Pregenerated sensors for FNDC11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047841Ensembl transcript IDs: ENSMUST00000050026.7, ENSMUST00000108835.2
Found 88 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAAGTAAGAAATCATGGTCCTGGGCATCCTTGTTTCCAAGGCAGCTaGGATGCTAGCACTAAAGCTATGACTGCCCTCAGTGGTGTCCAA | + |
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Preference number: 1 (lower is better) Translates to: KVRNHGPGHPCFQGS*DASTKAMTALSGVQ Trigger: TTGGACACCACTGAGGGCAGTCATAGCTTTAGTGCTAGCATCCCAGCTGCCTTGGAAACAAGGATGCCCAGGACCATGATTTCTTACTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050026.7 |
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| 3UTR-3UTR TCA 90 bp | GTAAGAAATCATGGTCCTGGGCATCCTTGTTTCCAAGGCAGCTGGGATGCTAGCCTGAGGCTGAGGGGCTaGGTTCCCTTGAAGCAGCCA | + |
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Preference number: 2 (lower is better) Translates to: VRNHGPGHPCFQGSWDASLRLRG*VPLKQP Trigger: TGGCTGCTTCAAGGGAACTCAGCCCCTCAGCCTCAG...GCTAGCATCCCAGCTGCCTTGGAAACAAGGATGCCCAGGACCATGATTTCTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050026.7 |
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| CDS-3UTR CCA 90 bp | GGTGCTGAGGCTGAGGGGCTGAGTTCCCTTGAAGCAGCCAGGTACCGGTGGCCAGGCTCCAGCAGCTGCTaGTCCTCTGCCTCCTCCACC | + |
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Preference number: 4 (lower is better) Translates to: GAEAEGLSSLEAARYRWPGSSSC*SSASST Trigger: GGTGGAGGAGGCAGAGGACCAGCAGCTGCTGGAGCC...TGGCCACCGGTACCTGGCTGCTTCAAGGGAACTCAGCCCCTCAGCCTCAGCACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050026.7 |
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| CDS-3UTR CCA 90 bp | GGTGCTGAGGCTGAGGGGCTGAGTTCCCTTGAAGCAGCCAGGTACCGGTGGCCAAGTGCTGCCCGGCCATaGTCCAGCTGCTCCAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: GAEAEGLSSLEAARYRWPSAARP*SSCSSR Trigger: CCTGCTGGAGCAGCTGGACCATGGCCGGGCAGCACT...TGGCCACCGGTACCTGGCTGCTTCAAGGGAACTCAGCCCCTCAGCCTCAGCACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050026.7 |
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| CDS-3UTR TCA 90 bp | GCTGAGGGGCTGAGTTCCCTTGAAGCAGCCAGGTACCGGTGGCCAGCTCTCTCTCAAACCAGCGCAGGCTaGCCCAGTCCTGATGCGCCA | + |
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Preference number: 4 (lower is better) Translates to: AEGLSSLEAARYRWPALSQTSAG*PSPDAP Trigger: TGGCGCATCAGGACTGGGTCAGCCTGCGCTGGTTTG...AGAGAGAGCTGGCCACCGGTACCTGGCTGCTTCAAGGGAACTCAGCCCCTCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050026.7 |
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| CDS-3UTR GCA 90 bp | GGTGCTGAGGCTGAGGGGCTGAGTTCCCTTGAAGCAGCCAGGTACCGGTGGCCACTCCTCCACCTCCTCTaGGTCCAGGAAGGAATGTGG | + |
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Preference number: 4 (lower is better) Translates to: GAEAEGLSSLEAARYRWPLLHLL*VQEGMW Trigger: CCACATTCCTTCCTGGACGCAGAGGAGGTGGAGGAG...TGGCCACCGGTACCTGGCTGCTTCAAGGGAACTCAGCCCCTCAGCCTCAGCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050026.7 |
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| CDS-3UTR CCA 90 bp | GAGGGGCTGAGTTCCCTTGAAGCAGCCAGGTACCGGTGGCCAGCTCTCTCTTGTGTGCTGCCGGCTGGATaGTTACAAACCAGCGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: EGLSSLEAARYRWPALSCVLPAG*LQTSAG Trigger: GCCTGCGCTGGTTTGTAACCATCCAGCCGGCAGCAC...ACAAGAGAGAGCTGGCCACCGGTACCTGGCTGCTTCAAGGGAACTCAGCCCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050026.7 |
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| CDS-3UTR TCA 90 bp | GAGGGGCTGAGTTCCCTTGAAGCAGCCAGGTACCGGTGGCCAGCTCTCTCTTGTAGTAGGAGCACTTCTTaGGCAGCTGCATGCGGGCAT | + |
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Preference number: 4 (lower is better) Translates to: EGLSSLEAARYRWPALSCSRSTS*AAACGH Trigger: ATGCCCGCATGCAGCTGCTCAAGAAGTGCTCCTACT...ACAAGAGAGAGCTGGCCACCGGTACCTGGCTGCTTCAAGGGAACTCAGCCCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050026.7 |
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| CDS-3UTR TCA 90 bp | GAGGGGCTGAGTTCCCTTGAAGCAGCCAGGTACCGGTGGCCAGCTCTCTCTTGTATACCAGGCGGTGCTTaGCATGCAGGTGTCCTGGTA | + |
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Preference number: 4 (lower is better) Translates to: EGLSSLEAARYRWPALSCIPGGA*HAGVLV Trigger: TACCAGGACACCTGCATGTCAAGCACCGCCTGGTAT...ACAAGAGAGAGCTGGCCACCGGTACCTGGCTGCTTCAAGGGAACTCAGCCCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050026.7 |
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| CDS-3UTR GCA 90 bp | CAGAGAGCTCAACCTAGGAGGCAGGGAAAGAAATCTGGTTCTGGCTGTCCGGATCGGCCATGGTCCAGCTaGTCCAGCAGGTCCCCAAGC | + |
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Preference number: 4 (lower is better) Translates to: QRAQPRRQGKKSGSGCPDRPWSS*SSRSPS Trigger: GCTTGGGGACCTGCTGGAGCAGCTGGACCATGGCCG...ATCCGGACAGCCAGAACCAGATTTCTTTCCCTGCCTCCTAGGTTGAGCTCTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050026.7 |
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| CDS-3UTR CCA 90 bp | GGTGCTGAGGCTGAGGGGCTGAGTTCCCTTGAAGCAGCCAGGTACCGGTGGCCACCGGTCGAACATAACTaGCATCTTCGTGCTCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: GAEAEGLSSLEAARYRWPPVEHN*HLRAQH Trigger: ATGCTGAGCACGAAGATGCCAGTTATGTTCGACCGG...TGGCCACCGGTACCTGGCTGCTTCAAGGGAACTCAGCCCCTCAGCCTCAGCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050026.7 |
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| CDS-3UTR CCA 90 bp | CAGAGAGCTCAACCTAGGAGGCAGGGAAAGAAATCTGGTTCTGGCTGTCCGGATTGCATGCGGGCATGGTaGCGCTTGAGCAACTGGGGG | + |
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Preference number: 4 (lower is better) Translates to: QRAQPRRQGKKSGSGCPDCMRAW*RLSNWG Trigger: CCCCCAGTTGCTCAAGCGCCACCATGCCCGCATGCA...ATCCGGACAGCCAGAACCAGATTTCTTTCCCTGCCTCCTAGGTTGAGCTCTCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050026.7 |
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| CDS-3UTR CCA 90 bp | ATCTTCCTCAGAGAGCTCAACCTAGGAGGCAGGGAAAGAAATCTGGTTCTGGCTAGCACCAGCGGGTTCTaGTCACCCAGGGCCAGGTGC | + |
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Preference number: 4 (lower is better) Translates to: IFLRELNLGGRERNLVLASTSGF*SPRARC Trigger: GCACCTGGCCCTGGGTGACCAGAACCCGCTGGTGCT...AGCCAGAACCAGATTTCTTTCCCTGCCTCCTAGGTTGAGCTCTCTGAGGAAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050026.7 |
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| CDS-3UTR TCA 90 bp | CCAAAGTATCATCTTCCTCAGAGAGCTCAACCTAGGAGGCAGGGAAAGAAATCTGCGTGGTCTGCAAGGTaGGGCTGTCCCGCCAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: PKYHLPQRAQPRRQGKKSAWSAR*GCPARA Trigger: AGCCCTGGCGGGACAGCCTCACCTTGCAGACCACGC...AGATTTCTTTCCCTGCCTCCTAGGTTGAGCTCTCTGAGGAAGATGATACTTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050026.7 |
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| CDS-3UTR GCA 90 bp | CCAAAGTATCATCTTCCTCAGAGAGCTCAACCTAGGAGGCAGGGAAAGAAATCTCACAAGCCCCCAGCCTaGCAGGAAGGGCCGTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: PKYHLPQRAQPRRQGKKSHKPPA*QEGPWV Trigger: GACCCACGGCCCTTCCTGGCAGGCTGGGGGCTTGTG...AGATTTCTTTCCCTGCCTCCTAGGTTGAGCTCTCTGAGGAAGATGATACTTTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050026.7 |
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| CDS-3UTR GCA 90 bp | CAACCTAGGAGGCAGGGAAAGAAATCTGGTTCTGGCTGTCCGGATGAGGGGTACAGGCGGTGCTTGACATaGAGGTGTCCTGGTACCATC | + |
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Preference number: 4 (lower is better) Translates to: QPRRQGKKSGSGCPDEGYRRCLT*RCPGTI Trigger: GATGGTACCAGGACACCTGCATGTCAAGCACCGCCT...GTACCCCTCATCCGGACAGCCAGAACCAGATTTCTTTCCCTGCCTCCTAGGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050026.7 |
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| CDS-3UTR GCA 90 bp | ATCATCTTCCTCAGAGAGCTCAACCTAGGAGGCAGGGAAAGAAATCTGGTTCTGGGTCCTGGCGTGGTCTaGAAGGTGAGGCTGTCCCGC | + |
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Preference number: 4 (lower is better) Translates to: IIFLRELNLGGRERNLVLGPGVV*KVRLSR Trigger: GCGGGACAGCCTCACCTTGCAGACCACGCCAGGACC...CAGAACCAGATTTCTTTCCCTGCCTCCTAGGTTGAGCTCTCTGAGGAAGATGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050026.7 |
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| CDS-3UTR GCA 90 bp | ATCATCTTCCTCAGAGAGCTCAACCTAGGAGGCAGGGAAAGAAATCTGGTTCTGCAGCTGCTGGTCCTCTaGCTCCTCCACCTCCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: IIFLRELNLGGRERNLVLQLLVL*LLHLLC Trigger: GCAGAGGAGGTGGAGGAGGCAGAGGACCAGCAGCTG...CAGAACCAGATTTCTTTCCCTGCCTCCTAGGTTGAGCTCTCTGAGGAAGATGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050026.7 |
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| CDS-3UTR GCA 90 bp | CAACCTAGGAGGCAGGGAAAGAAATCTGGTTCTGGCTGTCCGGATGAGGGGTACCAGCCACAGGGACTATaGCACACTGTGTACACTCCT | + |
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Preference number: 4 (lower is better) Translates to: QPRRQGKKSGSGCPDEGYQPQGL*HTVYTP Trigger: AGGAGTGTACACAGTGTGGCATAGTCCCTGTGGCTG...GTACCCCTCATCCGGACAGCCAGAACCAGATTTCTTTCCCTGCCTCCTAGGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050026.7 |
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| CDS-3UTR CCA 90 bp | ATGACTGCCCTCAGTGGTGTCCAAACAGGCCCAAAGTATCATCTTCCTCAGAGATGTCCTCCAAGCCTCTaGCTCCAGCAGCTGCTGGTC | + |
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Preference number: 4 (lower is better) Translates to: MTALSGVQTGPKYHLPQRCPPSL*LQQLLV Trigger: GACCAGCAGCTGCTGGAGCCAGAGGCTTGGAGGACA...TCTCTGAGGAAGATGATACTTTGGGCCTGTTTGGACACCACTGAGGGCAGTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050026.7 |
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| CDS-3UTR CCA 90 bp | GTAAGAAATCATGGTCCTGGGCATCCTTGTTTCCAAGGCAGCTGGGATGCTAGCGGAGGAGCTGGATCTTaGTCTGTGCTGTGCCCACCT | + |
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Preference number: 4 (lower is better) Translates to: VRNHGPGHPCFQGSWDASGGAGS*SVLCPP Trigger: AGGTGGGCACAGCACAGACCAAGATCCAGCTCCTCC...GCTAGCATCCCAGCTGCCTTGGAAACAAGGATGCCCAGGACCATGATTTCTTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050026.7 |
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| CDS-3UTR GCA 90 bp | CAGAGAGCTCAACCTAGGAGGCAGGGAAAGAAATCTGGTTCTGGCTGTCCGGATTCTTGGTCTGTGCTGTaGCCACCTTCTTCATGCGCT | + |
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Preference number: 4 (lower is better) Translates to: QRAQPRRQGKKSGSGCPDSWSVL*PPSSCA Trigger: AGCGCATGAAGAAGGTGGGCACAGCACAGACCAAGA...ATCCGGACAGCCAGAACCAGATTTCTTTCCCTGCCTCCTAGGTTGAGCTCTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050026.7 |
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| CDS-3UTR CCA 90 bp | ATCATCTTCCTCAGAGAGCTCAACCTAGGAGGCAGGGAAAGAAATCTGGTTCTGGGGGGCTCAGGTCTGTaGTCAGGAACTCACGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: IIFLRELNLGGRERNLVLGGSGL*SGTHAA Trigger: TGCTGCGTGAGTTCCTGACCACAGACCTGAGCCCCC...CAGAACCAGATTTCTTTCCCTGCCTCCTAGGTTGAGCTCTCTGAGGAAGATGAT 53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000050026.7 |
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| CDS-3UTR CCA 90 bp | CCAAAGTATCATCTTCCTCAGAGAGCTCAACCTAGGAGGCAGGGAAAGAAATCTAGCTGCATGCGGGCATaGTGGCGCTTGAGCAACTGG | + |
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Preference number: 4 (lower is better) Translates to: PKYHLPQRAQPRRQGKKSSCMRA*WRLSNW Trigger: CCAGTTGCTCAAGCGCCACCATGCCCGCATGCAGCT...AGATTTCTTTCCCTGCCTCCTAGGTTGAGCTCTCTGAGGAAGATGATACTTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050026.7 |
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| CDS-3UTR CCA 90 bp | AAACAGGCCCAAAGTATCATCTTCCTCAGAGAGCTCAACCTAGGAGGCAGGGAACCAAGCAGGAGGAGCTaGATCTTGGTCTGTGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: KQAQSIIFLRELNLGGREPSRRS*ILVCAV Trigger: CACAGCACAGACCAAGATCCAGCTCCTCCTGCTTGG...TTCCCTGCCTCCTAGGTTGAGCTCTCTGAGGAAGATGATACTTTGGGCCTGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050026.7 |
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| CDS-3UTR GCA 90 bp | ATGACTGCCCTCAGTGGTGTCCAAACAGGCCCAAAGTATCATCTTCCTCAGAGATGTGGACATCAAAGGTaGAGGCAGCCACAGGGACTA | + |
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Preference number: 4 (lower is better) Translates to: MTALSGVQTGPKYHLPQRCGHQR*RQPQGL Trigger: TAGTCCCTGTGGCTGCCTGCACCTTTGATGTCCACA...TCTCTGAGGAAGATGATACTTTGGGCCTGTTTGGACACCACTGAGGGCAGTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050026.7 |
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| CDS-3UTR CCA 90 bp | CAACCTAGGAGGCAGGGAAAGAAATCTGGTTCTGGCTGTCCGGATGAGGGGTACGTCCAGGAAGGAATGTaGACTGTCCAGCTTCATTTT | + |
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Preference number: 4 (lower is better) Translates to: QPRRQGKKSGSGCPDEGYVQEGM*TVQLHF Trigger: AAAATGAAGCTGGACAGTCCACATTCCTTCCTGGAC...GTACCCCTCATCCGGACAGCCAGAACCAGATTTCTTTCCCTGCCTCCTAGGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050026.7 |
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| CDS-3UTR GCA 90 bp | ATGACTGCCCTCAGTGGTGTCCAAACAGGCCCAAAGTATCATCTTCCTCAGAGACTGGATCTTGGTCTGTaGTGTGCCCACCTTCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: MTALSGVQTGPKYHLPQRLDLGL*CAHLLH Trigger: ATGAAGAAGGTGGGCACAGCACAGACCAAGATCCAG...TCTCTGAGGAAGATGATACTTTGGGCCTGTTTGGACACCACTGAGGGCAGTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050026.7 |
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| CDS-3UTR CCA 90 bp | GCCCAAAGTATCATCTTCCTCAGAGAGCTCAACCTAGGAGGCAGGGAAAGAAATGACATGCAGGTGTCCTaGTACCATCATGGCCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: AQSIIFLRELNLGGRERNDMQVS*YHHGQE Trigger: TTCCTGGCCATGATGGTACCAGGACACCTGCATGTC...ATTTCTTTCCCTGCCTCCTAGGTTGAGCTCTCTGAGGAAGATGATACTTTGGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050026.7 |
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| CDS-3UTR TCA 90 bp | TATTTTAAAAGTAAGAAATCATGGTCCTGGGCATCCTTGTTTCCAAGGCAGCTGAGGCTGACCCAGTCCTaGTGCGCCACTGACTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: YFKSKKSWSWASLFPRQLRLTQS*CATDSF Trigger: GAAGGAGTCAGTGGCGCATCAGGACTGGGTCAGCCT...CAGCTGCCTTGGAAACAAGGATGCCCAGGACCATGATTTCTTACTTTTAAAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050026.7 |
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| CDS-3UTR GCA 90 bp | ATTTTAAAAGTAAGAAATCATGGTCCTGGGCATCCTTGTTTCCAAGGCAGCTGGTCACCCAGGGCCAGGTaGTTAGGGAGAATCTCAATG | + |
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Preference number: 4 (lower is better) Translates to: ILKVRNHGPGHPCFQGSWSPRAR*LGRISM Trigger: CATTGAGATTCTCCCTAAGCACCTGGCCCTGGGTGA...CCAGCTGCCTTGGAAACAAGGATGCCCAGGACCATGATTTCTTACTTTTAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050026.7 |
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| CDS-3UTR GCA 90 bp | CCAAAGTATCATCTTCCTCAGAGAGCTCAACCTAGGAGGCAGGGAAAGAAATCTCAGGGTGTAGCTTTCTaGCCTCTTGATAGTGAACTT | + |
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Preference number: 4 (lower is better) Translates to: PKYHLPQRAQPRRQGKKSQGVAF*PLDSEL Trigger: AAGTTCACTATCAAGAGGGCAGAAAGCTACACCCTG...AGATTTCTTTCCCTGCCTCCTAGGTTGAGCTCTCTGAGGAAGATGATACTTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050026.7 |
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| CDS-3UTR CCA 90 bp | ATTTTAAAAGTAAGAAATCATGGTCCTGGGCATCCTTGTTTCCAAGGCAGCTGGTTGGGCAACAGGTTGTaGACATCAAAGGTGCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: ILKVRNHGPGHPCFQGSWLGNRL*TSKVQA Trigger: TGCCTGCACCTTTGATGTCCACAACCTGTTGCCCAA...CCAGCTGCCTTGGAAACAAGGATGCCCAGGACCATGATTTCTTACTTTTAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050026.7 |
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| CDS-3UTR CCA 90 bp | ATTTTAAAAGTAAGAAATCATGGTCCTGGGCATCCTTGTTTCCAAGGCAGCTGGACCTTCTTCATGCGCTaGAACTTCCAGGGATCAATG | + |
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Preference number: 4 (lower is better) Translates to: ILKVRNHGPGHPCFQGSWTFFMR*NFQGSM Trigger: CATTGATCCCTGGAAGTTCCAGCGCATGAAGAAGGT...CCAGCTGCCTTGGAAACAAGGATGCCCAGGACCATGATTTCTTACTTTTAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050026.7 |
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| CDS CCA 90 bp | CGTGGGTCAGGGGCCTCAAGTAGGGCATCCAGTGCTGCCCGGCCATaGTCCAGCTGCTCCAGCAGGTCCCCAAGCAGGAGGAGCTGGATC | + |
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Preference number: 5 (lower is better) Translates to: RGSGASSRASSAARP*SSCSSRSPSRRSWI Trigger: GATCCAGCTCCTCCTGCTTGGGGACCTGCTGGAGCAGCTGGACCATGGCCGGGCAGCACTGGATGCCCTACTTGAGGCCCCTGACCCACG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050026.7 ENSMUST00000108835.2 |
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| CDS GCA 90 bp | GCAACTGGGGGCTCAGGTCTGTGGTCAGGAACTCACGCAGCACGTTaGGGCGCTCCATGTATGTCCTCCAAGCCTCTGGCTCCAGCAGCT | + |
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Preference number: 5 (lower is better) Translates to: ATGGSGLWSGTHAAR*GAPCMSSKPLAPAA Trigger: AGCTGCTGGAGCCAGAGGCTTGGAGGACATACATGGAGCGCCGCAACGTGCTGCGTGAGTTCCTGACCACAGACCTGAGCCCCCAGTTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050026.7 ENSMUST00000108835.2 |
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| CDS CCA 90 bp | CACTTCTTGAGCAGCTGCATGCGGGCATGGTGGCGCTTGAGCAACTaGGGGCTCAGGTCTGTGGTCAGGAACTCACGCAGCACGTTGCGG | + |
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Preference number: 5 (lower is better) Translates to: HFLSSCMRAWWRLSN*GLRSVVRNSRSTLR Trigger: CCGCAACGTGCTGCGTGAGTTCCTGACCACAGACCTGAGCCCCCAGTTGCTCAAGCGCCACCATGCCCGCATGCAGCTGCTCAAGAAGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050026.7 ENSMUST00000108835.2 |
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| CDS CCA 90 bp | CGGCCATGGTCCAGCTGCTCCAGCAGGTCCCCAAGCAGGAGGAGCTaGATCTTGGTCTGTGCTGTGCCCACCTTCTTCATGCGCTGGAAC | + |
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Preference number: 5 (lower is better) Translates to: RPWSSCSSRSPSRRS*ILVCAVPTFFMRWN Trigger: GTTCCAGCGCATGAAGAAGGTGGGCACAGCACAGACCAAGATCCAGCTCCTCCTGCTTGGGGACCTGCTGGAGCAGCTGGACCATGGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050026.7 ENSMUST00000108835.2 |
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| CDS CCA 90 bp | GGTCCAGCTGCTCCAGCAGGTCCCCAAGCAGGAGGAGCTGGATCTTaGTCTGTGCTGTGCCCACCTTCTTCATGCGCTGGAACTTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: GPAAPAGPQAGGAGS*SVLCPPSSCAGTSR Trigger: CCTGGAAGTTCCAGCGCATGAAGAAGGTGGGCACAGCACAGACCAAGATCCAGCTCCTCCTGCTTGGGGACCTGCTGGAGCAGCTGGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050026.7 ENSMUST00000108835.2 |
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| CDS GCA 90 bp | CCTGGGCTCCAACAGCTTGAAGCGCAGTTCATACTGCTCTGGTGCTaGCGGCTGGATGGTTACAAACCAGCGCAGGCTGACCCAGTCCTG | + |
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Preference number: 5 (lower is better) Translates to: PGLQQLEAQFILLWC*RLDGYKPAQADPVL Trigger: CAGGACTGGGTCAGCCTGCGCTGGTTTGTAACCATCCAGCCGGCAGCACCAGAGCAGTATGAACTGCGCTTCAAGCTGTTGGAGCCCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050026.7 ENSMUST00000108835.2 |
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| CDS CCA 90 bp | CTGGTCCTCTGCCTCCTCCACCTCCTCTGCGTCCAGGAAGGAATGTaGACTGTCCAGCTTCATTTTGTCCAGGGCCAGGCCTGTCACCTG | + |
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Preference number: 5 (lower is better) Translates to: LVLCLLHLLCVQEGM*TVQLHFVQGQACHL Trigger: CAGGTGACAGGCCTGGCCCTGGACAAAATGAAGCTGGACAGTCCACATTCCTTCCTGGACGCAGAGGAGGTGGAGGAGGCAGAGGACCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050026.7 ENSMUST00000108835.2 |
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| CDS-3UTR CAA 90 bp | GAGGGGCTGAGTTCCCTTGAAGCAGCCAGGTACCGGTGGCCAGCTCTCTCTTGTCTGTCCAGCTTCATTTaGTCCAGGGCCAGGCCTGTC | + |
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Preference number: 5 (lower is better) Translates to: EGLSSLEAARYRWPALSCLSSFI*SRARPV Trigger: GACAGGCCTGGCCCTGGACAAAATGAAGCTGGACAG...ACAAGAGAGAGCTGGCCACCGGTACCTGGCTGCTTCAAGGGAACTCAGCCCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050026.7 |
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| CDS TCA 90 bp | GCTGCCGGCTGGATGGTTACAAACCAGCGCAGGCTGACCCAGTCCTaGTGCGCCACTGACTCCTTCCGGTCGAACATAACTGGCATCTTC | + |
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Preference number: 5 (lower is better) Translates to: AAGWMVTNQRRLTQS*CATDSFRSNITGIF Trigger: GAAGATGCCAGTTATGTTCGACCGGAAGGAGTCAGTGGCGCATCAGGACTGGGTCAGCCTGCGCTGGTTTGTAACCATCCAGCCGGCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050026.7 ENSMUST00000108835.2 |
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| CDS GCA 90 bp | TGTCCTGGGCTCCAACAGCTTGAAGCGCAGTTCATACTGCTCTGGTaGTGCCGGCTGGATGGTTACAAACCAGCGCAGGCTGACCCAGTC | + |
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Preference number: 5 (lower is better) Translates to: CPGLQQLEAQFILLW*CRLDGYKPAQADPV Trigger: GACTGGGTCAGCCTGCGCTGGTTTGTAACCATCCAGCCGGCAGCACCAGAGCAGTATGAACTGCGCTTCAAGCTGTTGGAGCCCAGGACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050026.7 ENSMUST00000108835.2 |
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| CDS GCA 90 bp | TCCTGTTGTGTCCTGGGCTCCAACAGCTTGAAGCGCAGTTCATACTaGTCTGGTGCTGCCGGCTGGATGGTTACAAACCAGCGCAGGCTG | + |
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Preference number: 5 (lower is better) Translates to: SCCVLGSNSLKRSSY*SGAAGWMVTNQRRL Trigger: CAGCCTGCGCTGGTTTGTAACCATCCAGCCGGCAGCACCAGAGCAGTATGAACTGCGCTTCAAGCTGTTGGAGCCCAGGACACAACAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050026.7 ENSMUST00000108835.2 |
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| CDS CCA 90 bp | TTGTGTCCTGGGCTCCAACAGCTTGAAGCGCAGTTCATACTGCTCTaGTGCTGCCGGCTGGATGGTTACAAACCAGCGCAGGCTGACCCA | + |
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Preference number: 5 (lower is better) Translates to: LCPGLQQLEAQFILL*CCRLDGYKPAQADP Trigger: TGGGTCAGCCTGCGCTGGTTTGTAACCATCCAGCCGGCAGCACCAGAGCAGTATGAACTGCGCTTCAAGCTGTTGGAGCCCAGGACACAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050026.7 ENSMUST00000108835.2 |
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| CDS CCA 90 bp | GTGCCCACCTTCTTCATGCGCTGGAACTTCCAGGGATCAATGAGCTaGAACATGGTGTTAGGTAGCACCAGCGGGTTCTGGTCACCCAGG | + |
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Preference number: 5 (lower is better) Translates to: VPTFFMRWNFQGSMS*NMVLGSTSGFWSPR Trigger: CCTGGGTGACCAGAACCCGCTGGTGCTACCTAACACCATGTTCCAGCTCATTGATCCCTGGAAGTTCCAGCGCATGAAGAAGGTGGGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050026.7 ENSMUST00000108835.2 |
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| CDS TCA 90 bp | GATGGTTACAAACCAGCGCAGGCTGACCCAGTCCTGATGCGCCACTaGCTCCTTCCGGTCGAACATAACTGGCATCTTCGTGCTCAGCAT | + |
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Preference number: 5 (lower is better) Translates to: DGYKPAQADPVLMRH*LLPVEHNWHLRAQH Trigger: ATGCTGAGCACGAAGATGCCAGTTATGTTCGACCGGAAGGAGTCAGTGGCGCATCAGGACTGGGTCAGCCTGCGCTGGTTTGTAACCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050026.7 ENSMUST00000108835.2 |
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| CDS TCA 90 bp | TGCCACACTGTGTACACTCCTGTTGTGTCCTGGGCTCCAACAGCTTaGAGCGCAGTTCATACTGCTCTGGTGCTGCCGGCTGGATGGTTA | + |
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Preference number: 5 (lower is better) Translates to: CHTVYTPVVSWAPTA*SAVHTALVLPAGWL Trigger: TAACCATCCAGCCGGCAGCACCAGAGCAGTATGAACTGCGCTTCAAGCTGTTGGAGCCCAGGACACAACAGGAGTGTACACAGTGTGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050026.7 ENSMUST00000108835.2 |
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| CDS GCA 90 bp | GCAACAGGTTGTGGACATCAAAGGTGCAGGCAGCCACAGGGACTATaGCACACTGTGTACACTCCTGTTGTGTCCTGGGCTCCAACAGCT | + |
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Preference number: 5 (lower is better) Translates to: ATGCGHQRCRQPQGL*HTVYTPVVSWAPTA Trigger: AGCTGTTGGAGCCCAGGACACAACAGGAGTGTACACAGTGTGGCATAGTCCCTGTGGCTGCCTGCACCTTTGATGTCCACAACCTGTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050026.7 ENSMUST00000108835.2 |
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| CDS GCA 90 bp | GGTGAGGCTGTCCCGCCAGGGCTCATAGACCAGGGTGTAGCTTTCTaGCCTCTTGATAGTGAACTTGTAGGTACGGTTGGGCAACAGGTT | + |
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Preference number: 5 (lower is better) Translates to: GEAVPPGLIDQGVAF*PLDSELVGTVGQQV Trigger: AACCTGTTGCCCAACCGTACCTACAAGTTCACTATCAAGAGGGCAGAAAGCTACACCCTGGTCTATGAGCCCTGGCGGGACAGCCTCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050026.7 ENSMUST00000108835.2 |
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| CDS-3UTR CAA 90 bp | CCAAAGTATCATCTTCCTCAGAGAGCTCAACCTAGGAGGCAGGGAAAGAAATCTCGGGCATGGTGGCGCTaGAGCAACTGGGGGCTCAGG | + |
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Preference number: 5 (lower is better) Translates to: PKYHLPQRAQPRRQGKKSRAWWR*SNWGLR Trigger: CCTGAGCCCCCAGTTGCTCAAGCGCCACCATGCCCG...AGATTTCTTTCCCTGCCTCCTAGGTTGAGCTCTCTGAGGAAGATGATACTTTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050026.7 |
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| CDS TCA 90 bp | TGTGTGGGATTTTGGTGGCTCCAATGTCAGATACCAGGCGGTGCTTaGCATGCAGGTGTCCTGGTACCATCATGGCCAGGAAGTTGTCCA | + |
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Preference number: 5 (lower is better) Translates to: CVGFWWLQCQIPGGA*HAGVLVPSWPGSCP Trigger: TGGACAACTTCCTGGCCATGATGGTACCAGGACACCTGCATGTCAAGCACCGCCTGGTATCTGACATTGGAGCCACCAAAATCCCACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050026.7 ENSMUST00000108835.2 |
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| CDS GCA 90 bp | GGGATTTTGGTGGCTCCAATGTCAGATACCAGGCGGTGCTTGACATaGAGGTGTCCTGGTACCATCATGGCCAGGAAGTTGTCCATGACA | + |
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Preference number: 5 (lower is better) Translates to: GILVAPMSDTRRCLT*RCPGTIMARKLSMT Trigger: TGTCATGGACAACTTCCTGGCCATGATGGTACCAGGACACCTGCATGTCAAGCACCGCCTGGTATCTGACATTGGAGCCACCAAAATCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050026.7 ENSMUST00000108835.2 |
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| CDS CCA 90 bp | AGGAGCTGGATCTTGGTCTGTGCTGTGCCCACCTTCTTCATGCGCTaGAACTTCCAGGGATCAATGAGCTGGAACATGGTGTTAGGTAGC | + |
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Preference number: 5 (lower is better) Translates to: RSWILVCAVPTFFMR*NFQGSMSWNMVLGS Trigger: GCTACCTAACACCATGTTCCAGCTCATTGATCCCTGGAAGTTCCAGCGCATGAAGAAGGTGGGCACAGCACAGACCAAGATCCAGCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050026.7 ENSMUST00000108835.2 |
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| CDS-3UTR CAA 90 bp | GTAAGAAATCATGGTCCTGGGCATCCTTGTTTCCAAGGCAGCTGGGATGCTAGCCTGTGTACACTCCTGTaGTGTCCTGGGCTCCAACAG | + |
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Preference number: 5 (lower is better) Translates to: VRNHGPGHPCFQGSWDASLCTLL*CPGLQQ Trigger: CTGTTGGAGCCCAGGACACAACAGGAGTGTACACAG...GCTAGCATCCCAGCTGCCTTGGAAACAAGGATGCCCAGGACCATGATTTCTTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050026.7 |
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| CDS CCA 90 bp | GTCGAACATAACTGGCATCTTCGTGCTCAGCATAAGCCGGATGTGTaGGATTTTGGTGGCTCCAATGTCAGATACCAGGCGGTGCTTGAC | + |
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Preference number: 5 (lower is better) Translates to: VEHNWHLRAQHKPDV*DFGGSNVRYQAVLD Trigger: GTCAAGCACCGCCTGGTATCTGACATTGGAGCCACCAAAATCCCACACATCCGGCTTATGCTGAGCACGAAGATGCCAGTTATGTTCGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050026.7 ENSMUST00000108835.2 |
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| CDS-3UTR CAA 90 bp | GCCCAAAGTATCATCTTCCTCAGAGAGCTCAACCTAGGAGGCAGGGAAAGAAATCTGGGCTCCAACAGCTaGAAGCGCAGTTCATACTGC | + |
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Preference number: 5 (lower is better) Translates to: AQSIIFLRELNLGGRERNLGSNS*KRSSYC Trigger: GCAGTATGAACTGCGCTTCAAGCTGTTGGAGCCCAG...ATTTCTTTCCCTGCCTCCTAGGTTGAGCTCTCTGAGGAAGATGATACTTTGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050026.7 |
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| CDS TCA 72 bp | CAGGCCCCTCAGGGGGTCCTGGCGTGGTCTGCAAGGTaGGGCTGTCCCGCCAGGGCTCATAGACCAGGGTGT | + |
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Preference number: 6 (lower is better) Translates to: QAPQGVLAWSAR*GCPARAHRPGC Trigger: ACACCCTGGTCTATGAGCCCTGGCGGGACAGCCTCACCTTGCAGACCACGCCAGGACCCCCTGAGGGGCCTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050026.7 ENSMUST00000108835.2 |
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| CDS CCA 72 bp | GGGGCCTCAAGTAGGGCATCCAGTGCTGCCCGGCCATaGTCCAGCTGCTCCAGCAGGTCCCCAAGCAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: GASSRASSAARP*SSCSSRSPSRR Trigger: CCTCCTGCTTGGGGACCTGCTGGAGCAGCTGGACCATGGCCGGGCAGCACTGGATGCCCTACTTGAGGCCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050026.7 ENSMUST00000108835.2 |
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| CDS CAA 90 bp | AGCAACTGGGGGCTCAGGTCTGTGGTCAGGAACTCACGCAGCACGTaGCGGCGCTCCATGTATGTCCTCCAAGCCTCTGGCTCCAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: SNWGLRSVVRNSRST*RRSMYVLQASGSSS Trigger: GCTGCTGGAGCCAGAGGCTTGGAGGACATACATGGAGCGCCGCAACGTGCTGCGTGAGTTCCTGACCACAGACCTGAGCCCCCAGTTGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050026.7 ENSMUST00000108835.2 |
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| CDS CAA 72 bp | GGGCTCAGGTCTGTGGTCAGGAACTCACGCAGCACGTaGCGGCGCTCCATGTATGTCCTCCAAGCCTCTGGC | + |
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Preference number: 6 (lower is better) Translates to: GLRSVVRNSRST*RRSMYVLQASG Trigger: GCCAGAGGCTTGGAGGACATACATGGAGCGCCGCAACGTGCTGCGTGAGTTCCTGACCACAGACCTGAGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050026.7 ENSMUST00000108835.2 |
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| CDS GCA 72 bp | GGCTCAGGTCTGTGGTCAGGAACTCACGCAGCACGTTaGGGCGCTCCATGTATGTCCTCCAAGCCTCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: GSGLWSGTHAAR*GAPCMSSKPLA Trigger: AGCCAGAGGCTTGGAGGACATACATGGAGCGCCGCAACGTGCTGCGTGAGTTCCTGACCACAGACCTGAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050026.7 ENSMUST00000108835.2 |
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| CDS CCA 72 bp | TGCCTCCTCCACCTCCTCTGCGTCCAGGAAGGAATGTaGACTGTCCAGCTTCATTTTGTCCAGGGCCAGGCC | + |
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Preference number: 6 (lower is better) Translates to: CLLHLLCVQEGM*TVQLHFVQGQA Trigger: GGCCTGGCCCTGGACAAAATGAAGCTGGACAGTCCACATTCCTTCCTGGACGCAGAGGAGGTGGAGGAGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050026.7 ENSMUST00000108835.2 |
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| CDS CCA 72 bp | TCCAGCTGCTCCAGCAGGTCCCCAAGCAGGAGGAGCTaGATCTTGGTCTGTGCTGTGCCCACCTTCTTCATG | + |
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Preference number: 6 (lower is better) Translates to: SSCSSRSPSRRS*ILVCAVPTFFM Trigger: CATGAAGAAGGTGGGCACAGCACAGACCAAGATCCAGCTCCTCCTGCTTGGGGACCTGCTGGAGCAGCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050026.7 ENSMUST00000108835.2 |
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| CDS GCA 72 bp | CCCCAAGCAGGAGGAGCTGGATCTTGGTCTGTGCTGTaGCCACCTTCTTCATGCGCTGGAACTTCCAGGGAT | + |
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Preference number: 6 (lower is better) Translates to: PQAGGAGSWSVL*PPSSCAGTSRD Trigger: ATCCCTGGAAGTTCCAGCGCATGAAGAAGGTGGGCACAGCACAGACCAAGATCCAGCTCCTCCTGCTTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050026.7 ENSMUST00000108835.2 |
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| CDS CCA 72 bp | TTGAAGCGCAGTTCATACTGCTCTGGTGCTGCCGGCTaGATGGTTACAAACCAGCGCAGGCTGACCCAGTCC | + |
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Preference number: 6 (lower is better) Translates to: LKRSSYCSGAAG*MVTNQRRLTQS Trigger: GGACTGGGTCAGCCTGCGCTGGTTTGTAACCATCCAGCCGGCAGCACCAGAGCAGTATGAACTGCGCTTCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050026.7 ENSMUST00000108835.2 |
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| CDS CCA 72 bp | GGGCTCCAACAGCTTGAAGCGCAGTTCATACTGCTCTaGTGCTGCCGGCTGGATGGTTACAAACCAGCGCAG | + |
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Preference number: 6 (lower is better) Translates to: GLQQLEAQFILL*CCRLDGYKPAQ Trigger: CTGCGCTGGTTTGTAACCATCCAGCCGGCAGCACCAGAGCAGTATGAACTGCGCTTCAAGCTGTTGGAGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050026.7 ENSMUST00000108835.2 |
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| CDS CAA 90 bp | GGTGCAGGCAGCCACAGGGACTATGCCACACTGTGTACACTCCTGTaGTGTCCTGGGCTCCAACAGCTTGAAGCGCAGTTCATACTGCTC | + |
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Preference number: 6 (lower is better) Translates to: GAGSHRDYATLCTLL*CPGLQQLEAQFILL Trigger: GAGCAGTATGAACTGCGCTTCAAGCTGTTGGAGCCCAGGACACAACAGGAGTGTACACAGTGTGGCATAGTCCCTGTGGCTGCCTGCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050026.7 ENSMUST00000108835.2 |
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| CDS TCA 72 bp | AAACCAGCGCAGGCTGACCCAGTCCTGATGCGCCACTaGCTCCTTCCGGTCGAACATAACTGGCATCTTCGT | + |
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Preference number: 6 (lower is better) Translates to: KPAQADPVLMRH*LLPVEHNWHLR Trigger: ACGAAGATGCCAGTTATGTTCGACCGGAAGGAGTCAGTGGCGCATCAGGACTGGGTCAGCCTGCGCTGGTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050026.7 ENSMUST00000108835.2 |
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| CDS TCA 72 bp | GTGTACACTCCTGTTGTGTCCTGGGCTCCAACAGCTTaGAGCGCAGTTCATACTGCTCTGGTGCTGCCGGCT | + |
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Preference number: 6 (lower is better) Translates to: VYTPVVSWAPTA*SAVHTALVLPA Trigger: AGCCGGCAGCACCAGAGCAGTATGAACTGCGCTTCAAGCTGTTGGAGCCCAGGACACAACAGGAGTGTACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050026.7 ENSMUST00000108835.2 |
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| CDS GCA 72 bp | CAACAGCTTGAAGCGCAGTTCATACTGCTCTGGTGCTaGCGGCTGGATGGTTACAAACCAGCGCAGGCTGAC | + |
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Preference number: 6 (lower is better) Translates to: QQLEAQFILLWC*RLDGYKPAQAD Trigger: GTCAGCCTGCGCTGGTTTGTAACCATCCAGCCGGCAGCACCAGAGCAGTATGAACTGCGCTTCAAGCTGTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050026.7 ENSMUST00000108835.2 |
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| CDS GCA 72 bp | CTCCAACAGCTTGAAGCGCAGTTCATACTGCTCTGGTaGTGCCGGCTGGATGGTTACAAACCAGCGCAGGCT | + |
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Preference number: 6 (lower is better) Translates to: LQQLEAQFILLW*CRLDGYKPAQA Trigger: AGCCTGCGCTGGTTTGTAACCATCCAGCCGGCAGCACCAGAGCAGTATGAACTGCGCTTCAAGCTGTTGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050026.7 ENSMUST00000108835.2 |
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| CDS GCA 72 bp | GTCCTGGGCTCCAACAGCTTGAAGCGCAGTTCATACTaGTCTGGTGCTGCCGGCTGGATGGTTACAAACCAG | + |
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Preference number: 6 (lower is better) Translates to: VLGSNSLKRSSY*SGAAGWMVTNQ Trigger: CTGGTTTGTAACCATCCAGCCGGCAGCACCAGAGCAGTATGAACTGCGCTTCAAGCTGTTGGAGCCCAGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050026.7 ENSMUST00000108835.2 |
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| CDS CCA 72 bp | AGCTGGAACATGGTGTTAGGTAGCACCAGCGGGTTCTaGTCACCCAGGGCCAGGTGCTTAGGGAGAATCTCA | + |
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Preference number: 6 (lower is better) Translates to: SWNMVLGSTSGF*SPRARCLGRIS Trigger: TGAGATTCTCCCTAAGCACCTGGCCCTGGGTGACCAGAACCCGCTGGTGCTACCTAACACCATGTTCCAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050026.7 ENSMUST00000108835.2 |
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| CDS CAA 72 bp | TGTGTACACTCCTGTTGTGTCCTGGGCTCCAACAGCTaGAAGCGCAGTTCATACTGCTCTGGTGCTGCCGGC | + |
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Preference number: 6 (lower is better) Translates to: CVHSCCVLGSNS*KRSSYCSGAAG Trigger: GCCGGCAGCACCAGAGCAGTATGAACTGCGCTTCAAGCTGTTGGAGCCCAGGACACAACAGGAGTGTACACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050026.7 ENSMUST00000108835.2 |
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| CDS CAA 90 bp | ATGCCACACTGTGTACACTCCTGTTGTGTCCTGGGCTCCAACAGCTaGAAGCGCAGTTCATACTGCTCTGGTGCTGCCGGCTGGATGGTT | + |
|
Preference number: 6 (lower is better) Translates to: MPHCVHSCCVLGSNS*KRSSYCSGAAGWMV Trigger: AACCATCCAGCCGGCAGCACCAGAGCAGTATGAACTGCGCTTCAAGCTGTTGGAGCCCAGGACACAACAGGAGTGTACACAGTGTGGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050026.7 ENSMUST00000108835.2 |
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| CDS TCA 72 bp | TGGATGGTTACAAACCAGCGCAGGCTGACCCAGTCCTaGTGCGCCACTGACTCCTTCCGGTCGAACATAACT | + |
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Preference number: 6 (lower is better) Translates to: WMVTNQRRLTQS*CATDSFRSNIT Trigger: AGTTATGTTCGACCGGAAGGAGTCAGTGGCGCATCAGGACTGGGTCAGCCTGCGCTGGTTTGTAACCATCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050026.7 ENSMUST00000108835.2 |
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| CDS CCA 72 bp | GTCAGATACCAGGCGGTGCTTGACATGCAGGTGTCCTaGTACCATCATGGCCAGGAAGTTGTCCATGACAAC | + |
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Preference number: 6 (lower is better) Translates to: VRYQAVLDMQVS*YHHGQEVVHDN Trigger: GTTGTCATGGACAACTTCCTGGCCATGATGGTACCAGGACACCTGCATGTCAAGCACCGCCTGGTATCTGAC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050026.7 ENSMUST00000108835.2 |
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| CDS CAA 72 bp | ATTTTGGTGGCTCCAATGTCAGATACCAGGCGGTGCTaGACATGCAGGTGTCCTGGTACCATCATGGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: ILVAPMSDTRRC*TCRCPGTIMAR Trigger: CCTGGCCATGATGGTACCAGGACACCTGCATGTCAAGCACCGCCTGGTATCTGACATTGGAGCCACCAAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050026.7 ENSMUST00000108835.2 |
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| CDS CAA 90 bp | CGGTGCTTGACATGCAGGTGTCCTGGTACCATCATGGCCAGGAAGTaGTCCATGACAACTGATAGGTCTGCCAACTGCTGTTCCACAAGC | + |
|
Preference number: 6 (lower is better) Translates to: RCLTCRCPGTIMARK*SMTTDRSANCCSTS Trigger: GCTTGTGGAACAGCAGTTGGCAGACCTATCAGTTGTCATGGACAACTTCCTGGCCATGATGGTACCAGGACACCTGCATGTCAAGCACCG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050026.7 ENSMUST00000108835.2 |
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| CDS CAA 90 bp | ATGTGTGGGATTTTGGTGGCTCCAATGTCAGATACCAGGCGGTGCTaGACATGCAGGTGTCCTGGTACCATCATGGCCAGGAAGTTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: MCGILVAPMSDTRRC*TCRCPGTIMARKLS Trigger: GGACAACTTCCTGGCCATGATGGTACCAGGACACCTGCATGTCAAGCACCGCCTGGTATCTGACATTGGAGCCACCAAAATCCCACACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050026.7 ENSMUST00000108835.2 |
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| CDS CCA 72 bp | TTCTTCATGCGCTGGAACTTCCAGGGATCAATGAGCTaGAACATGGTGTTAGGTAGCACCAGCGGGTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: FFMRWNFQGSMS*NMVLGSTSGFW Trigger: CCAGAACCCGCTGGTGCTACCTAACACCATGTTCCAGCTCATTGATCCCTGGAAGTTCCAGCGCATGAAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050026.7 ENSMUST00000108835.2 |
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| CDS CCA 72 bp | AACTGGCATCTTCGTGCTCAGCATAAGCCGGATGTGTaGGATTTTGGTGGCTCCAATGTCAGATACCAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: NWHLRAQHKPDV*DFGGSNVRYQA Trigger: CGCCTGGTATCTGACATTGGAGCCACCAAAATCCCACACATCCGGCTTATGCTGAGCACGAAGATGCCAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050026.7 ENSMUST00000108835.2 |
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| CDS CAA 72 bp | ATCTTCGTGCTCAGCATAAGCCGGATGTGTGGGATTTaGGTGGCTCCAATGTCAGATACCAGGCGGTGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: IFVLSISRMCGI*VAPMSDTRRCL Trigger: CAAGCACCGCCTGGTATCTGACATTGGAGCCACCAAAATCCCACACATCCGGCTTATGCTGAGCACGAAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050026.7 ENSMUST00000108835.2 |
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| CDS CAA 90 bp | ATAACTGGCATCTTCGTGCTCAGCATAAGCCGGATGTGTGGGATTTaGGTGGCTCCAATGTCAGATACCAGGCGGTGCTTGACATGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: ITGIFVLSISRMCGI*VAPMSDTRRCLTCR Trigger: CCTGCATGTCAAGCACCGCCTGGTATCTGACATTGGAGCCACCAAAATCCCACACATCCGGCTTATGCTGAGCACGAAGATGCCAGTTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050026.7 ENSMUST00000108835.2 |
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| CDS TCA 72 bp | GGTGTCCTGGTACCATCATGGCCAGGAAGTTGTCCATaGCAACTGATAGGTCTGCCAACTGCTGTTCCACAA | + |
|
Preference number: 6 (lower is better) Translates to: GVLVPSWPGSCP*QLIGLPTAVPQ Trigger: TTGTGGAACAGCAGTTGGCAGACCTATCAGTTGTCATGGACAACTTCCTGGCCATGATGGTACCAGGACACC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050026.7 ENSMUST00000108835.2 |
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| CDS CAA 72 bp | ACATGCAGGTGTCCTGGTACCATCATGGCCAGGAAGTaGTCCATGACAACTGATAGGTCTGCCAACTGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: TCRCPGTIMARK*SMTTDRSANCC Trigger: ACAGCAGTTGGCAGACCTATCAGTTGTCATGGACAACTTCCTGGCCATGATGGTACCAGGACACCTGCATGT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050026.7 ENSMUST00000108835.2 |
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