Pregenerated sensors for FNDC8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018844Ensembl transcript IDs: ENSMUST00000018988.6
Found 119 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGTCCATCAAGCCCCTTCCTTGCACTGGATAGCAGGAGCCCAGGCTaGTCAGGAAGCTGCCCTCTGCTGCATTGCAATAAGGGAGAGGCC | + |
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Preference number: 1 (lower is better) Translates to: GPSSPFLALDSRSPG*SGSCPLLHCNKGEA Trigger: GGCCTCTCCCTTATTGCAATGCAGCAGAGGGCAGCTTCCTGATCAGCCTGGGCTCCTGCTATCCAGTGCAAGGAAGGGGCTTGATGGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| 3UTR CCA 90 bp | TCAGTCAGGGACTCTGAGAAGGTCCATCAAGCCCCTTCCTTGCACTaGATAGCAGGAGCCCAGGCTGATCAGGAAGCTGCCCTCTGCTGC | + |
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Preference number: 1 (lower is better) Translates to: SVRDSEKVHQAPSLH*IAGAQADQEAALCC Trigger: GCAGCAGAGGGCAGCTTCCTGATCAGCCTGGGCTCCTGCTATCCAGTGCAAGGAAGGGGCTTGATGGACCTTCTCAGAGTCCCTGACTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| 3UTR TCA 90 bp | ACCCAGCCGGCCTTATTCTCATTCTATCTGCTGGACTCCTCGTTCTaGCAAGGCCTATGCTCTGGCCCAGCTGAGGCTTGTGGCAACAGG | + |
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Preference number: 1 (lower is better) Translates to: TQPALFSFYLLDSSF*QGLCSGPAEACGNR Trigger: CCTGTTGCCACAAGCCTCAGCTGGGCCAGAGCATAGGCCTTGTCAGAACGAGGAGTCCAGCAGATAGAATGAGAATAAGGCCGGCTGGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| 3UTR TCA 90 bp | GAACACACACACACACACACACACACCCCGCTCAGTCAGGGACTCTaGGAAGGTCCATCAAGCCCCTTCCTTGCACTGGATAGCAGGAGC | + |
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Preference number: 1 (lower is better) Translates to: EHTHTHTHTPLSQGL*EGPSSPFLALDSRS Trigger: GCTCCTGCTATCCAGTGCAAGGAAGGGGCTTGATGGACCTTCTCAGAGTCCCTGACTGAGCGGGGTGTGTGTGTGTGTGTGTGTGTGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| 3UTR CCA 90 bp | AGTGTCAGCCTGTCACCCAGCCGGCCTTATTCTCATTCTATCTGCTaGACTCCTCGTTCTGACAAGGCCTATGCTCTGGCCCAGCTGAGG | + |
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Preference number: 1 (lower is better) Translates to: SVSLSPSRPYSHSIC*TPRSDKAYALAQLR Trigger: CCTCAGCTGGGCCAGAGCATAGGCCTTGTCAGAACGAGGAGTCCAGCAGATAGAATGAGAATAAGGCCGGCTGGGTGACAGGCTGACACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| 3UTR GCA 90 bp | CACTGGATAGCAGGAGCCCAGGCTGATCAGGAAGCTGCCCTCTGCTaGATTGCAATAAGGGAGAGGCCAGTGGCCAGTGGAAAGATTAAG | + |
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Preference number: 1 (lower is better) Translates to: HWIAGAQADQEAALC*IAIRERPVASGKIK Trigger: CTTAATCTTTCCACTGGCCACTGGCCTCTCCCTTATTGCAATGCAGCAGAGGGCAGCTTCCTGATCAGCCTGGGCTCCTGCTATCCAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| 3UTR GCA 90 bp | TTGCACTGGATAGCAGGAGCCCAGGCTGATCAGGAAGCTGCCCTCTaGTGCATTGCAATAAGGGAGAGGCCAGTGGCCAGTGGAAAGATT | + |
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Preference number: 1 (lower is better) Translates to: LHWIAGAQADQEAAL*CIAIRERPVASGKI Trigger: AATCTTTCCACTGGCCACTGGCCTCTCCCTTATTGCAATGCAGCAGAGGGCAGCTTCCTGATCAGCCTGGGCTCCTGCTATCCAGTGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| 3UTR GCA 90 bp | CTGGCCCAGCTGAGGCTTGTGGCAACAGGAAGTAGAGTTTCAGGGTaGTGTATGGGCCTTCAGTTCTTTAATGGGGAACCTGGAACCAGC | + |
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Preference number: 1 (lower is better) Translates to: LAQLRLVATGSRVSG*CMGLQFFNGEPGTS Trigger: GCTGGTTCCAGGTTCCCCATTAAAGAACTGAAGGCCCATACAGCACCCTGAAACTCTACTTCCTGTTGCCACAAGCCTCAGCTGGGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| 3UTR CCA 90 bp | CGCCCCAGGGTTGAGGTTCCGATACATCTGCCCCAGGCCCTAGGCTaGTGGATAACTAGTGGTTCTTTGACTTGGTACTTGGTAGTACAG | + |
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Preference number: 1 (lower is better) Translates to: RPRVEVPIHLPQALG*WITSGSLTWYLVVQ Trigger: CTGTACTACCAAGTACCAAGTCAAAGAACCACTAGTTATCCACCAGCCTAGGGCCTGGGGCAGATGTATCGGAACCTCAACCCTGGGGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| 3UTR CCA 90 bp | GGGAGAGGCCAGTGGCCAGTGGAAAGATTAAGGCTGTGCTGTCTATaGTCATCTTGCCACGTGCCCATTGGCACAAGCCAAAAAGTACTG | + |
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Preference number: 1 (lower is better) Translates to: GRGQWPVERLRLCCL*SSCHVPIGTSQKVL Trigger: CAGTACTTTTTGGCTTGTGCCAATGGGCACGTGGCAAGATGACCATAGACAGCACAGCCTTAATCTTTCCACTGGCCACTGGCCTCTCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| 3UTR CCA 90 bp | GGTTCTTTGACTTGGTACTTGGTAGTACAGTACATCTCACGGTTCTaGTTCCTGAGGACCCAGAGCCAAGGCAGACAGTGGGCAAGGGAT | + |
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Preference number: 1 (lower is better) Translates to: GSLTWYLVVQYISRF*FLRTQSQGRQWARD Trigger: ATCCCTTGCCCACTGTCTGCCTTGGCTCTGGGTCCTCAGGAACCAGAACCGTGAGATGTACTGTACTACCAAGTACCAAGTCAAAGAACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| 3UTR CCA 90 bp | CTGCCCCAGGCCCTAGGCTGGTGGATAACTAGTGGTTCTTTGACTTaGTACTTGGTAGTACAGTACATCTCACGGTTCTGGTTCCTGAGG | + |
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Preference number: 1 (lower is better) Translates to: LPQALGWWITSGSLT*YLVVQYISRFWFLR Trigger: CCTCAGGAACCAGAACCGTGAGATGTACTGTACTACCAAGTACCAAGTCAAAGAACCACTAGTTATCCACCAGCCTAGGGCCTGGGGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| 3UTR CCA 90 bp | CCCAGGGTTGAGGTTCCGATACATCTGCCCCAGGCCCTAGGCTGGTaGATAACTAGTGGTTCTTTGACTTGGTACTTGGTAGTACAGTAC | + |
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Preference number: 1 (lower is better) Translates to: PRVEVPIHLPQALGW*ITSGSLTWYLVVQY Trigger: GTACTGTACTACCAAGTACCAAGTCAAAGAACCACTAGTTATCCACCAGCCTAGGGCCTGGGGCAGATGTATCGGAACCTCAACCCTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| 3UTR-3UTR TCA 90 bp | CCTTCCTTGCACTGGATAGCAGGAGCCCAGGCTGATCAGGAAGCTGCCCTCTGCGCAGCTGTTGGGCAGTaGCTGAGCCTGGGCCAGCTC | + |
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Preference number: 2 (lower is better) Translates to: PSLHWIAGAQADQEAALCAAVGQ*LSLGQL Trigger: GAGCTGGCCCAGGCTCAGTCACTGCCCAACAGCTGC...GCAGAGGGCAGCTTCCTGATCAGCCTGGGCTCCTGCTATCCAGTGCAAGGAAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| 3UTR CAA 90 bp | CCCCGCTCAGTCAGGGACTCTGAGAAGGTCCATCAAGCCCCTTCCTaGCACTGGATAGCAGGAGCCCAGGCTGATCAGGAAGCTGCCCTC | + |
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Preference number: 2 (lower is better) Translates to: PRSVRDSEKVHQAPS*HWIAGAQADQEAAL Trigger: GAGGGCAGCTTCCTGATCAGCCTGGGCTCCTGCTATCCAGTGCAAGGAAGGGGCTTGATGGACCTTCTCAGAGTCCCTGACTGAGCGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| 3UTR-3UTR TCA 90 bp | TGTCAGCCTGTCACCCAGCCGGCCTTATTCTCATTCTATCTGCTGGACTCCTCGGCTCCTGTCTATCCATaGCCCCGCCCCAGGGTTGAG | + |
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Preference number: 2 (lower is better) Translates to: CQPVTQPALFSFYLLDSSAPVYP*PRPRVE Trigger: CTCAACCCTGGGGCGGGGTCATGGATAGACAGGAGC...CGAGGAGTCCAGCAGATAGAATGAGAATAAGGCCGGCTGGGTGACAGGCTGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| 3UTR-3UTR GCA 90 bp | GGTGCTGTATGGGCCTTCAGTTCTTTAATGGGGAACCTGGAACCAGCCCAGGTCAGGGAAGAAGGAGGGTaGCTAGCAGCTGTTGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: GAVWAFSSLMGNLEPAQVREEGG*LAAVGQ Trigger: CTGCCCAACAGCTGCTAGGCACCCTCCTTCTTCCCT...GACCTGGGCTGGTTCCAGGTTCCCCATTAAAGAACTGAAGGCCCATACAGCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| 3UTR-3UTR CCA 90 bp | CTGTCACCCAGCCGGCCTTATTCTCATTCTATCTGCTGGACTCCTCGTTCTGACGTGCCTAGCAGCTGTTaGGCAGTGACTGAGCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: LSPSRPYSHSICWTPRSDVPSSC*AVTEPG Trigger: CCCAGGCTCAGTCACTGCCCAACAGCTGCTAGGCAC...GTCAGAACGAGGAGTCCAGCAGATAGAATGAGAATAAGGCCGGCTGGGTGACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| 3UTR-3UTR CCA 90 bp | CACTCGTGTGAGGCACACGTGTGTCACAGTGATCCTGTACCCGTGCCCAAAACGTACATCTCACGGTTCTaGTTCCTGAGGACCCAGAGC | + |
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Preference number: 2 (lower is better) Translates to: HSCEAHVCHSDPVPVPKTYISRF*FLRTQS Trigger: GCTCTGGGTCCTCAGGAACCAGAACCGTGAGATGTA...CGTTTTGGGCACGGGTACAGGATCACTGTGACACACGTGTGCCTCACACGAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| 3UTR-3UTR CCA 90 bp | AGTGTCAGCCTGTCACCCAGCCGGCCTTATTCTCATTCTATCTGCTGGACTCCTAGCCAAGGCAGACAGTaGGCAAGGGATAGCCTCAAC | + |
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Preference number: 2 (lower is better) Translates to: SVSLSPSRPYSHSICWTPSQGRQ*ARDSLN Trigger: GTTGAGGCTATCCCTTGCCCACTGTCTGCCTTGGCT...AGGAGTCCAGCAGATAGAATGAGAATAAGGCCGGCTGGGTGACAGGCTGACACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| 3UTR-3UTR GCA 90 bp | GAGAAGGTCCATCAAGCCCCTTCCTTGCACTGGATAGCAGGAGCCCAGGCTGATAGCCAAAAAGTACTGTaGTGTAAAGTTAGCTGGGGC | + |
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Preference number: 2 (lower is better) Translates to: EKVHQAPSLHWIAGAQADSQKVL*CKVSWG Trigger: GCCCCAGCTAACTTTACAGCACAGTACTTTTTGGCT...ATCAGCCTGGGCTCCTGCTATCCAGTGCAAGGAAGGGGCTTGATGGACCTTCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| 3UTR GCA 72 bp | GCAGGAGCCCAGGCTGATCAGGAAGCTGCCCTCTGCTaGATTGCAATAAGGGAGAGGCCAGTGGCCAGTGGA | + |
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Preference number: 3 (lower is better) Translates to: AGAQADQEAALC*IAIRERPVASG Trigger: TCCACTGGCCACTGGCCTCTCCCTTATTGCAATGCAGCAGAGGGCAGCTTCCTGATCAGCCTGGGCTCCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| 3UTR CCA 72 bp | CTGAGCCTGGGCCAGCTCAAGATGTCACTAGGTGAATaGGGCTCCTGTCTATCCATGACCCCGCCCCAGGGT | + |
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Preference number: 3 (lower is better) Translates to: LSLGQLKMSLGE*GSCLSMTPPQG Trigger: ACCCTGGGGCGGGGTCATGGATAGACAGGAGCCCCATTCACCTAGTGACATCTTGAGCTGGCCCAGGCTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| 3UTR CCA 72 bp | CCAGGTCAGGGAAGAAGGAGGGTGCCTAGCAGCTGTTaGGCAGTGACTGAGCCTGGGCCAGCTCAAGATGTC | + |
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Preference number: 3 (lower is better) Translates to: PGQGRRRVPSSC*AVTEPGPAQDV Trigger: GACATCTTGAGCTGGCCCAGGCTCAGTCACTGCCCAACAGCTGCTAGGCACCCTCCTTCTTCCCTGACCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| 3UTR-3UTR CAA 90 bp | CTGTCACCCAGCCGGCCTTATTCTCATTCTATCTGCTGGACTCCTCGTTCTGACGACCCCGCCCCAGGGTaGAGGTTCCGATACATCTGC | + |
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Preference number: 3 (lower is better) Translates to: LSPSRPYSHSICWTPRSDDPAPG*RFRYIC Trigger: GCAGATGTATCGGAACCTCAACCCTGGGGCGGGGTC...GTCAGAACGAGGAGTCCAGCAGATAGAATGAGAATAAGGCCGGCTGGGTGACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| 3UTR TCA 72 bp | AGGGAAGAAGGAGGGTGCCTAGCAGCTGTTGGGCAGTaGCTGAGCCTGGGCCAGCTCAAGATGTCACTAGGT | + |
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Preference number: 3 (lower is better) Translates to: REEGGCLAAVGQ*LSLGQLKMSLG Trigger: ACCTAGTGACATCTTGAGCTGGCCCAGGCTCAGTCACTGCCCAACAGCTGCTAGGCACCCTCCTTCTTCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| 3UTR GCA 72 bp | ATAGCAGGAGCCCAGGCTGATCAGGAAGCTGCCCTCTaGTGCATTGCAATAAGGGAGAGGCCAGTGGCCAGT | + |
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Preference number: 3 (lower is better) Translates to: IAGAQADQEAAL*CIAIRERPVAS Trigger: ACTGGCCACTGGCCTCTCCCTTATTGCAATGCAGCAGAGGGCAGCTTCCTGATCAGCCTGGGCTCCTGCTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| 3UTR TCA 72 bp | CACACACACACACACACCCCGCTCAGTCAGGGACTCTaGGAAGGTCCATCAAGCCCCTTCCTTGCACTGGAT | + |
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Preference number: 3 (lower is better) Translates to: HTHTHTPLSQGL*EGPSSPFLALD Trigger: ATCCAGTGCAAGGAAGGGGCTTGATGGACCTTCTCAGAGTCCCTGACTGAGCGGGGTGTGTGTGTGTGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| 3UTR GCA 72 bp | GGGAGAGGCCAGTGGCCAGTGGAAAGATTAAGGCTGTaGTGTCTATGGTCATCTTGCCACGTGCCCATTGGC | + |
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Preference number: 3 (lower is better) Translates to: GRGQWPVERLRL*CLWSSCHVPIG Trigger: GCCAATGGGCACGTGGCAAGATGACCATAGACAGCACAGCCTTAATCTTTCCACTGGCCACTGGCCTCTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| 3UTR CCA 72 bp | CTGTCACCCAGCCGGCCTTATTCTCATTCTATCTGCTaGACTCCTCGTTCTGACAAGGCCTATGCTCTGGCC | + |
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Preference number: 3 (lower is better) Translates to: LSPSRPYSHSIC*TPRSDKAYALA Trigger: GGCCAGAGCATAGGCCTTGTCAGAACGAGGAGTCCAGCAGATAGAATGAGAATAAGGCCGGCTGGGTGACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| 3UTR TCA 72 bp | GCCTTATTCTCATTCTATCTGCTGGACTCCTCGTTCTaGCAAGGCCTATGCTCTGGCCCAGCTGAGGCTTGT | + |
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Preference number: 3 (lower is better) Translates to: ALFSFYLLDSSF*QGLCSGPAEAC Trigger: ACAAGCCTCAGCTGGGCCAGAGCATAGGCCTTGTCAGAACGAGGAGTCCAGCAGATAGAATGAGAATAAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| 3UTR CCA 72 bp | ACTTGGTACTTGGTAGTACAGTACATCTCACGGTTCTaGTTCCTGAGGACCCAGAGCCAAGGCAGACAGTGG | + |
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Preference number: 3 (lower is better) Translates to: TWYLVVQYISRF*FLRTQSQGRQW Trigger: CCACTGTCTGCCTTGGCTCTGGGTCCTCAGGAACCAGAACCGTGAGATGTACTGTACTACCAAGTACCAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| 3UTR CCA 72 bp | GGCACAAGCCAAAAAGTACTGTGCTGTAAAGTTAGCTaGGGCTCAGCATTGTCTGTTCACGGCCTCCAGTCG | + |
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Preference number: 3 (lower is better) Translates to: GTSQKVLCCKVS*GSALSVHGLQS Trigger: CGACTGGAGGCCGTGAACAGACAATGCTGAGCCCCAGCTAACTTTACAGCACAGTACTTTTTGGCTTGTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| 3UTR CCA 72 bp | GAGGTTCCGATACATCTGCCCCAGGCCCTAGGCTGGTaGATAACTAGTGGTTCTTTGACTTGGTACTTGGTA | + |
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Preference number: 3 (lower is better) Translates to: EVPIHLPQALGW*ITSGSLTWYLV Trigger: TACCAAGTACCAAGTCAAAGAACCACTAGTTATCCACCAGCCTAGGGCCTGGGGCAGATGTATCGGAACCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| 3UTR CCA 72 bp | GTTGAGGTTCCGATACATCTGCCCCAGGCCCTAGGCTaGTGGATAACTAGTGGTTCTTTGACTTGGTACTTG | + |
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Preference number: 3 (lower is better) Translates to: VEVPIHLPQALG*WITSGSLTWYL Trigger: CAAGTACCAAGTCAAAGAACCACTAGTTATCCACCAGCCTAGGGCCTGGGGCAGATGTATCGGAACCTCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| 3UTR GCA 72 bp | CTGAGGCTTGTGGCAACAGGAAGTAGAGTTTCAGGGTaGTGTATGGGCCTTCAGTTCTTTAATGGGGAACCT | + |
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Preference number: 3 (lower is better) Translates to: LRLVATGSRVSG*CMGLQFFNGEP Trigger: AGGTTCCCCATTAAAGAACTGAAGGCCCATACAGCACCCTGAAACTCTACTTCCTGTTGCCACAAGCCTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| 3UTR GCA 72 bp | GTGGAAAGATTAAGGCTGTGCTGTCTATGGTCATCTTaGCACGTGCCCATTGGCACAAGCCAAAAAGTACTG | + |
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Preference number: 3 (lower is better) Translates to: VERLRLCCLWSS*HVPIGTSQKVL Trigger: CAGTACTTTTTGGCTTGTGCCAATGGGCACGTGGCAAGATGACCATAGACAGCACAGCCTTAATCTTTCCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| 3UTR CCA 72 bp | GCCCTAGGCTGGTGGATAACTAGTGGTTCTTTGACTTaGTACTTGGTAGTACAGTACATCTCACGGTTCTGG | + |
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Preference number: 3 (lower is better) Translates to: ALGWWITSGSLT*YLVVQYISRFW Trigger: CCAGAACCGTGAGATGTACTGTACTACCAAGTACCAAGTCAAAGAACCACTAGTTATCCACCAGCCTAGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| CDS-3UTR TCA 90 bp | CCTTCCTTGCACTGGATAGCAGGAGCCCAGGCTGATCAGGAAGCTGCCCTCTGCGGTGTTTTCTTCCTCTaGGAAGCTGGCCAAGCTGCG | + |
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Preference number: 4 (lower is better) Translates to: PSLHWIAGAQADQEAALCGVFFL*EAGQAA Trigger: CGCAGCTTGGCCAGCTTCTCAGAGGAAGAAAACACC...GCAGAGGGCAGCTTCCTGATCAGCCTGGGCTCCTGCTATCCAGTGCAAGGAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| CDS-3UTR GCA 90 bp | TCGTGTGAGGCACACGTGTGTCACAGTGATCCTGTACCCGTGCCCAAAACGCCTGTCAGCTGGTTTGGTTaGCTCCTGCAGCAGCACCTG | + |
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Preference number: 4 (lower is better) Translates to: SCEAHVCHSDPVPVPKTPVSWFG*LLQQHL Trigger: CAGGTGCTGCTGCAGGAGGCAACCAAACCAGCTGAC...AGGCGTTTTGGGCACGGGTACAGGATCACTGTGACACACGTGTGCCTCACACGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| CDS-3UTR TCA 90 bp | GTTTCAGGGTGCTGTATGGGCCTTCAGTTCTTTAATGGGGAACCTGGAACCAGCGGCCAAGCTGCGTCTTaGCGGGAGCAGGAGGCCTTT | + |
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Preference number: 4 (lower is better) Translates to: VSGCCMGLQFFNGEPGTSGQAAS*REQEAF Trigger: AAAGGCCTCCTGCTCCCGTCAAGACGCAGCTTGGCC...GCTGGTTCCAGGTTCCCCATTAAAGAACTGAAGGCCCATACAGCACCCTGAAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| CDS-3UTR TCA 90 bp | GAGAAGGTCCATCAAGCCCCTTCCTTGCACTGGATAGCAGGAGCCCAGGCTGATTACCCAGGATCTTGTTaGAGATCCAGGGGCGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: EKVHQAPSLHWIAGAQADYPGSC*RSRGGS Trigger: AGACCCGCCCCTGGATCTTCAACAAGATCCTGGGTA...ATCAGCCTGGGCTCCTGCTATCCAGTGCAAGGAAGGGGCTTGATGGACCTTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| CDS-3UTR GCA 90 bp | TCGTGTGAGGCACACGTGTGTCACAGTGATCCTGTACCCGTGCCCAAAACGCCTTGCCGGCAAAGAAGCTaGTATTGGGCTGGGTCACAG | + |
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Preference number: 4 (lower is better) Translates to: SCEAHVCHSDPVPVPKTPCRQRS*YWAGSQ Trigger: CTGTGACCCAGCCCAATAGCAGCTTCTTTGCCGGCA...AGGCGTTTTGGGCACGGGTACAGGATCACTGTGACACACGTGTGCCTCACACGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| CDS-3UTR CCA 90 bp | CAGGGAAGAAGGAGGGTGCCTAGCAGCTGTTGGGCAGTGACTGAGCCTGGGCCAAAGCTGCTATTGGGCTaGGTCACAGCCATTTTGATG | + |
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Preference number: 4 (lower is better) Translates to: QGRRRVPSSCWAVTEPGPKLLLG*VTAILM Trigger: CATCAAAATGGCTGTGACCCAGCCCAATAGCAGCTT...TGGCCCAGGCTCAGTCACTGCCCAACAGCTGCTAGGCACCCTCCTTCTTCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| 3UTR CAA 72 bp | GGGCTGCATGAGAGGCACAGAAACCACCAGTTAGATTaGCCTGATGCCAGGCACTCGTGTGAGGCACACGTG | + |
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Preference number: 4 (lower is better) Translates to: GLHERHRNHQLD*PDARHSCEAHV Trigger: CACGTGTGCCTCACACGAGTGCCTGGCATCAGGCAAATCTAACTGGTGGTTTCTGTGCCTCTCATGCAGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| 3UTR CAA 72 bp | GTCAGGGACTCTGAGAAGGTCCATCAAGCCCCTTCCTaGCACTGGATAGCAGGAGCCCAGGCTGATCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: VRDSEKVHQAPS*HWIAGAQADQE Trigger: TTCCTGATCAGCCTGGGCTCCTGCTATCCAGTGCAAGGAAGGGGCTTGATGGACCTTCTCAGAGTCCCTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| CDS-3UTR TCA 90 bp | GAGAAGGTCCATCAAGCCCCTTCCTTGCACTGGATAGCAGGAGCCCAGGCTGATTCAGCTCCATCAGCTTaGCAGTGGTACCCAGGATCT | + |
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Preference number: 4 (lower is better) Translates to: EKVHQAPSLHWIAGAQADSAPSA*QWYPGS Trigger: AGATCCTGGGTACCACTGTCAAGCTGATGGAGCTGA...ATCAGCCTGGGCTCCTGCTATCCAGTGCAAGGAAGGGGCTTGATGGACCTTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| CDS-3UTR TCA 90 bp | CTCACGGTTCTGGTTCCTGAGGACCCAGAGCCAAGGCAGACAGTGGGCAAGGGAGCAGTAACTCGTGTTTaGCTTCAGCTCCATCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: LTVLVPEDPEPRQTVGKGAVTRV*LQLHQL Trigger: AAGCTGATGGAGCTGAAGTCAAACACGAGTTACTGC...TCCCTTGCCCACTGTCTGCCTTGGCTCTGGGTCCTCAGGAACCAGAACCGTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| CDS-3UTR TCA 90 bp | CACCAGTTAGATTTGCCTGATGCCAGGCACTCGTGTGAGGCACACGTGTGTCACGGGTCACAGCCATTTTaGTGGGGTTCATCAGAGTGG | + |
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Preference number: 4 (lower is better) Translates to: HQLDLPDARHSCEAHVCHGSQPF*WGSSEW Trigger: CCACTCTGATGAACCCCATCAAAATGGCTGTGACCC...GTGACACACGTGTGCCTCACACGAGTGCCTGGCATCAGGCAAATCTAACTGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| CDS-3UTR TCA 90 bp | GCAATAAGGGAGAGGCCAGTGGCCAGTGGAAAGATTAAGGCTGTGCTGTCTATGGCACCTGGTAGAAACTaGCCTGCTGCTTGCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: AIRERPVASGKIKAVLSMAPGRN*PAACLQ Trigger: CTGCAGGCAAGCAGCAGGTCAGTTTCTACCAGGTGC...CATAGACAGCACAGCCTTAATCTTTCCACTGGCCACTGGCCTCTCCCTTATTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| CDS-3UTR GCA 90 bp | GTTTCAGGGTGCTGTATGGGCCTTCAGTTCTTTAATGGGGAACCTGGAACCAGCGCTCCCCCTCCAGGATaGCGGCAAAGAAGCTGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: VSGCCMGLQFFNGEPGTSAPPPG*RQRSCY Trigger: ATAGCAGCTTCTTTGCCGGCATCCTGGAGGGGGAGC...GCTGGTTCCAGGTTCCCCATTAAAGAACTGAAGGCCCATACAGCACCCTGAAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| CDS-3UTR GCA 90 bp | CTGTTCACGGCCTCCAGTCGTCTGTGGAGAGATTTCTGCGTCTGCCTGGTAGTAGACCTGCTGCTTGCCTaGAGCGTAAGTCCAGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LFTASSRLWRDFCVCLVVDLLLA*SVSPGN Trigger: ATTTCCTGGACTTACGCTGCAGGCAAGCAGCAGGTC...TACTACCAGGCAGACGCAGAAATCTCTCCACAGACGACTGGAGGCCGTGAACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| CDS-3UTR GCA 90 bp | GAGAAGGTCCATCAAGCCCCTTCCTTGCACTGGATAGCAGGAGCCCAGGCTGATCAAACTTATAGGGCTTaGACCACTTCCCTACCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: EKVHQAPSLHWIAGAQADQTYRA*TTSLPL Trigger: CAGGGGTAGGGAAGTGGTGCAAGCCCTATAAGTTTG...ATCAGCCTGGGCTCCTGCTATCCAGTGCAAGGAAGGGGCTTGATGGACCTTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| CDS-3UTR CCA 90 bp | CACTCGTGTGAGGCACACGTGTGTCACAGTGATCCTGTACCCGTGCCCAAAACGAATGAACGGAACCTCTaGCACATCCAGGACCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: HSCEAHVCHSDPVPVPKTNERNL*HIQDHR Trigger: TCTGTGGTCCTGGATGTGCCAGAGGTTCCGTTCATT...CGTTTTGGGCACGGGTACAGGATCACTGTGACACACGTGTGCCTCACACGAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| CDS-3UTR TCA 90 bp | GCTCTGGCCCAGCTGAGGCTTGTGGCAACAGGAAGTAGAGTTTCAGGGTGCTGTATCCGAGCTGTACTCTaGATCTTCCACTGGCATATG | + |
|
Preference number: 4 (lower is better) Translates to: ALAQLRLVATGSRVSGCCIRAVL*IFHWHM Trigger: CATATGCCAGTGGAAGATTCAGAGTACAGCTCGGAT...ACAGCACCCTGAAACTCTACTTCCTGTTGCCACAAGCCTCAGCTGGGCCAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| CDS-3UTR TCA 90 bp | TGGCCAGTGGAAAGATTAAGGCTGTGCTGTCTATGGTCATCTTGCCACGTGCCCCCACTGATGCCAAACTaGGTTTGTTCAGCTCCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: WPVERLRLCCLWSSCHVPPLMPN*VCSAPP Trigger: AGGGGGAGCTGAACAAACTCAGTTTGGCATCAGTGG...GGGCACGTGGCAAGATGACCATAGACAGCACAGCCTTAATCTTTCCACTGGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| CDS-3UTR TCA 90 bp | CTCACGGTTCTGGTTCCTGAGGACCCAGAGCCAAGGCAGACAGTGGGCAAGGGATGTGTTCTTGACCACTaGTGCCAAACTGAGTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LTVLVPEDPEPRQTVGKGCVLDH*CQTEFV Trigger: AACAAACTCAGTTTGGCATCAGTGGTCAAGAACACA...TCCCTTGCCCACTGTCTGCCTTGGCTCTGGGTCCTCAGGAACCAGAACCGTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| CDS-3UTR CCA 90 bp | CACCAGTTAGATTTGCCTGATGCCAGGCACTCGTGTGAGGCACACGTGTGTCACATGAACGGGGGCAGATaGCCAGATTATCCTTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HQLDLPDARHSCEAHVCHMNGGR*PDYPFL Trigger: CAGAAAAGGATAATCTGGCCATCTGCCCCCGTTCAT...GTGACACACGTGTGCCTCACACGAGTGCCTGGCATCAGGCAAATCTAACTGGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
||
| CDS-3UTR CCA 90 bp | GAGAAGGTCCATCAAGCCCCTTCCTTGCACTGGATAGCAGGAGCCCAGGCTGATCAGGGCTTTGGCAGTTaGTCAATCACATTGATAACA | + |
|
Preference number: 4 (lower is better) Translates to: EKVHQAPSLHWIAGAQADQGFGS*SITLIT Trigger: TGTTATCAATGTGATTGACCAACTGCCAAAGCCCTG...ATCAGCCTGGGCTCCTGCTATCCAGTGCAAGGAAGGGGCTTGATGGACCTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| CDS-3UTR CCA 90 bp | CTTGAGTGTCAGCCTGTCACCCAGCCGGCCTTATTCTCATTCTATCTGCTGGACCAAAGAAGCTGCTATTaGGCTGGGTCACAGCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: LECQPVTQPALFSFYLLDQRSCY*AGSQPF Trigger: AAATGGCTGTGACCCAGCCCAATAGCAGCTTCTTTG...GTCCAGCAGATAGAATGAGAATAAGGCCGGCTGGGTGACAGGCTGACACTCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
||
| 3UTR CAA 72 bp | AAGCTTCTTCCTACCTCCATTAGGGGGTTGTACATTTaGCGCGTCACTAAGCTGAGTATTCGGCCTCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KLLPTSIRGLYI*RVTKLSIRPPL Trigger: GAGAGGAGGCCGAATACTCAGCTTAGTGACGCGCAAAATGTACAACCCCCTAATGGAGGTAGGAAGAAGCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
||
| CDS-3UTR TCA 90 bp | GTTTCAGGGTGCTGTATGGGCCTTCAGTTCTTTAATGGGGAACCTGGAACCAGCCTGGCATATGCATCATaGCATCGGTGTTTTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VSGCCMGLQFFNGEPGTSLAYAS*HRCFLP Trigger: AGGAAGAAAACACCGATGTCATGATGCATATGCCAG...GCTGGTTCCAGGTTCCCCATTAAAGAACTGAAGGCCCATACAGCACCCTGAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
||
| 3UTR CAA 72 bp | GGCTGTGCTGTCTATGGTCATCTTGCCACGTGCCCATaGGCACAAGCCAAAAAGTACTGTGCTGTAAAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: GCAVYGHLATCP*AQAKKYCAVKL Trigger: TAACTTTACAGCACAGTACTTTTTGGCTTGTGCCAATGGGCACGTGGCAAGATGACCATAGACAGCACAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
||
| CDS-3UTR TCA 90 bp | ATAACTAGTGGTTCTTTGACTTGGTACTTGGTAGTACAGTACATCTCACGGTTCAGACTCAGAGCGTGTTaGGGAGGTGTCTGTGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ITSGSLTWYLVVQYISRFRLRAC*GGVCVQ Trigger: CTGGACACAGACACCTCCTCAACACGCTCTGAGTCT...GAACCGTGAGATGTACTGTACTACCAAGTACCAAGTCAAAGAACCACTAGTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| 3UTR CAA 72 bp | AGTGGAAAGATTAAGGCTGTGCTGTCTATGGTCATCTaGCCACGTGCCCATTGGCACAAGCCAAAAAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: SGKIKAVLSMVI*PRAHWHKPKST Trigger: AGTACTTTTTGGCTTGTGCCAATGGGCACGTGGCAAGATGACCATAGACAGCACAGCCTTAATCTTTCCACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
||
| CDS-3UTR CAA 90 bp | CTGTTCACGGCCTCCAGTCGTCTGTGGAGAGATTTCTGCGTCTGCCTGGTAGTACCTACCCCTGCTGTGTaGGCGGCCCGGACGGTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LFTASSRLWRDFCVCLVVPTPAV*AARTVR Trigger: CCTTACCGTCCGGGCCGCCAACACAGCAGGGGTAGG...TACTACCAGGCAGACGCAGAAATCTCTCCACAGACGACTGGAGGCCGTGAACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| CDS GCA 90 bp | GGGGCGGGTCTTGATCTTGGGCGTGTCCTTGTCAGCTGGTTTGGTTaGCTCCTGCAGCAGCACCTGGTAGAAACTGACCTGCTGCTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: GAGLDLGRVLVSWFG*LLQQHLVETDLLLA Trigger: GGCAAGCAGCAGGTCAGTTTCTACCAGGTGCTGCTGCAGGAGGCAACCAAACCAGCTGACAAGGACACGCCCAAGATCAAGACCCGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
||
| CDS-3UTR CAA 90 bp | CCTTCCTTGCACTGGATAGCAGGAGCCCAGGCTGATCAGGAAGCTGCCCTCTGCGTGGTACCCAGGATCTaGTTGAAGATCCAGGGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: PSLHWIAGAQADQEAALCVVPRI*LKIQGR Trigger: CCGCCCCTGGATCTTCAACAAGATCCTGGGTACCAC...GCAGAGGGCAGCTTCCTGATCAGCCTGGGCTCCTGCTATCCAGTGCAAGGAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| CDS-3UTR CAA 90 bp | ACTCGTGTGAGGCACACGTGTGTCACAGTGATCCTGTACCCGTGCCCAAAACGCGTGTCCAGGGCAGGGTaGTCAAGGTCCAATAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: TRVRHTCVTVILYPCPKRVSRAG*SRSNRP Trigger: GGGCCTATTGGACCTTGACAACCCTGCCCTGGACAC...GCGTTTTGGGCACGGGTACAGGATCACTGTGACACACGTGTGCCTCACACGAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
||
| CDS CCA 90 bp | GAAGATCCAGGGGCGGGTCTTGATCTTGGGCGTGTCCTTGTCAGCTaGTTTGGTTGCCTCCTGCAGCAGCACCTGGTAGAAACTGACCTG | + |
|
Preference number: 5 (lower is better) Translates to: EDPGAGLDLGRVLVS*FGCLLQQHLVETDL Trigger: CAGGTCAGTTTCTACCAGGTGCTGCTGCAGGAGGCAACCAAACCAGCTGACAAGGACACGCCCAAGATCAAGACCCGCCCCTGGATCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
||
| CDS-3UTR CAA 90 bp | CACCAGTTAGATTTGCCTGATGCCAGGCACTCGTGTGAGGCACACGTGTGTCACGGGCGGGTCTTGATCTaGGGCGTGTCCTTGTCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: HQLDLPDARHSCEAHVCHGRVLI*GVSLSA Trigger: AGCTGACAAGGACACGCCCAAGATCAAGACCCGCCC...GTGACACACGTGTGCCTCACACGAGTGCCTGGCATCAGGCAAATCTAACTGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| CDS-3UTR CAA 90 bp | CTGTCACCCAGCCGGCCTTATTCTCATTCTATCTGCTGGACTCCTCGTTCTGACGGGAGCAGGAGGCCTTaGGTAGCCATGGACCGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: LSPSRPYSHSICWTPRSDGSRRP*VAMDRL Trigger: TAACCGGTCCATGGCTACCAAAGGCCTCCTGCTCCC...GTCAGAACGAGGAGTCCAGCAGATAGAATGAGAATAAGGCCGGCTGGGTGACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| CDS-3UTR CAA 90 bp | GTAGTACAGTACATCTCACGGTTCTGGTTCCTGAGGACCCAGAGCCAAGGCAGAATCCAGGGGCGGGTCTaGATCTTGGGCGTGTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VVQYISRFWFLRTQSQGRIQGRV*ILGVSL Trigger: CAAGGACACGCCCAAGATCAAGACCCGCCCCTGGAT...TCTGCCTTGGCTCTGGGTCCTCAGGAACCAGAACCGTGAGATGTACTGTACTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| CDS TCA 90 bp | TGTCAGCTGGTTTGGTTGCCTCCTGCAGCAGCACCTGGTAGAAACTaGCCTGCTGCTTGCCTGCAGCGTAAGTCCAGGAAATCACAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: CQLVWLPPAAAPGRN*PAACLQRKSRKSQL Trigger: CAGCTGTGATTTCCTGGACTTACGCTGCAGGCAAGCAGCAGGTCAGTTTCTACCAGGTGCTGCTGCAGGAGGCAACCAAACCAGCTGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| CDS TCA 90 bp | CCCTGCTGTGTTGGCGGCCCGGACGGTAAGGCAGTAACTCGTGTTTaGCTTCAGCTCCATCAGCTTGACAGTGGTACCCAGGATCTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: PCCVGGPDGKAVTRV*LQLHQLDSGTQDLV Trigger: AACAAGATCCTGGGTACCACTGTCAAGCTGATGGAGCTGAAGTCAAACACGAGTTACTGCCTTACCGTCCGGGCCGCCAACACAGCAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| CDS TCA 90 bp | TCCAGCCTTCGCATCTCCTCCATTGTCATGGACACGGTCCTCCGATaGGGTTGTTTGCGTTGCACGGTGACCTGGATGGGATTGGTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SSLRISSIVMDTVLR*GCLRCTVTWMGLVS Trigger: TGAGACCAATCCCATCCAGGTCACCGTGCAACGCAAACAACCTCATCGGAGGACCGTGTCCATGACAATGGAGGAGATGCGAAGGCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| CDS GCA 90 bp | TGCCTCCTGCAGCAGCACCTGGTAGAAACTGACCTGCTGCTTGCCTaGAGCGTAAGTCCAGGAAATCACAGCTGTGGAATCGCCAACAGT | + |
|
Preference number: 5 (lower is better) Translates to: CLLQQHLVETDLLLA*SVSPGNHSCGIANS Trigger: ACTGTTGGCGATTCCACAGCTGTGATTTCCTGGACTTACGCTGCAGGCAAGCAGCAGGTCAGTTTCTACCAGGTGCTGCTGCAGGAGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| CDS-3UTR CAA 90 bp | GGTGCTGTATGGGCCTTCAGTTCTTTAATGGGGAACCTGGAACCAGCCCAGGTCGATGCCAAACTGAGTTaGTTCAGCTCCCCCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GAVWAFSSLMGNLEPAQVDAKLS*FSSPSR Trigger: CCTGGAGGGGGAGCTGAACAAACTCAGTTTGGCATC...GACCTGGGCTGGTTCCAGGTTCCCCATTAAAGAACTGAAGGCCCATACAGCACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| CDS-3UTR CAA 90 bp | TCGTGTGAGGCACACGTGTGTCACAGTGATCCTGTACCCGTGCCCAAAACGCCTTTCAGCTCCATCAGCTaGACAGTGGTACCCAGGATC | + |
|
Preference number: 5 (lower is better) Translates to: SCEAHVCHSDPVPVPKTPFSSIS*TVVPRI Trigger: GATCCTGGGTACCACTGTCAAGCTGATGGAGCTGAA...AGGCGTTTTGGGCACGGGTACAGGATCACTGTGACACACGTGTGCCTCACACGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| CDS-3UTR CAA 90 bp | AGTGTCAGCCTGTCACCCAGCCGGCCTTATTCTCATTCTATCTGCTGGACTCCTGCAAAGAAGCTGCTATaGGGCTGGGTCACAGCCATT | + |
|
Preference number: 5 (lower is better) Translates to: SVSLSPSRPYSHSICWTPAKKLL*GWVTAI Trigger: AATGGCTGTGACCCAGCCCAATAGCAGCTTCTTTGC...AGGAGTCCAGCAGATAGAATGAGAATAAGGCCGGCTGGGTGACAGGCTGACACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| CDS-3UTR CAA 90 bp | TGGCCAGTGGAAAGATTAAGGCTGTGCTGTCTATGGTCATCTTGCCACGTGCCCTGGGTCACAGCCATTTaGATGGGGTTCATCAGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: WPVERLRLCCLWSSCHVPWVTAI*MGFIRV Trigger: CACTCTGATGAACCCCATCAAAATGGCTGTGACCCA...GGGCACGTGGCAAGATGACCATAGACAGCACAGCCTTAATCTTTCCACTGGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| CDS TCA 90 bp | TCCAGGAAATCACAGCTGTGGAATCGCCAACAGTGTGTTCACAAATaGACGGAACCTCTGGCACATCCAGGACCACAGAAGACTCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SRKSQLWNRQQCVHK*TEPLAHPGPQKTQS Trigger: GCTCTGAGTCTTCTGTGGTCCTGGATGTGCCAGAGGTTCCGTTCATTTGTGAACACACTGTTGGCGATTCCACAGCTGTGATTTCCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| CDS-3UTR CAA 90 bp | TCGTGTGAGGCACACGTGTGTCACAGTGATCCTGTACCCGTGCCCAAAACGCCTAGTTGGTCAATCACATaGATAACATTGAGGGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SCEAHVCHSDPVPVPKTPSWSIT*ITLRAS Trigger: GGAAGCCCTCAATGTTATCAATGTGATTGACCAACT...AGGCGTTTTGGGCACGGGTACAGGATCACTGTGACACACGTGTGCCTCACACGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| CDS TCA 90 bp | TGTCATCCGAGCTGTACTCTGAATCTTCCACTGGCATATGCATCATaGCATCGGTGTTTTCTTCCTCTGAGAAGCTGGCCAAGCTGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: CHPSCTLNLPLAYAS*HRCFLPLRSWPSCV Trigger: GACGCAGCTTGGCCAGCTTCTCAGAGGAAGAAAACACCGATGTCATGATGCATATGCCAGTGGAAGATTCAGAGTACAGCTCGGATGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| CDS-3UTR CAA 90 bp | GTAGTACAGTACATCTCACGGTTCTGGTTCCTGAGGACCCAGAGCCAAGGCAGATCCTTTTCTGTGTTCTaGACCACTGATGCCAAACTG | + |
|
Preference number: 5 (lower is better) Translates to: VVQYISRFWFLRTQSQGRSFSVF*TTDAKL Trigger: CAGTTTGGCATCAGTGGTCAAGAACACAGAAAAGGA...TCTGCCTTGGCTCTGGGTCCTCAGGAACCAGAACCGTGAGATGTACTGTACTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| CDS GCA 90 bp | ATACTCGTGTCATCCGAGCTGTACTCTGAATCTTCCACTGGCATATaGATCATGACATCGGTGTTTTCTTCCTCTGAGAAGCTGGCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: ILVSSELYSESSTGI*IMTSVFSSSEKLAK Trigger: CTTGGCCAGCTTCTCAGAGGAAGAAAACACCGATGTCATGATGCATATGCCAGTGGAAGATTCAGAGTACAGCTCGGATGACACGAGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| CDS CCA 90 bp | CAGGAGGCCTTTGGTAGCCATGGACCGGTTAATAAACTTAGGATTTaGACAGGGCTTTGGCAGTTGGTCAATCACATTGATAACATTGAG | + |
|
Preference number: 5 (lower is better) Translates to: QEAFGSHGPVNKLRI*TGLWQLVNHIDNIE Trigger: CTCAATGTTATCAATGTGATTGACCAACTGCCAAAGCCCTGTCCAAATCCTAAGTTTATTAACCGGTCCATGGCTACCAAAGGCCTCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| CDS CCA 90 bp | GGTAGCCATGGACCGGTTAATAAACTTAGGATTTGGACAGGGCTTTaGCAGTTGGTCAATCACATTGATAACATTGAGGGCTTCCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: GSHGPVNKLRIWTGL*QLVNHIDNIEGFLL Trigger: AAGAAGGAAGCCCTCAATGTTATCAATGTGATTGACCAACTGCCAAAGCCCTGTCCAAATCCTAAGTTTATTAACCGGTCCATGGCTACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
||
| CDS CCA 90 bp | ATGGACCGGTTAATAAACTTAGGATTTGGACAGGGCTTTGGCAGTTaGTCAATCACATTGATAACATTGAGGGCTTCCTTCTTCGGTACA | + |
|
Preference number: 5 (lower is better) Translates to: MDRLINLGFGQGFGS*SITLITLRASFFGT Trigger: TGTACCGAAGAAGGAAGCCCTCAATGTTATCAATGTGATTGACCAACTGCCAAAGCCCTGTCCAAATCCTAAGTTTATTAACCGGTCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
||
| CDS CAA 90 bp | GTGGTACCCAGGATCTTGTTGAAGATCCAGGGGCGGGTCTTGATCTaGGGCGTGTCCTTGTCAGCTGGTTTGGTTGCCTCCTGCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: VVPRILLKIQGRVLI*GVSLSAGLVASCSS Trigger: GCTGCTGCAGGAGGCAACCAAACCAGCTGACAAGGACACGCCCAAGATCAAGACCCGCCCCTGGATCTTCAACAAGATCCTGGGTACCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
||
| CDS TCA 72 bp | GTTGGCGGCCCGGACGGTAAGGCAGTAACTCGTGTTTaGCTTCAGCTCCATCAGCTTGACAGTGGTACCCAG | + |
|
Preference number: 6 (lower is better) Translates to: VGGPDGKAVTRV*LQLHQLDSGTQ Trigger: CTGGGTACCACTGTCAAGCTGATGGAGCTGAAGTCAAACACGAGTTACTGCCTTACCGTCCGGGCCGCCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
||
| CDS TCA 72 bp | CGCATCTCCTCCATTGTCATGGACACGGTCCTCCGATaGGGTTGTTTGCGTTGCACGGTGACCTGGATGGGA | + |
|
Preference number: 6 (lower is better) Translates to: RISSIVMDTVLR*GCLRCTVTWMG Trigger: TCCCATCCAGGTCACCGTGCAACGCAAACAACCTCATCGGAGGACCGTGTCCATGACAATGGAGGAGATGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
||
| CDS GCA 72 bp | TGCAAACTTATAGGGCTTGCACCACTTCCCTACCCCTaGTGTGTTGGCGGCCCGGACGGTAAGGCAGTAACT | + |
|
Preference number: 6 (lower is better) Translates to: CKLIGLAPLPYP*CVGGPDGKAVT Trigger: AGTTACTGCCTTACCGTCCGGGCCGCCAACACAGCAGGGGTAGGGAAGTGGTGCAAGCCCTATAAGTTTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
||
| CDS CAA 72 bp | CTGGCACATCCAGGACCACAGAAGACTCAGAGCGTGTaGAGGAGGTGTCTGTGTCCAGGGCAGGGTTGTCAA | + |
|
Preference number: 6 (lower is better) Translates to: LAHPGPQKTQSV*RRCLCPGQGCQ Trigger: TTGACAACCCTGCCCTGGACACAGACACCTCCTCAACACGCTCTGAGTCTTCTGTGGTCCTGGATGTGCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
||
| CDS CAA 90 bp | ACGGAACCTCTGGCACATCCAGGACCACAGAAGACTCAGAGCGTGTaGAGGAGGTGTCTGTGTCCAGGGCAGGGTTGTCAAGGTCCAATA | + |
|
Preference number: 6 (lower is better) Translates to: TEPLAHPGPQKTQSV*RRCLCPGQGCQGPI Trigger: TATTGGACCTTGACAACCCTGCCCTGGACACAGACACCTCCTCAACACGCTCTGAGTCTTCTGTGGTCCTGGATGTGCCAGAGGTTCCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| CDS CAA 90 bp | TTGACAGTGGTACCCAGGATCTTGTTGAAGATCCAGGGGCGGGTCTaGATCTTGGGCGTGTCCTTGTCAGCTGGTTTGGTTGCCTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: LTVVPRILLKIQGRV*ILGVSLSAGLVASC Trigger: GCAGGAGGCAACCAAACCAGCTGACAAGGACACGCCCAAGATCAAGACCCGCCCCTGGATCTTCAACAAGATCCTGGGTACCACTGTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| CDS TCA 72 bp | GTTTGGTTGCCTCCTGCAGCAGCACCTGGTAGAAACTaGCCTGCTGCTTGCCTGCAGCGTAAGTCCAGGAAA | + |
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Preference number: 6 (lower is better) Translates to: VWLPPAAAPGRN*PAACLQRKSRK Trigger: TTTCCTGGACTTACGCTGCAGGCAAGCAGCAGGTCAGTTTCTACCAGGTGCTGCTGCAGGAGGCAACCAAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| CDS GCA 72 bp | CTTGATCTTGGGCGTGTCCTTGTCAGCTGGTTTGGTTaGCTCCTGCAGCAGCACCTGGTAGAAACTGACCTG | + |
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Preference number: 6 (lower is better) Translates to: LDLGRVLVSWFG*LLQQHLVETDL Trigger: CAGGTCAGTTTCTACCAGGTGCTGCTGCAGGAGGCAACCAAACCAGCTGACAAGGACACGCCCAAGATCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| CDS CAA 72 bp | AGCTCCATCAGCTTGACAGTGGTACCCAGGATCTTGTaGAAGATCCAGGGGCGGGTCTTGATCTTGGGCGTG | + |
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Preference number: 6 (lower is better) Translates to: SSISLTVVPRIL*KIQGRVLILGV Trigger: CACGCCCAAGATCAAGACCCGCCCCTGGATCTTCAACAAGATCCTGGGTACCACTGTCAAGCTGATGGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| CDS CAA 90 bp | AGGATGCCGGCAAAGAAGCTGCTATTGGGCTGGGTCACAGCCATTTaGATGGGGTTCATCAGAGTGGACGGAATCGGGGACATACTCGTG | + |
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Preference number: 6 (lower is better) Translates to: RMPAKKLLLGWVTAI*MGFIRVDGIGDILV Trigger: CACGAGTATGTCCCCGATTCCGTCCACTCTGATGAACCCCATCAAAATGGCTGTGACCCAGCCCAATAGCAGCTTCTTTGCCGGCATCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| CDS CAA 90 bp | GAAGACTCAGAGCGTGTTGAGGAGGTGTCTGTGTCCAGGGCAGGGTaGTCAAGGTCCAATAGGCCCCTGGTGGCTATTTGGGACTTAGAT | + |
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Preference number: 6 (lower is better) Translates to: EDSERVEEVSVSRAG*SRSNRPLVAIWDLD Trigger: ATCTAAGTCCCAAATAGCCACCAGGGGCCTATTGGACCTTGACAACCCTGCCCTGGACACAGACACCTCCTCAACACGCTCTGAGTCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| CDS CAA 90 bp | CCTTCGCATCTCCTCCATTGTCATGGACACGGTCCTCCGATGAGGTaGTTTGCGTTGCACGGTGACCTGGATGGGATTGGTCTCAGGAAA | + |
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Preference number: 6 (lower is better) Translates to: PSHLLHCHGHGPPMR*FALHGDLDGIGLRK Trigger: TTTCCTGAGACCAATCCCATCCAGGTCACCGTGCAACGCAAACAACCTCATCGGAGGACCGTGTCCATGACAATGGAGGAGATGCGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| CDS GCA 72 bp | CAGCAGCACCTGGTAGAAACTGACCTGCTGCTTGCCTaGAGCGTAAGTCCAGGAAATCACAGCTGTGGAATC | + |
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Preference number: 6 (lower is better) Translates to: QQHLVETDLLLA*SVSPGNHSCGI Trigger: GATTCCACAGCTGTGATTTCCTGGACTTACGCTGCAGGCAAGCAGCAGGTCAGTTTCTACCAGGTGCTGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| CDS CCA 72 bp | GGGTTGTCAAGGTCCAATAGGCCCCTGGTGGCTATTTaGGACTTAGATGAACGGGGGCAGATGGCCAGATTA | + |
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Preference number: 6 (lower is better) Translates to: GLSRSNRPLVAI*DLDERGQMARL Trigger: TAATCTGGCCATCTGCCCCCGTTCATCTAAGTCCCAAATAGCCACCAGGGGCCTATTGGACCTTGACAACCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| CDS CAA 72 bp | GCAAAGAAGCTGCTATTGGGCTGGGTCACAGCCATTTaGATGGGGTTCATCAGAGTGGACGGAATCGGGGAC | + |
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Preference number: 6 (lower is better) Translates to: AKKLLLGWVTAI*MGFIRVDGIGD Trigger: GTCCCCGATTCCGTCCACTCTGATGAACCCCATCAAAATGGCTGTGACCCAGCCCAATAGCAGCTTCTTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| CDS CAA 72 bp | TTCAGCTCCATCAGCTTGACAGTGGTACCCAGGATCTaGTTGAAGATCCAGGGGCGGGTCTTGATCTTGGGC | + |
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Preference number: 6 (lower is better) Translates to: FSSISLTVVPRI*LKIQGRVLILG Trigger: GCCCAAGATCAAGACCCGCCCCTGGATCTTCAACAAGATCCTGGGTACCACTGTCAAGCTGATGGAGCTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| CDS CAA 72 bp | TGTCATGGACACGGTCCTCCGATGAGGTTGTTTGCGTaGCACGGTGACCTGGATGGGATTGGTCTCAGGAAA | + |
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Preference number: 6 (lower is better) Translates to: CHGHGPPMRLFA*HGDLDGIGLRK Trigger: TTTCCTGAGACCAATCCCATCCAGGTCACCGTGCAACGCAAACAACCTCATCGGAGGACCGTGTCCATGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| CDS CAA 90 bp | GTGTTTGACTTCAGCTCCATCAGCTTGACAGTGGTACCCAGGATCTaGTTGAAGATCCAGGGGCGGGTCTTGATCTTGGGCGTGTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: VFDFSSISLTVVPRI*LKIQGRVLILGVSL Trigger: CAAGGACACGCCCAAGATCAAGACCCGCCCCTGGATCTTCAACAAGATCCTGGGTACCACTGTCAAGCTGATGGAGCTGAAGTCAAACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| CDS CAA 90 bp | TTTGACTTCAGCTCCATCAGCTTGACAGTGGTACCCAGGATCTTGTaGAAGATCCAGGGGCGGGTCTTGATCTTGGGCGTGTCCTTGTCA | + |
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Preference number: 6 (lower is better) Translates to: FDFSSISLTVVPRIL*KIQGRVLILGVSLS Trigger: TGACAAGGACACGCCCAAGATCAAGACCCGCCCCTGGATCTTCAACAAGATCCTGGGTACCACTGTCAAGCTGATGGAGCTGAAGTCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| CDS TCA 72 bp | TCACAGCTGTGGAATCGCCAACAGTGTGTTCACAAATaGACGGAACCTCTGGCACATCCAGGACCACAGAAG | + |
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Preference number: 6 (lower is better) Translates to: SQLWNRQQCVHK*TEPLAHPGPQK Trigger: CTTCTGTGGTCCTGGATGTGCCAGAGGTTCCGTTCATTTGTGAACACACTGTTGGCGATTCCACAGCTGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| CDS CAA 72 bp | CAGGGCTTTGGCAGTTGGTCAATCACATTGATAACATaGAGGGCTTCCTTCTTCGGTACAGCCTCCTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: QGFGSWSITLIT*RASFFGTASSP Trigger: TGGAGAGGAGGCTGTACCGAAGAAGGAAGCCCTCAATGTTATCAATGTGATTGACCAACTGCCAAAGCCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| CDS CAA 72 bp | TTTTCTGTGTTCTTGACCACTGATGCCAAACTGAGTTaGTTCAGCTCCCCCTCCAGGATGCCGGCAAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: FSVFLTTDAKLS*FSSPSRMPAKK Trigger: CTTCTTTGCCGGCATCCTGGAGGGGGAGCTGAACAAACTCAGTTTGGCATCAGTGGTCAAGAACACAGAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| CDS CAA 90 bp | AGATTATCCTTTTCTGTGTTCTTGACCACTGATGCCAAACTGAGTTaGTTCAGCTCCCCCTCCAGGATGCCGGCAAAGAAGCTGCTATTG | + |
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Preference number: 6 (lower is better) Translates to: RLSFSVFLTTDAKLS*FSSPSRMPAKKLLL Trigger: CAATAGCAGCTTCTTTGCCGGCATCCTGGAGGGGGAGCTGAACAAACTCAGTTTGGCATCAGTGGTCAAGAACACAGAAAAGGATAATCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| CDS TCA 72 bp | AGCTGTACTCTGAATCTTCCACTGGCATATGCATCATaGCATCGGTGTTTTCTTCCTCTGAGAAGCTGGCCA | + |
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Preference number: 6 (lower is better) Translates to: SCTLNLPLAYAS*HRCFLPLRSWP Trigger: TGGCCAGCTTCTCAGAGGAAGAAAACACCGATGTCATGATGCATATGCCAGTGGAAGATTCAGAGTACAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| CDS CAA 90 bp | ATAAACTTAGGATTTGGACAGGGCTTTGGCAGTTGGTCAATCACATaGATAACATTGAGGGCTTCCTTCTTCGGTACAGCCTCCTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: INLGFGQGFGSWSIT*ITLRASFFGTASSP Trigger: TGGAGAGGAGGCTGTACCGAAGAAGGAAGCCCTCAATGTTATCAATGTGATTGACCAACTGCCAAAGCCCTGTCCAAATCCTAAGTTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| CDS GCA 72 bp | TCATCCGAGCTGTACTCTGAATCTTCCACTGGCATATaGATCATGACATCGGTGTTTTCTTCCTCTGAGAAG | + |
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Preference number: 6 (lower is better) Translates to: SSELYSESSTGI*IMTSVFSSSEK Trigger: CTTCTCAGAGGAAGAAAACACCGATGTCATGATGCATATGCCAGTGGAAGATTCAGAGTACAGCTCGGATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| CDS CAA 90 bp | CATGGACCGGTTAATAAACTTAGGATTTGGACAGGGCTTTGGCAGTaGGTCAATCACATTGATAACATTGAGGGCTTCCTTCTTCGGTAC | + |
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Preference number: 6 (lower is better) Translates to: HGPVNKLRIWTGLWQ*VNHIDNIEGFLLRY Trigger: GTACCGAAGAAGGAAGCCCTCAATGTTATCAATGTGATTGACCAACTGCCAAAGCCCTGTCCAAATCCTAAGTTTATTAACCGGTCCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| CDS CCA 72 bp | GGACCGGTTAATAAACTTAGGATTTGGACAGGGCTTTaGCAGTTGGTCAATCACATTGATAACATTGAGGGC | + |
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Preference number: 6 (lower is better) Translates to: GPVNKLRIWTGL*QLVNHIDNIEG Trigger: GCCCTCAATGTTATCAATGTGATTGACCAACTGCCAAAGCCCTGTCCAAATCCTAAGTTTATTAACCGGTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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| CDS CCA 72 bp | TTTGGTAGCCATGGACCGGTTAATAAACTTAGGATTTaGACAGGGCTTTGGCAGTTGGTCAATCACATTGAT | + |
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Preference number: 6 (lower is better) Translates to: FGSHGPVNKLRI*TGLWQLVNHID Trigger: ATCAATGTGATTGACCAACTGCCAAAGCCCTGTCCAAATCCTAAGTTTATTAACCGGTCCATGGCTACCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018988.6 |
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