Pregenerated sensors for FNDC5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001334Ensembl transcript IDs: ENSMUST00000102600.4
Found 117 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACTGTGGCTAGCTGTGCCCCCACCGCTTCTACAGCTCTCACCCCGTaGCCAGGAAGGACACAGGGACTAGCGGAGGATGAAGCCCATCCC | + |
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Preference number: 1 (lower is better) Translates to: TVASCAPTASTALTP*PGRTQGLAEDEAHP Trigger: GGGATGGGCTTCATCCTCCGCTAGTCCCTGTGTCCTTCCTGGGCACGGGGTGAGAGCTGTAGAAGCGGTGGGGGCACAGCTAGCCACAGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| 3UTR CCA 90 bp | GTCCCTCCTCTCCTGTGCTACCCGCAGTTGGAGCGAGCACAGTGGTaGCTGACCCAGCTTGGAGAGCTGTTAGAGACCCGAATGAAGGGG | + |
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Preference number: 1 (lower is better) Translates to: VPPLLCYPQLERAQW*LTQLGELLETRMKG Trigger: CCCCTTCATTCGGGTCTCTAACAGCTCTCCAAGCTGGGTCAGCCACCACTGTGCTCGCTCCAACTGCGGGTAGCACAGGAGAGGAGGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| 3UTR CCA 90 bp | GAGTCCTGTGCCAAGAGCCTTGGCACTCAGTCTACCCCGCAGCAATaGCATCCCTCCGGCTGGGTCTCTCTCATTCTGCAGCTCTGTCTC | + |
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Preference number: 1 (lower is better) Translates to: ESCAKSLGTQSTPQQ*HPSGWVSLILQLCL Trigger: GAGACAGAGCTGCAGAATGAGAGAGACCCAGCCGGAGGGATGCCATTGCTGCGGGGTAGACTGAGTGCCAAGGCTCTTGGCACAGGACTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| 3UTR CCA 90 bp | ACCTCCCTTAAGGAGCCTTGGCCTTGCAGCCCCGTTCAGCAGGGATaGAAGTCACGAGACAATGAGTGGAACCTCATTCCCTCCCAGGAG | + |
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Preference number: 1 (lower is better) Translates to: TSLKEPWPCSPVQQG*KSRDNEWNLIPSQE Trigger: CTCCTGGGAGGGAATGAGGTTCCACTCATTGTCTCGTGACTTCCATCCCTGCTGAACGGGGCTGCAAGGCCAAGGCTCCTTAAGGGAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| 3UTR GCA 90 bp | AACCTCATTCCCTCCCAGGAGGAAGCCCTTAGTATTGCTGACATCTaGCCTTATCCGTCCCTCCTCTCCTGTGCTACCCGCAGTTGGAGC | + |
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Preference number: 1 (lower is better) Translates to: NLIPSQEEALSIADI*PYPSLLSCATRSWS Trigger: GCTCCAACTGCGGGTAGCACAGGAGAGGAGGGACGGATAAGGGCAGATGTCAGCAATACTAAGGGCTTCCTCCTGGGAGGGAATGAGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| 3UTR GCA 90 bp | CTAACTGGATTGGAGGTAAGGACCTCCCTTAAGGAGCCTTGGCCTTaGAGCCCCGTTCAGCAGGGATGGAAGTCACGAGACAATGAGTGG | + |
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Preference number: 1 (lower is better) Translates to: LTGLEVRTSLKEPWP*SPVQQGWKSRDNEW Trigger: CCACTCATTGTCTCGTGACTTCCATCCCTGCTGAACGGGGCTGCAAGGCCAAGGCTCCTTAAGGGAGGTCCTTACCTCCAATCCAGTTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| 3UTR CCA 90 bp | CCGATGGAAGATACAGAGTTCGTTCGCCTTTCCAGTGCAGGCGTCTaGCAGCCACTGTGCTTCAGTCTCCAAGAAGTCTGCTGCCACATC | + |
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Preference number: 1 (lower is better) Translates to: PMEDTEFVRLSSAGV*QPLCFSLQEVCCHI Trigger: GATGTGGCAGCAGACTTCTTGGAGACTGAAGCACAGTGGCTGCCAGACGCCTGCACTGGAAAGGCGAACGAACTCTGTATCTTCCATCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| 3UTR CCA 90 bp | CCTTGCAGCCCCGTTCAGCAGGGATGGAAGTCACGAGACAATGAGTaGAACCTCATTCCCTCCCAGGAGGAAGCCCTTAGTATTGCTGAC | + |
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Preference number: 1 (lower is better) Translates to: PCSPVQQGWKSRDNE*NLIPSQEEALSIAD Trigger: GTCAGCAATACTAAGGGCTTCCTCCTGGGAGGGAATGAGGTTCCACTCATTGTCTCGTGACTTCCATCCCTGCTGAACGGGGCTGCAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| 3UTR CCA 90 bp | TACCAAGCACCTACTATGTGCTGGGAACAGCCACCCACACTCCCTTaGCCACCGATGGAAGATACAGAGTTCGTTCGCCTTTCCAGTGCA | + |
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Preference number: 1 (lower is better) Translates to: YQAPTMCWEQPPTLP*PPMEDTEFVRLSSA Trigger: TGCACTGGAAAGGCGAACGAACTCTGTATCTTCCATCGGTGGCCAAGGGAGTGTGGGTGGCTGTTCCCAGCACATAGTAGGTGCTTGGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| 3UTR GCA 90 bp | ACAGAGTTCGTTCGCCTTTCCAGTGCAGGCGTCTGGCAGCCACTGTaGTTCAGTCTCCAAGAAGTCTGCTGCCACATCAAGCACCTTTTT | + |
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Preference number: 1 (lower is better) Translates to: TEFVRLSSAGVWQPL*FSLQEVCCHIKHLF Trigger: AAAAAGGTGCTTGATGTGGCAGCAGACTTCTTGGAGACTGAAGCACAGTGGCTGCCAGACGCCTGCACTGGAAAGGCGAACGAACTCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| 3UTR CCA 90 bp | GCTGAATCCAGAAAGTGTCTGACAGAGTCAGGACCCTTGAAAAGCTaGCAGCACTGCAGCCTCCCTGGTACCATTGGTCTGACAGACACA | + |
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Preference number: 1 (lower is better) Translates to: AESRKCLTESGPLKS*QHCSLPGTIGLTDT Trigger: TGTGTCTGTCAGACCAATGGTACCAGGGAGGCTGCAGTGCTGCCAGCTTTTCAAGGGTCCTGACTCTGTCAGACACTTTCTGGATTCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| 3UTR CCA 90 bp | ATTGCTCTAACTGGATTGGAGGTAAGGACCTCCCTTAAGGAGCCTTaGCCTTGCAGCCCCGTTCAGCAGGGATGGAAGTCACGAGACAAT | + |
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Preference number: 1 (lower is better) Translates to: IALTGLEVRTSLKEP*PCSPVQQGWKSRDN Trigger: ATTGTCTCGTGACTTCCATCCCTGCTGAACGGGGCTGCAAGGCCAAGGCTCCTTAAGGGAGGTCCTTACCTCCAATCCAGTTAGAGCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| 3UTR GCA 90 bp | GCTCAACATTCAGTACCACAGATATTTTACCAAGCACCTACTATGTaGTGGGAACAGCCACCCACACTCCCTTGGCCACCGATGGAAGAT | + |
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Preference number: 1 (lower is better) Translates to: AQHSVPQIFYQAPTM*WEQPPTLPWPPMED Trigger: ATCTTCCATCGGTGGCCAAGGGAGTGTGGGTGGCTGTTCCCAGCACATAGTAGGTGCTTGGTAAAATATCTGTGGTACTGAATGTTGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| 3UTR CCA 90 bp | AGCCAGACTCTTGTCCCTCGCAGAAATAAAAAGAATAGCCCTGCCTaGAAGTCTCGTCTTTCTCCCCTTTCACACACAGCCTTCGGTCAA | + |
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Preference number: 1 (lower is better) Translates to: SQTLVPRRNKKNSPA*KSRLSPLSHTAFGQ Trigger: TTGACCGAAGGCTGTGTGTGAAAGGGGAGAAAGACGAGACTTCCAGGCAGGGCTATTCTTTTTATTTCTGCGAGGGACAAGAGTCTGGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| 3UTR CAA 90 bp | TCGGTCAAGCTGAGTGGCCCAGATGTGAGTCCTGTGCCAAGAGCCTaGGCACTCAGTCTACCCCGCAGCAATGGCATCCCTCCGGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: SVKLSGPDVSPVPRA*ALSLPRSNGIPPAG Trigger: CCCAGCCGGAGGGATGCCATTGCTGCGGGGTAGACTGAGTGCCAAGGCTCTTGGCACAGGACTCACATCTGGGCCACTCAGCTTGACCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| 3UTR-3UTR TCA 90 bp | TGCCCAGGAAGGACACAGGGACTAGCGGAGGATGAAGCCCATCCCTTGCAGATGAGCCATGGACATTGCTaGGGTACTCCTGGAGCTAGG | + |
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Preference number: 2 (lower is better) Translates to: CPGRTQGLAEDEAHPLQMSHGHC*GTPGAR Trigger: CCTAGCTCCAGGAGTACCTCAGCAATGTCCATGGCT...CATCTGCAAGGGATGGGCTTCATCCTCCGCTAGTCCCTGTGTCCTTCCTGGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| 3UTR-3UTR TCA 90 bp | GCTCTAACTGGATTGGAGGTAAGGACCTCCCTTAAGGAGCCTTGGCCTTGCAGCGAGCACAGTGGTGGCTaGCCCAGCTTGGAGAGCTGT | + |
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Preference number: 2 (lower is better) Translates to: ALTGLEVRTSLKEPWPCSEHSGG*PSLESC Trigger: ACAGCTCTCCAAGCTGGGTCAGCCACCACTGTGCTC...GCTGCAAGGCCAAGGCTCCTTAAGGGAGGTCCTTACCTCCAATCCAGTTAGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| 3UTR-3UTR CCA 90 bp | AGAAGTAAGGCAGGACTCTCCCATGTACTTGTGCCTTCTTCAGAATGGGGCGCAAGGAGAAGATGGAGGTaGGAGGAGCCGCAGAGCGGG | + |
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Preference number: 2 (lower is better) Translates to: RSKAGLSHVLVPSSEWGARRRWR*EEPQSG Trigger: CCCGCTCTGCGGCTCCTCCCACCTCCATCTTCTCCT...TGCGCCCCATTCTGAAGAAGGCACAAGTACATGGGAGAGTCCTGCCTTACTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| 3UTR-3UTR GCA 90 bp | GCTCTAACTGGATTGGAGGTAAGGACCTCCCTTAAGGAGCCTTGGCCTTGCAGCCTTGGCAGAGCGGTCTaGATTCTGGAGCAAAGCCCT | + |
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Preference number: 2 (lower is better) Translates to: ALTGLEVRTSLKEPWPCSLGRAV*ILEQSP Trigger: AGGGCTTTGCTCCAGAATGCAGACCGCTCTGCCAAG...GCTGCAAGGCCAAGGCTCCTTAAGGGAGGTCCTTACCTCCAATCCAGTTAGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| 3UTR-3UTR GCA 90 bp | GCTCTAACTGGATTGGAGGTAAGGACCTCCCTTAAGGAGCCTTGGCCTTGCAGCCTGCTCTCTGCTCTCTaGCTGTCTGGTGTAAACGGC | + |
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Preference number: 2 (lower is better) Translates to: ALTGLEVRTSLKEPWPCSLLSAL*LSGVNG Trigger: GCCGTTTACACCAGACAGGCAGAGAGCAGAGAGCAG...GCTGCAAGGCCAAGGCTCCTTAAGGGAGGTCCTTACCTCCAATCCAGTTAGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| 3UTR-3UTR GCA 90 bp | CAGCAGGGATGGAAGTCACGAGACAATGAGTGGAACCTCATTCCCTCCCAGGAGACAGTGGCTGCTCTCTaGTCTCTGCCTGTCTGGTGT | + |
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Preference number: 2 (lower is better) Translates to: QQGWKSRDNEWNLIPSQETVAAL*SLPVWC Trigger: ACACCAGACAGGCAGAGAGCAGAGAGCAGCCACTGT...CTCCTGGGAGGGAATGAGGTTCCACTCATTGTCTCGTGACTTCCATCCCTGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| 3UTR-3UTR CCA 90 bp | CAGCAGGGATGGAAGTCACGAGACAATGAGTGGAACCTCATTCCCTCCCAGGAGCCACCCACACTCCCTTaGCCACCGATGGAAGATACA | + |
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Preference number: 2 (lower is better) Translates to: QQGWKSRDNEWNLIPSQEPPTLP*PPMEDT Trigger: TGTATCTTCCATCGGTGGCCAAGGGAGTGTGGGTGG...CTCCTGGGAGGGAATGAGGTTCCACTCATTGTCTCGTGACTTCCATCCCTGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| 3UTR CAA 90 bp | TTACCAAGCACCTACTATGTGCTGGGAACAGCCACCCACACTCCCTaGGCCACCGATGGAAGATACAGAGTTCGTTCGCCTTTCCAGTGC | + |
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Preference number: 2 (lower is better) Translates to: LPSTYYVLGTATHTP*ATDGRYRVRSPFQC Trigger: GCACTGGAAAGGCGAACGAACTCTGTATCTTCCATCGGTGGCCAAGGGAGTGTGGGTGGCTGTTCCCAGCACATAGTAGGTGCTTGGTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| 3UTR CAA 90 bp | ACCCAGCTTGGAGAGCTGTTAGAGACCCGAATGAAGGGGCAGTCATaGGGTGATGGCTTTCAGCTCTCTGACTTGGGCACCTGTGCTCAA | + |
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Preference number: 2 (lower is better) Translates to: TQLGELLETRMKGQS*GDGFQLSDLGTCAQ Trigger: TTGAGCACAGGTGCCCAAGTCAGAGAGCTGAAAGCCATCACCCAATGACTGCCCCTTCATTCGGGTCTCTAACAGCTCTCCAAGCTGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| 3UTR CAA 90 bp | ACAATGAGTGGAACCTCATTCCCTCCCAGGAGGAAGCCCTTAGTATaGCTGACATCTGCCCTTATCCGTCCCTCCTCTCCTGTGCTACCC | + |
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Preference number: 2 (lower is better) Translates to: TMSGTSFPPRRKPLV*LTSALIRPSSPVLP Trigger: GGGTAGCACAGGAGAGGAGGGACGGATAAGGGCAGATGTCAGCAATACTAAGGGCTTCCTCCTGGGAGGGAATGAGGTTCCACTCATTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| 3UTR-3UTR CCA 90 bp | GCTCTAACTGGATTGGAGGTAAGGACCTCCCTTAAGGAGCCTTGGCCTTGCAGCTCACGAGACAATGAGTaGAACCTCATTCCCTCCCAG | + |
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Preference number: 2 (lower is better) Translates to: ALTGLEVRTSLKEPWPCSSRDNE*NLIPSQ Trigger: CTGGGAGGGAATGAGGTTCCACTCATTGTCTCGTGA...GCTGCAAGGCCAAGGCTCCTTAAGGGAGGTCCTTACCTCCAATCCAGTTAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| 3UTR-3UTR CCA 90 bp | TTTGCAAAGGTGCACCTTGTACCACAGATGTCCTTAGTGGCTGAATCCAGAAAGGATGATAGGAGAAGATaGAGGTGGGAGGAGCCGCAG | + |
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Preference number: 2 (lower is better) Translates to: FAKVHLVPQMSLVAESRKDDRRR*RWEEPQ Trigger: CTGCGGCTCCTCCCACCTCCATCTTCTCCTATCATC...CTTTCTGGATTCAGCCACTAAGGACATCTGTGGTACAAGGTGCACCTTTGCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| 3UTR-3UTR GCA 90 bp | TTTGCAAAGGTGCACCTTGTACCACAGATGTCCTTAGTGGCTGAATCCAGAAAGAAGGAACAGCGGGGCTaGAGCTTAAAAGCCAGACTC | + |
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Preference number: 2 (lower is better) Translates to: FAKVHLVPQMSLVAESRKKEQRG*SLKARL Trigger: GAGTCTGGCTTTTAAGCTGCAGCCCCGCTGTTCCTT...CTTTCTGGATTCAGCCACTAAGGACATCTGTGGTACAAGGTGCACCTTTGCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| 3UTR-3UTR CCA 90 bp | CACCTGTGCTCAACATTCAGTACCACAGATATTTTACCAAGCACCTACTATGTGGCACTGCAGCCTCCCTaGTACCATTGGTCTGACAGA | + |
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Preference number: 2 (lower is better) Translates to: HLCSTFSTTDILPSTYYVALQPP*YHWSDR Trigger: TCTGTCAGACCAATGGTACCAGGGAGGCTGCAGTGC...CACATAGTAGGTGCTTGGTAAAATATCTGTGGTACTGAATGTTGAGCACAGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| 3UTR-3UTR GCA 90 bp | CACCTGTGCTCAACATTCAGTACCACAGATATTTTACCAAGCACCTACTATGTGGGGTCTCTCTCATTCTaGAGCTCTGTCTCTGGGTGT | + |
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Preference number: 2 (lower is better) Translates to: HLCSTFSTTDILPSTYYVGSLSF*SSVSGC Trigger: ACACCCAGAGACAGAGCTGCAGAATGAGAGAGACCC...CACATAGTAGGTGCTTGGTAAAATATCTGTGGTACTGAATGTTGAGCACAGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| 3UTR-3UTR CCA 90 bp | ACTTGGGCACCTGTGCTCAACATTCAGTACCACAGATATTTTACCAAGCACCTACACAGAGGGCTTCTTTaGAAACCAGGAAGGGAACAG | + |
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Preference number: 2 (lower is better) Translates to: TWAPVLNIQYHRYFTKHLHRGLL*KPGREQ Trigger: CTGTTCCCTTCCTGGTTTCCAAAGAAGCCCTCTGTG...TAGGTGCTTGGTAAAATATCTGTGGTACTGAATGTTGAGCACAGGTGCCCAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| 3UTR-3UTR TCA 90 bp | CACCTGTGCTCAACATTCAGTACCACAGATATTTTACCAAGCACCTACTATGTGTTCTCTACTGTCTTCTaGGCTGCTCAGAGCAAGCAC | + |
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Preference number: 2 (lower is better) Translates to: HLCSTFSTTDILPSTYYVFSTVF*AAQSKH Trigger: GTGCTTGCTCTGAGCAGCTCAGAAGACAGTAGAGAA...CACATAGTAGGTGCTTGGTAAAATATCTGTGGTACTGAATGTTGAGCACAGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| 3UTR-3UTR GCA 90 bp | TTTGCAAAGGTGCACCTTGTACCACAGATGTCCTTAGTGGCTGAATCCAGAAAGAGATGGGGGTACCCATaGTTTGATGATGTTCACAGA | + |
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Preference number: 2 (lower is better) Translates to: FAKVHLVPQMSLVAESRKRWGYP*FDDVHR Trigger: TCTGTGAACATCATCAAAGCATGGGTACCCCCATCT...CTTTCTGGATTCAGCCACTAAGGACATCTGTGGTACAAGGTGCACCTTTGCAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| 3UTR-3UTR GCA 90 bp | ACTTGGGCACCTGTGCTCAACATTCAGTACCACAGATATTTTACCAAGCACCTAGGCATCATACACATTTaGAAAGGTGCACCTTGTACC | + |
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Preference number: 2 (lower is better) Translates to: TWAPVLNIQYHRYFTKHLGIIHI*KGAPCT Trigger: GGTACAAGGTGCACCTTTGCAAATGTGTATGATGCC...TAGGTGCTTGGTAAAATATCTGTGGTACTGAATGTTGAGCACAGGTGCCCAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| 3UTR TCA 72 bp | CCCGTGCCCAGGAAGGACACAGGGACTAGCGGAGGATaGAGCCCATCCCTTGCAGATGGGGGTACCCATGCT | + |
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Preference number: 3 (lower is better) Translates to: PVPRKDTGTSGG*SPSLADGGTHA Trigger: AGCATGGGTACCCCCATCTGCAAGGGATGGGCTTCATCCTCCGCTAGTCCCTGTGTCCTTCCTGGGCACGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| 3UTR CCA 72 bp | GCCAAGAGCCTTGGCACTCAGTCTACCCCGCAGCAATaGCATCCCTCCGGCTGGGTCTCTCTCATTCTGCAG | + |
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Preference number: 3 (lower is better) Translates to: AKSLGTQSTPQQ*HPSGWVSLILQ Trigger: CTGCAGAATGAGAGAGACCCAGCCGGAGGGATGCCATTGCTGCGGGGTAGACTGAGTGCCAAGGCTCTTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| 3UTR CCA 72 bp | CTCCTGTGCTACCCGCAGTTGGAGCGAGCACAGTGGTaGCTGACCCAGCTTGGAGAGCTGTTAGAGACCCGA | + |
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Preference number: 3 (lower is better) Translates to: LLCYPQLERAQW*LTQLGELLETR Trigger: TCGGGTCTCTAACAGCTCTCCAAGCTGGGTCAGCCACCACTGTGCTCGCTCCAACTGCGGGTAGCACAGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| 3UTR CCA 72 bp | CCTCTCCTGTGCTACCCGCAGTTGGAGCGAGCACAGTaGTGGCTGACCCAGCTTGGAGAGCTGTTAGAGACC | + |
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Preference number: 3 (lower is better) Translates to: PLLCYPQLERAQ*WLTQLGELLET Trigger: GGTCTCTAACAGCTCTCCAAGCTGGGTCAGCCACCACTGTGCTCGCTCCAACTGCGGGTAGCACAGGAGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| 3UTR GCA 72 bp | AAGATGGAGGTGGGAGGAGCCGCAGAGCGGGCCAGATaGATGTTGGACAATCACCGTCAGAAGGTCCTCTCG | + |
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Preference number: 3 (lower is better) Translates to: KMEVGGAAERAR*MLDNHRQKVLS Trigger: CGAGAGGACCTTCTGACGGTGATTGTCCAACATGCATCTGGCCCGCTCTGCGGCTCCTCCCACCTCCATCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| 3UTR GCA 72 bp | CCCTCCCAGGAGGAAGCCCTTAGTATTGCTGACATCTaGCCTTATCCGTCCCTCCTCTCCTGTGCTACCCGC | + |
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Preference number: 3 (lower is better) Translates to: PSQEEALSIADI*PYPSLLSCATR Trigger: GCGGGTAGCACAGGAGAGGAGGGACGGATAAGGGCAGATGTCAGCAATACTAAGGGCTTCCTCCTGGGAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| 3UTR CCA 72 bp | AGGTGGGAGGAGCCGCAGAGCGGGCCAGATGCATGTTaGACAATCACCGTCAGAAGGTCCTCTCGCATTCTC | + |
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Preference number: 3 (lower is better) Translates to: RWEEPQSGPDAC*TITVRRSSRIL Trigger: GAGAATGCGAGAGGACCTTCTGACGGTGATTGTCCAACATGCATCTGGCCCGCTCTGCGGCTCCTCCCACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| 3UTR CCA 72 bp | ACTCAGTCTACCCCGCAGCAATGGCATCCCTCCGGCTaGGTCTCTCTCATTCTGCAGCTCTGTCTCTGGGTG | + |
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Preference number: 3 (lower is better) Translates to: TQSTPQQWHPSG*VSLILQLCLWV Trigger: CACCCAGAGACAGAGCTGCAGAATGAGAGAGACCCAGCCGGAGGGATGCCATTGCTGCGGGGTAGACTGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| 3UTR TCA 72 bp | CAGCCCCGTTCAGCAGGGATGGAAGTCACGAGACAATaGGTGGAACCTCATTCCCTCCCAGGAGGAAGCCCT | + |
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Preference number: 3 (lower is better) Translates to: QPRSAGMEVTRQ*VEPHSLPGGSP Trigger: AGGGCTTCCTCCTGGGAGGGAATGAGGTTCCACTCATTGTCTCGTGACTTCCATCCCTGCTGAACGGGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| 3UTR GCA 72 bp | TTGGAGGTAAGGACCTCCCTTAAGGAGCCTTGGCCTTaGAGCCCCGTTCAGCAGGGATGGAAGTCACGAGAC | + |
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Preference number: 3 (lower is better) Translates to: LEVRTSLKEPWP*SPVQQGWKSRD Trigger: GTCTCGTGACTTCCATCCCTGCTGAACGGGGCTGCAAGGCCAAGGCTCCTTAAGGGAGGTCCTTACCTCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| 3UTR CCA 72 bp | GCTGGGAACAGCCACCCACACTCCCTTGGCCACCGATaGAAGATACAGAGTTCGTTCGCCTTTCCAGTGCAG | + |
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Preference number: 3 (lower is better) Translates to: AGNSHPHSLGHR*KIQSSFAFPVQ Trigger: CTGCACTGGAAAGGCGAACGAACTCTGTATCTTCCATCGGTGGCCAAGGGAGTGTGGGTGGCTGTTCCCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| 3UTR GCA 72 bp | GATGCAAGCAGACATGGAGGCCTTGGCAGAGCGGTCTaGATTCTGGAGCAAAGCCCTCCAGTGGTGTTTTCC | + |
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Preference number: 3 (lower is better) Translates to: DASRHGGLGRAV*ILEQSPPVVFS Trigger: GGAAAACACCACTGGAGGGCTTTGCTCCAGAATGCAGACCGCTCTGCCAAGGCCTCCATGTCTGCTTGCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| 3UTR GCA 72 bp | GTTCGCCTTTCCAGTGCAGGCGTCTGGCAGCCACTGTaGTTCAGTCTCCAAGAAGTCTGCTGCCACATCAAG | + |
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Preference number: 3 (lower is better) Translates to: VRLSSAGVWQPL*FSLQEVCCHIK Trigger: CTTGATGTGGCAGCAGACTTCTTGGAGACTGAAGCACAGTGGCTGCCAGACGCCTGCACTGGAAAGGCGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| 3UTR CCA 72 bp | GAGGATAATAAGCCCGATGATAGGAGAAGATGGAGGTaGGAGGAGCCGCAGAGCGGGCCAGATGCATGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: EDNKPDDRRRWR*EEPQSGPDACW Trigger: CCAACATGCATCTGGCCCGCTCTGCGGCTCCTCCCACCTCCATCTTCTCCTATCATCGGGCTTATTATCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
||
| 3UTR CCA 72 bp | ACTGGATTGGAGGTAAGGACCTCCCTTAAGGAGCCTTaGCCTTGCAGCCCCGTTCAGCAGGGATGGAAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: TGLEVRTSLKEP*PCSPVQQGWKS Trigger: TGACTTCCATCCCTGCTGAACGGGGCTGCAAGGCCAAGGCTCCTTAAGGGAGGTCCTTACCTCCAATCCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
||
| 3UTR TCA 72 bp | GCTGGCAGCACTGCAGCCTCCCTGGTACCATTGGTCTaGCAGACACAGTTCCAGATAGTCTTGGTAGCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: AGSTAASLVPLV*QTQFQIVLVAA Trigger: AGCAGCTACCAAGACTATCTGGAACTGTGTCTGTCAGACCAATGGTACCAGGGAGGCTGCAGTGCTGCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
||
| 3UTR CCA 72 bp | AAGAGAGAGGATAATAAGCCCGATGATAGGAGAAGATaGAGGTGGGAGGAGCCGCAGAGCGGGCCAGATGCA | + |
|
Preference number: 3 (lower is better) Translates to: KREDNKPDDRRR*RWEEPQSGPDA Trigger: TGCATCTGGCCCGCTCTGCGGCTCCTCCCACCTCCATCTTCTCCTATCATCGGGCTTATTATCCTCTCTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
||
| 3UTR CCA 72 bp | CCCGTTCAGCAGGGATGGAAGTCACGAGACAATGAGTaGAACCTCATTCCCTCCCAGGAGGAAGCCCTTAGT | + |
|
Preference number: 3 (lower is better) Translates to: PVQQGWKSRDNE*NLIPSQEEALS Trigger: ACTAAGGGCTTCCTCCTGGGAGGGAATGAGGTTCCACTCATTGTCTCGTGACTTCCATCCCTGCTGAACGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
||
| 3UTR-3UTR CAA 90 bp | TGCCCAGGAAGGACACAGGGACTAGCGGAGGATGAAGCCCATCCCTTGCAGATGAGTGTCCAGAGCCGGTaGAATGGATTTCATGTAAGG | + |
|
Preference number: 3 (lower is better) Translates to: CPGRTQGLAEDEAHPLQMSVQSR*NGFHVR Trigger: CCTTACATGAAATCCATTCAACCGGCTCTGGACACT...CATCTGCAAGGGATGGGCTTCATCCTCCGCTAGTCCCTGTGTCCTTCCTGGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
||
| 3UTR CCA 72 bp | AGAAAGTGTCTGACAGAGTCAGGACCCTTGAAAAGCTaGCAGCACTGCAGCCTCCCTGGTACCATTGGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: RKCLTESGPLKS*QHCSLPGTIGL Trigger: CAGACCAATGGTACCAGGGAGGCTGCAGTGCTGCCAGCTTTTCAAGGGTCCTGACTCTGTCAGACACTTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
||
| 3UTR-3UTR CAA 90 bp | CAGCAGGGATGGAAGTCACGAGACAATGAGTGGAACCTCATTCCCTCCCAGGAGGACTCTCCCATGTACTaGTGCCTTCTTCAGAATGGG | + |
|
Preference number: 3 (lower is better) Translates to: QQGWKSRDNEWNLIPSQEDSPMY*CLLQNG Trigger: CCCATTCTGAAGAAGGCACAAGTACATGGGAGAGTC...CTCCTGGGAGGGAATGAGGTTCCACTCATTGTCTCGTGACTTCCATCCCTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
||
| 3UTR CCA 72 bp | GCAGAGCGGTCTGCATTCTGGAGCAAAGCCCTCCAGTaGTGTTTTCCAAGAGTCCAAACAACTGGCATCATA | + |
|
Preference number: 3 (lower is better) Translates to: AERSAFWSKALQ*CFPRVQTTGII Trigger: TATGATGCCAGTTGTTTGGACTCTTGGAAAACACCACTGGAGGGCTTTGCTCCAGAATGCAGACCGCTCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
||
| 3UTR-3UTR CAA 90 bp | TCTGACAGAGTCAGGACCCTTGAAAAGCTGGCAGCACTGCAGCCTCCCTGGTACTTAAAAGCCAGACTCTaGTCCCTCGCAGAAATAAAA | + |
|
Preference number: 3 (lower is better) Translates to: SDRVRTLEKLAALQPPWYLKARL*SLAEIK Trigger: TTTTATTTCTGCGAGGGACAAGAGTCTGGCTTTTAA...GTACCAGGGAGGCTGCAGTGCTGCCAGCTTTTCAAGGGTCCTGACTCTGTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
||
| 3UTR GCA 72 bp | AGGATGAAGCCCATCCCTTGCAGATGGGGGTACCCATaGTTTGATGATGTTCACAGAGGGCTTCTTTGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: RMKPIPCRWGYP*FDDVHRGLLWK Trigger: TTTCCAAAGAAGCCCTCTGTGAACATCATCAAAGCATGGGTACCCCCATCTGCAAGGGATGGGCTTCATCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
||
| 3UTR GCA 72 bp | CCAGGAGAAGTAAGGCAGGACTCTCCCATGTACTTGTaGCTTCTTCAGAATGGGGCGCAGTCTTTTAGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: PGEVRQDSPMYL*LLQNGAQSFSF Trigger: AAAGCTAAAAGACTGCGCCCCATTCTGAAGAAGGCACAAGTACATGGGAGAGTCCTGCCTTACTTCTCCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
||
| 3UTR CCA 72 bp | CTTGTCCCTCGCAGAAATAAAAAGAATAGCCCTGCCTaGAAGTCTCGTCTTTCTCCCCTTTCACACACAGCC | + |
|
Preference number: 3 (lower is better) Translates to: LVPRRNKKNSPA*KSRLSPLSHTA Trigger: GGCTGTGTGTGAAAGGGGAGAAAGACGAGACTTCCAGGCAGGGCTATTCTTTTTATTTCTGCGAGGGACAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
||
| 3UTR-3UTR CAA 90 bp | ACTTGGGCACCTGTGCTCAACATTCAGTACCACAGATATTTTACCAAGCACCTACACAAAGATCTATCTTaGTGCAAGCTAGATGCAAGC | + |
|
Preference number: 3 (lower is better) Translates to: TWAPVLNIQYHRYFTKHLHKDLS*CKLDAS Trigger: GCTTGCATCTAGCTTGCACAAAGATAGATCTTTGTG...TAGGTGCTTGGTAAAATATCTGTGGTACTGAATGTTGAGCACAGGTGCCCAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
||
| 3UTR GCA 72 bp | TTTCCAAGAGTCCAAACAACTGGCATCATACACATTTaGAAAGGTGCACCTTGTACCACAGATGTCCTTAGT | + |
|
Preference number: 3 (lower is better) Translates to: FPRVQTTGIIHI*KGAPCTTDVLS Trigger: ACTAAGGACATCTGTGGTACAAGGTGCACCTTTGCAAATGTGTATGATGCCAGTTGTTTGGACTCTTGGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
||
| 3UTR TCA 72 bp | TACCTTCTTCCAGAGCTTCTTAAAACTCCACACAGATaGTCTCACCACAAAGATCTATCTTTGTGCAAGCTA | + |
|
Preference number: 3 (lower is better) Translates to: YLLPELLKTPHR*SHHKDLSLCKL Trigger: TAGCTTGCACAAAGATAGATCTTTGTGGTGAGATCATCTGTGTGGAGTTTTAAGAAGCTCTGGAAGAAGGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
||
| CDS-3UTR CCA 90 bp | GGAGGTGGGAGGAGCCGCAGAGCGGGCCAGATGCATGTTGGACAATCACCGTCAGCTGGGCTCTGTCCCTaGATGGAGATGGCCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: GGGRSRRAGQMHVGQSPSAGLCP*MEMACT Trigger: TGTGCAGGCCATCTCCATCCAGGGACAGAGCCCAGC...TGACGGTGATTGTCCAACATGCATCTGGCCCGCTCTGCGGCTCCTCCCACCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
||
| CDS-3UTR CCA 90 bp | GGAGGTGGGAGGAGCCGCAGAGCGGGCCAGATGCATGTTGGACAATCACCGTCAAGAGCACAGGCTCACTaGCTGGGCTCTGTCCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GGGRSRRAGQMHVGQSPSRAQAH*LGSVPG Trigger: TCCAGGGACAGAGCCCAGCCAGTGAGCCTGTGCTCT...TGACGGTGATTGTCCAACATGCATCTGGCCCGCTCTGCGGCTCCTCCCACCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
||
| 3UTR CAA 72 bp | CCCTTATCCGTCCCTCCTCTCCTGTGCTACCCGCAGTaGGAGCGAGCACAGTGGTGGCTGACCCAGCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PLSVPPLLCYPQ*ERAQWWLTQLG Trigger: TCCAAGCTGGGTCAGCCACCACTGTGCTCGCTCCAACTGCGGGTAGCACAGGAGAGGAGGGACGGATAAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
||
| CDS-3UTR GCA 90 bp | TGCCCAGGAAGGACACAGGGACTAGCGGAGGATGAAGCCCATCCCTTGCAGATGTCCCCCGTTCGCAGCTaGTGGTTCCTCCCCATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CPGRTQGLAEDEAHPLQMSPVRS*WFLPIS Trigger: GGAGATGGGGAGGAACCAGCAGCTGCGAACGGGGGA...CATCTGCAAGGGATGGGCTTCATCCTCCGCTAGTCCCTGTGTCCTTCCTGGGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
||
| 3UTR CAA 72 bp | GAGGTGGGAGGAGCCGCAGAGCGGGCCAGATGCATGTaGGACAATCACCGTCAGAAGGTCCTCTCGCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: EVGGAAERARCM*DNHRQKVLSHS Trigger: AGAATGCGAGAGGACCTTCTGACGGTGATTGTCCAACATGCATCTGGCCCGCTCTGCGGCTCCTCCCACCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
||
| 3UTR CAA 72 bp | CTGAGTGGCCCAGATGTGAGTCCTGTGCCAAGAGCCTaGGCACTCAGTCTACCCCGCAGCAATGGCATCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LSGPDVSPVPRA*ALSLPRSNGIP Trigger: AGGGATGCCATTGCTGCGGGGTAGACTGAGTGCCAAGGCTCTTGGCACAGGACTCACATCTGGGCCACTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
||
| CDS-3UTR TCA 90 bp | CAGCAGGGATGGAAGTCACGAGACAATGAGTGGAACCTCATTCCCTCCCAGGAGCCAGGACATCCCAGCTaGCCACGGCAGAGTTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QQGWKSRDNEWNLIPSQEPGHPS*PRQSWP Trigger: AGGCCAACTCTGCCGTGGTCAGCTGGGATGTCCTGG...CTCCTGGGAGGGAATGAGGTTCCACTCATTGTCTCGTGACTTCCATCCCTGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
||
| CDS-3UTR TCA 90 bp | TCTGACAGAGTCAGGACCCTTGAAAAGCTGGCAGCACTGCAGCCTCCCTGGTACGTGGTGTTCACCTCCTaGATGAACCGGAGCATCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SDRVRTLEKLAALQPPWYVVFTS*MNRSIR Trigger: GCGGATGCTCCGGTTCATTCAGGAGGTGAACACCAC...GTACCAGGGAGGCTGCAGTGCTGCCAGCTTTTCAAGGGTCCTGACTCTGTCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
||
| CDS-3UTR GCA 90 bp | TGCCCAGGAAGGACACAGGGACTAGCGGAGGATGAAGCCCATCCCTTGCAGATGCCTGATGCTCCGGTGTaGTGGTTTCTGATGCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CPGRTQGLAEDEAHPLQMPDAPV*WFLMRS Trigger: AGAGCGCATCAGAAACCAGCACACCGGAGCATCAGG...CATCTGCAAGGGATGGGCTTCATCCTCCGCTAGTCCCTGTGTCCTTCCTGGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
||
| CDS-3UTR TCA 90 bp | AGAAGTAAGGCAGGACTCTCCCATGTACTTGTGCCTTCTTCAGAATGGGGCGCAAGGAGACCCCCACCCTaGTGCTCCGGTGTGCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: RSKAGLSHVLVPSSEWGARRPPP*CSGVLV Trigger: AACCAGCACACCGGAGCATCAGGGTGGGGGTCTCCT...TGCGCCCCATTCTGAAGAAGGCACAAGTACATGGGAGAGTCCTGCCTTACTTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
||
| CDS-3UTR GCA 90 bp | GCTCTAACTGGATTGGAGGTAAGGACCTCCCTTAAGGAGCCTTGGCCTTGCAGCGAGTTGGCCTTGAGGTaGCGGACGGTCACGTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: ALTGLEVRTSLKEPWPCSELALR*RTVTFT Trigger: TGTGAACGTGACCGTCCGGCACCTCAAGGCCAACTC...GCTGCAAGGCCAAGGCTCCTTAAGGGAGGTCCTTACCTCCAATCCAGTTAGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
||
| CDS-3UTR TCA 90 bp | TCTGACAGAGTCAGGACCCTTGAAAAGCTGGCAGCACTGCAGCCTCCCTGGTACTGTTCACCTCCTGAATaGACCGGAGCATCCGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: SDRVRTLEKLAALQPPWYCSPPE*TGASAH Trigger: ATGTGCGGATGCTCCGGTTCATTCAGGAGGTGAACA...GTACCAGGGAGGCTGCAGTGCTGCCAGCTTTTCAAGGGTCCTGACTCTGTCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
||
| CDS-3UTR CCA 90 bp | GCTCTAACTGGATTGGAGGTAAGGACCTCCCTTAAGGAGCCTTGGCCTTGCAGCGATGCTCCGGTGTGCTaGTTTCTGATGCGCTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ALTGLEVRTSLKEPWPCSDAPVC*FLMRSW Trigger: CCAAGAGCGCATCAGAAACCAGCACACCGGAGCATC...GCTGCAAGGCCAAGGCTCCTTAAGGGAGGTCCTTACCTCCAATCCAGTTAGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
||
| 3UTR CAA 72 bp | ACCTACTATGTGCTGGGAACAGCCACCCACACTCCCTaGGCCACCGATGGAAGATACAGAGTTCGTTCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TYYVLGTATHTP*ATDGRYRVRSP Trigger: AGGCGAACGAACTCTGTATCTTCCATCGGTGGCCAAGGGAGTGTGGGTGGCTGTTCCCAGCACATAGTAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
||
| 3UTR CAA 72 bp | GGAGAGCTGTTAGAGACCCGAATGAAGGGGCAGTCATaGGGTGATGGCTTTCAGCTCTCTGACTTGGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: GELLETRMKGQS*GDGFQLSDLGT Trigger: GGTGCCCAAGTCAGAGAGCTGAAAGCCATCACCCAATGACTGCCCCTTCATTCGGGTCTCTAACAGCTCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
||
| 3UTR CAA 72 bp | GGAACCTCATTCCCTCCCAGGAGGAAGCCCTTAGTATaGCTGACATCTGCCCTTATCCGTCCCTCCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GTSFPPRRKPLV*LTSALIRPSSP Trigger: AGGAGAGGAGGGACGGATAAGGGCAGATGTCAGCAATACTAAGGGCTTCCTCCTGGGAGGGAATGAGGTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
||
| CDS-3UTR CCA 90 bp | AATCACCGTCAGAAGGTCCTCTCGCATTCTCTACTGTCTTCTGAGCTGCTCAGACACAGGCTCACTGGCTaGGCTCTGTCCCTGGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: NHRQKVLSHSLLSSELLRHRLTG*ALSLDG Trigger: TCCATCCAGGGACAGAGCCCAGCCAGTGAGCCTGTG...TCTGAGCAGCTCAGAAGACAGTAGAGAATGCGAGAGGACCTTCTGACGGTGATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
||
| CDS-3UTR TCA 90 bp | GCTCTAACTGGATTGGAGGTAAGGACCTCCCTTAAGGAGCCTTGGCCTTGCAGCAGATGGCAAAGCCAATaGCCACTTCATCCTCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ALTGLEVRTSLKEPWPCSRWQSQ*PLHPPG Trigger: TCCTGGAGGATGAAGTGGTCATTGGCTTTGCCATCT...GCTGCAAGGCCAAGGCTCCTTAAGGGAGGTCCTTACCTCCAATCCAGTTAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
||
| CDS-3UTR TCA 90 bp | CACCTGTGCTCAACATTCAGTACCACAGATATTTTACCAAGCACCTACTATGTGCGGCAGAGTTGGCCTTaGGGTGCCGGACGGTCACGT | + |
|
Preference number: 4 (lower is better) Translates to: HLCSTFSTTDILPSTYYVRQSWP*GAGRSR Trigger: ACGTGACCGTCCGGCACCTCAAGGCCAACTCTGCCG...CACATAGTAGGTGCTTGGTAAAATATCTGTGGTACTGAATGTTGAGCACAGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
||
| CDS-3UTR TCA 90 bp | ACTTGGGCACCTGTGCTCAACATTCAGTACCACAGATATTTTACCAAGCACCTACCTCGCGTGGGGTCTTaGAGAGCACAGGCTCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: TWAPVLNIQYHRYFTKHLPRVGS*RAQAHW Trigger: CCAGTGAGCCTGTGCTCTTCAAGACCCCACGCGAGG...TAGGTGCTTGGTAAAATATCTGTGGTACTGAATGTTGAGCACAGGTGCCCAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
||
| CDS-3UTR TCA 90 bp | TCTGACAGAGTCAGGACCCTTGAAAAGCTGGCAGCACTGCAGCCTCCCTGGTACCTCATCTTTGTTCTTTaGGGCCATCTTTTCAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SDRVRTLEKLAALQPPWYLIFVL*GHLFSL Trigger: GAGGCTGAAAAGATGGCCTCAAAGAACAAAGATGAG...GTACCAGGGAGGCTGCAGTGCTGCCAGCTTTTCAAGGGTCCTGACTCTGTCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
||
| CDS-3UTR CCA 90 bp | AGGACTCTCCCATGTACTTGTGCCTTCTTCAGAATGGGGCGCAGTCTTTTAGCTCTTTTCAGCCTCGCGTaGGGTCTTGAAGAGCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: RTLPCTCAFFRMGRSLLALFSLA*GLEEHR Trigger: CCTGTGCTCTTCAAGACCCCACGCGAGGCTGAAAAG...AGCTAAAAGACTGCGCCCCATTCTGAAGAAGGCACAAGTACATGGGAGAGTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
||
| CDS-3UTR TCA 90 bp | AGGACTCTCCCATGTACTTGTGCCTTCTTCAGAATGGGGCGCAGTCTTTTAGCTCGGTGTGCTGGTTTCTaGTGCGCTCTTGGTTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RTLPCTCAFFRMGRSLLARCAGF*CALGFL Trigger: GAGAAAACCAAGAGCGCATCAGAAACCAGCACACCG...AGCTAAAAGACTGCGCCCCATTCTGAAGAAGGCACAAGTACATGGGAGAGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
||
| 3UTR CAA 72 bp | AGTCCAGGAGAAGTAAGGCAGGACTCTCCCATGTACTaGTGCCTTCTTCAGAATGGGGCGCAGTCTTTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SPGEVRQDSPMY*CLLQNGAQSFS Trigger: GCTAAAAGACTGCGCCCCATTCTGAAGAAGGCACAAGTACATGGGAGAGTCCTGCCTTACTTCTCCTGGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
||
| CDS-3UTR CCA 90 bp | CACCTGTGCTCAACATTCAGTACCACAGATATTTTACCAAGCACCTACTATGTGGGCTCTGTCCCTGGATaGAGATGGCCTGCACATGGA | + |
|
Preference number: 4 (lower is better) Translates to: HLCSTFSTTDILPSTYYVGSVPG*RWPAHG Trigger: TCCATGTGCAGGCCATCTCCATCCAGGGACAGAGCC...CACATAGTAGGTGCTTGGTAAAATATCTGTGGTACTGAATGTTGAGCACAGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
||
| CDS-3UTR CCA 90 bp | TCTGACAGAGTCAGGACCCTTGAAAAGCTGGCAGCACTGCAGCCTCCCTGGTACTTTCTGATGCGCTCTTaGTTTTCTCCTTGTTGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: SDRVRTLEKLAALQPPWYFLMRS*FSPCCY Trigger: ATAACAACAAGGAGAAAACCAAGAGCGCATCAGAAA...GTACCAGGGAGGCTGCAGTGCTGCCAGCTTTTCAAGGGTCCTGACTCTGTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
||
| CDS-3UTR TCA 90 bp | CCTCGCAGAAATAAAAAGAATAGCCCTGCCTGGAAGTCTCGTCTTTCTCCCCTTACATCCTTCTTCTGCTaGGAGATGGCAAAGCCAATG | + |
|
Preference number: 4 (lower is better) Translates to: PRRNKKNSPAWKSRLSPLTSFFC*EMAKPM Trigger: CATTGGCTTTGCCATCTCTCAGCAGAAGAAGGATGT...AAGGGGAGAAAGACGAGACTTCCAGGCAGGGCTATTCTTTTTATTTCTGCGAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
||
| CDS-3UTR CCA 90 bp | AATCACCGTCAGAAGGTCCTCTCGCATTCTCTACTGTCTTCTGAGCTGCTCAGATCCCCATCTCCTTCATaGTCACCTCATCTTTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NHRQKVLSHSLLSSELLRSPSPS*SPHLCS Trigger: AGAACAAAGATGAGGTGACCATGAAGGAGATGGGGA...TCTGAGCAGCTCAGAAGACAGTAGAGAATGCGAGAGGACCTTCTGACGGTGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
||
| CDS-3UTR CCA 90 bp | CACCTGTGCTCAACATTCAGTACCACAGATATTTTACCAAGCACCTACTATGTGTTGATGATATCATACTaGCGGCAGAAGAGAGCTATA | + |
|
Preference number: 4 (lower is better) Translates to: HLCSTFSTTDILPSTYYVLMISY*RQKRAI Trigger: TATAGCTCTCTTCTGCCGCCAGTATGATATCATCAA...CACATAGTAGGTGCTTGGTAAAATATCTGTGGTACTGAATGTTGAGCACAGGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
||
| CDS-3UTR CAA 90 bp | GGAGGTGGGAGGAGCCGCAGAGCGGGCCAGATGCATGTTGGACAATCACCGTCAACGGCAGAGTTGGCCTaGAGGTGCCGGACGGTCACG | + |
|
Preference number: 5 (lower is better) Translates to: GGGRSRRAGQMHVGQSPSTAELA*RCRTVT Trigger: CGTGACCGTCCGGCACCTCAAGGCCAACTCTGCCGT...TGACGGTGATTGTCCAACATGCATCTGGCCCGCTCTGCGGCTCCTCCCACCTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
||
| CDS CCA 90 bp | CGTGGGGTCTTGAAGAGCACAGGCTCACTGGCTGGGCTCTGTCCCTaGATGGAGATGGCCTGCACATGGACGATATATTCTGTGTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RGVLKSTGSLAGLCP*MEMACTWTIYSVSS Trigger: GGAGGACACAGAATATATCGTCCATGTGCAGGCCATCTCCATCCAGGGACAGAGCCCAGCCAGTGAGCCTGTGCTCTTCAAGACCCCACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
||
| CDS CCA 90 bp | CTTTTCAGCCTCGCGTGGGGTCTTGAAGAGCACAGGCTCACTGGCTaGGCTCTGTCCCTGGATGGAGATGGCCTGCACATGGACGATATA | + |
|
Preference number: 5 (lower is better) Translates to: LFSLAWGLEEHRLTG*ALSLDGDGLHMDDI Trigger: TATATCGTCCATGTGCAGGCCATCTCCATCCAGGGACAGAGCCCAGCCAGTGAGCCTGTGCTCTTCAAGACCCCACGCGAGGCTGAAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
||
| CDS TCA 90 bp | GCTGCGGAGGAGACCCCCACCCTGATGCTCCGGTGTGCTGGTTTCTaGTGCGCTCTTGGTTTTCTCCTTGTTGTTATTGGGCTCGTTGTC | + |
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Preference number: 5 (lower is better) Translates to: AAEETPTLMLRCAGF*CALGFLLVVIGLVV Trigger: GACAACGAGCCCAATAACAACAAGGAGAAAACCAAGAGCGCATCAGAAACCAGCACACCGGAGCATCAGGGTGGGGGTCTCCTCCGCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| CDS-3UTR CAA 90 bp | ATGCATGTTGGACAATCACCGTCAGAAGGTCCTCTCGCATTCTCTACTGTCTTCCTGACCACGGCAGAGTaGGCCTTGAGGTGCCGGACG | + |
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Preference number: 5 (lower is better) Translates to: MHVGQSPSEGPLAFSTVFLTTAE*ALRCRT Trigger: CGTCCGGCACCTCAAGGCCAACTCTGCCGTGGTCAG...GAAGACAGTAGAGAATGCGAGAGGACCTTCTGACGGTGATTGTCCAACATGCAT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| CDS-3UTR CAA 90 bp | AGGACTCTCCCATGTACTTGTGCCTTCTTCAGAATGGGGCGCAGTCTTTTAGCTGCCTCGCGTGGGGTCTaGAAGAGCACAGGCTCACTG | + |
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Preference number: 5 (lower is better) Translates to: RTLPCTCAFFRMGRSLLAASRGV*KSTGSL Trigger: CAGTGAGCCTGTGCTCTTCAAGACCCCACGCGAGGC...AGCTAAAAGACTGCGCCCCATTCTGAAGAAGGCACAAGTACATGGGAGAGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| CDS GCA 90 bp | ATGAAGAGGACCACAACAATGATCAGCACCTCCCCCGTTCGCAGCTaGTGGTTCCTCCCCATCTCCTTCATGGTCACCTCATCTTTGTTC | + |
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Preference number: 5 (lower is better) Translates to: MKRTTTMISTSPVRS*WFLPISFMVTSSLF Trigger: GAACAAAGATGAGGTGACCATGAAGGAGATGGGGAGGAACCAGCAGCTGCGAACGGGGGAGGTGCTGATCATTGTTGTGGTCCTCTTCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| CDS CCA 90 bp | ATATCTTGCTGCGGAGGAGACCCCCACCCTGATGCTCCGGTGTGCTaGTTTCTGATGCGCTCTTGGTTTTCTCCTTGTTGTTATTGGGCT | + |
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Preference number: 5 (lower is better) Translates to: ISCCGGDPHPDAPVC*FLMRSWFSPCCYWA Trigger: AGCCCAATAACAACAAGGAGAAAACCAAGAGCGCATCAGAAACCAGCACACCGGAGCATCAGGGTGGGGGTCTCCTCCGCAGCAAGATAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| CDS-3UTR CAA 90 bp | GCTCTAACTGGATTGGAGGTAAGGACCTCCCTTAAGGAGCCTTGGCCTTGCAGCTTGGGCTCGTTGTCCTaGATGATATCATACTGGCGG | + |
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Preference number: 5 (lower is better) Translates to: ALTGLEVRTSLKEPWPCSLGSLS*MISYWR Trigger: CCGCCAGTATGATATCATCAAGGACAACGAGCCCAA...GCTGCAAGGCCAAGGCTCCTTAAGGGAGGTCCTTACCTCCAATCCAGTTAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| CDS CCA 90 bp | AAGAGGACCACAACAATGATCAGCACCTCCCCCGTTCGCAGCTGCTaGTTCCTCCCCATCTCCTTCATGGTCACCTCATCTTTGTTCTTT | + |
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Preference number: 5 (lower is better) Translates to: KRTTTMISTSPVRSC*FLPISFMVTSSLFF Trigger: AAAGAACAAAGATGAGGTGACCATGAAGGAGATGGGGAGGAACCAGCAGCTGCGAACGGGGGAGGTGCTGATCATTGTTGTGGTCCTCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| CDS-3UTR CAA 90 bp | AGAAGTAAGGCAGGACTCTCCCATGTACTTGTGCCTTCTTCAGAATGGGGCGCATTCTCCTTGTTGTTATaGGGCTCGTTGTCCTTGATG | + |
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Preference number: 5 (lower is better) Translates to: RSKAGLSHVLVPSSEWGAFSLLL*GSLSLM Trigger: CATCAAGGACAACGAGCCCAATAACAACAAGGAGAA...TGCGCCCCATTCTGAAGAAGGCACAAGTACATGGGAGAGTCCTGCCTTACTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| CDS-3UTR CAA 90 bp | AGGACTCTCCCATGTACTTGTGCCTTCTTCAGAATGGGGCGCAGTCTTTTAGCTCCTCATCTTTGTTCTTaGAGGCCATCTTTTCAGCCT | + |
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Preference number: 5 (lower is better) Translates to: RTLPCTCAFFRMGRSLLAPHLCS*RPSFQP Trigger: AGGCTGAAAAGATGGCCTCAAAGAACAAAGATGAGG...AGCTAAAAGACTGCGCCCCATTCTGAAGAAGGCACAAGTACATGGGAGAGTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| CDS-3UTR CAA 90 bp | AGAAGTAAGGCAGGACTCTCCCATGTACTTGTGCCTTCTTCAGAATGGGGCGCAATGGTCACCTCATCTTaGTTCTTTGAGGCCATCTTT | + |
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Preference number: 5 (lower is better) Translates to: RSKAGLSHVLVPSSEWGAMVTSS*FFEAIF Trigger: AAAGATGGCCTCAAAGAACAAAGATGAGGTGACCAT...TGCGCCCCATTCTGAAGAAGGCACAAGTACATGGGAGAGTCCTGCCTTACTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| CDS-3UTR CAA 90 bp | AGGACTCTCCCATGTACTTGTGCCTTCTTCAGAATGGGGCGCAGTCTTTTAGCTGTTTCTGATGCGCTCTaGGTTTTCTCCTTGTTGTTA | + |
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Preference number: 5 (lower is better) Translates to: RTLPCTCAFFRMGRSLLAVSDAL*VFSLLL Trigger: TAACAACAAGGAGAAAACCAAGAGCGCATCAGAAAC...AGCTAAAAGACTGCGCCCCATTCTGAAGAAGGCACAAGTACATGGGAGAGTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| CDS-3UTR CAA 90 bp | TTTGCAAAGGTGCACCTTGTACCACAGATGTCCTTAGTGGCTGAATCCAGAAAGTTGGTTTTCTCCTTGTaGTTATTGGGCTCGTTGTCC | + |
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Preference number: 5 (lower is better) Translates to: FAKVHLVPQMSLVAESRKLVFSL*LLGSLS Trigger: GGACAACGAGCCCAATAACAACAAGGAGAAAACCAA...CTTTCTGGATTCAGCCACTAAGGACATCTGTGGTACAAGGTGCACCTTTGCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| CDS-3UTR CAA 90 bp | TTTGCAAAGGTGCACCTTGTACCACAGATGTCCTTAGTGGCTGAATCCAGAAAGCTCTTGGTTTTCTCCTaGTTGTTATTGGGCTCGTTG | + |
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Preference number: 5 (lower is better) Translates to: FAKVHLVPQMSLVAESRKLLVFS*LLLGSL Trigger: CAACGAGCCCAATAACAACAAGGAGAAAACCAAGAG...CTTTCTGGATTCAGCCACTAAGGACATCTGTGGTACAAGGTGCACCTTTGCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| CDS GCA 72 bp | ACATCCCAGCTGACCACGGCAGAGTTGGCCTTGAGGTaGCGGACGGTCACGTTCACAGGGGCTGAGGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: TSQLTTAELALR*RTVTFTGAEGL Trigger: CAGCCCCTCAGCCCCTGTGAACGTGACCGTCCGGCACCTCAAGGCCAACTCTGCCGTGGTCAGCTGGGATGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| CDS CCA 72 bp | CTCGCGTGGGGTCTTGAAGAGCACAGGCTCACTGGCTaGGCTCTGTCCCTGGATGGAGATGGCCTGCACATG | + |
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Preference number: 6 (lower is better) Translates to: LAWGLEEHRLTG*ALSLDGDGLHM Trigger: CATGTGCAGGCCATCTCCATCCAGGGACAGAGCCCAGCCAGTGAGCCTGTGCTCTTCAAGACCCCACGCGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| CDS GCA 72 bp | TGCTGCGGAGGAGACCCCCACCCTGATGCTCCGGTGTaGTGGTTTCTGATGCGCTCTTGGTTTTCTCCTTGT | + |
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Preference number: 6 (lower is better) Translates to: CCGGDPHPDAPV*WFLMRSWFSPC Trigger: ACAAGGAGAAAACCAAGAGCGCATCAGAAACCAGCACACCGGAGCATCAGGGTGGGGGTCTCCTCCGCAGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| CDS CAA 72 bp | TTCTTTGAGGCCATCTTTTCAGCCTCGCGTGGGGTCTaGAAGAGCACAGGCTCACTGGCTGGGCTCTGTCCC | + |
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Preference number: 6 (lower is better) Translates to: FFEAIFSASRGV*KSTGSLAGLCP Trigger: GGGACAGAGCCCAGCCAGTGAGCCTGTGCTCTTCAAGACCCCACGCGAGGCTGAAAAGATGGCCTCAAAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| CDS GCA 72 bp | ACCACAACAATGATCAGCACCTCCCCCGTTCGCAGCTaGTGGTTCCTCCCCATCTCCTTCATGGTCACCTCA | + |
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Preference number: 6 (lower is better) Translates to: TTTMISTSPVRS*WFLPISFMVTS Trigger: TGAGGTGACCATGAAGGAGATGGGGAGGAACCAGCAGCTGCGAACGGGGGAGGTGCTGATCATTGTTGTGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| CDS CCA 72 bp | TGCGGAGGAGACCCCCACCCTGATGCTCCGGTGTGCTaGTTTCTGATGCGCTCTTGGTTTTCTCCTTGTTGT | + |
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Preference number: 6 (lower is better) Translates to: CGGDPHPDAPVC*FLMRSWFSPCC Trigger: ACAACAAGGAGAAAACCAAGAGCGCATCAGAAACCAGCACACCGGAGCATCAGGGTGGGGGTCTCCTCCGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| CDS TCA 72 bp | GAGACCCCCACCCTGATGCTCCGGTGTGCTGGTTTCTaGTGCGCTCTTGGTTTTCTCCTTGTTGTTATTGGG | + |
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Preference number: 6 (lower is better) Translates to: ETPTLMLRCAGF*CALGFLLVVIG Trigger: CCCAATAACAACAAGGAGAAAACCAAGAGCGCATCAGAAACCAGCACACCGGAGCATCAGGGTGGGGGTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| CDS CAA 90 bp | GATGCGCTCTTGGTTTTCTCCTTGTTGTTATTGGGCTCGTTGTCCTaGATGATATCATACTGGCGGCAGAAGAGAGCTATAACACCTGCC | + |
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Preference number: 6 (lower is better) Translates to: DALLVFSLLLLGSLS*MISYWRQKRAITPA Trigger: GGCAGGTGTTATAGCTCTCTTCTGCCGCCAGTATGATATCATCAAGGACAACGAGCCCAATAACAACAAGGAGAAAACCAAGAGCGCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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| CDS CAA 72 bp | TTGGTTTTCTCCTTGTTGTTATTGGGCTCGTTGTCCTaGATGATATCATACTGGCGGCAGAAGAGAGCTATA | + |
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Preference number: 6 (lower is better) Translates to: LVFSLLLLGSLS*MISYWRQKRAI Trigger: TATAGCTCTCTTCTGCCGCCAGTATGATATCATCAAGGACAACGAGCCCAATAACAACAAGGAGAAAACCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102600.4 |
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