Pregenerated sensors for FNDC4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038552Ensembl transcript IDs: ENSMUST00000041266.11, ENSMUST00000172435.8, ENSMUST00000201417.2, ENSMUST00000202158.4, ENSMUST00000202615.4
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGAGGATGGGTACCAGCCTGGGATTCTGGGAGCATACTGCCTTGTaGGAGTCTCAAGCGGGTCACCATCTTAGGCTTTCCTGCCCCCGC | + |
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Preference number: 1 (lower is better) Translates to: KRMGTSLGFWEHTAL*ESQAGHHLRLSCPR Trigger: GCGGGGGCAGGAAAGCCTAAGATGGTGACCCGCTTGAGACTCCCACAAGGCAGTATGCTCCCAGAATCCCAGGCTGGTACCCATCCTCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172435.8 |
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| 3UTR CCA 90 bp | GGCCCTGCTTACAGTGGAAAGAGGATGGGTACCAGCCTGGGATTCTaGGAGCATACTGCCTTGTGGGAGTCTCAAGCGGGTCACCATCTT | + |
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Preference number: 1 (lower is better) Translates to: GPAYSGKRMGTSLGF*EHTALWESQAGHHL Trigger: AAGATGGTGACCCGCTTGAGACTCCCACAAGGCAGTATGCTCCCAGAATCCCAGGCTGGTACCCATCCTCTTTCCACTGTAAGCAGGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172435.8 |
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| 3UTR GCA 90 bp | GTCACCATCTTAGGCTTTCCTGCCCCCGCCCCCTTACTCATACAGTaGATCCTCACAGTGCATCCTCTCTTCTGGTTCTGGTTCTTCATC | + |
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Preference number: 1 (lower is better) Translates to: VTILGFPAPAPLLIQ*ILTVHPLFWFWFFI Trigger: GATGAAGAACCAGAACCAGAAGAGAGGATGCACTGTGAGGATGCACTGTATGAGTAAGGGGGCGGGGGCAGGAAAGCCTAAGATGGTGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000172435.8 |
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| 3UTR GCA 90 bp | CCCAAGTCCAGGGATACAGAATCTACCAGACCTACATTCTGGCCCTaGTTACAGTGGAAAGAGGATGGGTACCAGCCTGGGATTCTGGGA | + |
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Preference number: 1 (lower is better) Translates to: PKSRDTESTRPTFWP*LQWKEDGYQPGILG Trigger: TCCCAGAATCCCAGGCTGGTACCCATCCTCTTTCCACTGTAAGCAGGGCCAGAATGTAGGTCTGGTAGATTCTGTATCCCTGGACTTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172435.8 |
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| 3UTR CCA 90 bp | ATCTACCAGACCTACATTCTGGCCCTGCTTACAGTGGAAAGAGGATaGGTACCAGCCTGGGATTCTGGGAGCATACTGCCTTGTGGGAGT | + |
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Preference number: 1 (lower is better) Translates to: IYQTYILALLTVERG*VPAWDSGSILPCGS Trigger: ACTCCCACAAGGCAGTATGCTCCCAGAATCCCAGGCTGGTACCCATCCTCTTTCCACTGTAAGCAGGGCCAGAATGTAGGTCTGGTAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172435.8 |
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| 3UTR CCA 90 bp | AGGGATACAGAATCTACCAGACCTACATTCTGGCCCTGCTTACAGTaGAAAGAGGATGGGTACCAGCCTGGGATTCTGGGAGCATACTGC | + |
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Preference number: 1 (lower is better) Translates to: RDTESTRPTFWPCLQ*KEDGYQPGILGAYC Trigger: GCAGTATGCTCCCAGAATCCCAGGCTGGTACCCATCCTCTTTCCACTGTAAGCAGGGCCAGAATGTAGGTCTGGTAGATTCTGTATCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172435.8 |
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| 3UTR CCA 90 bp | TCCACTCCCAAGTCCAGGGATACAGAATCTACCAGACCTACATTCTaGCCCTGCTTACAGTGGAAAGAGGATGGGTACCAGCCTGGGATT | + |
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Preference number: 1 (lower is better) Translates to: STPKSRDTESTRPTF*PCLQWKEDGYQPGI Trigger: AATCCCAGGCTGGTACCCATCCTCTTTCCACTGTAAGCAGGGCCAGAATGTAGGTCTGGTAGATTCTGTATCCCTGGACTTGGGAGTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172435.8 |
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| 3UTR TCA 90 bp | ATAAGTGATTCTCCCCTGGACCTGGGGGATGGGAGATATTCCATTTaGTATCCACTCCCAAGTCCAGGGATACAGAATCTACCAGACCTA | + |
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Preference number: 1 (lower is better) Translates to: ISDSPLDLGDGRYSI*YPLPSPGIQNLPDL Trigger: TAGGTCTGGTAGATTCTGTATCCCTGGACTTGGGAGTGGATATCAAATGGAATATCTCCCATCCCCCAGGTCCAGGGGAGAATCACTTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172435.8 |
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| 3UTR CAA 90 bp | GGAAAGAGGATGGGTACCAGCCTGGGATTCTGGGAGCATACTGCCTaGTGGGAGTCTCAAGCGGGTCACCATCTTAGGCTTTCCTGCCCC | + |
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Preference number: 2 (lower is better) Translates to: GKRMGTSLGFWEHTA*WESQAGHHLRLSCP Trigger: GGGGCAGGAAAGCCTAAGATGGTGACCCGCTTGAGACTCCCACAAGGCAGTATGCTCCCAGAATCCCAGGCTGGTACCCATCCTCTTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172435.8 |
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| 3UTR-3UTR GCA 90 bp | GAAGGAGGGCAACCCGGGCAGAAACACCCCTCTCTGAGGCCCAGAGGCAAGCTGAGTGCATCCTCACAGTaGATCCTCTCTTCTGGTTCT | + |
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Preference number: 2 (lower is better) Translates to: EGGQPGQKHPSLRPRGKLSASSQ*ILSSGS Trigger: AGAACCAGAAGAGAGGATGCACTGTGAGGATGCACT...CAGCTTGCCTCTGGGCCTCAGAGAGGGGTGTTTCTGCCCGGGTTGCCCTCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172435.8 ENSMUST00000202158.4 |
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| 3UTR-3UTR CCA 90 bp | GAAGGAGGGCAACCCGGGCAGAAACACCCCTCTCTGAGGCCCAGAGGCAAGCTGGTGCATCCTCTCTTCTaGTTCTGGTTCTTCATCCGA | + |
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Preference number: 2 (lower is better) Translates to: EGGQPGQKHPSLRPRGKLVHPLF*FWFFIR Trigger: TCGGATGAAGAACCAGAACCAGAAGAGAGGATGCAC...CAGCTTGCCTCTGGGCCTCAGAGAGGGGTGTTTCTGCCCGGGTTGCCCTCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041266.11 ENSMUST00000172435.8 ENSMUST00000202158.4 |
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| 3UTR-3UTR GCA 90 bp | ACCAGACCTACATTCTGGCCCTGCTTACAGTGGAAAGAGGATGGGTACCAGCCTCATCTTAGGCTTTCCTaGCCCCGCCCCCTTACTCAT | + |
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Preference number: 2 (lower is better) Translates to: TRPTFWPCLQWKEDGYQPHLRLS*PRPLTH Trigger: ATGAGTAAGGGGGCGGGGGCAGGAAAGCCTAAGATG...AGGCTGGTACCCATCCTCTTTCCACTGTAAGCAGGGCCAGAATGTAGGTCTGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172435.8 |
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| 3UTR-3UTR CCA 90 bp | GCCAATAGTCCTGATGCAGGTGACATGGGGCCCCTAGCGAGGACTCATACAGTGGTGCATCCTCTCTTCTaGTTCTGGTTCTTCATCCGA | + |
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Preference number: 2 (lower is better) Translates to: ANSPDAGDMGPLARTHTVVHPLF*FWFFIR Trigger: TCGGATGAAGAACCAGAACCAGAAGAGAGGATGCAC...CACTGTATGAGTCCTCGCTAGGGGCCCCATGTCACCTGCATCAGGACTATTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000202158.4 |
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| 3UTR-3UTR CCA 90 bp | GGAAGACACTGGAATAGTGCAATGCAGCGTCTGCCTCTAGGCCCAGAAGGTTCTTGGCCCTGCTTACAGTaGAAAGAGGATGGGTACCAG | + |
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Preference number: 2 (lower is better) Translates to: GRHWNSAMQRLPLGPEGSWPCLQ*KEDGYQ Trigger: CTGGTACCCATCCTCTTTCCACTGTAAGCAGGGCCA...AGAACCTTCTGGGCCTAGAGGCAGACGCTGCATTGCACTATTCCAGTGTCTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172435.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCTAGTGAGTGCCAATAGTCCTGATGCAGGTGACATGGGGCCCCTAGCGAGGCCTCTCTTCTGGTTCTaGTTCTTCATCCGATCAAAC | + |
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Preference number: 2 (lower is better) Translates to: QLVSANSPDAGDMGPLARPLFWF*FFIRSN Trigger: GTTTGATCGGATGAAGAACCAGAACCAGAAGAGAGG...CCTCGCTAGGGGCCCCATGTCACCTGCATCAGGACTATTGGCACTCACTAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000202158.4 |
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| 3UTR-3UTR TCA 90 bp | CAGAACCTTTATTGGAAAAATGTCCCAGGGGTGAGATCACCAGCAGCTGGAGGGCCCAGAAGGTTCTTCTaGCTCACTGAAGGAGGGCAA | + |
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Preference number: 2 (lower is better) Translates to: QNLYWKNVPGVRSPAAGGPRRFF*LTEGGQ Trigger: TTGCCCTCCTTCAGTGAGTCAGAAGAACCTTCTGGG...CCCTCCAGCTGCTGGTGATCTCACCCCTGGGACATTTTTCCAATAAAGGTTCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041266.11 ENSMUST00000172435.8 ENSMUST00000202158.4 |
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| 3UTR-3UTR TCA 90 bp | TCTTCTCATTCAGCAAAGACAAAGAAGGGAGGCCTTTGGCTTTCATCCCCTCCCAAAATGTCCCAGGGGTaGGATCACCAGCAGCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: SSHSAKTKKGGLWLSSPPKMSQG*DHQQLE Trigger: CTCCAGCTGCTGGTGATCTCACCCCTGGGACATTTT...GGGAGGGGATGAAAGCCAAAGGCCTCCCTTCTTTGTCTTTGCTGAATGAGAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000172435.8 |
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| 3UTR-3UTR CCA 90 bp | GTTTGTCCAGAACCTTTATTGGAAAAATGTCCCAGGGGTGAGATCACCAGCAGCACCAGCCTGGGATTCTaGGAGCATACTGCCTTGTGG | + |
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Preference number: 2 (lower is better) Translates to: VCPEPLLEKCPRGEITSSTSLGF*EHTALW Trigger: CCACAAGGCAGTATGCTCCCAGAATCCCAGGCTGGT...GCTGCTGGTGATCTCACCCCTGGGACATTTTTCCAATAAAGGTTCTGGACAAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172435.8 |
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| 3UTR-3UTR GCA 90 bp | AGACACTGGAATAGTGCAATGCAGCGTCTGCCTCTAGGCCCAGAAGGTTCTTCTAGTGCATCCTCACAGTaGATCCTCTCTTCTGGTTCT | + |
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Preference number: 2 (lower is better) Translates to: RHWNSAMQRLPLGPEGSSSASSQ*ILSSGS Trigger: AGAACCAGAAGAGAGGATGCACTGTGAGGATGCACT...AGAAGAACCTTCTGGGCCTAGAGGCAGACGCTGCATTGCACTATTCCAGTGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172435.8 ENSMUST00000202158.4 |
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| 3UTR-3UTR CCA 90 bp | AATAGTGCAATGCAGCGTCTGCCTCTAGGCCCAGAAGGTTCTTCTGACTCACTGCCTGGACCTGGGGGATaGGAGATATTCCATTTGATA | + |
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Preference number: 2 (lower is better) Translates to: NSAMQRLPLGPEGSSDSLPGPGG*EIFHLI Trigger: TATCAAATGGAATATCTCCCATCCCCCAGGTCCAGG...CAGTGAGTCAGAAGAACCTTCTGGGCCTAGAGGCAGACGCTGCATTGCACTATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172435.8 |
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| 3UTR-3UTR CCA 90 bp | GTTTGTCCAGAACCTTTATTGGAAAAATGTCCCAGGGGTGAGATCACCAGCAGCGTGCATCCTCTCTTCTaGTTCTGGTTCTTCATCCGA | + |
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Preference number: 2 (lower is better) Translates to: VCPEPLLEKCPRGEITSSVHPLF*FWFFIR Trigger: TCGGATGAAGAACCAGAACCAGAAGAGAGGATGCAC...GCTGCTGGTGATCTCACCCCTGGGACATTTTTCCAATAAAGGTTCTGGACAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041266.11 ENSMUST00000172435.8 ENSMUST00000202158.4 |
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| 3UTR-3UTR TCA 90 bp | GTTTGTCCAGAACCTTTATTGGAAAAATGTCCCAGGGGTGAGATCACCAGCAGCGGGAGATATTCCATTTaGTATCCACTCCCAAGTCCA | + |
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Preference number: 2 (lower is better) Translates to: VCPEPLLEKCPRGEITSSGRYSI*YPLPSP Trigger: TGGACTTGGGAGTGGATATCAAATGGAATATCTCCC...GCTGCTGGTGATCTCACCCCTGGGACATTTTTCCAATAAAGGTTCTGGACAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172435.8 |
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| 3UTR GCA 72 bp | TGGGAGTCTCAAGCGGGTCACCATCTTAGGCTTTCCTaGCCCCGCCCCCTTACTCATACAGTGCATCCTCAC | + |
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Preference number: 3 (lower is better) Translates to: WESQAGHHLRLS*PRPLTHTVHPH Trigger: GTGAGGATGCACTGTATGAGTAAGGGGGCGGGGGCAGGAAAGCCTAAGATGGTGACCCGCTTGAGACTCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172435.8 |
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| 3UTR TCA 72 bp | AATGCAGCGTCTGCCTCTAGGCCCAGAAGGTTCTTCTaGCTCACTGAAGGAGGGCAACCCGGGCAGAAACAC | + |
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Preference number: 3 (lower is better) Translates to: NAASASRPRRFF*LTEGGQPGQKH Trigger: GTGTTTCTGCCCGGGTTGCCCTCCTTCAGTGAGTCAGAAGAACCTTCTGGGCCTAGAGGCAGACGCTGCATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041266.11 ENSMUST00000172435.8 ENSMUST00000202158.4 |
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| 3UTR CCA 72 bp | TACAGTGGAAAGAGGATGGGTACCAGCCTGGGATTCTaGGAGCATACTGCCTTGTGGGAGTCTCAAGCGGGT | + |
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Preference number: 3 (lower is better) Translates to: YSGKRMGTSLGF*EHTALWESQAG Trigger: ACCCGCTTGAGACTCCCACAAGGCAGTATGCTCCCAGAATCCCAGGCTGGTACCCATCCTCTTTCCACTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172435.8 |
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| 3UTR CCA 72 bp | ACCTACATTCTGGCCCTGCTTACAGTGGAAAGAGGATaGGTACCAGCCTGGGATTCTGGGAGCATACTGCCT | + |
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Preference number: 3 (lower is better) Translates to: TYILALLTVERG*VPAWDSGSILP Trigger: AGGCAGTATGCTCCCAGAATCCCAGGCTGGTACCCATCCTCTTTCCACTGTAAGCAGGGCCAGAATGTAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172435.8 |
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| 3UTR GCA 72 bp | AGGGATACAGAATCTACCAGACCTACATTCTGGCCCTaGTTACAGTGGAAAGAGGATGGGTACCAGCCTGGG | + |
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Preference number: 3 (lower is better) Translates to: RDTESTRPTFWP*LQWKEDGYQPG Trigger: CCCAGGCTGGTACCCATCCTCTTTCCACTGTAAGCAGGGCCAGAATGTAGGTCTGGTAGATTCTGTATCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172435.8 |
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| 3UTR GCA 72 bp | GCCCCTAGCGAGGACTCATACAGTGCATCCTCACAGTaGATCCTCTCTTCTGGTTCTGGTTCTTCATCCGAT | + |
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Preference number: 3 (lower is better) Translates to: APSEDSYSASSQ*ILSSGSGSSSD Trigger: ATCGGATGAAGAACCAGAACCAGAAGAGAGGATGCACTGTGAGGATGCACTGTATGAGTCCTCGCTAGGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202158.4 |
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| 3UTR CCA 72 bp | GAATCTACCAGACCTACATTCTGGCCCTGCTTACAGTaGAAAGAGGATGGGTACCAGCCTGGGATTCTGGGA | + |
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Preference number: 3 (lower is better) Translates to: ESTRPTFWPCLQ*KEDGYQPGILG Trigger: TCCCAGAATCCCAGGCTGGTACCCATCCTCTTTCCACTGTAAGCAGGGCCAGAATGTAGGTCTGGTAGATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172435.8 |
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| 3UTR CCA 72 bp | AAGTCCAGGGATACAGAATCTACCAGACCTACATTCTaGCCCTGCTTACAGTGGAAAGAGGATGGGTACCAG | + |
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Preference number: 3 (lower is better) Translates to: KSRDTESTRPTF*PCLQWKEDGYQ Trigger: CTGGTACCCATCCTCTTTCCACTGTAAGCAGGGCCAGAATGTAGGTCTGGTAGATTCTGTATCCCTGGACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172435.8 |
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| 3UTR-3UTR CAA 90 bp | TGTCCAGAACCTTTATTGGAAAAATGTCCCAGGGGTGAGATCACCAGCAGCTGGTGGGAGATATTCCATTaGATATCCACTCCCAAGTCC | + |
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Preference number: 3 (lower is better) Translates to: CPEPLLEKCPRGEITSSWWEIFH*ISTPKS Trigger: GGACTTGGGAGTGGATATCAAATGGAATATCTCCCA...CCAGCTGCTGGTGATCTCACCCCTGGGACATTTTTCCAATAAAGGTTCTGGACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172435.8 |
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| 3UTR TCA 72 bp | TCTGTCCTTTCAGGTTGGTGGAGGCCTGAGAAGAACTaGCAAGGTGTAGAGATGTCTTCAGCATACCATACA | + |
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Preference number: 3 (lower is better) Translates to: SVLSGWWRPEKN*QGVEMSSAYHT Trigger: TGTATGGTATGCTGAAGACATCTCTACACCTTGTCAGTTCTTCTCAGGCCTCCACCAACCTGAAAGGACAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172435.8 |
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| 3UTR TCA 72 bp | TTATCAAGACTCTGTCCTTTCAGGTTGGTGGAGGCCTaGGAAGAACTGACAAGGTGTAGAGATGTCTTCAGC | + |
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Preference number: 3 (lower is better) Translates to: LSRLCPFRLVEA*EELTRCRDVFS Trigger: GCTGAAGACATCTCTACACCTTGTCAGTTCTTCTCAGGCCTCCACCAACCTGAAAGGACAGAGTCTTGATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172435.8 |
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| CDS-3UTR GCA 90 bp | GAAGGAGGGCAACCCGGGCAGAAACACCCCTCTCTGAGGCCCAGAGGCAAGCTGACGACTTCCCCTGTCTaGAATGGCCGCTCTCCATCC | + |
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Preference number: 4 (lower is better) Translates to: EGGQPGQKHPSLRPRGKLTTSPV*NGRSPS Trigger: GGATGGAGAGCGGCCATTGCAGACAGGGGAAGTCGT...CAGCTTGCCTCTGGGCCTCAGAGAGGGGTGTTTCTGCCCGGGTTGCCCTCCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041266.11 ENSMUST00000172435.8 |
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| CDS-3UTR CCA 90 bp | CTCACTGAAGGAGGGCAACCCGGGCAGAAACACCCCTCTCTGAGGCCCAGAGGCTTCCCCTGTCTGCAATaGCCGCTCTCCATCCAGACC | + |
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Preference number: 4 (lower is better) Translates to: LTEGGQPGQKHPSLRPRGFPCLQ*PLSIQT Trigger: GGTCTGGATGGAGAGCGGCCATTGCAGACAGGGGAA...GCCTCTGGGCCTCAGAGAGGGGTGTTTCTGCCCGGGTTGCCCTCCTTCAGTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041266.11 ENSMUST00000172435.8 |
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| CDS-3UTR CCA 90 bp | CTCACTGAAGGAGGGCAACCCGGGCAGAAACACCCCTCTCTGAGGCCCAGAGGCCCAGCAGGAGGACCGTaGGACTCAGATATGGGGAAA | + |
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Preference number: 4 (lower is better) Translates to: LTEGGQPGQKHPSLRPRGPAGGP*DSDMGK Trigger: TTTCCCCATATCTGAGTCCCACGGTCCTCCTGCTGG...GCCTCTGGGCCTCAGAGAGGGGTGTTTCTGCCCGGGTTGCCCTCCTTCAGTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041266.11 ENSMUST00000172435.8 |
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| CDS-3UTR CCA 90 bp | AGTGCAATGCAGCGTCTGCCTCTAGGCCCAGAAGGTTCTTCTGACTCACTGAAGGTGCACACGGGGCCCTaGAGGGCTCTCTCCCCGGAG | + |
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Preference number: 4 (lower is better) Translates to: SAMQRLPLGPEGSSDSLKVHTGP*RALSPE Trigger: CTCCGGGGAGAGAGCCCTCCAGGGCCCCGTGTGCAC...CTTCAGTGAGTCAGAAGAACCTTCTGGGCCTAGAGGCAGACGCTGCATTGCACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041266.11 ENSMUST00000172435.8 |
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| CDS-3UTR CCA 90 bp | ACCAGACCTACATTCTGGCCCTGCTTACAGTGGAAAGAGGATGGGTACCAGCCTGTGCACACGGGGCCCTaGAGGGCTCTCTCCCCGGAG | + |
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Preference number: 4 (lower is better) Translates to: TRPTFWPCLQWKEDGYQPVHTGP*RALSPE Trigger: CTCCGGGGAGAGAGCCCTCCAGGGCCCCGTGTGCAC...AGGCTGGTACCCATCCTCTTTCCACTGTAAGCAGGGCCAGAATGTAGGTCTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172435.8 |
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| CDS-3UTR GCA 90 bp | GACCTACATTCTGGCCCTGCTTACAGTGGAAAGAGGATGGGTACCAGCCTGGGATTGAGCGTGCGGAAGTaGACACGGGGCCCTGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: DLHSGPAYSGKRMGTSLGLSVRK*TRGPGG Trigger: CCCTCCAGGGCCCCGTGTGCACTTCCGCACGCTCAA...TCCCAGGCTGGTACCCATCCTCTTTCCACTGTAAGCAGGGCCAGAATGTAGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172435.8 |
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| CDS-3UTR CCA 90 bp | GAAGGAGGGCAACCCGGGCAGAAACACCCCTCTCTGAGGCCCAGAGGCAAGCTGCCTTCCCCTTCTCCTTaGGGTTGTTGTTGGAGTCGT | + |
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Preference number: 4 (lower is better) Translates to: EGGQPGQKHPSLRPRGKLPSPSP*GCCWSR Trigger: ACGACTCCAACAACAACCCCAAGGAGAAGGGGAAGG...CAGCTTGCCTCTGGGCCTCAGAGAGGGGTGTTTCTGCCCGGGTTGCCCTCCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041266.11 ENSMUST00000172435.8 |
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| CDS-3UTR CCA 90 bp | CTCACTGAAGGAGGGCAACCCGGGCAGAAACACCCCTCTCTGAGGCCCAGAGGCGCATCAAAGAAGCCATaGTTTCCACCGAGTTCGCTG | + |
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Preference number: 4 (lower is better) Translates to: LTEGGQPGQKHPSLRPRGASKKP*FPPSSL Trigger: CAGCGAACTCGGTGGAAACCATGGCTTCTTTGATGC...GCCTCTGGGCCTCAGAGAGGGGTGTTTCTGCCCGGGTTGCCCTCCTTCAGTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041266.11 ENSMUST00000172435.8 |
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| CDS-3UTR CCA 90 bp | CAGCTAGTGAGTGCCAATAGTCCTGATGCAGGTGACATGGGGCCCCTAGCGAGGAGAGAGCGCAGGCCCTaGTGGTGGTGTTCACTTCTC | + |
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Preference number: 4 (lower is better) Translates to: QLVSANSPDAGDMGPLARRERRP*WWCSLL Trigger: GAGAAGTGAACACCACCACCAGGGCCTGCGCTCTCT...CCTCGCTAGGGGCCCCATGTCACCTGCATCAGGACTATTGGCACTCACTAGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041266.11 ENSMUST00000172435.8 |
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| CDS-3UTR GCA 90 bp | CAGAACCTTTATTGGAAAAATGTCCCAGGGGTGAGATCACCAGCAGCTGGAGGGTTGAGCGTGCGGAAGTaGACACGGGGCCCTGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: QNLYWKNVPGVRSPAAGGLSVRK*TRGPGG Trigger: CCCTCCAGGGCCCCGTGTGCACTTCCGCACGCTCAA...CCCTCCAGCTGCTGGTGATCTCACCCCTGGGACATTTTTCCAATAAAGGTTCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041266.11 ENSMUST00000172435.8 |
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| CDS-3UTR TCA 90 bp | CAGAACCTTTATTGGAAAAATGTCCCAGGGGTGAGATCACCAGCAGCTGGAGGGAACCCAGGTCACAGCTaGCCAGCAGGAGGACCGTGG | + |
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Preference number: 4 (lower is better) Translates to: QNLYWKNVPGVRSPAAGGNPGHS*PAGGPW Trigger: CCACGGTCCTCCTGCTGGTCAGCTGTGACCTGGGTT...CCCTCCAGCTGCTGGTGATCTCACCCCTGGGACATTTTTCCAATAAAGGTTCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041266.11 ENSMUST00000172435.8 |
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| CDS-3UTR TCA 90 bp | ACCAGACCTACATTCTGGCCCTGCTTACAGTGGAAAGAGGATGGGTACCAGCCTGCCTGTCAGAACCCTTaGGCGTGCGGAAGTGCACAC | + |
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Preference number: 4 (lower is better) Translates to: TRPTFWPCLQWKEDGYQPACQNP*ACGSAH Trigger: GTGTGCACTTCCGCACGCTCAAGGGTTCTGACAGGC...AGGCTGGTACCCATCCTCTTTCCACTGTAAGCAGGGCCAGAATGTAGGTCTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172435.8 |
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| CDS-3UTR CCA 90 bp | GCCAATAGTCCTGATGCAGGTGACATGGGGCCCCTAGCGAGGACAGTGCATCCTGACGATGTTGCCTTCTaGAACGTCCCAGGACACAGT | + |
|
Preference number: 4 (lower is better) Translates to: ANSPDAGDMGPLARTVHPDDVAF*NVPGHS Trigger: ACTGTGTCCTGGGACGTTCCAGAAGGCAACATCGTC...AGGATGCACTGTCCTCGCTAGGGGCCCCATGTCACCTGCATCAGGACTATTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041266.11 |
||
| CDS-3UTR CCA 90 bp | GCCAATAGTCCTGATGCAGGTGACATGGGGCCCCTAGCGAGGACAGTGCATCCTCCTTCCCCTTCTCCTTaGGGTTGTTGTTGGAGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: ANSPDAGDMGPLARTVHPPSPSP*GCCWSR Trigger: ACGACTCCAACAACAACCCCAAGGAGAAGGGGAAGG...AGGATGCACTGTCCTCGCTAGGGGCCCCATGTCACCTGCATCAGGACTATTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041266.11 |
||
| CDS-3UTR TCA 90 bp | ACTGAAGGAGGGCAACCCGGGCAGAAACACCCCTCTCTGAGGCCCAGAGGCAAGAAATGGAGTAGCCAATaGCGATGTTGCCTTCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TEGGQPGQKHPSLRPRGKKWSSQ*RCCLLE Trigger: TTCCAGAAGGCAACATCGTCATTGGCTACTCCATTT...CTTGCCTCTGGGCCTCAGAGAGGGGTGTTTCTGCCCGGGTTGCCCTCCTTCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041266.11 ENSMUST00000172435.8 |
||
| CDS-3UTR TCA 90 bp | CAGAACCTTTATTGGAAAAATGTCCCAGGGGTGAGATCACCAGCAGCTGGAGGGGCCTGTCAGAACCCTTaGGCGTGCGGAAGTGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: QNLYWKNVPGVRSPAAGGACQNP*ACGSAH Trigger: GTGTGCACTTCCGCACGCTCAAGGGTTCTGACAGGC...CCCTCCAGCTGCTGGTGATCTCACCCCTGGGACATTTTTCCAATAAAGGTTCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041266.11 ENSMUST00000172435.8 |
||
| CDS-3UTR TCA 90 bp | TGTCCAGAACCTTTATTGGAAAAATGTCCCAGGGGTGAGATCACCAGCAGCTGGTGGTGTTCACTTCTCTaGTTACACGCTGCCCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CPEPLLEKCPRGEITSSWWCSLL*LHAAPG Trigger: GCCCGGGGCAGCGTGTAATCAGAGAAGTGAACACCA...CCAGCTGCTGGTGATCTCACCCCTGGGACATTTTTCCAATAAAGGTTCTGGACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041266.11 ENSMUST00000172435.8 |
||
| CDS-3UTR TCA 90 bp | TATCCACTCCCAAGTCCAGGGATACAGAATCTACCAGACCTACATTCTGGCCCTTGGTGTTCACTTCTCTaGTTACACGCTGCCCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: YPLPSPGIQNLPDLHSGPWCSLL*LHAAPG Trigger: GCCCGGGGCAGCGTGTAATCAGAGAAGTGAACACCA...AGGGCCAGAATGTAGGTCTGGTAGATTCTGTATCCCTGGACTTGGGAGTGGATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172435.8 |
||
| CDS-3UTR CCA 90 bp | TGTCCAGAACCTTTATTGGAAAAATGTCCCAGGGGTGAGATCACCAGCAGCTGGAGAGAGCGCAGGCCCTaGTGGTGGTGTTCACTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CPEPLLEKCPRGEITSSWRERRP*WWCSLL Trigger: GAGAAGTGAACACCACCACCAGGGCCTGCGCTCTCT...CCAGCTGCTGGTGATCTCACCCCTGGGACATTTTTCCAATAAAGGTTCTGGACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041266.11 ENSMUST00000172435.8 |
||
| CDS-3UTR GCA 90 bp | GTTTGTCCAGAACCTTTATTGGAAAAATGTCCCAGGGGTGAGATCACCAGCAGCACGACTTCCCCTGTCTaGAATGGCCGCTCTCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: VCPEPLLEKCPRGEITSSTTSPV*NGRSPS Trigger: GGATGGAGAGCGGCCATTGCAGACAGGGGAAGTCGT...GCTGCTGGTGATCTCACCCCTGGGACATTTTTCCAATAAAGGTTCTGGACAAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041266.11 ENSMUST00000172435.8 |
||
| CDS-3UTR TCA 90 bp | AGACACTGGAATAGTGCAATGCAGCGTCTGCCTCTAGGCCCAGAAGGTTCTTCTGAGTTGGCTCTGAGATaGGTGACCGTCACATTCACA | + |
|
Preference number: 4 (lower is better) Translates to: RHWNSAMQRLPLGPEGSSELALR*VTVTFT Trigger: TGTGAATGTGACGGTCACTCATCTCAGAGCCAACTC...AGAAGAACCTTCTGGGCCTAGAGGCAGACGCTGCATTGCACTATTCCAGTGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041266.11 ENSMUST00000172435.8 |
||
| CDS-3UTR TCA 90 bp | TCTTCTCATTCAGCAAAGACAAAGAAGGGAGGCCTTTGGCTTTCATCCCCTCCCGAGTTGGCTCTGAGATaGGTGACCGTCACATTCACA | + |
|
Preference number: 4 (lower is better) Translates to: SSHSAKTKKGGLWLSSPPELALR*VTVTFT Trigger: TGTGAATGTGACGGTCACTCATCTCAGAGCCAACTC...GGGAGGGGATGAAAGCCAAAGGCCTCCCTTCTTTGTCTTTGCTGAATGAGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172435.8 |
||
| CDS-3UTR TCA 90 bp | CAGCTAGTGAGTGCCAATAGTCCTGATGCAGGTGACATGGGGCCCCTAGCGAGGATCAATGGTGTTGATTaGTGGAGACTTTTTCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QLVSANSPDAGDMGPLARINGVD*WRLFLS Trigger: AGACAGAAAAAGTCTCCATCAATCAACACCATTGAT...CCTCGCTAGGGGCCCCATGTCACCTGCATCAGGACTATTGGCACTCACTAGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041266.11 ENSMUST00000172435.8 |
||
| CDS-3UTR CCA 90 bp | AATAGTGCAATGCAGCGTCTGCCTCTAGGCCCAGAAGGTTCTTCTGACTCACTGCGTGGGACTCAGATATaGGGAAAGAGGCATCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: NSAMQRLPLGPEGSSDSLRGTQI*GKRHQR Trigger: TCTTTGATGCCTCTTTCCCCATATCTGAGTCCCACG...CAGTGAGTCAGAAGAACCTTCTGGGCCTAGAGGCAGACGCTGCATTGCACTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041266.11 ENSMUST00000172435.8 |
||
| CDS-3UTR CCA 90 bp | GTTTGTCCAGAACCTTTATTGGAAAAATGTCCCAGGGGTGAGATCACCAGCAGCGACGATGTTGCCTTCTaGAACGTCCCAGGACACAGT | + |
|
Preference number: 4 (lower is better) Translates to: VCPEPLLEKCPRGEITSSDDVAF*NVPGHS Trigger: ACTGTGTCCTGGGACGTTCCAGAAGGCAACATCGTC...GCTGCTGGTGATCTCACCCCTGGGACATTTTTCCAATAAAGGTTCTGGACAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041266.11 ENSMUST00000172435.8 |
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| CDS-3UTR TCA 90 bp | AGACACTGGAATAGTGCAATGCAGCGTCTGCCTCTAGGCCCAGAAGGTTCTTCTAAATGGAGTAGCCAATaGCGATGTTGCCTTCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RHWNSAMQRLPLGPEGSSKWSSQ*RCCLLE Trigger: TTCCAGAAGGCAACATCGTCATTGGCTACTCCATTT...AGAAGAACCTTCTGGGCCTAGAGGCAGACGCTGCATTGCACTATTCCAGTGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041266.11 ENSMUST00000172435.8 |
||
| 3UTR CAA 72 bp | AGGAACCAGTCAGTTCCAGTTTGTCCAGAACCTTTATaGGAAAAATGTCCCAGGGGTGAGATCACCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RNQSVPVCPEPL*EKCPRGEITSS Trigger: GCTGCTGGTGATCTCACCCCTGGGACATTTTTCCAATAAAGGTTCTGGACAAACTGGAACTGACTGGTTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172435.8 |
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| CDS-3UTR CCA 90 bp | CAGTTTGTCCAGAACCTTTATTGGAAAAATGTCCCAGGGGTGAGATCACCAGCAGCATCAAAGAAGCCATaGTTTCCACCGAGTTCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QFVQNLYWKNVPGVRSPAASKKP*FPPSSL Trigger: CAGCGAACTCGGTGGAAACCATGGCTTCTTTGATGC...TGCTGGTGATCTCACCCCTGGGACATTTTTCCAATAAAGGTTCTGGACAAACTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041266.11 ENSMUST00000172435.8 |
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| CDS-3UTR CCA 90 bp | TTTGTCCAGAACCTTTATTGGAAAAATGTCCCAGGGGTGAGATCACCAGCAGCTCGTGGGACTCAGATATaGGGAAAGAGGCATCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FVQNLYWKNVPGVRSPAARGTQI*GKRHQR Trigger: TCTTTGATGCCTCTTTCCCCATATCTGAGTCCCACG...AGCTGCTGGTGATCTCACCCCTGGGACATTTTTCCAATAAAGGTTCTGGACAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041266.11 ENSMUST00000172435.8 |
||
| 3UTR CAA 72 bp | CTTCAGCATACCATACAGGAACCAGTCAGTTCCAGTTaGTCCAGAACCTTTATTGGAAAAATGTCCCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LQHTIQEPVSSS*SRTFIGKMSQG Trigger: CCCCTGGGACATTTTTCCAATAAAGGTTCTGGACAAACTGGAACTGACTGGTTCCTGTATGGTATGCTGAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172435.8 |
||
| CDS-3UTR TCA 90 bp | GTTTGTCCAGAACCTTTATTGGAAAAATGTCCCAGGGGTGAGATCACCAGCAGCATCAATGGTGTTGATTaGTGGAGACTTTTTCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VCPEPLLEKCPRGEITSSINGVD*WRLFLS Trigger: AGACAGAAAAAGTCTCCATCAATCAACACCATTGAT...GCTGCTGGTGATCTCACCCCTGGGACATTTTTCCAATAAAGGTTCTGGACAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000041266.11 ENSMUST00000172435.8 |
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| CDS GCA 90 bp | GAGCTGTTGGAGGGCAGCCTGTCAGAACCCTTGAGCGTGCGGAAGTaGACACGGGGCCCTGGAGGGCTCTCTCCCCGGAGGCCGATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: ELLEGSLSEPLSVRK*TRGPGGLSPRRPML Trigger: GAGCATCGGCCTCCGGGGAGAGAGCCCTCCAGGGCCCCGTGTGCACTTCCGCACGCTCAAGGGTTCTGACAGGCTGCCCTCCAACAGCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041266.11 ENSMUST00000172435.8 ENSMUST00000202615.4 |
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| CDS CCA 90 bp | CAGCCTGTCAGAACCCTTGAGCGTGCGGAAGTGCACACGGGGCCCTaGAGGGCTCTCTCCCCGGAGGCCGATGCTCCTAACCTGCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: QPVRTLERAEVHTGP*RALSPEADAPNLHC Trigger: ACAGTGCAGGTTAGGAGCATCGGCCTCCGGGGAGAGAGCCCTCCAGGGCCCCGTGTGCACTTCCGCACGCTCAAGGGTTCTGACAGGCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041266.11 ENSMUST00000172435.8 ENSMUST00000202615.4 |
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| CDS TCA 90 bp | TATCACCTGGACTGGAGCTGTTGGAGGGCAGCCTGTCAGAACCCTTaGGCGTGCGGAAGTGCACACGGGGCCCTGGAGGGCTCTCTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: YHLDWSCWRAACQNP*ACGSAHGALEGSLP Trigger: GGGGAGAGAGCCCTCCAGGGCCCCGTGTGCACTTCCGCACGCTCAAGGGTTCTGACAGGCTGCCCTCCAACAGCTCCAGTCCAGGTGATA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041266.11 ENSMUST00000172435.8 ENSMUST00000202615.4 |
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| CDS-3UTR CAA 90 bp | CTCACTGAAGGAGGGCAACCCGGGCAGAAACACCCCTCTCTGAGGCCCAGAGGCAGCCTGTCAGAACCCTaGAGCGTGCGGAAGTGCACA | + |
|
Preference number: 5 (lower is better) Translates to: LTEGGQPGQKHPSLRPRGSLSEP*SVRKCT Trigger: TGTGCACTTCCGCACGCTCAAGGGTTCTGACAGGCT...GCCTCTGGGCCTCAGAGAGGGGTGTTTCTGCCCGGGTTGCCCTCCTTCAGTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041266.11 ENSMUST00000172435.8 |
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| CDS TCA 90 bp | CAGGAGAGGGAGGTCGGTCTGCTCGCACAAAACCCAGGTCACAGCTaGCCAGCAGGAGGACCGTGGGACTCAGATATGGGGAAAGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: QEREVGLLAQNPGHS*PAGGPWDSDMGKEA Trigger: TGCCTCTTTCCCCATATCTGAGTCCCACGGTCCTCCTGCTGGTCAGCTGTGACCTGGGTTTTGTGCGAGCAGACCGACCTCCCTCTCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041266.11 ENSMUST00000172435.8 ENSMUST00000201417.2 ENSMUST00000202615.4 |
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| CDS-3UTR CAA 90 bp | GGGGCCCCTAGCGAGGACAGTGCATCCTCTCTTCTGGTTCTGGTTCTTCATCCGCCTGGACTGGAGCTGTaGGAGGGCAGCCTGTCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: GAPSEDSASSLLVLVLHPPGLEL*EGSLSE Trigger: TTCTGACAGGCTGCCCTCCAACAGCTCCAGTCCAGG...CGGATGAAGAACCAGAACCAGAAGAGAGGATGCACTGTCCTCGCTAGGGGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041266.11 |
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| CDS-3UTR CAA 90 bp | CAGCTAGTGAGTGCCAATAGTCCTGATGCAGGTGACATGGGGCCCCTAGCGAGGAGCCTGTCAGAACCCTaGAGCGTGCGGAAGTGCACA | + |
|
Preference number: 5 (lower is better) Translates to: QLVSANSPDAGDMGPLARSLSEP*SVRKCT Trigger: TGTGCACTTCCGCACGCTCAAGGGTTCTGACAGGCT...CCTCGCTAGGGGCCCCATGTCACCTGCATCAGGACTATTGGCACTCACTAGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041266.11 ENSMUST00000172435.8 |
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| CDS CCA 90 bp | ACCCAGGTCACAGCTGACCAGCAGGAGGACCGTGGGACTCAGATATaGGGAAAGAGGCATCAAAGAAGCCATGGTTTCCACCGAGTTCGC | + |
|
Preference number: 5 (lower is better) Translates to: TQVTADQQEDRGTQI*GKRHQRSHGFHRVR Trigger: GCGAACTCGGTGGAAACCATGGCTTCTTTGATGCCTCTTTCCCCATATCTGAGTCCCACGGTCCTCCTGCTGGTCAGCTGTGACCTGGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041266.11 ENSMUST00000172435.8 ENSMUST00000201417.2 ENSMUST00000202615.4 |
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| CDS-3UTR CAA 90 bp | CAGAACCTTTATTGGAAAAATGTCCCAGGGGTGAGATCACCAGCAGCTGGAGGGCCTGGACTGGAGCTGTaGGAGGGCAGCCTGTCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: QNLYWKNVPGVRSPAAGGPGLEL*EGSLSE Trigger: TTCTGACAGGCTGCCCTCCAACAGCTCCAGTCCAGG...CCCTCCAGCTGCTGGTGATCTCACCCCTGGGACATTTTTCCAATAAAGGTTCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041266.11 ENSMUST00000172435.8 |
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| CDS-3UTR CAA 90 bp | GGAAGACACTGGAATAGTGCAATGCAGCGTCTGCCTCTAGGCCCAGAAGGTTCTCCCTTCTCCTTGGGGTaGTTGTTGGAGTCGTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GRHWNSAMQRLPLGPEGSPFSLG*LLESLS Trigger: GGACAACGACTCCAACAACAACCCCAAGGAGAAGGG...AGAACCTTCTGGGCCTAGAGGCAGACGCTGCATTGCACTATTCCAGTGTCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041266.11 ENSMUST00000172435.8 |
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| CDS-3UTR CAA 90 bp | AGTGCAATGCAGCGTCTGCCTCTAGGCCCAGAAGGTTCTTCTGACTCACTGAAGCCCTTCTCCTTGGGGTaGTTGTTGGAGTCGTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SAMQRLPLGPEGSSDSLKPFSLG*LLESLS Trigger: GGACAACGACTCCAACAACAACCCCAAGGAGAAGGG...CTTCAGTGAGTCAGAAGAACCTTCTGGGCCTAGAGGCAGACGCTGCATTGCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041266.11 ENSMUST00000172435.8 |
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| CDS GCA 90 bp | GCCCACATGAGCAATACCACTACAATGATGACGACTTCCCCTGTCTaGAATGGCCGCTCTCCATCCAGACCCTCCACTGTAATATCACCT | + |
|
Preference number: 5 (lower is better) Translates to: AHMSNTTTMMTTSPV*NGRSPSRPSTVISP Trigger: AGGTGATATTACAGTGGAGGGTCTGGATGGAGAGCGGCCATTGCAGACAGGGGAAGTCGTCATCATTGTAGTGGTATTGCTCATGTGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041266.11 ENSMUST00000172435.8 ENSMUST00000202615.4 |
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| CDS-3UTR CAA 90 bp | GTTTGTCCAGAACCTTTATTGGAAAAATGTCCCAGGGGTGAGATCACCAGCAGCCGGGCCATTCTGTCGTaGCTGGGAAATGGAGTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: VCPEPLLEKCPRGEITSSRAILS*LGNGVA Trigger: GGCTACTCCATTTCCCAGCAACGACAGAATGGCCCG...GCTGCTGGTGATCTCACCCCTGGGACATTTTTCCAATAAAGGTTCTGGACAAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041266.11 ENSMUST00000172435.8 |
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| CDS-3UTR CAA 90 bp | AGTGCAATGCAGCGTCTGCCTCTAGGCCCAGAAGGTTCTTCTGACTCACTGAAGGAGACTTTTTCTGTCTaGTTGTCCCCACTGGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SAMQRLPLGPEGSSDSLKETFSV*LSPLAF Trigger: GAAGGCCAGTGGGGACAACAAGACAGAAAAAGTCTC...CTTCAGTGAGTCAGAAGAACCTTCTGGGCCTAGAGGCAGACGCTGCATTGCACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041266.11 ENSMUST00000172435.8 ENSMUST00000202158.4 |
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| CDS CCA 90 bp | CATGAGCAATACCACTACAATGATGACGACTTCCCCTGTCTGCAATaGCCGCTCTCCATCCAGACCCTCCACTGTAATATCACCTGGACT | + |
|
Preference number: 5 (lower is better) Translates to: HEQYHYNDDDFPCLQ*PLSIQTLHCNITWT Trigger: AGTCCAGGTGATATTACAGTGGAGGGTCTGGATGGAGAGCGGCCATTGCAGACAGGGGAAGTCGTCATCATTGTAGTGGTATTGCTCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041266.11 ENSMUST00000172435.8 ENSMUST00000202615.4 |
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| CDS-3UTR CAA 90 bp | GTTTGTCCAGAACCTTTATTGGAAAAATGTCCCAGGGGTGAGATCACCAGCAGCTTCTCCTTGGGGTTGTaGTTGGAGTCGTTGTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VCPEPLLEKCPRGEITSSFSLGL*LESLSL Trigger: CAAGGACAACGACTCCAACAACAACCCCAAGGAGAA...GCTGCTGGTGATCTCACCCCTGGGACATTTTTCCAATAAAGGTTCTGGACAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041266.11 ENSMUST00000172435.8 |
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| CDS-3UTR CAA 90 bp | GTTTGTCCAGAACCTTTATTGGAAAAATGTCCCAGGGGTGAGATCACCAGCAGCGAGACTTTTTCTGTCTaGTTGTCCCCACTGGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VCPEPLLEKCPRGEITSSETFSV*LSPLAF Trigger: GAAGGCCAGTGGGGACAACAAGACAGAAAAAGTCTC...GCTGCTGGTGATCTCACCCCTGGGACATTTTTCCAATAAAGGTTCTGGACAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000041266.11 ENSMUST00000172435.8 ENSMUST00000202158.4 |
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| CDS-3UTR CAA 90 bp | TGCATCCTCACAGTGCATCCTCTCTTCTGGTTCTGGTTCTTCATCCGATCAAACGAGACTTTTTCTGTCTaGTTGTCCCCACTGGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: CILTVHPLFWFWFFIRSNETFSV*LSPLAF Trigger: GAAGGCCAGTGGGGACAACAAGACAGAAAAAGTCTC...GTTTGATCGGATGAAGAACCAGAACCAGAAGAGAGGATGCACTGTGAGGATGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000202158.4 |
||
| CDS-3UTR CAA 90 bp | TTTGTCCAGAACCTTTATTGGAAAAATGTCCCAGGGGTGAGATCACCAGCAGCTTTCTCCTTGGGGTTGTaGTTGGAGTCGTTGTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: FVQNLYWKNVPGVRSPAAFSLGL*LESLSL Trigger: CAAGGACAACGACTCCAACAACAACCCCAAGGAGAA...AGCTGCTGGTGATCTCACCCCTGGGACATTTTTCCAATAAAGGTTCTGGACAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041266.11 ENSMUST00000172435.8 |
||
| CDS-3UTR CAA 90 bp | CAGAACCTTTATTGGAAAAATGTCCCAGGGGTGAGATCACCAGCAGCTGGAGGGCAAACATCAATGGTGTaGATTGATGGAGACTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: QNLYWKNVPGVRSPAAGGQTSMV*IDGDFF Trigger: GAAAAAGTCTCCATCAATCAACACCATTGATGTTTG...CCCTCCAGCTGCTGGTGATCTCACCCCTGGGACATTTTTCCAATAAAGGTTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000041266.11 ENSMUST00000172435.8 |
||
| CDS-3UTR CAA 90 bp | TGTCCAGAACCTTTATTGGAAAAATGTCCCAGGGGTGAGATCACCAGCAGCTGGCAAACATCAATGGTGTaGATTGATGGAGACTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: CPEPLLEKCPRGEITSSWQTSMV*IDGDFF Trigger: GAAAAAGTCTCCATCAATCAACACCATTGATGTTTG...CCAGCTGCTGGTGATCTCACCCCTGGGACATTTTTCCAATAAAGGTTCTGGACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000041266.11 ENSMUST00000172435.8 |
||
| CDS GCA 72 bp | GAGGGCAGCCTGTCAGAACCCTTGAGCGTGCGGAAGTaGACACGGGGCCCTGGAGGGCTCTCTCCCCGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: EGSLSEPLSVRK*TRGPGGLSPRR Trigger: CCTCCGGGGAGAGAGCCCTCCAGGGCCCCGTGTGCACTTCCGCACGCTCAAGGGTTCTGACAGGCTGCCCTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041266.11 ENSMUST00000172435.8 ENSMUST00000202615.4 |
||
| CDS TCA 72 bp | GACTGGAGCTGTTGGAGGGCAGCCTGTCAGAACCCTTaGGCGTGCGGAAGTGCACACGGGGCCCTGGAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: DWSCWRAACQNP*ACGSAHGALEG Trigger: GCCCTCCAGGGCCCCGTGTGCACTTCCGCACGCTCAAGGGTTCTGACAGGCTGCCCTCCAACAGCTCCAGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041266.11 ENSMUST00000172435.8 ENSMUST00000202615.4 |
||
| CDS CCA 72 bp | AGAACCCTTGAGCGTGCGGAAGTGCACACGGGGCCCTaGAGGGCTCTCTCCCCGGAGGCCGATGCTCCTAAC | + |
|
Preference number: 6 (lower is better) Translates to: RTLERAEVHTGP*RALSPEADAPN Trigger: GTTAGGAGCATCGGCCTCCGGGGAGAGAGCCCTCCAGGGCCCCGTGTGCACTTCCGCACGCTCAAGGGTTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041266.11 ENSMUST00000172435.8 ENSMUST00000202615.4 |
||
| CDS CAA 72 bp | GGACTGGAGCTGTTGGAGGGCAGCCTGTCAGAACCCTaGAGCGTGCGGAAGTGCACACGGGGCCCTGGAGGG | + |
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Preference number: 6 (lower is better) Translates to: GLELLEGSLSEP*SVRKCTRGPGG Trigger: CCCTCCAGGGCCCCGTGTGCACTTCCGCACGCTCAAGGGTTCTGACAGGCTGCCCTCCAACAGCTCCAGTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041266.11 ENSMUST00000172435.8 ENSMUST00000202615.4 |
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| CDS CAA 90 bp | ATATCACCTGGACTGGAGCTGTTGGAGGGCAGCCTGTCAGAACCCTaGAGCGTGCGGAAGTGCACACGGGGCCCTGGAGGGCTCTCTCCC | + |
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Preference number: 6 (lower is better) Translates to: ISPGLELLEGSLSEP*SVRKCTRGPGGLSP Trigger: GGGAGAGAGCCCTCCAGGGCCCCGTGTGCACTTCCGCACGCTCAAGGGTTCTGACAGGCTGCCCTCCAACAGCTCCAGTCCAGGTGATAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041266.11 ENSMUST00000172435.8 ENSMUST00000202615.4 |
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| CDS TCA 72 bp | AGAGAGCGCAGGCCCTGGTGGTGGTGTTCACTTCTCTaGTTACACGCTGCCCCGGGCCATTCTGTCGTTGCT | + |
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Preference number: 6 (lower is better) Translates to: RERRPWWWCSLL*LHAAPGHSVVA Trigger: AGCAACGACAGAATGGCCCGGGGCAGCGTGTAATCAGAGAAGTGAACACCACCACCAGGGCCTGCGCTCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041266.11 ENSMUST00000172435.8 ENSMUST00000201417.2 ENSMUST00000202615.4 |
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| CDS GCA 72 bp | GCCCTGGTGGTGGTGTTCACTTCTCTGATTACACGCTaGCCCGGGCCATTCTGTCGTTGCTGGGAAATGGAG | + |
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Preference number: 6 (lower is better) Translates to: ALVVVFTSLITR*PGPFCRCWEME Trigger: CTCCATTTCCCAGCAACGACAGAATGGCCCGGGGCAGCGTGTAATCAGAGAAGTGAACACCACCACCAGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041266.11 ENSMUST00000172435.8 ENSMUST00000201417.2 ENSMUST00000202615.4 |
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| CDS CCA 72 bp | CCGCTCTCCATCCAGACCCTCCACTGTAATATCACCTaGACTGGAGCTGTTGGAGGGCAGCCTGTCAGAACC | + |
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Preference number: 6 (lower is better) Translates to: PLSIQTLHCNIT*TGAVGGQPVRT Trigger: GGTTCTGACAGGCTGCCCTCCAACAGCTCCAGTCCAGGTGATATTACAGTGGAGGGTCTGGATGGAGAGCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041266.11 ENSMUST00000172435.8 ENSMUST00000202615.4 |
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| CDS CAA 72 bp | AGACCCTCCACTGTAATATCACCTGGACTGGAGCTGTaGGAGGGCAGCCTGTCAGAACCCTTGAGCGTGCGG | + |
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Preference number: 6 (lower is better) Translates to: RPSTVISPGLEL*EGSLSEPLSVR Trigger: CCGCACGCTCAAGGGTTCTGACAGGCTGCCCTCCAACAGCTCCAGTCCAGGTGATATTACAGTGGAGGGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041266.11 ENSMUST00000172435.8 ENSMUST00000202615.4 |
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| CDS CCA 72 bp | GACTCAGATATGGGGAAAGAGGCATCAAAGAAGCCATaGTTTCCACCGAGTTCGCTGGAGGGGCCAGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: DSDMGKEASKKP*FPPSSLEGPEA Trigger: TGCCTCTGGCCCCTCCAGCGAACTCGGTGGAAACCATGGCTTCTTTGATGCCTCTTTCCCCATATCTGAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041266.11 ENSMUST00000172435.8 ENSMUST00000201417.2 ENSMUST00000202615.4 |
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| CDS TCA 72 bp | GGCCATTCTGTCGTTGCTGGGAAATGGAGTAGCCAATaGCGATGTTGCCTTCTGGAACGTCCCAGGACACAG | + |
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Preference number: 6 (lower is better) Translates to: GHSVVAGKWSSQ*RCCLLERPRTQ Trigger: CTGTGTCCTGGGACGTTCCAGAAGGCAACATCGTCATTGGCTACTCCATTTCCCAGCAACGACAGAATGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041266.11 ENSMUST00000172435.8 ENSMUST00000201417.2 ENSMUST00000202615.4 |
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| CDS CCA 72 bp | ACAGCTGACCAGCAGGAGGACCGTGGGACTCAGATATaGGGAAAGAGGCATCAAAGAAGCCATGGTTTCCAC | + |
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Preference number: 6 (lower is better) Translates to: TADQQEDRGTQI*GKRHQRSHGFH Trigger: GTGGAAACCATGGCTTCTTTGATGCCTCTTTCCCCATATCTGAGTCCCACGGTCCTCCTGCTGGTCAGCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041266.11 ENSMUST00000172435.8 ENSMUST00000201417.2 ENSMUST00000202615.4 |
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| CDS GCA 72 bp | AGCAATACCACTACAATGATGACGACTTCCCCTGTCTaGAATGGCCGCTCTCCATCCAGACCCTCCACTGTA | + |
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Preference number: 6 (lower is better) Translates to: SNTTTMMTTSPV*NGRSPSRPSTV Trigger: TACAGTGGAGGGTCTGGATGGAGAGCGGCCATTGCAGACAGGGGAAGTCGTCATCATTGTAGTGGTATTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041266.11 ENSMUST00000172435.8 ENSMUST00000202615.4 |
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| CDS CCA 72 bp | TACCACTACAATGATGACGACTTCCCCTGTCTGCAATaGCCGCTCTCCATCCAGACCCTCCACTGTAATATC | + |
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Preference number: 6 (lower is better) Translates to: YHYNDDDFPCLQ*PLSIQTLHCNI Trigger: GATATTACAGTGGAGGGTCTGGATGGAGAGCGGCCATTGCAGACAGGGGAAGTCGTCATCATTGTAGTGGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041266.11 ENSMUST00000172435.8 ENSMUST00000202615.4 |
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