIELDSET*FRDLPTGDHGL
Trigger: AAGGCCATGATCTCCTGTAGGAAGATCTCTGAATCAAGTCTCCGAGTCCAGTTCTATGTGAGCCGTCTGATG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
ENSMUST00000239298.2
CDS CCA 72 bp GAAGCTTATAGAGCTGTAAGATGGACTGAAGTAAACTaGACACCTGACTGGAGACCAAGACATCCTGGCCCA +
Preference number: 6 (lower is better)
Translates to: EAYRAVRWTEVN*TPDWRPRHPGP
Trigger: TGGGCCAGGATGTCTTGGTCTCCAGTCAGGTGTCCAGTTTACTTCAGTCCATCTTACAGCTCTATAAGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS CAA 72 bp TCTTCCACCTCTCCCTTTTCCAGGGCGGTTATTATCTaGCTCCCATTTATAACCTGGTCATCCTCACTGGGA +
Preference number: 6 (lower is better)
Translates to: SSTSPFSRAVII*LPFITWSSSLG
Trigger: TCCCAGTGAGGATGACCAGGTTATAAATGGGAGCAAGATAATAACCGCCCTGGAAAAGGGAGAGGTGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
ENSMUST00000239298.2
CDS CAA 72 bp CCTCACAGCTGGGAGGACTTGAAGAACAATCCTGGGTaGCCTCTTGGTCATTCTGTTTGTCCTCACAGAATA +
Preference number: 6 (lower is better)
Translates to: PHSWEDLKNNPG*PLGHSVCPHRI
Trigger: TATTCTGTGAGGACAAACAGAATGACCAAGAGGCAACCCAGGATTGTTCTTCAAGTCCTCCCAGCTGTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS CAA 90 bp TACTCAGACTCTTCCACCTCTCCCTTTTCCAGGGCGGTTATTATCTaGCTCCCATTTATAACCTGGTCATCCTCACTGGGATTTCCACTC +
Preference number: 6 (lower is better)
Translates to: YSDSSTSPFSRAVII*LPFITWSSSLGFPL
Trigger: GAGTGGAAATCCCAGTGAGGATGACCAGGTTATAAATGGGAGCAAGATAATAACCGCCCTGGAAAAGGGAGAGGTGGAAGAGTCTGAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
ENSMUST00000239298.2
CDS TCA 72 bp TCTTGGTCATTCTGTTTGTCCTCACAGAATATGCCTTaGGGTATCCACGAACTGTCAGGTTCTGCCTCTTGG +
Preference number: 6 (lower is better)
Translates to: SWSFCLSSQNMP*GIHELSGSASW
Trigger: CCAAGAGGCAGAACCTGACAGTTCGTGGATACCTCAAGGCATATTCTGTGAGGACAAACAGAATGACCAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS CAA 72 bp CTCTTGGTCATTCTGTTTGTCCTCACAGAATATGCCTaGAGGTATCCACGAACTGTCAGGTTCTGCCTCTTG +
Preference number: 6 (lower is better)
Translates to: LLVILFVLTEYA*RYPRTVRFCLL
Trigger: CAAGAGGCAGAACCTGACAGTTCGTGGATACCTCAAGGCATATTCTGTGAGGACAAACAGAATGACCAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
CDS CCA 72 bp CCAAGCATGCTGACATCAGATGCTGGTCTCGTGTATTaGTACTTTGGAAGCTGTTGCTTAGCGTGTTGTAAA +
Preference number: 6 (lower is better)
Translates to: PSMLTSDAGLVY*YFGSCCLACCK
Trigger: TTTACAACACGCTAAGCAACAGCTTCCAAAGTACCAATACACGAGACCAGCATCTGATGTCAGCATGCTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
ENSMUST00000239298.2
CDS CCA 72 bp AAACATCATCTCCCCAAGCATGCTGACATCAGATGCTaGTCTCGTGTATTGGTACTTTGGAAGCTGTTGCTT +
Preference number: 6 (lower is better)
Translates to: KHHLPKHADIRC*SRVLVLWKLLL
Trigger: AAGCAACAGCTTCCAAAGTACCAATACACGAGACCAGCATCTGATGTCAGCATGCTTGGGGAGATGATGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
ENSMUST00000239298.2
CDS CCA 72 bp GATGCTGATGGCGATCTTCTTCCTTCTAACCATAGCTaGATTAGAGCTACACGTTTCTTCGGCCAAGCTAAA +
Preference number: 6 (lower is better)
Translates to: DADGDLLPSNHS*IRATRFFGQAK
Trigger: TTTAGCTTGGCCGAAGAAACGTGTAGCTCTAATCCAGCTATGGTTAGAAGGAAGAAGATCGCCATCAGCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
ENSMUST00000239298.2
CDS TCA 72 bp TGGCACATTTTGGAATCTTTGCACATACAAGTGTCTTaGAAATCCTCCCAGCACCACAAGTGGTATCGGTCA +
Preference number: 6 (lower is better)
Translates to: WHILESLHIQVS*KSSQHHKWYRS
Trigger: TGACCGATACCACTTGTGGTGCTGGGAGGATTTTCAAGACACTTGTATGTGCAAAGATTCCAAAATGTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239298.2
CDS CAA 90 bp ACCCAAATTGTACTGATTTGTGTTCAGTTTTCCAGCCTGAGGATCTaGGTTAATGTATTCGAAGCTGTCCTGCAGATTATTTGTACTTCC +
Preference number: 6 (lower is better)
Translates to: TQIVLICVQFSSLRI*VNVFEAVLQIICTS
Trigger: GGAAGTACAAATAATCTGCAGGACAGCTTCGAATACATTAACCAAGATCCTCAGGCTGGAAAACTGAACACAAATCAGTACAATTTGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
ENSMUST00000239298.2
CDS CAA 72 bp ACCCATTGTAGCAGAAAAGACTTTACTAATCATCAGTaGTGGAGGAGATCGTATGTAGTGTATCTTCAGGGT +
Preference number: 6 (lower is better)
Translates to: THCSRKDFTNHQ*WRRSYVVYLQG
Trigger: ACCCTGAAGATACACTACATACGATCTCCTCCACAACTGATGATTAGTAAAGTCTTTTCTGCTACAATGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
ENSMUST00000239298.2
CDS CAA 72 bp GTACTGATTTGTGTTCAGTTTTCCAGCCTGAGGATCTaGGTTAATGTATTCGAAGCTGTCCTGCAGATTATT +
Preference number: 6 (lower is better)
Translates to: VLICVQFSSLRI*VNVFEAVLQII
Trigger: AATAATCTGCAGGACAGCTTCGAATACATTAACCAAGATCCTCAGGCTGGAAAACTGAACACAAATCAGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000076136.7
ENSMUST00000133154.7
ENSMUST00000239298.2