Pregenerated sensors for FNDC3C1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033737Ensembl transcript IDs: ENSMUST00000039447.14, ENSMUST00000138724.8, ENSMUST00000140707.2, ENSMUST00000149331.2
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | ATAACACAGGTTGGACCCTTGCAGGTTAGCACAGGTGTACCACACTaGGAAGGAGGGTGCCGGGCTGGTACAGATCCACACTCCATTGAC | + |
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Preference number: 5 (lower is better) Translates to: ITQVGPLQVSTGVPH*EGGCRAGTDPHSID Trigger: GTCAATGGAGTGTGGATCTGTACCAGCCCGGCACCCTCCTTCTCAGTGTGGTACACCTGTGCTAACCTGCAAGGGTCCAACCTGTGTTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
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| CDS GCA 90 bp | TGGAGAATACAGAAGTTGAGGGGCCTGTGGGTATGTGAGCAATGGTaGTGCTACAAAGGGCTGCTGCACAGGAGCAGTCATGGGCACATG | + |
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Preference number: 5 (lower is better) Translates to: WRIQKLRGLWVCEQW*CYKGLLHRSSHGHM Trigger: CATGTGCCCATGACTGCTCCTGTGCAGCAGCCCTTTGTAGCAGCACCATTGCTCACATACCCACAGGCCCCTCAACTTCTGTATTCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
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| CDS CCA 90 bp | AACTGGAGAATACAGAAGTTGAGGGGCCTGTGGGTATGTGAGCAATaGTGCTGCTACAAAGGGCTGCTGCACAGGAGCAGTCATGGGCAC | + |
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Preference number: 5 (lower is better) Translates to: NWRIQKLRGLWVCEQ*CCYKGLLHRSSHGH Trigger: GTGCCCATGACTGCTCCTGTGCAGCAGCCCTTTGTAGCAGCACCATTGCTCACATACCCACAGGCCCCTCAACTTCTGTATTCTCCAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
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| CDS GCA 90 bp | AGAATACAGAAGTTGAGGGGCCTGTGGGTATGTGAGCAATGGTGCTaGTACAAAGGGCTGCTGCACAGGAGCAGTCATGGGCACATGGTA | + |
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Preference number: 5 (lower is better) Translates to: RIQKLRGLWVCEQWC*YKGLLHRSSHGHMV Trigger: TACCATGTGCCCATGACTGCTCCTGTGCAGCAGCCCTTTGTAGCAGCACCATTGCTCACATACCCACAGGCCCCTCAACTTCTGTATTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
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| CDS CCA 90 bp | TTCTTCCACCACCTGAGACATGTAACCAGGAGGAAGGTATATTGGTaGCAAATTGCCAGTTGGTGCTATCAGAGGTACATCTGCAGGACC | + |
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Preference number: 5 (lower is better) Translates to: FFHHLRHVTRRKVYW*QIASWCYQRYICRT Trigger: GGTCCTGCAGATGTACCTCTGATAGCACCAACTGGCAATTTGCCACCAATATACCTTCCTCCTGGTTACATGTCTCAGGTGGTGGAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039447.14 ENSMUST00000149331.2 |
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| CDS CCA 90 bp | GGCTTTGGCCTGCAGGTGACGTGCAAAAGACTCTCAGTTTATATGTaGTGGCTGCTTGGAGGTCATCATACAGAAATTCCTGTCGAGTAC | + |
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Preference number: 5 (lower is better) Translates to: GFGLQVTCKRLSVYM*WLLGGHHTEIPVEY Trigger: GTACTCGACAGGAATTTCTGTATGATGACCTCCAAGCAGCCACCACATATAAACTGAGAGTCTTTTGCACGTCACCTGCAGGCCAAAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
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| CDS GCA 90 bp | CCACCTGAGACATGTAACCAGGAGGAAGGTATATTGGTGGCAAATTaGCAGTTGGTGCTATCAGAGGTACATCTGCAGGACCTTGAATGT | + |
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Preference number: 5 (lower is better) Translates to: PPETCNQEEGILVAN*QLVLSEVHLQDLEC Trigger: ACATTCAAGGTCCTGCAGATGTACCTCTGATAGCACCAACTGGCAATTTGCCACCAATATACCTTCCTCCTGGTTACATGTCTCAGGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039447.14 ENSMUST00000149331.2 |
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| CDS GCA 90 bp | GAATTGTCAATACATCTGAAGGACGGCTTTGGCCTGCAGGTGACGTaGAAAAGACTCTCAGTTTATATGTGGTGGCTGCTTGGAGGTCAT | + |
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Preference number: 5 (lower is better) Translates to: ELSIHLKDGFGLQVT*KRLSVYMWWLLGGH Trigger: ATGACCTCCAAGCAGCCACCACATATAAACTGAGAGTCTTTTGCACGTCACCTGCAGGCCAAAGCCGTCCTTCAGATGTATTGACAATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
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| CDS CCA 90 bp | CTGTGGTTCTTGTATGTAAGAAGGTACTGGGATTTCCCCTTGAACTaGAGAATACAGAAGTTGAGGGGCCTGTGGGTATGTGAGCAATGG | + |
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Preference number: 5 (lower is better) Translates to: LWFLYVRRYWDFPLN*RIQKLRGLWVCEQW Trigger: CCATTGCTCACATACCCACAGGCCCCTCAACTTCTGTATTCTCCAGTTCAAGGGGAAATCCCAGTACCTTCTTACATACAAGAACCACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
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| CDS CCA 90 bp | TTTGGCCTGCAGGTGACGTGCAAAAGACTCTCAGTTTATATGTGGTaGCTGCTTGGAGGTCATCATACAGAAATTCCTGTCGAGTACCAC | + |
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Preference number: 5 (lower is better) Translates to: FGLQVTCKRLSVYMW*LLGGHHTEIPVEYH Trigger: GTGGTACTCGACAGGAATTTCTGTATGATGACCTCCAAGCAGCCACCACATATAAACTGAGAGTCTTTTGCACGTCACCTGCAGGCCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
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| CDS TCA 90 bp | GCAACATCAGAAGGTCTGAGGCCATCATTTATCGAGGAGGGGTTATaGGCATTTTCAGAGACAGAAGGGTTGCTAGCACTTTGGGAAGTA | + |
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Preference number: 5 (lower is better) Translates to: ATSEGLRPSFIEEGL*AFSETEGLLALWEV Trigger: TACTTCCCAAAGTGCTAGCAACCCTTCTGTCTCTGAAAATGCTCATAACCCCTCCTCGATAAATGATGGCCTCAGACCTTCTGATGTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
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| CDS TCA 90 bp | CTTGAAGACCATTGGAGGTTTCATATCGGCGTCCTGCACAGACCTTaGAGCGGTAGCGTGAATTTGCATGATAGTTGGAAAAGGAAAAGG | + |
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Preference number: 5 (lower is better) Translates to: LEDHWRFHIGVLHRP*SGSVNLHDSWKRKR Trigger: CCTTTTCCTTTTCCAACTATCATGCAAATTCACGCTACCGCTTCAAGGTCTGTGCAGGACGCCGATATGAAACCTCCAATGGTCTTCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
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| CDS CCA 90 bp | ATTTTCTTCCACCACCTGAGACATGTAACCAGGAGGAAGGTATATTaGTGGCAAATTGCCAGTTGGTGCTATCAGAGGTACATCTGCAGG | + |
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Preference number: 5 (lower is better) Translates to: IFFHHLRHVTRRKVY*WQIASWCYQRYICR Trigger: CCTGCAGATGTACCTCTGATAGCACCAACTGGCAATTTGCCACCAATATACCTTCCTCCTGGTTACATGTCTCAGGTGGTGGAAGAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039447.14 ENSMUST00000149331.2 |
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| CDS CCA 90 bp | CTTTGCCATGCCCTGAATGATGCTTATAAGTTGAGAAAAGAGCACTaGGACTATATGGCCCCCACAGCTCTTGAAGACCATTGGAGGTTT | + |
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Preference number: 5 (lower is better) Translates to: LCHALNDAYKLRKEH*DYMAPTALEDHWRF Trigger: AAACCTCCAATGGTCTTCAAGAGCTGTGGGGGCCATATAGTCCCAGTGCTCTTTTCTCAACTTATAAGCATCATTCAGGGCATGGCAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
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| CDS TCA 90 bp | ATCTGCTTATTGTCTCCAGCTCCCATGTTAGCCTCTGTCTCTTCATaGTCATTTTCAGAAATGCTGGCAACATCAGAAGGTCTGAGGCCA | + |
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Preference number: 5 (lower is better) Translates to: ICLLSPAPMLASVSS*SFSEMLATSEGLRP Trigger: TGGCCTCAGACCTTCTGATGTTGCCAGCATTTCTGAAAATGATCATGAAGAGACAGAGGCTAACATGGGAGCTGGAGACAATAAGCAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
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| CDS GCA 90 bp | CATGTAACCAGGAGGAAGGTATATTGGTGGCAAATTGCCAGTTGGTaGTATCAGAGGTACATCTGCAGGACCTTGAATGTTCTGAATGGA | + |
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Preference number: 5 (lower is better) Translates to: HVTRRKVYWWQIASW*YQRYICRTLNVLNG Trigger: TCCATTCAGAACATTCAAGGTCCTGCAGATGTACCTCTGATAGCACCAACTGGCAATTTGCCACCAATATACCTTCCTCCTGGTTACATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039447.14 ENSMUST00000149331.2 |
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| CDS GCA 90 bp | AACCCCAACTATATTCACAGCCTGTACTCTGCAAAAGTATGTGGTTaGAGGAACAAGACCTTTAACTTCATAGCGCAAGCAAGGGCCAGT | + |
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Preference number: 5 (lower is better) Translates to: NPNYIHSLYSAKVCG*RNKTFNFIAQARAS Trigger: ACTGGCCCTTGCTTGCGCTATGAAGTTAAAGGTCTTGTTCCTGCAACCACATACTTTTGCAGAGTACAGGCTGTGAATATAGTTGGGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
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| CDS CCA 90 bp | CCATCCAATTGTCACTTGGTGTGCATGGATCGTTCCCACTACATATaGTTTATTAGGGCATCCAGGCCTAGCTGGACGAGTAGTATATTT | + |
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Preference number: 5 (lower is better) Translates to: PSNCHLVCMDRSHYI*FIRASRPSWTSSIF Trigger: AAATATACTACTCGTCCAGCTAGGCCTGGATGCCCTAATAAACCATATGTAGTGGGAACGATCCATGCACACCAAGTGACAATTGGATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
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| CDS CCA 90 bp | TGGCTCCAAAGACTCCCATTTGATCTCACAAGAGTTGTTATTCAGTaGATGTACTTTTGGTGCTTTCAGTGCAGTGGGTGGGGACTTTGT | + |
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Preference number: 5 (lower is better) Translates to: WLQRLPFDLTRVVIQ*MYFWCFQCSGWGLC Trigger: ACAAAGTCCCCACCCACTGCACTGAAAGCACCAAAAGTACATCCACTGAATAACAACTCTTGTGAGATCAAATGGGAGTCTTTGGAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
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| CDS GCA 90 bp | GTATATTGGTGGCAAATTGCCAGTTGGTGCTATCAGAGGTACATCTaGAGGACCTTGAATGTTCTGAATGGAGCCATCATCAGCCTTTAT | + |
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Preference number: 5 (lower is better) Translates to: VYWWQIASWCYQRYI*RTLNVLNGAIISLY Trigger: ATAAAGGCTGATGATGGCTCCATTCAGAACATTCAAGGTCCTGCAGATGTACCTCTGATAGCACCAACTGGCAATTTGCCACCAATATAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039447.14 ENSMUST00000149331.2 |
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| CDS GCA 90 bp | CATCACTCATCTCTGTCTTGCACTTTTCACCTTTGTCATTATGGTTaGCTTTTCCTTTACTCCCACTGCCTTTGCCATGCCCTGAATGAT | + |
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Preference number: 5 (lower is better) Translates to: HHSSLSCTFHLCHYG*LFLYSHCLCHALND Trigger: ATCATTCAGGGCATGGCAAAGGCAGTGGGAGTAAAGGAAAAGGCAACCATAATGACAAAGGTGAAAAGTGCAAGACAGAGATGAGTGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
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| CDS CCA 90 bp | AGACATGTAACCAGGAGGAAGGTATATTGGTGGCAAATTGCCAGTTaGTGCTATCAGAGGTACATCTGCAGGACCTTGAATGTTCTGAAT | + |
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Preference number: 5 (lower is better) Translates to: RHVTRRKVYWWQIAS*CYQRYICRTLNVLN Trigger: ATTCAGAACATTCAAGGTCCTGCAGATGTACCTCTGATAGCACCAACTGGCAATTTGCCACCAATATACCTTCCTCCTGGTTACATGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039447.14 ENSMUST00000149331.2 |
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| CDS CCA 90 bp | TTCATTCCACCGTTGTCTTTGGGTAAGTCCCATCCAATTGTCACTTaGTGTGCATGGATCGTTCCCACTACATATGGTTTATTAGGGCAT | + |
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Preference number: 5 (lower is better) Translates to: FIPPLSLGKSHPIVT*CAWIVPTTYGLLGH Trigger: ATGCCCTAATAAACCATATGTAGTGGGAACGATCCATGCACACCAAGTGACAATTGGATGGGACTTACCCAAAGACAACGGTGGAATGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
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| CDS CCA 90 bp | AAACTTCTAGGCTGTAACTTGAGATGTTCATTCCACCGTTGTCTTTaGGTAAGTCCCATCCAATTGTCACTTGGTGTGCATGGATCGTTC | + |
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Preference number: 5 (lower is better) Translates to: KLLGCNLRCSFHRCL*VSPIQLSLGVHGSF Trigger: GAACGATCCATGCACACCAAGTGACAATTGGATGGGACTTACCCAAAGACAACGGTGGAATGAACATCTCAAGTTACAGCCTAGAAGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
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| CDS CCA 90 bp | GTATCATCACTCATCTCTGTCTTGCACTTTTCACCTTTGTCATTATaGTTGCCTTTTCCTTTACTCCCACTGCCTTTGCCATGCCCTGAA | + |
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Preference number: 5 (lower is better) Translates to: VSSLISVLHFSPLSL*LPFPLLPLPLPCPE Trigger: TTCAGGGCATGGCAAAGGCAGTGGGAGTAAAGGAAAAGGCAACCATAATGACAAAGGTGAAAAGTGCAAGACAGAGATGAGTGATGATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
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| CDS GCA 90 bp | CCATTTGATCTCACAAGAGTTGTTATTCAGTGGATGTACTTTTGGTaGTTTCAGTGCAGTGGGTGGGGACTTTGTAGTAGTGAAAGTGTA | + |
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Preference number: 5 (lower is better) Translates to: PFDLTRVVIQWMYFW*FQCSGWGLCSSESV Trigger: TACACTTTCACTACTACAAAGTCCCCACCCACTGCACTGAAAGCACCAAAAGTACATCCACTGAATAACAACTCTTGTGAGATCAAATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
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| CDS TCA 90 bp | TTGTCAGAGCAAAAAGTAGCATTTGAGGTAGAAATGCTTGGGGTATaGGCAGAAGAACTAGTGATTGTGTCAGTAGTGTTAGTGTCTGGA | + |
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Preference number: 5 (lower is better) Translates to: LSEQKVAFEVEMLGV*AEELVIVSVVLVSG Trigger: TCCAGACACTAACACTACTGACACAATCACTAGTTCTTCTGCTCATACCCCAAGCATTTCTACCTCAAATGCTACTTTTTGCTCTGACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
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| CDS CCA 90 bp | GTTGCTAGCACTTTGGGAAGTACAGCTTGGAATACTCTTAGCATCTaGTGGTTTGTGAGTTTCATCATAGGTGACTTGATTGTAATTACT | + |
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Preference number: 5 (lower is better) Translates to: VASTLGSTAWNTLSI*WFVSFIIGDLIVIT Trigger: AGTAATTACAATCAAGTCACCTATGATGAAACTCACAAACCACCAGATGCTAAGAGTATTCCAAGCTGTACTTCCCAAAGTGCTAGCAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
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| CDS TCA 72 bp | GTTGGACCCTTGCAGGTTAGCACAGGTGTACCACACTaGGAAGGAGGGTGCCGGGCTGGTACAGATCCACAC | + |
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Preference number: 6 (lower is better) Translates to: VGPLQVSTGVPH*EGGCRAGTDPH Trigger: GTGTGGATCTGTACCAGCCCGGCACCCTCCTTCTCAGTGTGGTACACCTGTGCTAACCTGCAAGGGTCCAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
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| CDS GCA 72 bp | AAGTTGAGGGGCCTGTGGGTATGTGAGCAATGGTGCTaGTACAAAGGGCTGCTGCACAGGAGCAGTCATGGG | + |
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Preference number: 6 (lower is better) Translates to: KLRGLWVCEQWC*YKGLLHRSSHG Trigger: CCCATGACTGCTCCTGTGCAGCAGCCCTTTGTAGCAGCACCATTGCTCACATACCCACAGGCCCCTCAACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
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| CDS GCA 72 bp | CAGAAGTTGAGGGGCCTGTGGGTATGTGAGCAATGGTaGTGCTACAAAGGGCTGCTGCACAGGAGCAGTCAT | + |
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Preference number: 6 (lower is better) Translates to: QKLRGLWVCEQW*CYKGLLHRSSH Trigger: ATGACTGCTCCTGTGCAGCAGCCCTTTGTAGCAGCACCATTGCTCACATACCCACAGGCCCCTCAACTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
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| CDS CCA 72 bp | CCCTTGAACTGGAGAATACAGAAGTTGAGGGGCCTGTaGGTATGTGAGCAATGGTGCTGCTACAAAGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: PLNWRIQKLRGL*VCEQWCCYKGL Trigger: CAGCCCTTTGTAGCAGCACCATTGCTCACATACCCACAGGCCCCTCAACTTCTGTATTCTCCAGTTCAAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
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| CDS TCA 72 bp | AGGAGGGTGCCGGGCTGGTACAGATCCACACTCCATTaGCTGAGATCCAAGTGCACATTTCTTTTCAGAGCT | + |
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Preference number: 6 (lower is better) Translates to: RRVPGWYRSTLH*LRSKCTFLFRA Trigger: AGCTCTGAAAAGAAATGTGCACTTGGATCTCAGTCAATGGAGTGTGGATCTGTACCAGCCCGGCACCCTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
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| CDS CAA 72 bp | TACTGGGATTTCCCCTTGAACTGGAGAATACAGAAGTaGAGGGGCCTGTGGGTATGTGAGCAATGGTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: YWDFPLNWRIQK*RGLWVCEQWCC Trigger: GCAGCACCATTGCTCACATACCCACAGGCCCCTCAACTTCTGTATTCTCCAGTTCAAGGGGAAATCCCAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
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| CDS CAA 72 bp | AAGGAGGGTGCCGGGCTGGTACAGATCCACACTCCATaGACTGAGATCCAAGTGCACATTTCTTTTCAGAGC | + |
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Preference number: 6 (lower is better) Translates to: KEGAGLVQIHTP*TEIQVHISFQS Trigger: GCTCTGAAAAGAAATGTGCACTTGGATCTCAGTCAATGGAGTGTGGATCTGTACCAGCCCGGCACCCTCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
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| CDS CAA 90 bp | GTAAGAAGGTACTGGGATTTCCCCTTGAACTGGAGAATACAGAAGTaGAGGGGCCTGTGGGTATGTGAGCAATGGTGCTGCTACAAAGGG | + |
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Preference number: 6 (lower is better) Translates to: VRRYWDFPLNWRIQK*RGLWVCEQWCCYKG Trigger: CCCTTTGTAGCAGCACCATTGCTCACATACCCACAGGCCCCTCAACTTCTGTATTCTCCAGTTCAAGGGGAAATCCCAGTACCTTCTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
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| CDS CAA 90 bp | ACATGTGCTTCCGGCTTCCCATTAACAGAACGATTGTCAGGAAGGTaGGCATCCTTGCTCTTGGTTTTACCACGTAAGGGCTGTGAACGG | + |
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Preference number: 6 (lower is better) Translates to: TCASGFPLTERLSGR*ASLLLVLPRKGCER Trigger: CCGTTCACAGCCCTTACGTGGTAAAACCAAGAGCAAGGATGCCAACCTTCCTGACAATCGTTCTGTTAATGGGAAGCCGGAAGCACATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
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| CDS CCA 72 bp | TGTCACTTGGTGTGCATGGATCGTTCCCACTACATATaGTTTATTAGGGCATCCAGGCCTAGCTGGACGAGT | + |
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Preference number: 6 (lower is better) Translates to: CHLVCMDRSHYI*FIRASRPSWTS Trigger: ACTCGTCCAGCTAGGCCTGGATGCCCTAATAAACCATATGTAGTGGGAACGATCCATGCACACCAAGTGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
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| CDS CCA 72 bp | CAGAACGATTGTCAGGAAGGTTGGCATCCTTGCTCTTaGTTTTACCACGTAAGGGCTGTGAACGGCAAGACT | + |
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Preference number: 6 (lower is better) Translates to: QNDCQEGWHPCS*FYHVRAVNGKT Trigger: AGTCTTGCCGTTCACAGCCCTTACGTGGTAAAACCAAGAGCAAGGATGCCAACCTTCCTGACAATCGTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
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| CDS CAA 72 bp | ACAGAACGATTGTCAGGAAGGTTGGCATCCTTGCTCTaGGTTTTACCACGTAAGGGCTGTGAACGGCAAGAC | + |
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Preference number: 6 (lower is better) Translates to: TERLSGRLASLL*VLPRKGCERQD Trigger: GTCTTGCCGTTCACAGCCCTTACGTGGTAAAACCAAGAGCAAGGATGCCAACCTTCCTGACAATCGTTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
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| CDS CAA 72 bp | TCCGGCTTCCCATTAACAGAACGATTGTCAGGAAGGTaGGCATCCTTGCTCTTGGTTTTACCACGTAAGGGC | + |
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Preference number: 6 (lower is better) Translates to: SGFPLTERLSGR*ASLLLVLPRKG Trigger: GCCCTTACGTGGTAAAACCAAGAGCAAGGATGCCAACCTTCCTGACAATCGTTCTGTTAATGGGAAGCCGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
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| CDS CAA 72 bp | CCACCACCTGAGACATGTAACCAGGAGGAAGGTATATaGGTGGCAAATTGCCAGTTGGTGCTATCAGAGGTA | + |
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Preference number: 6 (lower is better) Translates to: PPPETCNQEEGI*VANCQLVLSEV Trigger: TACCTCTGATAGCACCAACTGGCAATTTGCCACCAATATACCTTCCTCCTGGTTACATGTCTCAGGTGGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039447.14 ENSMUST00000149331.2 |
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| CDS CAA 72 bp | CGCACATGTGCTTCCGGCTTCCCATTAACAGAACGATaGTCAGGAAGGTTGGCATCCTTGCTCTTGGTTTTA | + |
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Preference number: 6 (lower is better) Translates to: RTCASGFPLTER*SGRLASLLLVL Trigger: TAAAACCAAGAGCAAGGATGCCAACCTTCCTGACAATCGTTCTGTTAATGGGAAGCCGGAAGCACATGTGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
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| CDS CAA 90 bp | GATCTGCTGTGGTTCTTGTATGTAAGAAGGTACTGGGATTTCCCCTaGAACTGGAGAATACAGAAGTTGAGGGGCCTGTGGGTATGTGAG | + |
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Preference number: 6 (lower is better) Translates to: DLLWFLYVRRYWDFP*NWRIQKLRGLWVCE Trigger: CTCACATACCCACAGGCCCCTCAACTTCTGTATTCTCCAGTTCAAGGGGAAATCCCAGTACCTTCTTACATACAAGAACCACAGCAGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
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| CDS CAA 90 bp | TTTTTGCCACGCACATGTGCTTCCGGCTTCCCATTAACAGAACGATaGTCAGGAAGGTTGGCATCCTTGCTCTTGGTTTTACCACGTAAG | + |
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Preference number: 6 (lower is better) Translates to: FLPRTCASGFPLTER*SGRLASLLLVLPRK Trigger: CTTACGTGGTAAAACCAAGAGCAAGGATGCCAACCTTCCTGACAATCGTTCTGTTAATGGGAAGCCGGAAGCACATGTGCGTGGCAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
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| CDS CAA 90 bp | CTTTACTCCCACTGCCTTTGCCATGCCCTGAATGATGCTTATAAGTaGAGAAAAGAGCACTGGGACTATATGGCCCCCACAGCTCTTGAA | + |
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Preference number: 6 (lower is better) Translates to: LYSHCLCHALNDAYK*RKEHWDYMAPTALE Trigger: TTCAAGAGCTGTGGGGGCCATATAGTCCCAGTGCTCTTTTCTCAACTTATAAGCATCATTCAGGGCATGGCAAAGGCAGTGGGAGTAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
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| CDS CAA 90 bp | CATTTTCTTCCACCACCTGAGACATGTAACCAGGAGGAAGGTATATaGGTGGCAAATTGCCAGTTGGTGCTATCAGAGGTACATCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: HFLPPPETCNQEEGI*VANCQLVLSEVHLQ Trigger: CTGCAGATGTACCTCTGATAGCACCAACTGGCAATTTGCCACCAATATACCTTCCTCCTGGTTACATGTCTCAGGTGGTGGAAGAAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039447.14 ENSMUST00000149331.2 |
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| CDS GCA 72 bp | TGGCAAATTGCCAGTTGGTGCTATCAGAGGTACATCTaGAGGACCTTGAATGTTCTGAATGGAGCCATCATC | + |
|
Preference number: 6 (lower is better) Translates to: WQIASWCYQRYI*RTLNVLNGAII Trigger: GATGATGGCTCCATTCAGAACATTCAAGGTCCTGCAGATGTACCTCTGATAGCACCAACTGGCAATTTGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039447.14 ENSMUST00000149331.2 |
||
| CDS GCA 72 bp | ACATGTAACCAGGAGGAAGGTATATTGGTGGCAAATTaGCAGTTGGTGCTATCAGAGGTACATCTGCAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: TCNQEEGILVAN*QLVLSEVHLQD Trigger: GTCCTGCAGATGTACCTCTGATAGCACCAACTGGCAATTTGCCACCAATATACCTTCCTCCTGGTTACATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039447.14 ENSMUST00000149331.2 |
||
| CDS CCA 72 bp | ACCAGGAGGAAGGTATATTGGTGGCAAATTGCCAGTTaGTGCTATCAGAGGTACATCTGCAGGACCTTGAAT | + |
|
Preference number: 6 (lower is better) Translates to: TRRKVYWWQIAS*CYQRYICRTLN Trigger: ATTCAAGGTCCTGCAGATGTACCTCTGATAGCACCAACTGGCAATTTGCCACCAATATACCTTCCTCCTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039447.14 ENSMUST00000149331.2 |
||
| CDS CCA 72 bp | CACCTGAGACATGTAACCAGGAGGAAGGTATATTGGTaGCAAATTGCCAGTTGGTGCTATCAGAGGTACATC | + |
|
Preference number: 6 (lower is better) Translates to: HLRHVTRRKVYW*QIASWCYQRYI Trigger: GATGTACCTCTGATAGCACCAACTGGCAATTTGCCACCAATATACCTTCCTCCTGGTTACATGTCTCAGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039447.14 ENSMUST00000149331.2 |
||
| CDS CCA 72 bp | TTGACTGAGATCCAAGTGCACATTTCTTTTCAGAGCTaGGGTGCACCTTTCTGTCCTGATGAGGACCTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: LTEIQVHISFQS*GAPFCPDEDLL Trigger: CAAAAGGTCCTCATCAGGACAGAAAGGTGCACCCCAGCTCTGAAAAGAAATGTGCACTTGGATCTCAGTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
||
| CDS CAA 72 bp | GCCAGTTGGTGCTATCAGAGGTACATCTGCAGGACCTaGAATGTTCTGAATGGAGCCATCATCAGCCTTTAT | + |
|
Preference number: 6 (lower is better) Translates to: ASWCYQRYICRT*NVLNGAIISLY Trigger: ATAAAGGCTGATGATGGCTCCATTCAGAACATTCAAGGTCCTGCAGATGTACCTCTGATAGCACCAACTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039447.14 ENSMUST00000149331.2 |
||
| CDS CAA 72 bp | AACCAGGAGGAAGGTATATTGGTGGCAAATTGCCAGTaGGTGCTATCAGAGGTACATCTGCAGGACCTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: NQEEGILVANCQ*VLSEVHLQDLE Trigger: TTCAAGGTCCTGCAGATGTACCTCTGATAGCACCAACTGGCAATTTGCCACCAATATACCTTCCTCCTGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039447.14 ENSMUST00000149331.2 |
||
| CDS CAA 72 bp | TGGTTCTTGTATGTAAGAAGGTACTGGGATTTCCCCTaGAACTGGAGAATACAGAAGTTGAGGGGCCTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: WFLYVRRYWDFP*NWRIQKLRGLW Trigger: CCACAGGCCCCTCAACTTCTGTATTCTCCAGTTCAAGGGGAAATCCCAGTACCTTCTTACATACAAGAACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
||
| CDS CAA 90 bp | TGGCAAATTGCCAGTTGGTGCTATCAGAGGTACATCTGCAGGACCTaGAATGTTCTGAATGGAGCCATCATCAGCCTTTATGGTAAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: WQIASWCYQRYICRT*NVLNGAIISLYGKD Trigger: ATCCTTACCATAAAGGCTGATGATGGCTCCATTCAGAACATTCAAGGTCCTGCAGATGTACCTCTGATAGCACCAACTGGCAATTTGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039447.14 ENSMUST00000149331.2 |
||
| CDS CAA 90 bp | GAGACATGTAACCAGGAGGAAGGTATATTGGTGGCAAATTGCCAGTaGGTGCTATCAGAGGTACATCTGCAGGACCTTGAATGTTCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: ETCNQEEGILVANCQ*VLSEVHLQDLECSE Trigger: TTCAGAACATTCAAGGTCCTGCAGATGTACCTCTGATAGCACCAACTGGCAATTTGCCACCAATATACCTTCCTCCTGGTTACATGTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039447.14 ENSMUST00000149331.2 |
||
| CDS CAA 90 bp | GCGCAAGCAAGGGCCAGTGTAAATCAAATGCATGGAATCTTCAACTaGTCCCCATTGCAGTCGGTAATCAATGATTTCAGCACCATTGCA | + |
|
Preference number: 6 (lower is better) Translates to: AQARASVNQMHGIFN*SPLQSVINDFSTIA Trigger: TGCAATGGTGCTGAAATCATTGATTACCGACTGCAATGGGGACAAGTTGAAGATTCCATGCATTTGATTTACACTGGCCCTTGCTTGCGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
||
| CDS CAA 90 bp | TCCCAGCGGATAGCTATGCAAGTTGATGACAGCTTGGCAGGCACTTaGCTTTCAACTTCTTTTAATACTGGAACCATTGCTGGGACAGTT | + |
|
Preference number: 6 (lower is better) Translates to: SQRIAMQVDDSLAGT*LSTSFNTGTIAGTV Trigger: AACTGTCCCAGCAATGGTTCCAGTATTAAAAGAAGTTGAAAGCAAAGTGCCTGCCAAGCTGTCATCAACTTGCATAGCTATCCGCTGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
||
| CDS GCA 72 bp | GATCAGGAGGTATTGAACGGCAACAGCACACAAAACTaGAATAAGTGCGAACCCTATCAGAAGGGTAAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: DQEVLNGNSTQN*NKCEPYQKGKN Trigger: GTTCTTACCCTTCTGATAGGGTTCGCACTTATTGCAGTTTTGTGTGCTGTTGCCGTTCAATACCTCCTGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
||
| CDS CCA 72 bp | TTGTATGTAAGAAGGTACTGGGATTTCCCCTTGAACTaGAGAATACAGAAGTTGAGGGGCCTGTGGGTATGT | + |
|
Preference number: 6 (lower is better) Translates to: LYVRRYWDFPLN*RIQKLRGLWVC Trigger: ACATACCCACAGGCCCCTCAACTTCTGTATTCTCCAGTTCAAGGGGAAATCCCAGTACCTTCTTACATACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
||
| CDS CCA 72 bp | CGGGATCTGCTGTGGTTCTTGTATGTAAGAAGGTACTaGGATTTCCCCTTGAACTGGAGAATACAGAAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: RDLLWFLYVRRY*DFPLNWRIQKL Trigger: CAACTTCTGTATTCTCCAGTTCAAGGGGAAATCCCAGTACCTTCTTACATACAAGAACCACAGCAGATCCCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
||
| CDS CCA 72 bp | CCGTTGTCTTTGGGTAAGTCCCATCCAATTGTCACTTaGTGTGCATGGATCGTTCCCACTACATATGGTTTA | + |
|
Preference number: 6 (lower is better) Translates to: PLSLGKSHPIVT*CAWIVPTTYGL Trigger: TAAACCATATGTAGTGGGAACGATCCATGCACACCAAGTGACAATTGGATGGGACTTACCCAAAGACAACGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
||
| CDS CCA 72 bp | GGCTGTAACTTGAGATGTTCATTCCACCGTTGTCTTTaGGTAAGTCCCATCCAATTGTCACTTGGTGTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: GCNLRCSFHRCL*VSPIQLSLGVH Trigger: ATGCACACCAAGTGACAATTGGATGGGACTTACCCAAAGACAACGGTGGAATGAACATCTCAAGTTACAGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
||
| CDS CCA 72 bp | CTGCAGGTGACGTGCAAAAGACTCTCAGTTTATATGTaGTGGCTGCTTGGAGGTCATCATACAGAAATTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LQVTCKRLSVYM*WLLGGHHTEIP Trigger: AGGAATTTCTGTATGATGACCTCCAAGCAGCCACCACATATAAACTGAGAGTCTTTTGCACGTCACCTGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
||
| CDS CCA 72 bp | CATAGCGCAAGCAAGGGCCAGTGTAAATCAAATGCATaGAATCTTCAACTTGTCCCCATTGCAGTCGGTAAT | + |
|
Preference number: 6 (lower is better) Translates to: HSASKGQCKSNA*NLQLVPIAVGN Trigger: ATTACCGACTGCAATGGGGACAAGTTGAAGATTCCATGCATTTGATTTACACTGGCCCTTGCTTGCGCTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
||
| CDS CCA 72 bp | CAGTGGATGTACTTTTGGTGCTTTCAGTGCAGTGGGTaGGGACTTTGTAGTAGTGAAAGTGTAGATGTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: QWMYFWCFQCSG*GLCSSESVDVR Trigger: TCTGACATCTACACTTTCACTACTACAAAGTCCCCACCCACTGCACTGAAAGCACCAAAAGTACATCCACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
||
| CDS TCA 72 bp | GATCATTTTCAGAAATGCTGGCAACATCAGAAGGTCTaGGGCCATCATTTATCGAGGAGGGGTTATGAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: DHFQKCWQHQKV*GHHLSRRGYEH Trigger: ATGCTCATAACCCCTCCTCGATAAATGATGGCCTCAGACCTTCTGATGTTGCCAGCATTTCTGAAAATGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
||
| CDS TCA 72 bp | TTGTCTCCAGCTCCCATGTTAGCCTCTGTCTCTTCATaGTCATTTTCAGAAATGCTGGCAACATCAGAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: LSPAPMLASVSS*SFSEMLATSEG Trigger: ACCTTCTGATGTTGCCAGCATTTCTGAAAATGATCATGAAGAGACAGAGGCTAACATGGGAGCTGGAGACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
||
| CDS GCA 72 bp | CTCACAAGAGTTGTTATTCAGTGGATGTACTTTTGGTaGTTTCAGTGCAGTGGGTGGGGACTTTGTAGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: LTRVVIQWMYFW*FQCSGWGLCSS Trigger: ACTACTACAAAGTCCCCACCCACTGCACTGAAAGCACCAAAAGTACATCCACTGAATAACAACTCTTGTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
||
| CDS CCA 72 bp | GATCTCACAAGAGTTGTTATTCAGTGGATGTACTTTTaGTGCTTTCAGTGCAGTGGGTGGGGACTTTGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: DLTRVVIQWMYF*CFQCSGWGLCS Trigger: ACTACAAAGTCCCCACCCACTGCACTGAAAGCACCAAAAGTACATCCACTGAATAACAACTCTTGTGAGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
||
| CDS CCA 72 bp | AGACTCCCATTTGATCTCACAAGAGTTGTTATTCAGTaGATGTACTTTTGGTGCTTTCAGTGCAGTGGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: RLPFDLTRVVIQ*MYFWCFQCSGW Trigger: CCACCCACTGCACTGAAAGCACCAAAAGTACATCCACTGAATAACAACTCTTGTGAGATCAAATGGGAGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
||
| CDS CAA 72 bp | AGACTATCAGGAGGAGCAGGCATGTCAATGTCTTTGTaGAGAAGCAAAGTGGTGTCACTAAAAGTGGAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: RLSGGAGMSMSL*RSKVVSLKVEL Trigger: CAACTCCACTTTTAGTGACACCACTTTGCTTCTCAACAAAGACATTGACATGCCTGCTCCTCCTGATAGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
||
| CDS CAA 72 bp | TCCTCCCAGCGGATAGCTATGCAAGTTGATGACAGCTaGGCAGGCACTTTGCTTTCAACTTCTTTTAATACT | + |
|
Preference number: 6 (lower is better) Translates to: SSQRIAMQVDDS*AGTLLSTSFNT Trigger: AGTATTAAAAGAAGTTGAAAGCAAAGTGCCTGCCAAGCTGTCATCAACTTGCATAGCTATCCGCTGGGAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
||
| CDS CAA 72 bp | ATCTCTGTCTTGCACTTTTCACCTTTGTCATTATGGTaGCCTTTTCCTTTACTCCCACTGCCTTTGCCATGC | + |
|
Preference number: 6 (lower is better) Translates to: ISVLHFSPLSLW*PFPLLPLPLPC Trigger: GCATGGCAAAGGCAGTGGGAGTAAAGGAAAAGGCAACCATAATGACAAAGGTGAAAAGTGCAAGACAGAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
||
| CDS CAA 90 bp | TTGAGATGTTCATTCCACCGTTGTCTTTGGGTAAGTCCCATCCAATaGTCACTTGGTGTGCATGGATCGTTCCCACTACATATGGTTTAT | + |
|
Preference number: 6 (lower is better) Translates to: LRCSFHRCLWVSPIQ*SLGVHGSFPLHMVY Trigger: ATAAACCATATGTAGTGGGAACGATCCATGCACACCAAGTGACAATTGGATGGGACTTACCCAAAGACAACGGTGGAATGAACATCTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
||
| CDS CAA 90 bp | AGAACGAAGGTATCATCACTCATCTCTGTCTTGCACTTTTCACCTTaGTCATTATGGTTGCCTTTTCCTTTACTCCCACTGCCTTTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: RTKVSSLISVLHFSP*SLWLPFPLLPLPLP Trigger: TGGCAAAGGCAGTGGGAGTAAAGGAAAAGGCAACCATAATGACAAAGGTGAAAAGTGCAAGACAGAGATGAGTGATGATACCTTCGTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
||
| CDS GCA 72 bp | CTTTGTCATTATGGTTGCCTTTTCCTTTACTCCCACTaGCTTTGCCATGCCCTGAATGATGCTTATAAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: LCHYGCLFLYSH*LCHALNDAYKL Trigger: CAACTTATAAGCATCATTCAGGGCATGGCAAAGGCAGTGGGAGTAAAGGAAAAGGCAACCATAATGACAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
||
| CDS CAA 72 bp | AGGGCCAGTGTAAATCAAATGCATGGAATCTTCAACTaGTCCCCATTGCAGTCGGTAATCAATGATTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RASVNQMHGIFN*SPLQSVINDFS Trigger: GCTGAAATCATTGATTACCGACTGCAATGGGGACAAGTTGAAGATTCCATGCATTTGATTTACACTGGCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
||
| CDS GCA 72 bp | TATATTCACAGCCTGTACTCTGCAAAAGTATGTGGTTaGAGGAACAAGACCTTTAACTTCATAGCGCAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: YIHSLYSAKVCG*RNKTFNFIAQA Trigger: TGCTTGCGCTATGAAGTTAAAGGTCTTGTTCCTGCAACCACATACTTTTGCAGAGTACAGGCTGTGAATATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
||
| CDS CAA 72 bp | TTGTTGAGAAGCAAAGTGGTGTCACTAAAAGTGGAGTaGATCTTGTGTTCACCAAGTTGGCGATCTCTTATC | + |
|
Preference number: 6 (lower is better) Translates to: LLRSKVVSLKVE*ILCSPSWRSLI Trigger: GATAAGAGATCGCCAACTTGGTGAACACAAGATCAACTCCACTTTTAGTGACACCACTTTGCTTCTCAACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
||
| CDS CAA 72 bp | CTAGTGATTGTGTCAGTAGTGTTAGTGTCTGGAATATaGTCAGCCATGTTTCTTGGAGCACTGTCAATAGTG | + |
|
Preference number: 6 (lower is better) Translates to: LVIVSVVLVSGI*SAMFLGALSIV Trigger: CACTATTGACAGTGCTCCAAGAAACATGGCTGACAATATTCCAGACACTAACACTACTGACACAATCACTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
||
| CDS CAA 72 bp | GTATCATCACTCATCTCTGTCTTGCACTTTTCACCTTaGTCATTATGGTTGCCTTTTCCTTTACTCCCACTG | + |
|
Preference number: 6 (lower is better) Translates to: VSSLISVLHFSP*SLWLPFPLLPL Trigger: CAGTGGGAGTAAAGGAAAAGGCAACCATAATGACAAAGGTGAAAAGTGCAAGACAGAGATGAGTGATGATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
||
| CDS CAA 90 bp | GCAGAAGAACTAGTGATTGTGTCAGTAGTGTTAGTGTCTGGAATATaGTCAGCCATGTTTCTTGGAGCACTGTCAATAGTGCAAGTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: AEELVIVSVVLVSGI*SAMFLGALSIVQVF Trigger: AAACACTTGCACTATTGACAGTGCTCCAAGAAACATGGCTGACAATATTCCAGACACTAACACTACTGACACAATCACTAGTTCTTCTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
||
| CDS CAA 90 bp | AGGGCCAGTGTAAATCAAATGCATGGAATCTTCAACTTGTCCCCATaGCAGTCGGTAATCAATGATTTCAGCACCATTGCATTTAGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: RASVNQMHGIFNLSP*QSVINDFSTIAFRN Trigger: ATTCCTAAATGCAATGGTGCTGAAATCATTGATTACCGACTGCAATGGGGACAAGTTGAAGATTCCATGCATTTGATTTACACTGGCCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
||
| CDS CAA 90 bp | TCATCCCATTCCAAAAGAAAGCTGCTTATTTTGGATCCATTATCATaGGAAGCTTTCCATTGTAAACTCAGGCTGTTCTTGGTTCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SSHSKRKLLILDPLS*EAFHCKLRLFLVLL Trigger: CAGCAGAACCAAGAACAGCCTGAGTTTACAATGGAAAGCTTCCAATGATAATGGATCCAAAATAAGCAGCTTTCTTTTGGAATGGGATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
||
| CDS CAA 90 bp | TCTTCACCTTTACCCTCATCCCATTCCAAAAGAAAGCTGCTTATTTaGGATCCATTATCATTGGAAGCTTTCCATTGTAAACTCAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SSPLPSSHSKRKLLI*DPLSLEAFHCKLRL Trigger: CAGCCTGAGTTTACAATGGAAAGCTTCCAATGATAATGGATCCAAAATAAGCAGCTTTCTTTTGGAATGGGATGAGGGTAAAGGTGAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
||
| CDS CCA 72 bp | TTGGGAAGTACAGCTTGGAATACTCTTAGCATCTGGTaGTTTGTGAGTTTCATCATAGGTGACTTGATTGTA | + |
|
Preference number: 6 (lower is better) Translates to: LGSTAWNTLSIW*FVSFIIGDLIV Trigger: TACAATCAAGTCACCTATGATGAAACTCACAAACCACCAGATGCTAAGAGTATTCCAAGCTGTACTTCCCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
||
| CDS CCA 72 bp | ACTTTGGGAAGTACAGCTTGGAATACTCTTAGCATCTaGTGGTTTGTGAGTTTCATCATAGGTGACTTGATT | + |
|
Preference number: 6 (lower is better) Translates to: TLGSTAWNTLSI*WFVSFIIGDLI Trigger: AATCAAGTCACCTATGATGAAACTCACAAACCACCAGATGCTAAGAGTATTCCAAGCTGTACTTCCCAAAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
||
| CDS CCA 72 bp | TCAGACTCTGGTCCTTCCCCAGCTTCATTACATGCCTaGATTTTAAACTTGTATTCTGTATACTCACTCAAT | + |
|
Preference number: 6 (lower is better) Translates to: SDSGPSPASLHA*ILNLYSVYSLN Trigger: ATTGAGTGAGTATACAGAATACAAGTTTAAAATCCAGGCATGTAATGAAGCTGGGGAAGGACCAGAGTCTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
||
| CDS CAA 72 bp | AGGGTTAACTTGAACAAATACAATTTGAGACCAGTATaGGGGACACGTCCAGGTGTTATACATCTTATGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RVNLNKYNLRPV*GTRPGVIHLML Trigger: CAGCATAAGATGTATAACACCTGGACGTGTCCCCAATACTGGTCTCAAATTGTATTTGTTCAAGTTAACCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039447.14 ENSMUST00000138724.8 ENSMUST00000140707.2 ENSMUST00000149331.2 |
||
| CDS CAA 72 bp | AAGGATTTCTCCAGGGTTAACTTGAACAAATACAATTaGAGACCAGTATTGGGGACACGTCCAGGTGTTATA | + |
|
Preference number: 6 (lower is better) Translates to: KDFSRVNLNKYN*RPVLGTRPGVI Trigger: TATAACACCTGGACGTGTCCCCAATACTGGTCTCAAATTGTATTTGTTCAAGTTAACCCTGGAGAAATCCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039447.14 ENSMUST00000138724.8 ENSMUST00000140707.2 ENSMUST00000149331.2 |
||
| CDS CAA 72 bp | GTAAATCAAATGCATGGAATCTTCAACTTGTCCCCATaGCAGTCGGTAATCAATGATTTCAGCACCATTGCA | + |
|
Preference number: 6 (lower is better) Translates to: VNQMHGIFNLSP*QSVINDFSTIA Trigger: TGCAATGGTGCTGAAATCATTGATTACCGACTGCAATGGGGACAAGTTGAAGATTCCATGCATTTGATTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
||
| CDS CAA 72 bp | AGGGTAAGAACGAAGGTATCATCACTCATCTCTGTCTaGCACTTTTCACCTTTGTCATTATGGTTGCCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: RVRTKVSSLISV*HFSPLSLWLPF Trigger: AAAAGGCAACCATAATGACAAAGGTGAAAAGTGCAAGACAGAGATGAGTGATGATACCTTCGTTCTTACCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
||
| CDS CAA 90 bp | GATTTCTCCAGGGTTAACTTGAACAAATACAATTTGAGACCAGTATaGGGGACACGTCCAGGTGTTATACATCTTATGCTGAGTCATAAT | + |
|
Preference number: 6 (lower is better) Translates to: DFSRVNLNKYNLRPV*GTRPGVIHLMLSHN Trigger: ATTATGACTCAGCATAAGATGTATAACACCTGGACGTGTCCCCAATACTGGTCTCAAATTGTATTTGTTCAAGTTAACCCTGGAGAAATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039447.14 ENSMUST00000138724.8 ENSMUST00000140707.2 ENSMUST00000149331.2 |
||
| CDS CAA 90 bp | CTTTATGGTAAGGATTTCTCCAGGGTTAACTTGAACAAATACAATTaGAGACCAGTATTGGGGACACGTCCAGGTGTTATACATCTTATG | + |
|
Preference number: 6 (lower is better) Translates to: LYGKDFSRVNLNKYN*RPVLGTRPGVIHLM Trigger: CATAAGATGTATAACACCTGGACGTGTCCCCAATACTGGTCTCAAATTGTATTTGTTCAAGTTAACCCTGGAGAAATCCTTACCATAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039447.14 ENSMUST00000138724.8 ENSMUST00000140707.2 ENSMUST00000149331.2 |
||
| CDS CAA 90 bp | TCAATGTCTTTGTTGAGAAGCAAAGTGGTGTCACTAAAAGTGGAGTaGATCTTGTGTTCACCAAGTTGGCGATCTCTTATCTTCTTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: SMSLLRSKVVSLKVE*ILCSPSWRSLIFFF Trigger: AAAGAAGAAGATAAGAGATCGCCAACTTGGTGAACACAAGATCAACTCCACTTTTAGTGACACCACTTTGCTTCTCAACAAAGACATTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
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| CDS TCA 72 bp | CTCTTCCGAGTCCATGAAACAGTAGCAGATCGGGTTTaGATATTAGAAACCACAGGTTTTTCAATGTTGAAA | + |
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Preference number: 6 (lower is better) Translates to: LFRVHETVADRV*ILETTGFSMLK Trigger: TTTCAACATTGAAAAACCTGTGGTTTCTAATATTCAAACCCGATCTGCTACTGTTTCATGGACTCGGAAGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
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| CDS CCA 72 bp | CCAAAAGAAAGCTGCTTATTTTGGATCCATTATCATTaGAAGCTTTCCATTGTAAACTCAGGCTGTTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: PKESCLFWIHYH*KLSIVNSGCSW Trigger: CCAAGAACAGCCTGAGTTTACAATGGAAAGCTTCCAATGATAATGGATCCAAAATAAGCAGCTTTCTTTTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
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| CDS CAA 72 bp | ATCAGCCTTTATGGTAAGGATTTCTCCAGGGTTAACTaGAACAAATACAATTTGAGACCAGTATTGGGGACA | + |
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Preference number: 6 (lower is better) Translates to: ISLYGKDFSRVN*NKYNLRPVLGT Trigger: TGTCCCCAATACTGGTCTCAAATTGTATTTGTTCAAGTTAACCCTGGAGAAATCCTTACCATAAAGGCTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039447.14 ENSMUST00000138724.8 ENSMUST00000140707.2 ENSMUST00000149331.2 |
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| CDS CAA 72 bp | CTTCAGACACACTTCTGTGTTCTGCATTTCTTATGGTaGTTACTCTTAAAAAGTAGACCATGCAAGGTTGTA | + |
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Preference number: 6 (lower is better) Translates to: LQTHFCVLHFLW*LLLKSRPCKVV Trigger: TACAACCTTGCATGGTCTACTTTTTAAGAGTAACAACCATAAGAAATGCAGAACACAGAAGTGTGTCTGAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
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| CDS CAA 72 bp | TCCAAAAGAAAGCTGCTTATTTTGGATCCATTATCATaGGAAGCTTTCCATTGTAAACTCAGGCTGTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: SKRKLLILDPLS*EAFHCKLRLFL Trigger: CAAGAACAGCCTGAGTTTACAATGGAAAGCTTCCAATGATAATGGATCCAAAATAAGCAGCTTTCTTTTGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
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| CDS CAA 72 bp | GATTTTAAACTTGTATTCTGTATACTCACTCAATTTTaGCACTTTGTGAGTCACATCCGGCCCACGGTAAAT | + |
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Preference number: 6 (lower is better) Translates to: DFKLVFCILTQF*HFVSHIRPTVN Trigger: ATTTACCGTGGGCCGGATGTGACTCACAAAGTGCAAAAATTGAGTGAGTATACAGAATACAAGTTTAAAATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
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| CDS CAA 90 bp | TTCCAGATTGTAGGCAAAAATCCGAAACTTGTACATAGTGTTTCTTaGAAGATTTCTTATGGTGCAGGTGAGGTCTTCTCCATTGTATTT | + |
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Preference number: 6 (lower is better) Translates to: FQIVGKNPKLVHSVS*KISYGAGEVFSIVF Trigger: AAATACAATGGAGAAGACCTCACCTGCACCATAAGAAATCTTCAAAGAAACACTATGTACAAGTTTCGGATTTTTGCCTACAATCTGGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
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| CDS TCA 72 bp | AATATTGTTATTGTTGTCAGAGCAAAAAGTAGCATTTaGGGTAGAAATGCTTGGGGTATGAGCAGAAGAACT | + |
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Preference number: 6 (lower is better) Translates to: NIVIVVRAKSSI*GRNAWGMSRRT Trigger: AGTTCTTCTGCTCATACCCCAAGCATTTCTACCTCAAATGCTACTTTTTGCTCTGACAACAATAACAATATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
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| CDS CAA 72 bp | TTACCCTCATCCCATTCCAAAAGAAAGCTGCTTATTTaGGATCCATTATCATTGGAAGCTTTCCATTGTAAA | + |
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Preference number: 6 (lower is better) Translates to: LPSSHSKRKLLI*DPLSLEAFHCK Trigger: TTTACAATGGAAAGCTTCCAATGATAATGGATCCAAAATAAGCAGCTTTCTTTTGGAATGGGATGAGGGTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
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| CDS CAA 72 bp | AGCATCTGGTGGTTTGTGAGTTTCATCATAGGTGACTaGATTGTAATTACTTATGGAAGAGTCTGTAATATT | + |
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Preference number: 6 (lower is better) Translates to: SIWWFVSFIIGD*IVITYGRVCNI Trigger: AATATTACAGACTCTTCCATAAGTAATTACAATCAAGTCACCTATGATGAAACTCACAAACCACCAGATGCT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039447.14 |
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