Pregenerated sensors for FNIP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035992Ensembl transcript IDs: ENSMUST00000046835.14, ENSMUST00000143650.2
Found 183 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATGGGAATCTAGAACCTTaGGCCTCAAAAAGATTGGCT | + |
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Preference number: 2 (lower is better) Translates to: VGILLNTHKEQDKCNQTHGNLEP*ASKRLA Trigger: AGCCAATCTTTTTGAGGCTCAAGGTTCTAGATTCCC...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
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| 3UTR CAA 90 bp | GAGGCATTATGCAAACTGTTAGTGATCATCTGCACTGCGTGCCAATaGCAACAAAATGAAATCTGTAGTAGTATGTTTATTGCACTTCAT | + |
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Preference number: 2 (lower is better) Translates to: EALCKLLVIICTACQ*QQNEICSSMFIALH Trigger: ATGAAGTGCAATAAACATACTACTACAGATTTCATTTTGTTGCAATTGGCACGCAGTGCAGATGATCACTAACAGTTTGCATAATGCCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
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| 3UTR-3UTR CCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATTATGTACACTTGGGATaGGCACATGACATCTTCACT | + |
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Preference number: 2 (lower is better) Translates to: VGILLNTHKEQDKCNQTHYVHLG*AHDIFT Trigger: AGTGAAGATGTCATGTGCCCATCCCAAGTGTACATA...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
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| 3UTR-3UTR TCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATGGTAGTAGAGTATATTaGAAACATGATCTACCCACC | + |
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Preference number: 2 (lower is better) Translates to: VGILLNTHKEQDKCNQTHGSRVY*KHDLPT Trigger: GGTGGGTAGATCATGTTTTCAATATACTCTACTACC...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
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| 3UTR-3UTR GCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATTTACACTTTGGCTTTTaGAAATTCCACCCCTCTACA | + |
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Preference number: 2 (lower is better) Translates to: VGILLNTHKEQDKCNQTHLHFGF*KFHPST Trigger: TGTAGAGGGGTGGAATTTGCAAAAGCCAAAGTGTAA...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
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| 3UTR-3UTR CCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATCAGCGCCTGTCTCCTTaGTTTCTATTCAACTTTAAA | + |
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Preference number: 2 (lower is better) Translates to: VGILLNTHKEQDKCNQTHQRLSP*FLFNFK Trigger: TTTAAAGTTGAATAGAAACCAAGGAGACAGGCGCTG...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
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| 3UTR GCA 72 bp | AACATTCTCAGAGGACAGCTACCGATGGAGGCATTATaGAAACTGTTAGTGATCATCTGCACTGCGTGCCAA | + |
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Preference number: 3 (lower is better) Translates to: NILRGQLPMEAL*KLLVIICTACQ Trigger: TTGGCACGCAGTGCAGATGATCACTAACAGTTTGCATAATGCCTCCATCGGTAGCTGTCCTCTGAGAATGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
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| 3UTR-3UTR CAA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATGTTACACTTTGGCTTTaGCAAATTCCACCCCTCTAC | + |
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Preference number: 3 (lower is better) Translates to: VGILLNTHKEQDKCNQTHVTLWL*QIPPLY Trigger: GTAGAGGGGTGGAATTTGCAAAAGCCAAAGTGTAAC...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
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| 3UTR-3UTR CAA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATGATACATATGTACACTaGGGATGGGCACATGACATC | + |
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Preference number: 3 (lower is better) Translates to: VGILLNTHKEQDKCNQTHDTYVH*GWAHDI Trigger: GATGTCATGTGCCCATCCCAAGTGTACATATGTATC...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
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| 3UTR TCA 72 bp | GAGTTTTTAAGAAACTATAGACCTTTCCAGCAAAGCTaGGTTTTGAGAATATTAGGTGCACAAGCCATTCAC | + |
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Preference number: 3 (lower is better) Translates to: EFLRNYRPFQQS*VLRILGAQAIH Trigger: GTGAATGGCTTGTGCACCTAATATTCTCAAAACTCAGCTTTGCTGGAAAGGTCTATAGTTTCTTAAAAACTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
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| 3UTR-3UTR CAA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATAAAATAAAAAGTCATTaGGTCTACACAGACCGCAGC | + |
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Preference number: 3 (lower is better) Translates to: VGILLNTHKEQDKCNQTHKIKSH*VYTDRS Trigger: GCTGCGGTCTGTGTAGACCAAATGACTTTTTATTTT...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
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| 3UTR-3UTR CAA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATATTCTAAGTTACACTTaGGCTTTTGCAAATTCCACC | + |
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Preference number: 3 (lower is better) Translates to: VGILLNTHKEQDKCNQTHILSYT*AFANST Trigger: GGTGGAATTTGCAAAAGCCAAAGTGTAACTTAGAAT...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
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| CDS-3UTR GCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATAGGCGGAGCGGACCCTaGTCAGAGAAAGCCCGCCTG | + |
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Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHRRSGP*SEKARL Trigger: CAGGCGGGCTTTCTCTGAGCAGGGTCCGCTCCGCCT...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
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| CDS-3UTR TCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATAGAAAGAGGCACTCCTaGTCAGGCGGAGCGGACCCT | + |
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Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHRKRHS*SGGADP Trigger: AGGGTCCGCTCCGCCTGATCAGGAGTGCCTCTTTCT...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
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| CDS-3UTR TCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATATCCGCTCCGCTTGCTaGAGAGCTTCTGGAACAGGG | + |
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Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHIRSAC*RASGTG Trigger: CCCTGTTCCAGAAGCTCTTCAGCAAGCGGAGCGGAT...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
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| CDS-3UTR GCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATTGGAGAGTGGGTGCTTaGTACCGCAGCCAGAAGAGG | + |
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Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHWRVGA*YRSQKR Trigger: CCTCTTCTGGCTGCGGTAGCAAGCACCCACTCTCCA...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
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| CDS-3UTR CCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATGCAACGTATGGAGAGTaGGTGCTTGCTACCGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHATYGE*VLATAA Trigger: GGCTGCGGTAGCAAGCACCCACTCTCCATACGTTGC...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
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| CDS-3UTR TCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATCCTAGCTCCTTGACATaGACACGCATCTGTCCCCTC | + |
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Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHPSSLT*TRICPL Trigger: GAGGGGACAGATGCGTGTTCATGTCAAGGAGCTAGG...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
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| CDS-3UTR GCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATAAGCCCGCCTGGGGCTaGAGAACTGTGAAAGACCTA | + |
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Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHKPAWG*RTVKDL Trigger: TAGGTCTTTCACAGTTCTGCAGCCCCAGGCGGGCTT...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
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| CDS-3UTR GCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATCGTATGGAGAGTGGGTaGTTGCTACCGCAGCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHRMESG*LLPQPE Trigger: TTCTGGCTGCGGTAGCAAGCACCCACTCTCCATACG...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
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| CDS-3UTR CCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATCCAAACTTCTCTGGCTaGCATCAGCTGATCTCCGGC | + |
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Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHPNFSG*HQLISG Trigger: GCCGGAGATCAGCTGATGCCAGCCAGAGAAGTTTGG...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
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| CDS-3UTR TCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATCTGGCTGGCATCAGCTaGTCTCCGGCTCATTTTCAT | + |
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Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHLAGIS*SPAHFH Trigger: ATGAAAATGAGCCGGAGATCAGCTGATGCCAGCCAG...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
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| CDS-3UTR TCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATGCTGTCCATTTGGCATaGCTGTTGGAACCCAGGCAA | + |
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Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHAVHLA*LLEPRQ Trigger: TTGCCTGGGTTCCAACAGTCATGCCAAATGGACAGC...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
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| CDS-3UTR TCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATCCACTCCTAGCTCCTTaGCATGAACACGCATCTGTC | + |
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Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHPLLAP*HEHASV Trigger: GACAGATGCGTGTTCATGTCAAGGAGCTAGGAGTGG...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
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| CDS-3UTR CCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATGTTTGGGGAGGGGAATaGGGTGATGAACAAGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHVWGGE*GDEQAA Trigger: AGCAGCTTGTTCATCACCCCATTCCCCTCCCCAAAC...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
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| CDS-3UTR TCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATCTTCTCTGGAGTCCCTaGCATCATTGTAAGCCAGAC | + |
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Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHLLWSP*HHCKPD Trigger: GTCTGGCTTACAATGATGTCAGGGACTCCAGAGAAG...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
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| CDS-3UTR TCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATTTCCTCTGGTCCTGCTaGGGAAAGCAGGCATTACAT | + |
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Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHFLWSC*GKQALH Trigger: ATGTAATGCCTGCTTTCCTCAGCAGGACCAGAGGAA...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
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| CDS-3UTR TCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATGTCAGGAACATAAGATaGGCAGTAGCCACCCAGCAA | + |
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Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHVRNIR*AVATQQ Trigger: TTGCTGGGTGGCTACTGCTCATCTTATGTTCCTGAC...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
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| CDS-3UTR TCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATAGCATGAGACAAATCTaGTACCAGGCACTGACGGAG | + |
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Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHSMRQI*YQALTE Trigger: CTCCGTCAGTGCCTGGTATCAGATTTGTCTCATGCT...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
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| CDS-3UTR GCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATATGCAGAACGTGCTATaGCGCTGTCTCTGTCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHMQNVL*RCLCPH Trigger: ATGAGGACAGAGACAGCGGCATAGCACGTTCTGCAT...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
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| CDS-3UTR GCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATTTACTCGTCTCTGACTaGTGGCCACTTGAACAGTCC | + |
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Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHLLVSD*WPLEQS Trigger: GGACTGTTCAAGTGGCCAGCAGTCAGAGACGAGTAA...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
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| CDS-3UTR CCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATAGAACTATCTCCTCCTaGCTTCAGCTGGCAGCACTT | + |
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Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHRTISS*LQLAAL Trigger: AAGTGCTGCCAGCTGAAGCCAGGAGGAGATAGTTCT...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
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| CDS-3UTR CCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATTCCAAACTTGTTGTTTaGCTACGTCGCCAACGTCGC | + |
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Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHSKLVV*LRRQRR Trigger: GCGACGTTGGCGACGTAGCCAAACAACAAGTTTGGA...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
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| CDS-3UTR CCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATAGGTGGCTGTCCATTTaGCATGACTGTTGGAACCCA | + |
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Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHRWLSI*HDCWNP Trigger: TGGGTTCCAACAGTCATGCCAAATGGACAGCCACCT...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
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| CDS-3UTR CCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATCATGGGGGACAAGAATaGAGAGGGAATTCCTCTGGT | + |
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Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHHGGQE*RGNSSG Trigger: ACCAGAGGAATTCCCTCTCCATTCTTGTCCCCCATG...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
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| CDS-3UTR CCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATCTCGTCTCTGACTGCTaGCCACTTGAACAGTCCATT | + |
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Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHLVSDC*PLEQSI Trigger: AATGGACTGTTCAAGTGGCCAGCAGTCAGAGACGAG...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
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| CDS-3UTR TCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATACGATCAGTCGAATCTaGCTTGGGTCAAATTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHTISRI*LGSNSG Trigger: GCCAGAATTTGACCCAAGTCAGATTCGACTGATCGT...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
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| CDS-3UTR TCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATGTAGCTCATTGCTACTaGGCCAAACATCATCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHVAHCY*AKHHLS Trigger: GGAGAGATGATGTTTGGCTCAGTAGCAATGAGCTAC...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
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| CDS-3UTR TCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATGGGGCTGCAGAACTGTaGAAGACCTATATTTCCAAG | + |
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Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHGAAEL*KTYISK Trigger: CTTGGAAATATAGGTCTTTCACAGTTCTGCAGCCCC...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
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| CDS-3UTR TCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATTCCATTGGGTTGCTGTaGACTGCAAAGAAAGAGGCA | + |
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Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHSIGLL*TAKKEA Trigger: TGCCTCTTTCTTTGCAGTTCACAGCAACCCAATGGA...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
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| CDS-3UTR TCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATGGAACCCAGGCAAGATaGTTGGTCAAAACTGCAGTA | + |
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Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHGTQAR*LVKTAV Trigger: TACTGCAGTTTTGACCAATCATCTTGCCTGGGTTCC...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
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| CDS-3UTR TCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATAGAGGGTTATATGGATaGGTCTTTGCCAACATGCCC | + |
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Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHRGLYG*VFANMP Trigger: GGGCATGTTGGCAAAGACTCATCCATATAACCCTCT...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
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| CDS-3UTR TCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATTTGGCAATGTTGGGCTaGACAGCACTCACTTCAATC | + |
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Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHLAMLG*TALTSI Trigger: GATTGAAGTGAGTGCTGTTCAGCCCAACATTGCCAA...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
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| CDS-3UTR GCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATTGGGTTGCTGTGAACTaGAAAGAAAGAGGCACTCCT | + |
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Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHWVAVN*KERGTP Trigger: AGGAGTGCCTCTTTCTTTGCAGTTCACAGCAACCCA...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
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| CDS-3UTR GCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATGAGTCTTTGCCAACATaGCCACACTCTGAGAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHESLPT*PHSERN Trigger: ATTCCTCTCAGAGTGTGGGCATGTTGGCAAAGACTC...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR GCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATCCAGGTCTTGTCGTTTaGCAACGACTACAGTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHPGLVV*QRLQFL Trigger: CAAGAACTGTAGTCGTTGGCAAACGACAAGACCTGG...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR GCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATTCCTGTGGGTCTCATTaGTGTGCCTGTGTGATTATC | + |
|
Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHSCGSH*CACVII Trigger: GATAATCACACAGGCACAGCAATGAGACCCACAGGA...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR CCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATCAGTCGAATCTGACTTaGGTCAAATTCTGGCAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHQSNLT*VKFWQG Trigger: CCCTTGCCAGAATTTGACCCAAGTCAGATTCGACTG...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR CCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATTATGCCAAACTTCTCTaGCTGGCATCAGCTGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHYAKLL*LASADL Trigger: GAGATCAGCTGATGCCAGCCAGAGAAGTTTGGCATA...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR CCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATAAACGATGGCAAAGCTaGTTCTTCTCTGGAGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHKRWQS*FFSGVP Trigger: AGGGACTCCAGAGAAGAACCAGCTTTGCCATCGTTT...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR CCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATTATCTGAGCAACGTATaGAGAGTGGGTGCTTGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHYLSNV*RVGACY Trigger: GTAGCAAGCACCCACTCTCCATACGTTGCTCAGATA...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR TCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATCCAAAGACCTTGACTTaGGCATCATTACAGAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHPKTLT*ASLQSF Trigger: GAAGCTCTGTAATGATGCTCAAGTCAAGGTCTTTGG...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR TCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATCATGCTTTCTGGATCTaGATGACTCCAACAAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHHAFWI*MTPTRK Trigger: CTTCCTTGTTGGAGTCATTCAGATCCAGAAAGCATG...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR GCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATGCATGTCCATTGGGTTaGTGTGAACTGCAAAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHACPLG*CELQRK Trigger: CTTTCTTTGCAGTTCACAGCAACCCAATGGACATGC...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR GCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATATATGGATGAGTCTTTaGCAACATGCCCACACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHIWMSL*QHAHTL Trigger: CAGAGTGTGGGCATGTTGGCAAAGACTCATCCATAT...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR CCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATGAGAACCCTGGTATTTaGGACACTGGTCTTTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHENPGI*DTGLFH Trigger: ATGGAAAAGACCAGTGTCCCAAATACCAGGGTTCTC...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR CCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATCACAGGAAAATGCACTaGGCACATTCTTATCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHHRKMH*AHSYLE Trigger: CTCCAGATAAGAATGTGCCCAGTGCATTTTCCTGTG...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR CCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATCAAAGTTGGCAATGTTaGGCTGAACAGCACTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHQSWQC*AEQHSL Trigger: AAGTGAGTGCTGTTCAGCCCAACATTGCCAACTTTG...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR TCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATCGTCTTTCACAGTCTTaGTATACGATCAGTCGAATC | + |
|
Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHRLSQS*YTISRI Trigger: GATTCGACTGATCGTATATCAAGACTGTGAAAGACG...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR TCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATACTTCCCAAAGACCTTaGCTTGAGCATCATTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHTSQRP*LEHHYR Trigger: TCTGTAATGATGCTCAAGTCAAGGTCTTTGGGAAGT...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR TCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATAGAGCTGGCAAGAATTaGTTTTTGGAGGCATTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHRAGKN*FLEAFS Trigger: GGAAAATGCCTCCAAAAATCAATTCTTGCCAGCTCT...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR TCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATTGCCCAAGGACTGGATaGCTGCAATATTTACAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHCPRTG*LQYLQL Trigger: TAACTGTAAATATTGCAGTCATCCAGTCCTTGGGCA...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR TCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATATTGCTGTGCCTGTGTaGTTATCTGAATCCAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHIAVPV*LSESSN Trigger: ATTGCTGGATTCAGATAATCACACAGGCACAGCAAT...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR GCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATAAGTATTCGATTGTATaGCAAACTTCTCTGGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHKYSIV*QTSLAG Trigger: GCCAGCCAGAGAAGTTTGGCATACAATCGAATACTT...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR GCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATCAAATCTCCAAGTTGTaGCCAAAGAGGGTTATATGG | + |
|
Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHQISKL*PKRVIW Trigger: CCATATAACCCTCTTTGGGCACAACTTGGAGATTTG...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR GCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATTGGGTCTCATTGCTGTaGCTGTGTGATTATCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHWVSLL*LCDYLN Trigger: ATTCAGATAATCACACAGGCACAGCAATGAGACCCA...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR CCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATTTTCCTCACAATTCCTaGATTAGGGCCACAACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHFPHNS*IRATTF Trigger: GAAAGTTGTGGCCCTAATCCAGGAATTGTGAGGAAA...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
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| CDS-3UTR CCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATTCCTTCATGAAACGATaGCAAAGCTGGTTCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHSFMKR*QSWFFS Trigger: AGAGAAGAACCAGCTTTGCCATCGTTTCATGAAGGA...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR CCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATAGTAATCACTGTGCCTaGCATAACAATGGCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHSNHCA*HNNGFI Trigger: GATGAAGCCATTGTTATGCCAGGCACAGTGATTACT...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR CCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATAAGATCTTCCAAAGTTaGCAATGTTGGGCTGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHKIFQS*QCWAEQ Trigger: CTGTTCAGCCCAACATTGCCAACTTTGGAAGATCTT...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR TCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATGCCACAACTTTCATCTaGCAGATTAAAGCTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHATTFI*QIKAFF Trigger: GAAGAAAGCTTTAATCTGTCAGATGAAAGTTGTGGC...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR TCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATTCCTTAGAGTTGTCTTaGGTATCTTCTCTTTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHSLELS*VSSLSG Trigger: ACCAGAAAGAGAAGATACTCAAGACAACTCTAAGGA...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR TCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATAACGTAACCTTTGTCTaGGTTACCTCACAGGAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHNVTFV*VTSQEN Trigger: ATTTTCCTGTGAGGTAACTCAGACAAAGGTTACGTT...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR TCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATTCCAAGGGCACTATCTaGACTTTCATTTCTTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHSKGTI*TFISWN Trigger: ATTCCAAGAAATGAAAGTTCAGATAGTGCCCTTGGA...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR TCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATCACTTCAATCAATTTTaGCCCAGGAAAAGGTATCTC | + |
|
Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHHFNQF*PRKRYL Trigger: GAGATACCTTTTCCTGGGTCAAAATTGATTGAAGTG...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR GCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATATGATTGGTCAAAACTaGAGTAATGAGAGCTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHMIGQN*SNESWQ Trigger: TTGCCAGCTCTCATTACTGCAGTTTTGACCAATCAT...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR GCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATAGCAATTCCTTATTCTaGCAGGATTCTTCTCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHSNSLF*QDSSLG Trigger: ACCAAGAGAAGAATCCTGGCAGAATAAGGAATTGCT...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR CCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATTGGTATTTGGGACACTaGTCTTTTCCATCAGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHWYLGH*SFPSED Trigger: ATCTTCTGATGGAAAAGACCAGTGTCCCAAATACCA...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR CCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATCCAAAGAGGGTTATATaGATGAGTCTTTGCCAACAT | + |
|
Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHPKRVI*MSLCQH Trigger: ATGTTGGCAAAGACTCATCCATATAACCCTCTTTGG...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR CCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATCAACTGTCTCTAACTTaGTGTCAAGGCAAGTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHQLSLT*CQGKFL Trigger: TAAGAACTTGCCTTGACACCAAGTTAGAGACAGTTG...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR CCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATGGGCACATTCTTATCTaGAGGTTTCTTTTCAACAAC | + |
|
Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHGHILI*RFLFNN Trigger: GTTGTTGAAAAGAAACCTCCAGATAAGAATGTGCCC...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR TCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATTTCTCTTTCTGGTTGTaGCACATTCTCTGTATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHFSFWL*HILCIL Trigger: CAAAATACAGAGAATGTGTCACAACCAGAAAGAGAA...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR TCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATAAAGCAGGCATTACATaGATCTTGATGAACTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHKAGIT*ILMNCF Trigger: GAAACAGTTCATCAAGATTCATGTAATGCCTGCTTT...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR TCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATTCATTTCCAATTCCTTaGAGAACAAAGTCAGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHSFPIP*RTKSGT Trigger: TGTTCCTGACTTTGTTCTTCAAGGAATTGGAAATGA...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR GCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATCAAGGACTGGATGACTaGAATATTTACAGTTACAGT | + |
|
Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHQGLDD*NIYSYS Trigger: ACTGTAACTGTAAATATTGCAGTCATCCAGTCCTTG...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR CCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATTGCAGTAATGAGAGCTaGCAAGAATTGATTTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHCSNES*QELIFG Trigger: TCCAAAAATCAATTCTTGCCAGCTCTCATTACTGCA...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR CCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATATTTACAGTTACAGTTaGGAGTTCTTGTCTCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHIYSYS*EFLSLL Trigger: CAGAAGAGACAAGAACTCCCAACTGTAACTGTAAAT...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR CCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATATTTTGCCCAAGGACTaGATGACTGCAATATTTACA | + |
|
Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHILPKD*MTAIFT Trigger: TGTAAATATTGCAGTCATCCAGTCCTTGGGCAAAAT...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| 3UTR CAA 72 bp | TGCAAACTGTTAGTGATCATCTGCACTGCGTGCCAATaGCAACAAAATGAAATCTGTAGTAGTATGTTTATT | + |
|
Preference number: 4 (lower is better) Translates to: CKLLVIICTACQ*QQNEICSSMFI Trigger: AATAAACATACTACTACAGATTTCATTTTGTTGCAATTGGCACGCAGTGCAGATGATCACTAACAGTTTGCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR GCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATCTGCTTTTGTTTCTATaGATTGTGATTAGCACATAC | + |
|
Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHLLLFL*IVISTY Trigger: GTATGTGCTAATCACAATGCATAGAAACAAAAGCAG...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR CCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATGATGAATTTTTAAGGTaGATCCTTTGTAGCTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHDEFLR*ILCSSL Trigger: CAATGAGCTACAAAGGATCCACCTTAAAAATTCATC...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR CCA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATAGGTTCCCCAATTCTTaGCATTGTATAAAGATTACA | + |
|
Preference number: 4 (lower is better) Translates to: VGILLNTHKEQDKCNQTHRFPNS*HCIKIT Trigger: TGTAATCTTTATACAATGCCAAGAATTGGGGAACCT...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS TCA 90 bp | CGATCAGTCGAATCTGACTTGGGTCAAATTCTGGCAAGGGCCAACTaGACGCGCAGTCCGGGTCGCGGGCGTCTCGTCCCGGCGCGCCTA | + |
|
Preference number: 5 (lower is better) Translates to: RSVESDLGQILARAN*TRSPGRGRLVPARL Trigger: TAGGCGCGCCGGGACGAGACGCCCGCGACCCGGACTGCGCGTTCAGTTGGCCCTTGCCAGAATTTGACCCAAGTCAGATTCGACTGATCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS CCA 90 bp | ACAGTCTTGATATACGATCAGTCGAATCTGACTTGGGTCAAATTCTaGCAAGGGCCAACTGAACGCGCAGTCCGGGTCGCGGGCGTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: TVLIYDQSNLTWVKF*QGPTERAVRVAGVS Trigger: CGAGACGCCCGCGACCCGGACTGCGCGTTCAGTTGGCCCTTGCCAGAATTTGACCCAAGTCAGATTCGACTGATCGTATATCAAGACTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS GCA 90 bp | GGAGGGGAATGGGGTGATGAACAAGCTGCTCAGAGATGCAGAACGTaGTATGCCGCTGTCTCTGTCCTCATTCAGTTCTCTTCCTGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: GGEWGDEQAAQRCRT*YAAVSVLIQFSSWH Trigger: ATGCCAGGAAGAGAACTGAATGAGGACAGAGACAGCGGCATAGCACGTTCTGCATCTCTGAGCAGCTTGTTCATCACCCCATTCCCCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046835.14 ENSMUST00000143650.2 |
||
| CDS GCA 90 bp | GTCCTGCAGAGTATTGAGACTCCCACAGATACTACTGCCAGTCCGTaGGGTGAAAACTTTGCTAAGCATAAGCTGTGGAGGCGAGCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: VLQSIETPTDTTASP*GENFAKHKLWRRAD Trigger: ATCCGCTCGCCTCCACAGCTTATGCTTAGCAAAGTTTTCACCGCACGGACTGGCAGTAGTATCTGTGGGAGTCTCAATACTCTGCAGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046835.14 ENSMUST00000143650.2 |
||
| CDS CCA 90 bp | CCCTCGTCTTTCACAGTCTTGATATACGATCAGTCGAATCTGACTTaGGTCAAATTCTGGCAAGGGCCAACTGAACGCGCAGTCCGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: PSSFTVLIYDQSNLT*VKFWQGPTERAVRV Trigger: GACCCGGACTGCGCGTTCAGTTGGCCCTTGCCAGAATTTGACCCAAGTCAGATTCGACTGATCGTATATCAAGACTGTGAAAGACGAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS TCA 90 bp | AGGTCACTGGATTCAATCCCAAGAACCACTCCTAGCTCCTTGACATaGACACGCATCTGTCCCCTCAGGTACTCAGACAGCATTTTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RSLDSIPRTTPSSLT*TRICPLRYSDSILL Trigger: GAGCAAAATGCTGTCTGAGTACCTGAGGGGACAGATGCGTGTTCATGTCAAGGAGCTAGGAGTGGTTCTTGGGATTGAATCCAGTGACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS TCA 90 bp | GAGGAAGGTCACTGGATTCAATCCCAAGAACCACTCCTAGCTCCTTaGCATGAACACGCATCTGTCCCCTCAGGTACTCAGACAGCATTT | + |
|
Preference number: 5 (lower is better) Translates to: EEGHWIQSQEPLLAP*HEHASVPSGTQTAF Trigger: AAATGCTGTCTGAGTACCTGAGGGGACAGATGCGTGTTCATGTCAAGGAGCTAGGAGTGGTTCTTGGGATTGAATCCAGTGACCTTCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS TCA 90 bp | AACTATCTCCTCCTGGCTTCAGCTGGCAGCACTTCCCAAAGACCTTaGCTTGAGCATCATTACAGAGCTTCGATACTGATGTGTCCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: NYLLLASAGSTSQRP*LEHHYRASILMCPH Trigger: ATGAGGACACATCAGTATCGAAGCTCTGTAATGATGCTCAAGTCAAGGTCTTTGGGAAGTGCTGCCAGCTGAAGCCAGGAGGAGATAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046835.14 ENSMUST00000143650.2 |
||
| CDS TCA 90 bp | TTCCTTCATGAAACGATGGCAAAGCTGGTTCTTCTCTGGAGTCCCTaGCATCATTGTAAGCCAGACAGGTTCCCCAATTCTTGGCATTGT | + |
|
Preference number: 5 (lower is better) Translates to: FLHETMAKLVLLWSP*HHCKPDRFPNSWHC Trigger: ACAATGCCAAGAATTGGGGAACCTGTCTGGCTTACAATGATGTCAGGGACTCCAGAGAAGAACCAGCTTTGCCATCGTTTCATGAAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046835.14 ENSMUST00000143650.2 |
||
| CDS CCA 90 bp | CAGTCAGGGCATCAAGTATTCGATTGTATGCCAAACTTCTCTGGCTaGCATCAGCTGATCTCCGGCTCATTTTCATTGCCTGTTCTATTG | + |
|
Preference number: 5 (lower is better) Translates to: QSGHQVFDCMPNFSG*HQLISGSFSLPVLL Trigger: CAATAGAACAGGCAATGAAAATGAGCCGGAGATCAGCTGATGCCAGCCAGAGAAGTTTGGCATACAATCGAATACTTGATGCCCTGACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046835.14 ENSMUST00000143650.2 |
||
| CDS CCA 90 bp | AACTCAGTCAGGGCATCAAGTATTCGATTGTATGCCAAACTTCTCTaGCTGGCATCAGCTGATCTCCGGCTCATTTTCATTGCCTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: NSVRASSIRLYAKLL*LASADLRLIFIACS Trigger: AGAACAGGCAATGAAAATGAGCCGGAGATCAGCTGATGCCAGCCAGAGAAGTTTGGCATACAATCGAATACTTGATGCCCTGACTGAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046835.14 ENSMUST00000143650.2 |
||
| CDS CCA 90 bp | CCCTCGTCTTTCACAGTCTTGATATACGATCAGTCGAATCTGACTTaGGTCAAATTCTGGCAAGGGCCAACTCAAAGGACAAGGATGCAT | + |
|
Preference number: 5 (lower is better) Translates to: PSSFTVLIYDQSNLT*VKFWQGPTQRTRMH Trigger: ATGCATCCTTGTCCTTTGAGTTGGCCCTTGCCAGAATTTGACCCAAGTCAGATTCGACTGATCGTATATCAAGACTGTGAAAGACGAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143650.2 |
||
| CDS TCA 90 bp | GAACACGCATCTGTCCCCTCAGGTACTCAGACAGCATTTTGCTCTTaGAGTATAACTCCTGTAACCGGTCTTCAAGGTGCATTACACAAA | + |
|
Preference number: 5 (lower is better) Translates to: EHASVPSGTQTAFCS*SITPVTGLQGALHK Trigger: TTTGTGTAATGCACCTTGAAGACCGGTTACAGGAGTTATACTTCAAGAGCAAAATGCTGTCTGAGTACCTGAGGGGACAGATGCGTGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS CCA 90 bp | ATGAGCAGTAGCCACCCAGCAAAGATCTTCCAAAGTTGGCAATGTTaGGCTGAACAGCACTCACTTCAATCAATTTTGACCCAGGAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: MSSSHPAKIFQSWQC*AEQHSLQSILTQEK Trigger: CTTTTCCTGGGTCAAAATTGATTGAAGTGAGTGCTGTTCAGCCCAACATTGCCAACTTTGGAAGATCTTTGCTGGGTGGCTACTGCTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS GCA 90 bp | CTGGAGGTTTCTTTTCAACAACTATTCCTGTGGGTCTCATTGCTGTaGCTGTGTGATTATCTGAATCCAGCAATTCCTTATTCTGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LEVSFQQLFLWVSLL*LCDYLNPAIPYSAR Trigger: CCTGGCAGAATAAGGAATTGCTGGATTCAGATAATCACACAGGCACAGCAATGAGACCCACAGGAATAGTTGTTGAAAAGAAACCTCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS CCA 90 bp | GAACATAAGATGAGCAGTAGCCACCCAGCAAAGATCTTCCAAAGTTaGCAATGTTGGGCTGAACAGCACTCACTTCAATCAATTTTGACC | + |
|
Preference number: 5 (lower is better) Translates to: EHKMSSSHPAKIFQS*QCWAEQHSLQSILT Trigger: GGTCAAAATTGATTGAAGTGAGTGCTGTTCAGCCCAACATTGCCAACTTTGGAAGATCTTTGCTGGGTGGCTACTGCTCATCTTATGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
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| CDS-3UTR CAA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATATGGAGAGTGGGTGCTaGCTACCGCAGCCAGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: VGILLNTHKEQDKCNQTHMESGC*LPQPEE Trigger: CTCTTCTGGCTGCGGTAGCAAGCACCCACTCTCCAT...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS TCA 90 bp | AACAACTATTCCTGTGGGTCTCATTGCTGTGCCTGTGTGATTATCTaGATCCAGCAATTCCTTATTCTGCCAGGATTCTTCTCTTGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: NNYSCGSHCCACVII*IQQFLILPGFFSWF Trigger: GAACCAAGAGAAGAATCCTGGCAGAATAAGGAATTGCTGGATTCAGATAATCACACAGGCACAGCAATGAGACCCACAGGAATAGTTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
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| CDS CCA 90 bp | TTTTCCATTAGAAAGGTGAATTCCTTCATGAAACGATGGCAAAGCTaGTTCTTCTCTGGAGTCCCTGACATCATTGTAAGCCAGACAGGT | + |
|
Preference number: 5 (lower is better) Translates to: FSIRKVNSFMKRWQS*FFSGVPDIIVSQTG Trigger: ACCTGTCTGGCTTACAATGATGTCAGGGACTCCAGAGAAGAACCAGCTTTGCCATCGTTTCATGAAGGAATTCACCTTTCTAATGGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046835.14 ENSMUST00000143650.2 |
||
| CDS CCA 90 bp | TTGGAGGCATTTTCCATTAGAAAGGTGAATTCCTTCATGAAACGATaGCAAAGCTGGTTCTTCTCTGGAGTCCCTGACATCATTGTAAGC | + |
|
Preference number: 5 (lower is better) Translates to: LEAFSIRKVNSFMKR*QSWFFSGVPDIIVS Trigger: GCTTACAATGATGTCAGGGACTCCAGAGAAGAACCAGCTTTGCCATCGTTTCATGAAGGAATTCACCTTTCTAATGGAAAATGCCTCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046835.14 ENSMUST00000143650.2 |
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| CDS CCA 90 bp | TGTCTGAGTTACCTCACAGGAAAATGCACTGGGCACATTCTTATCTaGAGGTTTCTTTTCAACAACTATTCCTGTGGGTCTCATTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: CLSYLTGKCTGHILI*RFLFNNYSCGSHCC Trigger: ACAGCAATGAGACCCACAGGAATAGTTGTTGAAAAGAAACCTCCAGATAAGAATGTGCCCAGTGCATTTTCCTGTGAGGTAACTCAGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
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| CDS TCA 90 bp | CTTCTTTTTCCTCACAATTCCTGGATTAGGGCCACAACTTTCATCTaGCAGATTAAAGCTTTCTTCTACAGACCATCTAGGAAACACCCC | + |
|
Preference number: 5 (lower is better) Translates to: LLFPHNSWIRATTFI*QIKAFFYRPSRKHP Trigger: GGGGTGTTTCCTAGATGGTCTGTAGAAGAAAGCTTTAATCTGTCAGATGAAAGTTGTGGCCCTAATCCAGGAATTGTGAGGAAAAAGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046835.14 ENSMUST00000143650.2 |
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| CDS CCA 90 bp | TGGGCACATTCTTATCTGGAGGTTTCTTTTCAACAACTATTCCTGTaGGTCTCATTGCTGTGCCTGTGTGATTATCTGAATCCAGCAATT | + |
|
Preference number: 5 (lower is better) Translates to: WAHSYLEVSFQQLFL*VSLLCLCDYLNPAI Trigger: AATTGCTGGATTCAGATAATCACACAGGCACAGCAATGAGACCCACAGGAATAGTTGTTGAAAAGAAACCTCCAGATAAGAATGTGCCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
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| CDS-3UTR CAA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATTCTCTGGACCAGGTCTaGTCGTTTGCCAACGACTAC | + |
|
Preference number: 5 (lower is better) Translates to: VGILLNTHKEQDKCNQTHSLDQV*SFANDY Trigger: GTAGTCGTTGGCAAACGACAAGACCTGGTCCAGAGA...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
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| CDS TCA 90 bp | CCATTACTAACTGTGCTGCTATCAGCTTTCAATGTATTACTGTCCTaGTTGATGAATTCAAGACTGTCCTGCAGAGTATTGAGACTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: PLLTVLLSAFNVLLS*LMNSRLSCRVLRLP Trigger: TGGGAGTCTCAATACTCTGCAGGACAGTCTTGAATTCATCAATCAGGACAGTAATACATTGAAAGCTGATAGCAGCACAGTTAGTAATGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046835.14 ENSMUST00000143650.2 |
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| CDS TCA 90 bp | TTCTTTTCAACAACTATTCCTGTGGGTCTCATTGCTGTGCCTGTGTaGTTATCTGAATCCAGCAATTCCTTATTCTGCCAGGATTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: FFSTTIPVGLIAVPV*LSESSNSLFCQDSS Trigger: AGAAGAATCCTGGCAGAATAAGGAATTGCTGGATTCAGATAATCACACAGGCACAGCAATGAGACCCACAGGAATAGTTGTTGAAAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS TCA 90 bp | CTCATCATTTCCAATTCCTTGAAGAACAAAGTCAGGAACATAAGATaGGCAGTAGCCACCCAGCAAAGATCTTCCAAAGTTGGCAATGTT | + |
|
Preference number: 5 (lower is better) Translates to: LIISNSLKNKVRNIR*AVATQQRSSKVGNV Trigger: AACATTGCCAACTTTGGAAGATCTTTGCTGGGTGGCTACTGCTCATCTTATGTTCCTGACTTTGTTCTTCAAGGAATTGGAAATGATGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
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| CDS-3UTR CAA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATTTCCTGGCATGTCCATaGGGTTGCTGTGAACTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: VGILLNTHKEQDKCNQTHFLACP*GCCELQ Trigger: TTGCAGTTCACAGCAACCCAATGGACATGCCAGGAA...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
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| CDS-3UTR CAA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATTTCCAAACTTGTTGTTaGGCTACGTCGCCAACGTCG | + |
|
Preference number: 5 (lower is better) Translates to: VGILLNTHKEQDKCNQTHFQTCC*ATSPTS Trigger: CGACGTTGGCGACGTAGCCAAACAACAAGTTTGGAA...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR CAA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATGCCAGGATTCTTCTCTaGGTTCCAAGCATGTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: VGILLNTHKEQDKCNQTHARILL*VPSMSL Trigger: CAGAGACATGCTTGGAACCAAGAGAAGAATCCTGGC...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS GCA 90 bp | TCCAATCAAGAACGTAACCTTTGTCTGAGTTACCTCACAGGAAAATaGACTGGGCACATTCTTATCTGGAGGTTTCTTTTCAACAACTAT | + |
|
Preference number: 5 (lower is better) Translates to: SNQERNLCLSYLTGK*TGHILIWRFLFNNY Trigger: ATAGTTGTTGAAAAGAAACCTCCAGATAAGAATGTGCCCAGTGCATTTTCCTGTGAGGTAACTCAGACAAAGGTTACGTTCTTGATTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR CAA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATTCAGTCGAATCTGACTaGGGTCAAATTCTGGCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: VGILLNTHKEQDKCNQTHSVESD*GQILAR Trigger: CCTTGCCAGAATTTGACCCAAGTCAGATTCGACTGA...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR CAA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATCGTGCGGTGAAAACTTaGCTAAGCATAAGCTGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: VGILLNTHKEQDKCNQTHRAVKT*LSISCG Trigger: TCCACAGCTTATGCTTAGCAAAGTTTTCACCGCACG...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR CAA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATCAACGACTACAGTTCTaGCTAACCGTACAGGAGATC | + |
|
Preference number: 5 (lower is better) Translates to: VGILLNTHKEQDKCNQTHQRLQF*LTVQEI Trigger: GATCTCCTGTACGGTTAGCAAGAACTGTAGTCGTTG...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR CAA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATACCAGGTCTTGTCGTTaGCCAACGACTACAGTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: VGILLNTHKEQDKCNQTHTRSCR*PTTTVL Trigger: AAGAACTGTAGTCGTTGGCAAACGACAAGACCTGGT...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR CAA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATTTCCTGTGGGTCTCATaGCTGTGCCTGTGTGATTAT | + |
|
Preference number: 5 (lower is better) Translates to: VGILLNTHKEQDKCNQTHFLWVS*LCLCDY Trigger: ATAATCACACAGGCACAGCAATGAGACCCACAGGAA...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR CAA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATCTGACTGCTGGCCACTaGAACAGTCCATTTATCCAT | + |
|
Preference number: 5 (lower is better) Translates to: VGILLNTHKEQDKCNQTHLTAGH*NSPFIH Trigger: ATGGATAAATGGACTGTTCAAGTGGCCAGCAGTCAG...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS TCA 90 bp | TCATTAAAATATTCATCAAACAAGCTCATGCTTTCTGGATCTGAATaGCTCCAACAAGGAAGCTCACAGGACTCTCCAGAAACTATGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SLKYSSNKLMLSGSE*LQQGSSQDSPETMF Trigger: GAACATAGTTTCTGGAGAGTCCTGTGAGCTTCCTTGTTGGAGTCATTCAGATCCAGAAAGCATGAGCTTGTTTGATGAATATTTTAATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR CAA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATATCTCTCCAAGCATATaGGCATCAGAAGAACACCGA | + |
|
Preference number: 5 (lower is better) Translates to: VGILLNTHKEQDKCNQTHISPSI*ASEEHR Trigger: TCGGTGTTCTTCTGATGCCAATATGCTTGGAGAGAT...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR CAA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATTATATGGATGAGTCTTaGCCAACATGCCCACACTCT | + |
|
Preference number: 5 (lower is better) Translates to: VGILLNTHKEQDKCNQTHYMDES*PTCPHS Trigger: AGAGTGTGGGCATGTTGGCAAAGACTCATCCATATA...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR CAA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATCACATTCTCTGTATTTaGCCCAAGGACTGGATGACT | + |
|
Preference number: 5 (lower is better) Translates to: VGILLNTHKEQDKCNQTHHILCI*PKDWMT Trigger: AGTCATCCAGTCCTTGGGCAAAATACAGAGAATGTG...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS TCA 90 bp | ATCATCATTAAAATATTCATCAAACAAGCTCATGCTTTCTGGATCTaGATGACTCCAACAAGGAAGCTCACAGGACTCTCCAGAAACTAT | + |
|
Preference number: 5 (lower is better) Translates to: IIIKIFIKQAHAFWI*MTPTRKLTGLSRNY Trigger: ATAGTTTCTGGAGAGTCCTGTGAGCTTCCTTGTTGGAGTCATTCAGATCCAGAAAGCATGAGCTTGTTTGATGAATATTTTAATGATGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR CAA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATTCCGGCTCATTTTCATaGCCTGTTCTATTGCACTTT | + |
|
Preference number: 5 (lower is better) Translates to: VGILLNTHKEQDKCNQTHSGSFS*PVLLHF Trigger: AAAGTGCAATAGAACAGGCAATGAAAATGAGCCGGA...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR CAA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATGCATCAAGTATTCGATaGTATGCCAAACTTCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VGILLNTHKEQDKCNQTHASSIR*YAKLLW Trigger: CCAGAGAAGTTTGGCATACAATCGAATACTTGATGC...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR CAA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATGAGAGCTGGCAAGAATaGATTTTTGGAGGCATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VGILLNTHKEQDKCNQTHESWQE*IFGGIF Trigger: GAAAATGCCTCCAAAAATCAATTCTTGCCAGCTCTC...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
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| CDS-3UTR CAA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATAACAGCATTTTCTTCTaGGCAGTCAGGAGGAGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: VGILLNTHKEQDKCNQTHNSIFF*AVRRRN Trigger: ATTTCTCCTCCTGACTGCCAAGAAGAAAATGCTGTT...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR CAA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATACAACTGTCTCTAACTaGGTGTCAAGGCAAGTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: VGILLNTHKEQDKCNQTHTTVSN*VSRQVL Trigger: AAGAACTTGCCTTGACACCAAGTTAGAGACAGTTGT...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
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| CDS-3UTR CAA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATAGACAGCTTCTGCTATaGGTTCATCTAACACTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: VGILLNTHKEQDKCNQTHRQLLL*VHLTLD Trigger: ATCCAGTGTTAGATGAACCAATAGCAGAAGCTGTCT...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR CAA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATTCGTCTTTCACAGTCTaGATATACGATCAGTCGAAT | + |
|
Preference number: 5 (lower is better) Translates to: VGILLNTHKEQDKCNQTHSSFTV*IYDQSN Trigger: ATTCGACTGATCGTATATCAAGACTGTGAAAGACGA...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR CAA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATCAGGTTCCCCAATTCTaGGCATTGTATAAAGATTAC | + |
|
Preference number: 5 (lower is better) Translates to: VGILLNTHKEQDKCNQTHQVPQF*ALYKDY Trigger: GTAATCTTTATACAATGCCAAGAATTGGGGAACCTG...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR CAA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATTTCCTTAGAGTTGTCTaGAGTATCTTCTCTTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VGILLNTHKEQDKCNQTHFLRVV*SIFSFW Trigger: CCAGAAAGAGAAGATACTCAAGACAACTCTAAGGAA...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR CAA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATTACTCAGACAGCATTTaGCTCTTGAAGTATAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: VGILLNTHKEQDKCNQTHYSDSI*LLKYNS Trigger: GGAGTTATACTTCAAGAGCAAAATGCTGTCTGAGTA...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR CAA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATAAGAGCAAGCTGCTTTaGTTTCTATGCATTGTGATT | + |
|
Preference number: 5 (lower is better) Translates to: VGILLNTHKEQDKCNQTHKSKLL*FLCIVI Trigger: AATCACAATGCATAGAAACAAAAGCAGCTTGCTCTT...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR CAA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATAGTTATTTTACTTTCTaGATGCTTATCAGCCACTCC | + |
|
Preference number: 5 (lower is better) Translates to: VGILLNTHKEQDKCNQTHSYFTF*MLISHS Trigger: GGAGTGGCTGATAAGCATCAAGAAAGTAAAATAACT...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR CAA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATTCACTTCAATCAATTTaGACCCAGGAAAAGGTATCT | + |
|
Preference number: 5 (lower is better) Translates to: VGILLNTHKEQDKCNQTHSLQSI*TQEKVS Trigger: AGATACCTTTTCCTGGGTCAAAATTGATTGAAGTGA...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS-3UTR CAA 90 bp | GTTGGAATTCTCTTGAACACACATAAAGAGCAAGATAAATGTAACCAGACACATATCATTTCCAATTCCTaGAAGAACAAAGTCAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: VGILLNTHKEQDKCNQTHIISNS*KNKVRN Trigger: GTTCCTGACTTTGTTCTTCAAGGAATTGGAAATGAT...ATGTGTCTGGTTACATTTATCTTGCTCTTTATGTGTGTTCAAGAGAATTCCAAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS GCA 72 bp | AAGAAAGAGGCACTCCTGATCAGGCGGAGCGGACCCTaGTCAGAGAAAGCCCGCCTGGGGCTGCAGAACTGT | + |
|
Preference number: 6 (lower is better) Translates to: KKEALLIRRSGP*SEKARLGLQNC Trigger: ACAGTTCTGCAGCCCCAGGCGGGCTTTCTCTGAGCAGGGTCCGCTCCGCCTGATCAGGAGTGCCTCTTTCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046835.14 ENSMUST00000143650.2 |
||
| CDS GCA 72 bp | GGAGGGGAATGGGGTGATGAACAAGCTGCTCAGAGATaGAGAACGTGCTATGCCGCTGTCTCTGTCCTCATT | + |
|
Preference number: 6 (lower is better) Translates to: GGEWGDEQAAQR*RTCYAAVSVLI Trigger: AATGAGGACAGAGACAGCGGCATAGCACGTTCTGCATCTCTGAGCAGCTTGTTCATCACCCCATTCCCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046835.14 ENSMUST00000143650.2 |
||
| CDS CCA 72 bp | TGTCTGAACTCTCTTTATCCCCATGGGGGACAAGAATaGAGAGGGAATTCCTCTGGTCCTGCTGAGGAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: CLNSLYPHGGQE*RGNSSGPAEES Trigger: GCTTTCCTCAGCAGGACCAGAGGAATTCCCTCTCCATTCTTGTCCCCCATGGGGATAAAGAGAGTTCAGACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS TCA 72 bp | CTCCTGGCTTCAGCTGGCAGCACTTCCCAAAGACCTTaGCTTGAGCATCATTACAGAGCTTCGATACTGATG | + |
|
Preference number: 6 (lower is better) Translates to: LLASAGSTSQRP*LEHHYRASILM Trigger: CATCAGTATCGAAGCTCTGTAATGATGCTCAAGTCAAGGTCTTTGGGAAGTGCTGCCAGCTGAAGCCAGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046835.14 ENSMUST00000143650.2 |
||
| CDS CCA 72 bp | GATAGAGCTATCCAAAGAGGAAGAACTATCTCCTCCTaGCTTCAGCTGGCAGCACTTCCCAAAGACCTTGAC | + |
|
Preference number: 6 (lower is better) Translates to: DRAIQRGRTISS*LQLAALPKDLD Trigger: GTCAAGGTCTTTGGGAAGTGCTGCCAGCTGAAGCCAGGAGGAGATAGTTCTTCCTCTTTGGATAGCTCTATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046835.14 ENSMUST00000143650.2 |
||
| CDS CAA 72 bp | CTCTGTCCTCATTCAGTTCTCTTCCTGGCATGTCCATaGGGTTGCTGTGAACTGCAAAGAAAGAGGCACTCC | + |
|
Preference number: 6 (lower is better) Translates to: LCPHSVLFLACP*GCCELQRKRHS Trigger: GGAGTGCCTCTTTCTTTGCAGTTCACAGCAACCCAATGGACATGCCAGGAAGAGAACTGAATGAGGACAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046835.14 ENSMUST00000143650.2 |
||
| CDS TCA 72 bp | GAAACGATGGCAAAGCTGGTTCTTCTCTGGAGTCCCTaGCATCATTGTAAGCCAGACAGGTTCCCCAATTCT | + |
|
Preference number: 6 (lower is better) Translates to: ETMAKLVLLWSP*HHCKPDRFPNS Trigger: AGAATTGGGGAACCTGTCTGGCTTACAATGATGTCAGGGACTCCAGAGAAGAACCAGCTTTGCCATCGTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046835.14 ENSMUST00000143650.2 |
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| CDS CAA 90 bp | TCCCTCGTCTTTCACAGTCTTGATATACGATCAGTCGAATCTGACTaGGGTCAAATTCTGGCAAGGGCCAACTCAAAGGACAAGGATGCA | + |
|
Preference number: 6 (lower is better) Translates to: SLVFHSLDIRSVESD*GQILARANSKDKDA Trigger: TGCATCCTTGTCCTTTGAGTTGGCCCTTGCCAGAATTTGACCCAAGTCAGATTCGACTGATCGTATATCAAGACTGTGAAAGACGAGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143650.2 |
||
| CDS GCA 72 bp | GAAAATAAAGCAGTCTCTGGACCAGGTCTTGTCGTTTaGCAACGACTACAGTTCTTGCTAACCGTACAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: ENKAVSGPGLVV*QRLQFLLTVQE Trigger: CTCCTGTACGGTTAGCAAGAACTGTAGTCGTTGGCAAACGACAAGACCTGGTCCAGAGACTGCTTTATTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046835.14 ENSMUST00000143650.2 |
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| CDS CCA 72 bp | TTCACAGTCTTGATATACGATCAGTCGAATCTGACTTaGGTCAAATTCTGGCAAGGGCCAACTGAACGCGCA | + |
|
Preference number: 6 (lower is better) Translates to: FTVLIYDQSNLT*VKFWQGPTERA Trigger: TGCGCGTTCAGTTGGCCCTTGCCAGAATTTGACCCAAGTCAGATTCGACTGATCGTATATCAAGACTGTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS CCA 72 bp | ATGAGCAGTAGCCACCCAGCAAAGATCTTCCAAAGTTaGCAATGTTGGGCTGAACAGCACTCACTTCAATCA | + |
|
Preference number: 6 (lower is better) Translates to: MSSSHPAKIFQS*QCWAEQHSLQS Trigger: TGATTGAAGTGAGTGCTGTTCAGCCCAACATTGCCAACTTTGGAAGATCTTTGCTGGGTGGCTACTGCTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS CAA 72 bp | TCTCTTGGTTCCAAGCATGTCTCTGACAACACACATTaGTCGGCTGGAGCAGATCCTGTACAAACAACTGTC | + |
|
Preference number: 6 (lower is better) Translates to: SLGSKHVSDNTH*SAGADPVQTTV Trigger: GACAGTTGTTTGTACAGGATCTGCTCCAGCCGACAAATGTGTGTTGTCAGAGACATGCTTGGAACCAAGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
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| CDS CAA 72 bp | ACACGCATCTGTCCCCTCAGGTACTCAGACAGCATTTaGCTCTTGAAGTATAACTCCTGTAACCGGTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: TRICPLRYSDSI*LLKYNSCNRSS Trigger: TGAAGACCGGTTACAGGAGTTATACTTCAAGAGCAAAATGCTGTCTGAGTACCTGAGGGGACAGATGCGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
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| CDS CAA 90 bp | TTACAAATTGTTGTTCTGAACTCAGTCAGGGCATCAAGTATTCGATaGTATGCCAAACTTCTCTGGCTGGCATCAGCTGATCTCCGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LQIVVLNSVRASSIR*YAKLLWLASADLRL Trigger: GAGCCGGAGATCAGCTGATGCCAGCCAGAGAAGTTTGGCATACAATCGAATACTTGATGCCCTGACTGAGTTCAGAACAACAATTTGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046835.14 ENSMUST00000143650.2 |
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| CDS CAA 90 bp | CAGGATTCTTCTCTTGGTTCCAAGCATGTCTCTGACAACACACATTaGTCGGCTGGAGCAGATCCTGTACAAACAACTGTCTCTAACTTG | + |
|
Preference number: 6 (lower is better) Translates to: QDSSLGSKHVSDNTH*SAGADPVQTTVSNL Trigger: CAAGTTAGAGACAGTTGTTTGTACAGGATCTGCTCCAGCCGACAAATGTGTGTTGTCAGAGACATGCTTGGAACCAAGAGAAGAATCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
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| CDS CCA 72 bp | CATCAAGTATTCGATTGTATGCCAAACTTCTCTGGCTaGCATCAGCTGATCTCCGGCTCATTTTCATTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: HQVFDCMPNFSG*HQLISGSFSLP Trigger: AGGCAATGAAAATGAGCCGGAGATCAGCTGATGCCAGCCAGAGAAGTTTGGCATACAATCGAATACTTGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046835.14 ENSMUST00000143650.2 |
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| CDS CCA 72 bp | AGGGCATCAAGTATTCGATTGTATGCCAAACTTCTCTaGCTGGCATCAGCTGATCTCCGGCTCATTTTCATT | + |
|
Preference number: 6 (lower is better) Translates to: RASSIRLYAKLL*LASADLRLIFI Trigger: AATGAAAATGAGCCGGAGATCAGCTGATGCCAGCCAGAGAAGTTTGGCATACAATCGAATACTTGATGCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046835.14 ENSMUST00000143650.2 |
||
| CDS CCA 72 bp | AGCCACCCAGCAAAGATCTTCCAAAGTTGGCAATGTTaGGCTGAACAGCACTCACTTCAATCAATTTTGACC | + |
|
Preference number: 6 (lower is better) Translates to: SHPAKIFQSWQC*AEQHSLQSILT Trigger: GGTCAAAATTGATTGAAGTGAGTGCTGTTCAGCCCAACATTGCCAACTTTGGAAGATCTTTGCTGGGTGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
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| CDS CAA 72 bp | GTTGTTCTGAACTCAGTCAGGGCATCAAGTATTCGATaGTATGCCAAACTTCTCTGGCTGGCATCAGCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: VVLNSVRASSIR*YAKLLWLASAD Trigger: ATCAGCTGATGCCAGCCAGAGAAGTTTGGCATACAATCGAATACTTGATGCCCTGACTGAGTTCAGAACAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046835.14 ENSMUST00000143650.2 |
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| CDS CAA 90 bp | GATTATCTGAATCCAGCAATTCCTTATTCTGCCAGGATTCTTCTCTaGGTTCCAAGCATGTCTCTGACAACACACATTTGTCGGCTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: DYLNPAIPYSARILL*VPSMSLTTHICRLE Trigger: CTCCAGCCGACAAATGTGTGTTGTCAGAGACATGCTTGGAACCAAGAGAAGAATCCTGGCAGAATAAGGAATTGCTGGATTCAGATAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
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| CDS TCA 72 bp | ACAACTATTCCTGTGGGTCTCATTGCTGTGCCTGTGTaGTTATCTGAATCCAGCAATTCCTTATTCTGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: TTIPVGLIAVPV*LSESSNSLFCQ Trigger: CTGGCAGAATAAGGAATTGCTGGATTCAGATAATCACACAGGCACAGCAATGAGACCCACAGGAATAGTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
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| CDS CCA 72 bp | AGAAAGGTGAATTCCTTCATGAAACGATGGCAAAGCTaGTTCTTCTCTGGAGTCCCTGACATCATTGTAAGC | + |
|
Preference number: 6 (lower is better) Translates to: RKVNSFMKRWQS*FFSGVPDIIVS Trigger: GCTTACAATGATGTCAGGGACTCCAGAGAAGAACCAGCTTTGCCATCGTTTCATGAAGGAATTCACCTTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046835.14 ENSMUST00000143650.2 |
||
| CDS CCA 72 bp | TTCACAGTCTTGATATACGATCAGTCGAATCTGACTTaGGTCAAATTCTGGCAAGGGCCAACTCAAAGGACA | + |
|
Preference number: 6 (lower is better) Translates to: FTVLIYDQSNLT*VKFWQGPTQRT Trigger: TGTCCTTTGAGTTGGCCCTTGCCAGAATTTGACCCAAGTCAGATTCGACTGATCGTATATCAAGACTGTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143650.2 |
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| CDS CAA 72 bp | TTTCACAGTCTTGATATACGATCAGTCGAATCTGACTaGGGTCAAATTCTGGCAAGGGCCAACTCAAAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: FHSLDIRSVESD*GQILARANSKD Trigger: GTCCTTTGAGTTGGCCCTTGCCAGAATTTGACCCAAGTCAGATTCGACTGATCGTATATCAAGACTGTGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143650.2 |
||
| CDS TCA 72 bp | GACATAGAATCTCCAATCAAGAACGTAACCTTTGTCTaGGTTACCTCACAGGAAAATGCACTGGGCACATTC | + |
|
Preference number: 6 (lower is better) Translates to: DIESPIKNVTFV*VTSQENALGTF Trigger: GAATGTGCCCAGTGCATTTTCCTGTGAGGTAACTCAGACAAAGGTTACGTTCTTGATTGGAGATTCTATGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS TCA 72 bp | TATTCATCAAACAAGCTCATGCTTTCTGGATCTGAATaGCTCCAACAAGGAAGCTCACAGGACTCTCCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: YSSNKLMLSGSE*LQQGSSQDSPE Trigger: TTCTGGAGAGTCCTGTGAGCTTCCTTGTTGGAGTCATTCAGATCCAGAAAGCATGAGCTTGTTTGATGAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS GCA 72 bp | GACTGTTGGAACCCAGGCAAGATGATTGGTCAAAACTaGAGTAATGAGAGCTGGCAAGAATTGATTTTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: DCWNPGKMIGQN*SNESWQELIFG Trigger: TCCAAAAATCAATTCTTGCCAGCTCTCATTACTGCAGTTTTGACCAATCATCTTGCCTGGGTTCCAACAGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046835.14 ENSMUST00000143650.2 |
||
| CDS CCA 72 bp | TCAGAAGAACACCGAGAACCCTGGTATTTGGGACACTaGTCTTTTCCATCAGAAGATAAAGTGATAGAGCTA | + |
|
Preference number: 6 (lower is better) Translates to: SEEHREPWYLGH*SFPSEDKVIEL Trigger: TAGCTCTATCACTTTATCTTCTGATGGAAAAGACCAGTGTCCCAAATACCAGGGTTCTCGGTGTTCTTCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046835.14 ENSMUST00000143650.2 |
||
| CDS CCA 72 bp | TTTTCCATTAGAAAGGTGAATTCCTTCATGAAACGATaGCAAAGCTGGTTCTTCTCTGGAGTCCCTGACATC | + |
|
Preference number: 6 (lower is better) Translates to: FSIRKVNSFMKR*QSWFFSGVPDI Trigger: GATGTCAGGGACTCCAGAGAAGAACCAGCTTTGCCATCGTTTCATGAAGGAATTCACCTTTCTAATGGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046835.14 ENSMUST00000143650.2 |
||
| CDS TCA 72 bp | CTTAGAGTTGTCTTGAGTATCTTCTCTTTCTGGTTGTaGCACATTCTCTGTATTTTGCCCAAGGACTGGATG | + |
|
Preference number: 6 (lower is better) Translates to: LRVVLSIFSFWL*HILCILPKDWM Trigger: CATCCAGTCCTTGGGCAAAATACAGAGAATGTGTCACAACCAGAAAGAGAAGATACTCAAGACAACTCTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046835.14 ENSMUST00000143650.2 |
||
| CDS TCA 72 bp | AAAATATTCATCAAACAAGCTCATGCTTTCTGGATCTaGATGACTCCAACAAGGAAGCTCACAGGACTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: KIFIKQAHAFWI*MTPTRKLTGLS Trigger: GGAGAGTCCTGTGAGCTTCCTTGTTGGAGTCATTCAGATCCAGAAAGCATGAGCTTGTTTGATGAATATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS CAA 72 bp | AATCCAGCAATTCCTTATTCTGCCAGGATTCTTCTCTaGGTTCCAAGCATGTCTCTGACAACACACATTTGT | + |
|
Preference number: 6 (lower is better) Translates to: NPAIPYSARILL*VPSMSLTTHIC Trigger: ACAAATGTGTGTTGTCAGAGACATGCTTGGAACCAAGAGAAGAATCCTGGCAGAATAAGGAATTGCTGGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
||
| CDS CAA 72 bp | GAGGTTTCTTTTCAACAACTATTCCTGTGGGTCTCATaGCTGTGCCTGTGTGATTATCTGAATCCAGCAATT | + |
|
Preference number: 6 (lower is better) Translates to: EVSFQQLFLWVS*LCLCDYLNPAI Trigger: AATTGCTGGATTCAGATAATCACACAGGCACAGCAATGAGACCCACAGGAATAGTTGTTGAAAAGAAACCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
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| CDS CAA 90 bp | TCTTATCTGGAGGTTTCTTTTCAACAACTATTCCTGTGGGTCTCATaGCTGTGCCTGTGTGATTATCTGAATCCAGCAATTCCTTATTCT | + |
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Preference number: 6 (lower is better) Translates to: SYLEVSFQQLFLWVS*LCLCDYLNPAIPYS Trigger: AGAATAAGGAATTGCTGGATTCAGATAATCACACAGGCACAGCAATGAGACCCACAGGAATAGTTGTTGAAAAGAAACCTCCAGATAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046835.14 |
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| CDS CAA 72 bp | GTCAAACAATACATTTCTCCCTCGTCTTTCACAGTCTaGATATACGATCAGTCGAATCTGACTTGGGTCAAA | + |
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Preference number: 6 (lower is better) Translates to: VKQYISPSSFTV*IYDQSNLTWVK Trigger: TTTGACCCAAGTCAGATTCGACTGATCGTATATCAAGACTGTGAAAGACGAGGGAGAAATGTATTGTTTGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046835.14 ENSMUST00000143650.2 |
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