RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FNDC1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000071984

Ensembl transcript IDs: ENSMUST00000097425.10, ENSMUST00000167580.8, ENSMUST00000239425.2

Found 552 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCAGTGCTGTTCCCTGGAGATCCCAGAGTGTTCAGGTTTTGTGCCTaGAGAGTCTGGAAATCACACTGGATCCACTGCAGGGTTGATGTC +
Preference number: 1 (lower is better)
Translates to: PVLFPGDPRVFRFCA*RVWKSHWIHCRVDV
Trigger: GACATCAACCCTGCAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTGGGATCTCCAGGGAACAGCACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
3UTR TCA 90 bp TTAAAGTTGGCTGATTCGAAGAAGAGAGGAGCAAAGAGCATTCTGTaGAGCCAGCAGAGCACGCCAGTGCTGTTCCCTGGAGATCCCAGA +
Preference number: 1 (lower is better)
Translates to: LKLADSKKRGAKSIL*SQQSTPVLFPGDPR
Trigger: TCTGGGATCTCCAGGGAACAGCACTGGCGTGCTCTGCTGGCTTCACAGAATGCTCTTTGCTCCTCTCTTCTTCGAATCAGCCAACTTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
3UTR CCA 90 bp TTCCCTGGAGATCCCAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTaGAAATCACACTGGATCCACTGCAGGGTTGATGTCTCTGGAATG +
Preference number: 1 (lower is better)
Translates to: FPGDPRVFRFCAWRV*KSHWIHCRVDVSGM
Trigger: CATTCCAGAGACATCAACCCTGCAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTGGGATCTCCAGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
3UTR CCA 90 bp CCCAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTaGATCCACTGCAGGGTTGATGTCTCTGGAATGTGTGATTACAAA +
Preference number: 1 (lower is better)
Translates to: PRVFRFCAWRVWKSH*IHCRVDVSGMCDYK
Trigger: TTTGTAATCACACATTCCAGAGACATCAACCCTGCAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
3UTR GCA 90 bp TTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCACTaGAGGGTTGATGTCTCTGGAATGTGTGATTACAAACGATCAAAG +
Preference number: 1 (lower is better)
Translates to: FRFCAWRVWKSHWIH*RVDVSGMCDYKRSK
Trigger: CTTTGATCGTTTGTAATCACACATTCCAGAGACATCAACCCTGCAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
3UTR TCA 90 bp TACAAACGATCAAAGTGCAGAGGCGAAGTGAAGTTTCAGCAAAACTaGATTGTATTTATAGTTCAGACCAAGAAATGTGGCCAAATTCTG +
Preference number: 1 (lower is better)
Translates to: YKRSKCRGEVKFQQN*IVFIVQTKKCGQIL
Trigger: CAGAATTTGGCCACATTTCTTGGTCTGAACTATAAATACAATTCAGTTTTGCTGAAACTTCACTTCGCCTCTGCACTTTGATCGTTTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
3UTR-3UTR TCA 90 bp CCAGGTCCACCCTGTGGCCTCTTGACACACTGGGGCAGCGGGCTTGGAACACTGCACAGGCTGGAAGGATaGACTTGCAGCAGGCCCATC +
Preference number: 2 (lower is better)
Translates to: PGPPCGLLTHWGSGLGTLHRLEG*TCSRPI
Trigger: GATGGGCCTGCTGCAAGTTCATCCTTCCAGCCTGTG...CAGTGTTCCAAGCCCGCTGCCCCAGTGTGTCAAGAGGCCACAGGGTGGACCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
3UTR-3UTR TCA 90 bp AGAAGAGAGGAGCAAAGAGCATTCTGTGAAGCCAGCAGAGCACGCCAGTGCTGTCACCCTGTGGCCTCTTaGCACACTGGGGCAGCGGGC +
Preference number: 2 (lower is better)
Translates to: RREEQRAFCEASRARQCCHPVAS*HTGAAG
Trigger: GCCCGCTGCCCCAGTGTGTCAAGAGGCCACAGGGTG...ACAGCACTGGCGTGCTCTGCTGGCTTCACAGAATGCTCTTTGCTCCTCTCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
3UTR CAA 90 bp GAGCACGCCAGTGCTGTTCCCTGGAGATCCCAGAGTGTTCAGGTTTaGTGCCTGGAGAGTCTGGAAATCACACTGGATCCACTGCAGGGT +
Preference number: 2 (lower is better)
Translates to: EHASAVPWRSQSVQV*CLESLEITLDPLQG
Trigger: ACCCTGCAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTGGGATCTCCAGGGAACAGCACTGGCGTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
3UTR-3UTR CCA 90 bp TCTGGAAATCACACTGGATCCACTGCAGGGTTGATGTCTCTGGAATGTGTGATTGGCCTCTTGACACACTaGGGCAGCGGGCTTGGAACA +
Preference number: 2 (lower is better)
Translates to: SGNHTGSTAGLMSLECVIGLLTH*GSGLGT
Trigger: TGTTCCAAGCCCGCTGCCCCAGTGTGTCAAGAGGCC...AATCACACATTCCAGAGACATCAACCCTGCAGTGGATCCAGTGTGATTTCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
3UTR-3UTR GCA 90 bp TGTGAAGCCAGCAGAGCACGCCAGTGCTGTTCCCTGGAGATCCCAGAGTGTTCATACAAACGATCAAAGTaGAGAGGCGAAGTGAAGTTT +
Preference number: 2 (lower is better)
Translates to: CEASRARQCCSLEIPECSYKRSK*RGEVKF
Trigger: AAACTTCACTTCGCCTCTGCACTTTGATCGTTTGTA...TGAACACTCTGGGATCTCCAGGGAACAGCACTGGCGTGCTCTGCTGGCTTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
3UTR-3UTR GCA 90 bp AGAAGAGAGGAGCAAAGAGCATTCTGTGAAGCCAGCAGAGCACGCCAGTGCTGTAGTGTTCAGGTTTTGTaGCTGGAGAGTCTGGAAATC +
Preference number: 2 (lower is better)
Translates to: RREEQRAFCEASRARQCCSVQVL*LESLEI
Trigger: GATTTCCAGACTCTCCAGGCACAAAACCTGAACACT...ACAGCACTGGCGTGCTCTGCTGGCTTCACAGAATGCTCTTTGCTCCTCTCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
3UTR-3UTR TCA 90 bp AGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCACTGCAGTGCAGAGGCGAAGTaGAGTTTCAGCAAAACTGAA +
Preference number: 2 (lower is better)
Translates to: RVFRFCAWRVWKSHWIHCSAEAK*SFSKTE
Trigger: TTCAGTTTTGCTGAAACTTCACTTCGCCTCTGCACT...GCAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
3UTR-3UTR GCA 90 bp TTACAAACGATCAAAGTGCAGAGGCGAAGTGAAGTTTCAGCAAAACTGAATTGTCTGAAGAGGCCCAAATaGCAGGTCCACCCTGTGGCC +
Preference number: 2 (lower is better)
Translates to: LQTIKVQRRSEVSAKLNCLKRPK*QVHPVA
Trigger: GGCCACAGGGTGGACCTGGCATTTGGGCCTCTTCAG...ACAATTCAGTTTTGCTGAAACTTCACTTCGCCTCTGCACTTTGATCGTTTGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
3UTR CAA 90 bp TTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCACTGCAGGGTaGATGTCTCTGGAATGTGTGATTACAAACGATCAAAGTGCAGAG +
Preference number: 2 (lower is better)
Translates to: FVPGESGNHTGSTAG*MSLECVITNDQSAE
Trigger: CTCTGCACTTTGATCGTTTGTAATCACACATTCCAGAGACATCAACCCTGCAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
3UTR-3UTR TCA 90 bp ATTGAGAATTTACAAATAAGATCTGAGGCACTTAGCCCAGTGATGGATAGGTCTCACAGGCTGGAAGGATaGACTTGCAGCAGGCCCATC +
Preference number: 2 (lower is better)
Translates to: IENLQIRSEALSPVMDRSHRLEG*TCSRPI
Trigger: GATGGGCCTGCTGCAAGTTCATCCTTCCAGCCTGTG...AGACCTATCCATCACTGGGCTAAGTGCCTCAGATCTTATTTGTAAATTCTCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
3UTR-3UTR GCA 90 bp CACTGGATCCACTGCAGGGTTGATGTCTCTGGAATGTGTGATTACAAACGATCAACACTGTCTTTCTTTTaGCCAGAATCCCTAGCGCAG +
Preference number: 2 (lower is better)
Translates to: HWIHCRVDVSGMCDYKRSTLSFF*PESLAQ
Trigger: CTGCGCTAGGGATTCTGGGCAAAAGAAAGACAGTGT...TGATCGTTTGTAATCACACATTCCAGAGACATCAACCCTGCAGTGGATCCAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
3UTR-3UTR CCA 90 bp ATTGAGAATTTACAAATAAGATCTGAGGCACTTAGCCCAGTGATGGATAGGTCTGCCAGTGCTGTTCCCTaGAGATCCCAGAGTGTTCAG +
Preference number: 2 (lower is better)
Translates to: IENLQIRSEALSPVMDRSASAVP*RSQSVQ
Trigger: CTGAACACTCTGGGATCTCCAGGGAACAGCACTGGC...AGACCTATCCATCACTGGGCTAAGTGCCTCAGATCTTATTTGTAAATTCTCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
3UTR-3UTR TCA 90 bp TTACAAACGATCAAAGTGCAGAGGCGAAGTGAAGTTTCAGCAAAACTGAATTGTTGGCCAAATTCTGACTaGAGAGGCCCAAATGCCAGG +
Preference number: 2 (lower is better)
Translates to: LQTIKVQRRSEVSAKLNCWPNSD*RGPNAR
Trigger: CCTGGCATTTGGGCCTCTTCAGTCAGAATTTGGCCA...ACAATTCAGTTTTGCTGAAACTTCACTTCGCCTCTGCACTTTGATCGTTTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
3UTR-3UTR GCA 90 bp ATTGAGAATTTACAAATAAGATCTGAGGCACTTAGCCCAGTGATGGATAGGTCTACACTGTCTTTCTTTTaGCCAGAATCCCTAGCGCAG +
Preference number: 2 (lower is better)
Translates to: IENLQIRSEALSPVMDRSTLSFF*PESLAQ
Trigger: CTGCGCTAGGGATTCTGGGCAAAAGAAAGACAGTGT...AGACCTATCCATCACTGGGCTAAGTGCCTCAGATCTTATTTGTAAATTCTCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
3UTR CCA 72 bp ACCCTGTGGCCTCTTGACACACTGGGGCAGCGGGCTTaGAACACTGTCTTTCTTTTGCCCAGAATCCCTAGC +
Preference number: 3 (lower is better)
Translates to: TLWPLDTLGQRA*NTVFLLPRIPS
Trigger: GCTAGGGATTCTGGGCAAAAGAAAGACAGTGTTCCAAGCCCGCTGCCCCAGTGTGTCAAGAGGCCACAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
3UTR GCA 72 bp GCTGTTCCCTGGAGATCCCAGAGTGTTCAGGTTTTGTaGCTGGAGAGTCTGGAAATCACACTGGATCCACTG +
Preference number: 3 (lower is better)
Translates to: AVPWRSQSVQVL*LESLEITLDPL
Trigger: CAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTGGGATCTCCAGGGAACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
3UTR GCA 72 bp CAAAGAGCATTCTGTGAAGCCAGCAGAGCACGCCAGTaGTGTTCCCTGGAGATCCCAGAGTGTTCAGGTTTT +
Preference number: 3 (lower is better)
Translates to: QRAFCEASRARQ*CSLEIPECSGF
Trigger: AAAACCTGAACACTCTGGGATCTCCAGGGAACAGCACTGGCGTGCTCTGCTGGCTTCACAGAATGCTCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
3UTR CCA 72 bp TTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTaGATCCACTGCAGGGTTGATGTCTCTGGAATGTGT +
Preference number: 3 (lower is better)
Translates to: FRFCAWRVWKSH*IHCRVDVSGMC
Trigger: ACACATTCCAGAGACATCAACCCTGCAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
3UTR GCA 72 bp TGTGCCTGGAGAGTCTGGAAATCACACTGGATCCACTaGAGGGTTGATGTCTCTGGAATGTGTGATTACAAA +
Preference number: 3 (lower is better)
Translates to: CAWRVWKSHWIH*RVDVSGMCDYK
Trigger: TTTGTAATCACACATTCCAGAGACATCAACCCTGCAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
3UTR-3UTR CAA 90 bp ATTGAGAATTTACAAATAAGATCTGAGGCACTTAGCCCAGTGATGGATAGGTCTGGATCCACTGCAGGGTaGATGTCTCTGGAATGTGTG +
Preference number: 3 (lower is better)
Translates to: IENLQIRSEALSPVMDRSGSTAG*MSLECV
Trigger: CACACATTCCAGAGACATCAACCCTGCAGTGGATCC...AGACCTATCCATCACTGGGCTAAGTGCCTCAGATCTTATTTGTAAATTCTCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
3UTR TCA 72 bp TCAAAGTGCAGAGGCGAAGTGAAGTTTCAGCAAAACTaGATTGTATTTATAGTTCAGACCAAGAAATGTGGC +
Preference number: 3 (lower is better)
Translates to: SKCRGEVKFQQN*IVFIVQTKKCG
Trigger: GCCACATTTCTTGGTCTGAACTATAAATACAATTCAGTTTTGCTGAAACTTCACTTCGCCTCTGCACTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp CCAGGTCCACCCTGTGGCCTCTTGACACACTGGGGCAGCGGGCTTGGAACACTGTGGGAACCCTCATTCTaGTTCTGGGGAGCCGAGGGG +
Preference number: 4 (lower is better)
Translates to: PGPPCGLLTHWGSGLGTLWEPSF*FWGAEG
Trigger: CCCCTCGGCTCCCCAGAATCAGAATGAGGGTTCCCA...CAGTGTTCCAAGCCCGCTGCCCCAGTGTGTCAAGAGGCCACAGGGTGGACCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp CCAGGTCCACCCTGTGGCCTCTTGACACACTGGGGCAGCGGGCTTGGAACACTGGAAGGCTTTGGAGTGTaGCCCCGGGCCTCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: PGPPCGLLTHWGSGLGTLEGFGV*PRASPV
Trigger: AACAGGAGAGGCCCGGGGCCACACTCCAAAGCCTTC...CAGTGTTCCAAGCCCGCTGCCCCAGTGTGTCAAGAGGCCACAGGGTGGACCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR GCA 90 bp CCAGGTCCACCCTGTGGCCTCTTGACACACTGGGGCAGCGGGCTTGGAACACTGGCTTGCGCTGGGACTTaGAGTGACAGGGTTTCGAGG +
Preference number: 4 (lower is better)
Translates to: PGPPCGLLTHWGSGLGTLACAGT*SDRVSR
Trigger: CCTCGAAACCCTGTCACTGCAAGTCCCAGCGCAAGC...CAGTGTTCCAAGCCCGCTGCCCCAGTGTGTCAAGAGGCCACAGGGTGGACCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp TCTGTGAAGCCAGCAGAGCACGCCAGTGCTGTTCCCTGGAGATCCCAGAGTGTTCGTGAGCGGAGTGAGTaGGAGCCCGAGGGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: SVKPAEHASAVPWRSQSVRERSE*EPEGLG
Trigger: GCCCAGACCCTCGGGCTCCCACTCACTCCGCTCACG...AACACTCTGGGATCTCCAGGGAACAGCACTGGCGTGCTCTGCTGGCTTCACAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp CAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCACTGGCAGCAGTGCCGCCCTaGGCAGCAGGCGCGGGGACG +
Preference number: 4 (lower is better)
Translates to: QSVQVLCLESLEITLDPLAAVPP*AAGAGT
Trigger: CGTCCCCGCGCCTGCTGCTCAGGGCGGCACTGCTGC...CAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp TCTGTGAAGCCAGCAGAGCACGCCAGTGCTGTTCCCTGGAGATCCCAGAGTGTTGGACAGCCTGTCGTCTaGGGCTCGGACACGCATACG +
Preference number: 4 (lower is better)
Translates to: SVKPAEHASAVPWRSQSVGQPVV*GSDTHT
Trigger: CGTATGCGTGTCCGAGCCTCAGACGACAGGCTGTCC...AACACTCTGGGATCTCCAGGGAACAGCACTGGCGTGCTCTGCTGGCTTCACAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp TGTGAAGCCAGCAGAGCACGCCAGTGCTGTTCCCTGGAGATCCCAGAGTGTTCACGGGTCTGTTGGATCTaGGCAGTGGCCTCAGCTCGC +
Preference number: 4 (lower is better)
Translates to: CEASRARQCCSLEIPECSRVCWI*AVASAR
Trigger: GCGAGCTGAGGCCACTGCTCAGATCCAACAGACCCG...TGAACACTCTGGGATCTCCAGGGAACAGCACTGGCGTGCTCTGCTGGCTTCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR GCA 90 bp CCAGGTCCACCCTGTGGCCTCTTGACACACTGGGGCAGCGGGCTTGGAACACTGGCTGGGGAAGAAGGCTaGTGCAGTTTCTCAGGTTTC +
Preference number: 4 (lower is better)
Translates to: PGPPCGLLTHWGSGLGTLAGEEG*CSFSGF
Trigger: GAAACCTGAGAAACTGCAGCAGCCTTCTTCCCCAGC...CAGTGTTCCAAGCCCGCTGCCCCAGTGTGTCAAGAGGCCACAGGGTGGACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp CCAGGTCCACCCTGTGGCCTCTTGACACACTGGGGCAGCGGGCTTGGAACACTGGGAAGCATCTTTGGGTaGGTCCCATGTGACCTTCAG +
Preference number: 4 (lower is better)
Translates to: PGPPCGLLTHWGSGLGTLGSIFG*VPCDLQ
Trigger: CTGAAGGTCACATGGGACCCACCCAAAGATGCTTCC...CAGTGTTCCAAGCCCGCTGCCCCAGTGTGTCAAGAGGCCACAGGGTGGACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp GCCTGGAGAGTCTGGAAATCACACTGGATCCACTGCAGGGTTGATGTCTCTGGACGTGAGCGGAGTGAGTaGGAGCCCGAGGGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: AWRVWKSHWIHCRVDVSGRERSE*EPEGLG
Trigger: GCCCAGACCCTCGGGCTCCCACTCACTCCGCTCACG...TCCAGAGACATCAACCCTGCAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp CCCTGTGGCCTCTTGACACACTGGGGCAGCGGGCTTGGAACACTGTCTTTCTTTGCGGCCGGGTTGTGGTaGTCAGCACAGTGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: PCGLLTHWGSGLGTLSFFAAGLW*SAQWWL
Trigger: CAACCACCACTGTGCTGACCACCACAACCCGGCCGC...AAAGAAAGACAGTGTTCCAAGCCCGCTGCCCCAGTGTGTCAAGAGGCCACAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp TGTGAAGCCAGCAGAGCACGCCAGTGCTGTTCCCTGGAGATCCCAGAGTGTTCAGCGGCCGGGTTGTGGTaGTCAGCACAGTGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: CEASRARQCCSLEIPECSAAGLW*SAQWWL
Trigger: CAACCACCACTGTGCTGACCACCACAACCCGGCCGC...TGAACACTCTGGGATCTCCAGGGAACAGCACTGGCGTGCTCTGCTGGCTTCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp CCAGGTCCACCCTGTGGCCTCTTGACACACTGGGGCAGCGGGCTTGGAACACTGGGAGCACGGGGCTGTTaGGTCTTTACTGAGGTATGT +
Preference number: 4 (lower is better)
Translates to: PGPPCGLLTHWGSGLGTLGARGC*VFTEVC
Trigger: ACATACCTCAGTAAAGACCCAACAGCCCCGTGCTCC...CAGTGTTCCAAGCCCGCTGCCCCAGTGTGTCAAGAGGCCACAGGGTGGACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp CCCTGTGGCCTCTTGACACACTGGGGCAGCGGGCTTGGAACACTGTCTTTCTTTGGGCTCACCACCTGGTaGCCTCACAACCAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: PCGLLTHWGSGLGTLSFFGLTTW*PHNQQR
Trigger: CCTCTGCTGGTTGTGAGGCCACCAGGTGGTGAGCCC...AAAGAAAGACAGTGTTCCAAGCCCGCTGCCCCAGTGTGTCAAGAGGCCACAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR GCA 90 bp CCCTGTGGCCTCTTGACACACTGGGGCAGCGGGCTTGGAACACTGTCTTTCTTTTTGCCATGTCTCCCCTaGCCAAAGAGGGGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: PCGLLTHWGSGLGTLSFFLPCLP*PKRGRP
Trigger: TGGCCTCCCCCTCTTTGGGCAGGGGAGACATGGCAA...AAAGAAAGACAGTGTTCCAAGCCCGCTGCCCCAGTGTGTCAAGAGGCCACAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR GCA 90 bp AGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCACTGCCGCCAGGAGCAGCAGTaGCGCCCTGAGCAGCAGGCG +
Preference number: 4 (lower is better)
Translates to: RVFRFCAWRVWKSHWIHCRQEQQ*RPEQQA
Trigger: CGCCTGCTGCTCAGGGCGGCACTGCTGCTCCTGGCG...GCAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp TGTGAAGCCAGCAGAGCACGCCAGTGCTGTTCCCTGGAGATCCCAGAGTGTTCAGGTTCTCAGGTGCAGTaGTGGGAGCCGATTCTGGCG +
Preference number: 4 (lower is better)
Translates to: CEASRARQCCSLEIPECSGSQVQ*WEPILA
Trigger: CGCCAGAATCGGCTCCCACCACTGCACCTGAGAACC...TGAACACTCTGGGATCTCCAGGGAACAGCACTGGCGTGCTCTGCTGGCTTCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp TGTGAAGCCAGCAGAGCACGCCAGTGCTGTTCCCTGGAGATCCCAGAGTGTTCAGAAGGCTTTGGAGTGTaGCCCCGGGCCTCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: CEASRARQCCSLEIPECSEGFGV*PRASPV
Trigger: AACAGGAGAGGCCCGGGGCCACACTCCAAAGCCTTC...TGAACACTCTGGGATCTCCAGGGAACAGCACTGGCGTGCTCTGCTGGCTTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp CCAGGTCCACCCTGTGGCCTCTTGACACACTGGGGCAGCGGGCTTGGAACACTGTTTGGGGAATCTGCTTaGATTTCTGCTGTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: PGPPCGLLTHWGSGLGTLFGESA*ISAVGR
Trigger: CCTGCCCACAGCAGAAATCCAAGCAGATTCCCCAAA...CAGTGTTCCAAGCCCGCTGCCCCAGTGTGTCAAGAGGCCACAGGGTGGACCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp CCCTGTGGCCTCTTGACACACTGGGGCAGCGGGCTTGGAACACTGTCTTTCTTTGAGCCAGGCCTAGTGTaGGATGCTGGCAGCGAAGGA +
Preference number: 4 (lower is better)
Translates to: PCGLLTHWGSGLGTLSFFEPGLV*DAGSEG
Trigger: TCCTTCGCTGCCAGCATCCCACACTAGGCCTGGCTC...AAAGAAAGACAGTGTTCCAAGCCCGCTGCCCCAGTGTGTCAAGAGGCCACAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp CCAGGTCCACCCTGTGGCCTCTTGACACACTGGGGCAGCGGGCTTGGAACACTGCATAGTCCTCTTCTGTaGGTGGTGCAGTGTCAGTCT +
Preference number: 4 (lower is better)
Translates to: PGPPCGLLTHWGSGLGTLHSPLL*VVQCQS
Trigger: AGACTGACACTGCACCACCCACAGAAGAGGACTATG...CAGTGTTCCAAGCCCGCTGCCCCAGTGTGTCAAGAGGCCACAGGGTGGACCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp CCCTGTGGCCTCTTGACACACTGGGGCAGCGGGCTTGGAACACTGTCTTTCTTTCGAATGGGATCCAGATaGGCTCACCACCTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: PCGLLTHWGSGLGTLSFFRMGSR*AHHLVA
Trigger: GGCCACCAGGTGGTGAGCCCATCTGGATCCCATTCG...AAAGAAAGACAGTGTTCCAAGCCCGCTGCCCCAGTGTGTCAAGAGGCCACAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp AGAAGAGAGGAGCAAAGAGCATTCTGTGAAGCCAGCAGAGCACGCCAGTGCTGTTGTGGCAGCAGTGGTTaGGGGCATGGTGCTGGTCGG +
Preference number: 4 (lower is better)
Translates to: RREEQRAFCEASRARQCCCGSSG*GHGAGR
Trigger: CCGACCAGCACCATGCCCTCAACCACTGCTGCCACA...ACAGCACTGGCGTGCTCTGCTGGCTTCACAGAATGCTCTTTGCTCCTCTCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR GCA 90 bp CCAGGTCCACCCTGTGGCCTCTTGACACACTGGGGCAGCGGGCTTGGAACACTGGTCAAGGTTCCTGTCTaGATATTTGTTGTTCCGGGG +
Preference number: 4 (lower is better)
Translates to: PGPPCGLLTHWGSGLGTLVKVPV*IFVVPG
Trigger: CCCCGGAACAACAAATATGCAGACAGGAACCTTGAC...CAGTGTTCCAAGCCCGCTGCCCCAGTGTGTCAAGAGGCCACAGGGTGGACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR GCA 90 bp AGGAGCAAAGAGCATTCTGTGAAGCCAGCAGAGCACGCCAGTGCTGTTCCCTGGGCTTGCGCTGGGACTTaGAGTGACAGGGTTTCGAGG +
Preference number: 4 (lower is better)
Translates to: RSKEHSVKPAEHASAVPWACAGT*SDRVSR
Trigger: CCTCGAAACCCTGTCACTGCAAGTCCCAGCGCAAGC...CCAGGGAACAGCACTGGCGTGCTCTGCTGGCTTCACAGAATGCTCTTTGCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR GCA 90 bp CCCTGTGGCCTCTTGACACACTGGGGCAGCGGGCTTGGAACACTGTCTTTCTTTTACCTTGGCCAGGAGTaGGTGCTTGCGCTGGGACTT +
Preference number: 4 (lower is better)
Translates to: PCGLLTHWGSGLGTLSFFYLGQE*VLALGL
Trigger: AAGTCCCAGCGCAAGCACGCACTCCTGGCCAAGGTA...AAAGAAAGACAGTGTTCCAAGCCCGCTGCCCCAGTGTGTCAAGAGGCCACAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp CCAGAATCCCTAGCGCAGGTTAGTCACACAGGCTGGAAGGATGAACTTGCAGCAGGCTCCAGACAGGCGTaGCGCCTTCCATGCAACGGA +
Preference number: 4 (lower is better)
Translates to: PESLAQVSHTGWKDELAAGSRQA*RLPCNG
Trigger: TCCGTTGCATGGAAGGCGCCACGCCTGTCTGGAGCC...TGCTGCAAGTTCATCCTTCCAGCCTGTGTGACTAACCTGCGCTAGGGATTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp TGTGAAGCCAGCAGAGCACGCCAGTGCTGTTCCCTGGAGATCCCAGAGTGTTCAACCCCGAGATCTTCGTaGGCTCTTGGCTCCAGACAG +
Preference number: 4 (lower is better)
Translates to: CEASRARQCCSLEIPECSTPRSS*ALGSRQ
Trigger: CTGTCTGGAGCCAAGAGCCCACGAAGATCTCGGGGT...TGAACACTCTGGGATCTCCAGGGAACAGCACTGGCGTGCTCTGCTGGCTTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp GCCTGGAGAGTCTGGAAATCACACTGGATCCACTGCAGGGTTGATGTCTCTGGACTGGCAGGCCAGTCCTaGCTGGAGTCCTACCAGGAG +
Preference number: 4 (lower is better)
Translates to: AWRVWKSHWIHCRVDVSGLAGQS*LESYQE
Trigger: CTCCTGGTAGGACTCCAGCCAGGACTGGCCTGCCAG...TCCAGAGACATCAACCCTGCAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp CCAGAATCCCTAGCGCAGGTTAGTCACACAGGCTGGAAGGATGAACTTGCAGCACTGGCAGGCCAGTCCTaGCTGGAGTCCTACCAGGAG +
Preference number: 4 (lower is better)
Translates to: PESLAQVSHTGWKDELAALAGQS*LESYQE
Trigger: CTCCTGGTAGGACTCCAGCCAGGACTGGCCTGCCAG...TGCTGCAAGTTCATCCTTCCAGCCTGTGTGACTAACCTGCGCTAGGGATTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp TCTGTGAAGCCAGCAGAGCACGCCAGTGCTGTTCCCTGGAGATCCCAGAGTGTTAAGCTGGCCCCTCTCTaGGAGCCTCTTCTCAGAGTG +
Preference number: 4 (lower is better)
Translates to: SVKPAEHASAVPWRSQSVKLAPL*EPLLRV
Trigger: CACTCTGAGAAGAGGCTCCCAGAGAGGGGCCAGCTT...AACACTCTGGGATCTCCAGGGAACAGCACTGGCGTGCTCTGCTGGCTTCACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp AGGAGCAAAGAGCATTCTGTGAAGCCAGCAGAGCACGCCAGTGCTGTTCCCTGGCTGGTGCCATTCTTCTaGGAACAGTGGACCCAGGGG +
Preference number: 4 (lower is better)
Translates to: RSKEHSVKPAEHASAVPWLVPFF*EQWTQG
Trigger: CCCCTGGGTCCACTGTTCCCAGAAGAATGGCACCAG...CCAGGGAACAGCACTGGCGTGCTCTGCTGGCTTCACAGAATGCTCTTTGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp TGTGAAGCCAGCAGAGCACGCCAGTGCTGTTCCCTGGAGATCCCAGAGTGTTCACTGGTGCCATTCTTCTaGGAACAGTGGACCCAGGGG +
Preference number: 4 (lower is better)
Translates to: CEASRARQCCSLEIPECSLVPFF*EQWTQG
Trigger: CCCCTGGGTCCACTGTTCCCAGAAGAATGGCACCAG...TGAACACTCTGGGATCTCCAGGGAACAGCACTGGCGTGCTCTGCTGGCTTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp TGTGAAGCCAGCAGAGCACGCCAGTGCTGTTCCCTGGAGATCCCAGAGTGTTCATCGTGGAAGAGTAGGTaGAAGGGGCCCGGGTGGTAT +
Preference number: 4 (lower is better)
Translates to: CEASRARQCCSLEIPECSSWKSR*KGPGWY
Trigger: ATACCACCCGGGCCCCTTCCACCTACTCTTCCACGA...TGAACACTCTGGGATCTCCAGGGAACAGCACTGGCGTGCTCTGCTGGCTTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp TCTGTGAAGCCAGCAGAGCACGCCAGTGCTGTTCCCTGGAGATCCCAGAGTGTTTCGTGGAAGAGTAGGTaGAAGGGGCCCGGGTGGTAT +
Preference number: 4 (lower is better)
Translates to: SVKPAEHASAVPWRSQSVSWKSR*KGPGWY
Trigger: ATACCACCCGGGCCCCTTCCACCTACTCTTCCACGA...AACACTCTGGGATCTCCAGGGAACAGCACTGGCGTGCTCTGCTGGCTTCACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp GCCTGGAGAGTCTGGAAATCACACTGGATCCACTGCAGGGTTGATGTCTCTGGAGGGCTCACCACCTGGTaGCCTCACAACCAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: AWRVWKSHWIHCRVDVSGGLTTW*PHNQQR
Trigger: CCTCTGCTGGTTGTGAGGCCACCAGGTGGTGAGCCC...TCCAGAGACATCAACCCTGCAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp AGGAGCAAAGAGCATTCTGTGAAGCCAGCAGAGCACGCCAGTGCTGTTCCCTGGATGCCTTGGCTTCAGTaGGTGGTCAACTGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: RSKEHSVKPAEHASAVPWMPWLQ*VVNWGS
Trigger: GGACCCCCAGTTGACCACCCACTGAAGCCAAGGCAT...CCAGGGAACAGCACTGGCGTGCTCTGCTGGCTTCACAGAATGCTCTTTGCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp CTCTTGACACACTGGGGCAGCGGGCTTGGAACACTGTCTTTCTTTTGCCCAGAACTGTGGGCTTGCCACTaGCTGGCCAGACTCTCAGGT +
Preference number: 4 (lower is better)
Translates to: LLTHWGSGLGTLSFFCPELWACH*LARLSG
Trigger: ACCTGAGAGTCTGGCCAGTCAGTGGCAAGCCCACAG...TTCTGGGCAAAAGAAAGACAGTGTTCCAAGCCCGCTGCCCCAGTGTGTCAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp CCAGAATCCCTAGCGCAGGTTAGTCACACAGGCTGGAAGGATGAACTTGCAGCATGGGAACCCTCATTCTaGTTCTGGGGAGCCGAGGGG +
Preference number: 4 (lower is better)
Translates to: PESLAQVSHTGWKDELAAWEPSF*FWGAEG
Trigger: CCCCTCGGCTCCCCAGAATCAGAATGAGGGTTCCCA...TGCTGCAAGTTCATCCTTCCAGCCTGTGTGACTAACCTGCGCTAGGGATTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR GCA 90 bp AGGAGCAAAGAGCATTCTGTGAAGCCAGCAGAGCACGCCAGTGCTGTTCCCTGGTGGGAGTTCGTGGACTaGAGGGACACCACATACACC +
Preference number: 4 (lower is better)
Translates to: RSKEHSVKPAEHASAVPWWEFVD*RDTTYT
Trigger: GGTGTATGTGGTGTCCCTGCAGTCCACGAACTCCCA...CCAGGGAACAGCACTGGCGTGCTCTGCTGGCTTCACAGAATGCTCTTTGCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR GCA 90 bp AGATCCCAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCTGGAGCCCAGCCCTaGCAGGAACCTGGACCCGTG +
Preference number: 4 (lower is better)
Translates to: RSQSVQVLCLESLEITLDPGAQP*QEPGPV
Trigger: CACGGGTCCAGGTTCCTGGCAGGGCTGGGCTCCAGG...ATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTGGGATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR GCA 90 bp GAAGAAGAGAGGAGCAAAGAGCATTCTGTGAAGCCAGCAGAGCACGCCAGTGCTTTGCCATGTCTCCCCTaGCCAAAGAGGGGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: EEERSKEHSVKPAEHASALPCLP*PKRGRP
Trigger: TGGCCTCCCCCTCTTTGGGCAGGGGAGACATGGCAA...AGCACTGGCGTGCTCTGCTGGCTTCACAGAATGCTCTTTGCTCCTCTCTTCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp CCAGAATCCCTAGCGCAGGTTAGTCACACAGGCTGGAAGGATGAACTTGCAGCAATCTTCGTGGGCTCTTaGCTCCAGACAGGCGTGGCG +
Preference number: 4 (lower is better)
Translates to: PESLAQVSHTGWKDELAAIFVGS*LQTGVA
Trigger: CGCCACGCCTGTCTGGAGCCAAGAGCCCACGAAGAT...TGCTGCAAGTTCATCCTTCCAGCCTGTGTGACTAACCTGCGCTAGGGATTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp CCCTGTGGCCTCTTGACACACTGGGGCAGCGGGCTTGGAACACTGTCTTTCTTTGAAAGCCCTGAGCCTTaGAGGACAGAGGGGATTTGC +
Preference number: 4 (lower is better)
Translates to: PCGLLTHWGSGLGTLSFFESPEP*RTEGIC
Trigger: GCAAATCCCCTCTGTCCTCCAAGGCTCAGGGCTTTC...AAAGAAAGACAGTGTTCCAAGCCCGCTGCCCCAGTGTGTCAAGAGGCCACAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp GAAGAAGAGAGGAGCAAAGAGCATTCTGTGAAGCCAGCAGAGCACGCCAGTGCTTCTTCTTTGCTGGTGTaGCCTGGAGCCCAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: EEERSKEHSVKPAEHASASSLLV*PGAQPC
Trigger: GCAGGGCTGGGCTCCAGGCCACACCAGCAAAGAAGA...AGCACTGGCGTGCTCTGCTGGCTTCACAGAATGCTCTTTGCTCCTCTCTTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp TTTTGCCCAGAATCCCTAGCGCAGGTTAGTCACACAGGCTGGAAGGATGAACTTGGACAGCCTGTCGTCTaGGGCTCGGACACGCATACG +
Preference number: 4 (lower is better)
Translates to: FCPESLAQVSHTGWKDELGQPVV*GSDTHT
Trigger: CGTATGCGTGTCCGAGCCTCAGACGACAGGCTGTCC...AAGTTCATCCTTCCAGCCTGTGTGACTAACCTGCGCTAGGGATTCTGGGCAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp TCTGTGAAGCCAGCAGAGCACGCCAGTGCTGTTCCCTGGAGATCCCAGAGTGTTTTGCTCCAAACGGTTTaGGAGCCGGGGCGTATGAAA +
Preference number: 4 (lower is better)
Translates to: SVKPAEHASAVPWRSQSVLLQTV*EPGRMK
Trigger: TTTCATACGCCCCGGCTCTCAAACCGTTTGGAGCAA...AACACTCTGGGATCTCCAGGGAACAGCACTGGCGTGCTCTGCTGGCTTCACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp TGTGAAGCCAGCAGAGCACGCCAGTGCTGTTCCCTGGAGATCCCAGAGTGTTCATTGTGGCCCGGATTTTaGACAGATAGCGTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: CEASRARQCCSLEIPECSLWPGF*TDSVPQ
Trigger: CTGGGGAACGCTATCTGTTCAAAATCCGGGCCACAA...TGAACACTCTGGGATCTCCAGGGAACAGCACTGGCGTGCTCTGCTGGCTTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp AGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCACTGCGCGAAGGAGCCCTGGTaGGGACTTTCGAGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: RVFRFCAWRVWKSHWIHCAKEPW*GLSRLR
Trigger: CCTCAGCCTCGAAAGTCCTCACCAGGGCTCCTTCGC...GCAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp AGGAGCAAAGAGCATTCTGTGAAGCCAGCAGAGCACGCCAGTGCTGTTCCCTGGCCCCCAGAGATTGGATaGCTGGAAGAGGAAGGTGTA +
Preference number: 4 (lower is better)
Translates to: RSKEHSVKPAEHASAVPWPPEIG*LEEEGV
Trigger: TACACCTTCCTCTTCCAGTCATCCAATCTCTGGGGG...CCAGGGAACAGCACTGGCGTGCTCTGCTGGCTTCACAGAATGCTCTTTGCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp TCTGTGAAGCCAGCAGAGCACGCCAGTGCTGTTCCCTGGAGATCCCAGAGTGTTGTGAAGACTGATTGCTaGGATTCGGGTGGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: SVKPAEHASAVPWRSQSVVKTDC*DSGGRG
Trigger: TCCTCTGCCACCCGAATCTCAGCAATCAGTCTTCAC...AACACTCTGGGATCTCCAGGGAACAGCACTGGCGTGCTCTGCTGGCTTCACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp AGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCACTGCTGTGGCAGCAGTGGTTaGGGGCATGGTGCTGGTCGG +
Preference number: 4 (lower is better)
Translates to: RVFRFCAWRVWKSHWIHCCGSSG*GHGAGR
Trigger: CCGACCAGCACCATGCCCTCAACCACTGCTGCCACA...GCAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR GCA 90 bp AGGAGCAAAGAGCATTCTGTGAAGCCAGCAGAGCACGCCAGTGCTGTTCCCTGGGGGGAAGAAGGCTGCTaGAGTTTCTCAGGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: RSKEHSVKPAEHASAVPWGEEGC*SFSGFL
Trigger: CAGGAAACCTGAGAAACTGCAGCAGCCTTCTTCCCC...CCAGGGAACAGCACTGGCGTGCTCTGCTGGCTTCACAGAATGCTCTTTGCTCCT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR GCA 90 bp CCCTGTGGCCTCTTGACACACTGGGGCAGCGGGCTTGGAACACTGTCTTTCTTTCCTTCTGGTGTCTCCTaGAGCTCTGTCAATATCCGC +
Preference number: 4 (lower is better)
Translates to: PCGLLTHWGSGLGTLSFFPSGVS*SSVNIR
Trigger: GCGGATATTGACAGAGCTGCAGGAGACACCAGAAGG...AAAGAAAGACAGTGTTCCAAGCCCGCTGCCCCAGTGTGTCAAGAGGCCACAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR GCA 90 bp TCTGGAAATCACACTGGATCCACTGCAGGGTTGATGTCTCTGGAATGTGTGATTCCCGTGGGTGGGTGCTaGCAGGCCGGATGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: SGNHTGSTAGLMSLECVIPVGGC*QAGWVS
Trigger: AGAGACCCATCCGGCCTGGCAGCACCCACCCACGGG...AATCACACATTCCAGAGACATCAACCCTGCAGTGGATCCAGTGTGATTTCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR GCA 90 bp GGGTTGATGTCTCTGGAATGTGTGATTACAAACGATCAAAGTGCAGAGGCGAAGCCCGTGGGTGGGTGCTaGCAGGCCGGATGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: GLMSLECVITNDQSAEAKPVGGC*QAGWVS
Trigger: AGAGACCCATCCGGCCTGGCAGCACCCACCCACGGG...CTTCGCCTCTGCACTTTGATCGTTTGTAATCACACATTCCAGAGACATCAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR GCA 90 bp TCTGGAAATCACACTGGATCCACTGCAGGGTTGATGTCTCTGGAATGTGTGATTCCTGGAGCCCAGCCCTaGCAGGAACCTGGACCCGTG +
Preference number: 4 (lower is better)
Translates to: SGNHTGSTAGLMSLECVIPGAQP*QEPGPV
Trigger: CACGGGTCCAGGTTCCTGGCAGGGCTGGGCTCCAGG...AATCACACATTCCAGAGACATCAACCCTGCAGTGGATCCAGTGTGATTTCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR GCA 90 bp CTCTTGACACACTGGGGCAGCGGGCTTGGAACACTGTCTTTCTTTTGCCCAGAACACTGGCCACAGGTTTaGCATGTCTCCCCTGCCCAA +
Preference number: 4 (lower is better)
Translates to: LLTHWGSGLGTLSFFCPEHWPQV*HVSPAQ
Trigger: TTGGGCAGGGGAGACATGGCAAACCTGTGGCCAGTG...TTCTGGGCAAAAGAAAGACAGTGTTCCAAGCCCGCTGCCCCAGTGTGTCAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR GCA 90 bp CCAGAATCCCTAGCGCAGGTTAGTCACACAGGCTGGAAGGATGAACTTGCAGCACTCTTCTGTGGGTGGTaGAGTGTCAGTCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: PESLAQVSHTGWKDELAALFCGW*SVSLQA
Trigger: GGCCTGGAGACTGACACTGCACCACCCACAGAAGAG...TGCTGCAAGTTCATCCTTCCAGCCTGTGTGACTAACCTGCGCTAGGGATTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR GCA 90 bp CTCTTGACACACTGGGGCAGCGGGCTTGGAACACTGTCTTTCTTTTGCCCAGAACTCTTCTGTGGGTGGTaGAGTGTCAGTCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: LLTHWGSGLGTLSFFCPELFCGW*SVSLQA
Trigger: GGCCTGGAGACTGACACTGCACCACCCACAGAAGAG...TTCTGGGCAAAAGAAAGACAGTGTTCCAAGCCCGCTGCCCCAGTGTGTCAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp AGAAGAGAGGAGCAAAGAGCATTCTGTGAAGCCAGCAGAGCACGCCAGTGCTGTGGGCTTGCCACTGACTaGCCAGACTCTCAGGTTCTC +
Preference number: 4 (lower is better)
Translates to: RREEQRAFCEASRARQCCGLATD*PDSQVL
Trigger: GAGAACCTGAGAGTCTGGCCAGTCAGTGGCAAGCCC...ACAGCACTGGCGTGCTCTGCTGGCTTCACAGAATGCTCTTTGCTCCTCTCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp CCAGGTCCACCCTGTGGCCTCTTGACACACTGGGGCAGCGGGCTTGGAACACTGAGTAGAACTGGTTGTTaGTATAGCGACAATGAAGGC +
Preference number: 4 (lower is better)
Translates to: PGPPCGLLTHWGSGLGTLSRTGC*YSDNEG
Trigger: GCCTTCATTGTCGCTATACCAACAACCAGTTCTACT...CAGTGTTCCAAGCCCGCTGCCCCAGTGTGTCAAGAGGCCACAGGGTGGACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp GAAGAAGAGAGGAGCAAAGAGCATTCTGTGAAGCCAGCAGAGCACGCCAGTGCTCCTCAGCTCGCCTTCTaGTGTCTCCTGCAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: EEERSKEHSVKPAEHASAPQLAF*CLLQLC
Trigger: ACAGAGCTGCAGGAGACACCAGAAGGCGAGCTGAGG...AGCACTGGCGTGCTCTGCTGGCTTCACAGAATGCTCTTTGCTCCTCTCTTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp TCTGTGAAGCCAGCAGAGCACGCCAGTGCTGTTCCCTGGAGATCCCAGAGTGTTCACAGTGGCTGGAAGTaGCTCTTCATCCTCACCATC +
Preference number: 4 (lower is better)
Translates to: SVKPAEHASAVPWRSQSVHSGWK*LFILTI
Trigger: GATGGTGAGGATGAAGAGCCACTTCCAGCCACTGTG...AACACTCTGGGATCTCCAGGGAACAGCACTGGCGTGCTCTGCTGGCTTCACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp CCAGAATCCCTAGCGCAGGTTAGTCACACAGGCTGGAAGGATGAACTTGCAGCAGGGACAGCTGGCGGCTaGTGGATGATGGAGGTGTTT +
Preference number: 4 (lower is better)
Translates to: PESLAQVSHTGWKDELAAGTAGG*WMMEVF
Trigger: AAACACCTCCATCATCCACCAGCCGCCAGCTGTCCC...TGCTGCAAGTTCATCCTTCCAGCCTGTGTGACTAACCTGCGCTAGGGATTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp AGGAGCAAAGAGCATTCTGTGAAGCCAGCAGAGCACGCCAGTGCTGTTCCCTGGACAGGGTTTCGAGGCTaGTACCAGGTAGGTGGATGT +
Preference number: 4 (lower is better)
Translates to: RSKEHSVKPAEHASAVPWTGFRG*YQVGGC
Trigger: ACATCCACCTACCTGGTACCAGCCTCGAAACCCTGT...CCAGGGAACAGCACTGGCGTGCTCTGCTGGCTTCACAGAATGCTCTTTGCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp CCAGAATCCCTAGCGCAGGTTAGTCACACAGGCTGGAAGGATGAACTTGCAGCATTGCCAGCTTCATCCTaGTGTTCCAGGGTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: PESLAQVSHTGWKDELAALPASS*CSRVPG
Trigger: CCCTGGGACCCTGGAACACCAGGATGAAGCTGGCAA...TGCTGCAAGTTCATCCTTCCAGCCTGTGTGACTAACCTGCGCTAGGGATTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp AGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCACTGCCGTCCCAGGATACGGTaGCAACTGTGGGCTTGCCAC +
Preference number: 4 (lower is better)
Translates to: RVFRFCAWRVWKSHWIHCRPRIR*QLWACH
Trigger: GTGGCAAGCCCACAGTTGTCACCGTATCCTGGGACG...GCAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp AGGAGCAAAGAGCATTCTGTGAAGCCAGCAGAGCACGCCAGTGCTGTTCCCTGGCCATCTGCTGAGGTTTaGGAATGGATGGGGTGGTAT +
Preference number: 4 (lower is better)
Translates to: RSKEHSVKPAEHASAVPWPSAEV*EWMGWY
Trigger: ATACCACCCCATCCATTCTCAAACCTCAGCAGATGG...CCAGGGAACAGCACTGGCGTGCTCTGCTGGCTTCACAGAATGCTCTTTGCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp TTTTGCCCAGAATCCCTAGCGCAGGTTAGTCACACAGGCTGGAAGGATGAACTTGTTGCCACTGTTCCCTaGCTGGGAGCCCATCTGCTG +
Preference number: 4 (lower is better)
Translates to: FCPESLAQVSHTGWKDELVATVP*LGAHLL
Trigger: CAGCAGATGGGCTCCCAGTCAGGGAACAGTGGCAAC...AAGTTCATCCTTCCAGCCTGTGTGACTAACCTGCGCTAGGGATTCTGGGCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp TCTGTGAAGCCAGCAGAGCACGCCAGTGCTGTTCCCTGGAGATCCCAGAGTGTTGTCACTGACGAGGTCTaGGTTGACCATTTATTCCGG +
Preference number: 4 (lower is better)
Translates to: SVKPAEHASAVPWRSQSVVTDEV*VDHLFR
Trigger: CCGGAATAAATGGTCAACTCAGACCTCGTCAGTGAC...AACACTCTGGGATCTCCAGGGAACAGCACTGGCGTGCTCTGCTGGCTTCACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR GCA 90 bp AGATCCCAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATGCGTGGCGCCTTCCATaGAACGGACAGCCTGTCGTC +
Preference number: 4 (lower is better)
Translates to: RSQSVQVLCLESLEITLDAWRLP*NGQPVV
Trigger: GACGACAGGCTGTCCGTTGCATGGAAGGCGCCACGC...ATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTGGGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR GCA 90 bp CCCTGTGGCCTCTTGACACACTGGGGCAGCGGGCTTGGAACACTGTCTTTCTTTCAGCTCATCCTCTTCTaGATGCTTGCGCTTTGTGAG +
Preference number: 4 (lower is better)
Translates to: PCGLLTHWGSGLGTLSFFQLILF*MLALCE
Trigger: CTCACAAAGCGCAAGCATGCAGAAGAGGATGAGCTG...AAAGAAAGACAGTGTTCCAAGCCCGCTGCCCCAGTGTGTCAAGAGGCCACAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR GCA 90 bp TCTGTGAAGCCAGCAGAGCACGCCAGTGCTGTTCCCTGGAGATCCCAGAGTGTTCAGCTCATCCTCTTCTaGATGCTTGCGCTTTGTGAG +
Preference number: 4 (lower is better)
Translates to: SVKPAEHASAVPWRSQSVQLILF*MLALCE
Trigger: CTCACAAAGCGCAAGCATGCAGAAGAGGATGAGCTG...AACACTCTGGGATCTCCAGGGAACAGCACTGGCGTGCTCTGCTGGCTTCACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR GCA 90 bp CCCTGTGGCCTCTTGACACACTGGGGCAGCGGGCTTGGAACACTGTCTTTCTTTTCTCTGGAAGATGGATaGACTCCACTTGCCATCTCG +
Preference number: 4 (lower is better)
Translates to: PCGLLTHWGSGLGTLSFFSLEDG*TPLAIS
Trigger: CGAGATGGCAAGTGGAGTGCATCCATCTTCCAGAGA...AAAGAAAGACAGTGTTCCAAGCCCGCTGCCCCAGTGTGTCAAGAGGCCACAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR GCA 90 bp TGTGAAGCCAGCAGAGCACGCCAGTGCTGTTCCCTGGAGATCCCAGAGTGTTCAGAAGGTGAGGGACTTTaGTCCAAACGGTTTGAGAGC +
Preference number: 4 (lower is better)
Translates to: CEASRARQCCSLEIPECSEGEGL*SKRFES
Trigger: GCTCTCAAACCGTTTGGAGCAAAGTCCCTCACCTTC...TGAACACTCTGGGATCTCCAGGGAACAGCACTGGCGTGCTCTGCTGGCTTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR GCA 90 bp AGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCACTGCGAGCTGACCGTGCCCTaGTCTGGGATGACCTTCGGT +
Preference number: 4 (lower is better)
Translates to: RVFRFCAWRVWKSHWIHCELTVP*SGMTFG
Trigger: ACCGAAGGTCATCCCAGAGCAGGGCACGGTCAGCTC...GCAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp CAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCACTGATCTTCGTGGGCTCTTaGCTCCAGACAGGCGTGGCG +
Preference number: 4 (lower is better)
Translates to: QSVQVLCLESLEITLDPLIFVGS*LQTGVA
Trigger: CGCCACGCCTGTCTGGAGCCAAGAGCCCACGAAGAT...CAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp TTTTGCCCAGAATCCCTAGCGCAGGTTAGTCACACAGGCTGGAAGGATGAACTTGCTTGTAATCCCACCTaGCCGACTCCCCCTTCTCGC +
Preference number: 4 (lower is better)
Translates to: FCPESLAQVSHTGWKDELACNPT*PTPPSR
Trigger: GCGAGAAGGGGGAGTCGGCCAGGTGGGATTACAAGC...AAGTTCATCCTTCCAGCCTGTGTGACTAACCTGCGCTAGGGATTCTGGGCAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp CTCTTGACACACTGGGGCAGCGGGCTTGGAACACTGTCTTTCTTTTGCCCAGAATGCAACTTTGGGAGCTaGGGAAGAAGGCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: LLTHWGSGLGTLSFFCPECNFGS*GRRLLQ
Trigger: CTGCAGCAGCCTTCTTCCCCAGCTCCCAAAGTTGCA...TTCTGGGCAAAAGAAAGACAGTGTTCCAAGCCCGCTGCCCCAGTGTGTCAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp GAAGAAGAGAGGAGCAAAGAGCATTCTGTGAAGCCAGCAGAGCACGCCAGTGCTTCGCTGGTGGAAGAATaGGACTGGCTCGATGCGGAT +
Preference number: 4 (lower is better)
Translates to: EEERSKEHSVKPAEHASASLVEE*DWLDAD
Trigger: ATCCGCATCGAGCCAGTCCCATTCTTCCACCAGCGA...AGCACTGGCGTGCTCTGCTGGCTTCACAGAATGCTCTTTGCTCCTCTCTTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp AGATCCCAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCTTCCGGTACAAGCTaGCCCCTCTCTGGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: RSQSVQVLCLESLEITLDPSGTS*PLSGSL
Trigger: GAGGCTCCCAGAGAGGGGCCAGCTTGTACCGGAAGG...ATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTGGGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp TCCCAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCACTAGCAGGGGACAGCTaGCGGCTGGTGGATGATGGA +
Preference number: 4 (lower is better)
Translates to: SQSVQVLCLESLEITLDPLAGDS*RLVDDG
Trigger: TCCATCATCCACCAGCCGCCAGCTGTCCCCTGCTAG...TGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp TCCCAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCATCTTCTTTGCTGGTGTaGCCTGGAGCCCAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: SQSVQVLCLESLEITLDPSSLLV*PGAQPC
Trigger: GCAGGGCTGGGCTCCAGGCCACACCAGCAAAGAAGA...TGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp AGGAGCAAAGAGCATTCTGTGAAGCCAGCAGAGCACGCCAGTGCTGTTCCCTGGAAGATGGGTTTATCCTaGGCACTGGCCACAGGTTTG +
Preference number: 4 (lower is better)
Translates to: RSKEHSVKPAEHASAVPWKMGLS*ALATGL
Trigger: CAAACCTGTGGCCAGTGCCCAGGATAAACCCATCTT...CCAGGGAACAGCACTGGCGTGCTCTGCTGGCTTCACAGAATGCTCTTTGCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp TCTGTGAAGCCAGCAGAGCACGCCAGTGCTGTTCCCTGGAGATCCCAGAGTGTTTGGTCAGCACAGTGGTaGTTGTTGTGGTTGGAAGCA +
Preference number: 4 (lower is better)
Translates to: SVKPAEHASAVPWRSQSVWSAQW*LLWLEA
Trigger: TGCTTCCAACCACAACAACCACCACTGTGCTGACCA...AACACTCTGGGATCTCCAGGGAACAGCACTGGCGTGCTCTGCTGGCTTCACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp CCCTGTGGCCTCTTGACACACTGGGGCAGCGGGCTTGGAACACTGTCTTTCTTTCTTTCCACTTGGAAATaGTCCAGCGCATCAGTCAGG +
Preference number: 4 (lower is better)
Translates to: PCGLLTHWGSGLGTLSFFLSTWK*SSASVR
Trigger: CCTGACTGATGCGCTGGACCATTTCCAAGTGGAAAG...AAAGAAAGACAGTGTTCCAAGCCCGCTGCCCCAGTGTGTCAAGAGGCCACAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp CCCTGTGGCCTCTTGACACACTGGGGCAGCGGGCTTGGAACACTGTCTTTCTTTTCCAGGCTTTCCACTTaGAAATGGTCCAGCGCATCA +
Preference number: 4 (lower is better)
Translates to: PCGLLTHWGSGLGTLSFFSRLST*KWSSAS
Trigger: TGATGCGCTGGACCATTTCCAAGTGGAAAGCCTGGA...AAAGAAAGACAGTGTTCCAAGCCCGCTGCCCCAGTGTGTCAAGAGGCCACAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp TTTTGCCCAGAATCCCTAGCGCAGGTTAGTCACACAGGCTGGAAGGATGAACTTCGGCTCACTCCGCTGTaGTTCTCTGCGGTAACCAGC +
Preference number: 4 (lower is better)
Translates to: FCPESLAQVSHTGWKDELRLTPL*FSAVTS
Trigger: GCTGGTTACCGCAGAGAACCACAGCGGAGTGAGCCG...AAGTTCATCCTTCCAGCCTGTGTGACTAACCTGCGCTAGGGATTCTGGGCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp GAAGAAGAGAGGAGCAAAGAGCATTCTGTGAAGCCAGCAGAGCACGCCAGTGCTTGTGTCCAGAGAAGGTaGGGGACTTTGCTCCAAACG +
Preference number: 4 (lower is better)
Translates to: EEERSKEHSVKPAEHASACVQRR*GTLLQT
Trigger: CGTTTGGAGCAAAGTCCCTCACCTTCTCTGGACACA...AGCACTGGCGTGCTCTGCTGGCTTCACAGAATGCTCTTTGCTCCTCTCTTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp AGAAGAGAGGAGCAAAGAGCATTCTGTGAAGCCAGCAGAGCACGCCAGTGCTGTTGTGTCCAGAGAAGGTaGGGGACTTTGCTCCAAACG +
Preference number: 4 (lower is better)
Translates to: RREEQRAFCEASRARQCCCVQRR*GTLLQT
Trigger: CGTTTGGAGCAAAGTCCCTCACCTTCTCTGGACACA...ACAGCACTGGCGTGCTCTGCTGGCTTCACAGAATGCTCTTTGCTCCTCTCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp TGTGAAGCCAGCAGAGCACGCCAGTGCTGTTCCCTGGAGATCCCAGAGTGTTCATCAGGGGATCCTGCTTaGTCATACTCATTTTGGTCC +
Preference number: 4 (lower is better)
Translates to: CEASRARQCCSLEIPECSSGDPA*SYSFWS
Trigger: GGACCAAAATGAGTATGATCAAGCAGGATCCCCTGA...TGAACACTCTGGGATCTCCAGGGAACAGCACTGGCGTGCTCTGCTGGCTTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp GGGTTGATGTCTCTGGAATGTGTGATTACAAACGATCAAAGTGCAGAGGCGAAGCGGGTCTGTTGGATCTaGGCAGTGGCCTCAGCTCGC +
Preference number: 4 (lower is better)
Translates to: GLMSLECVITNDQSAEAKRVCWI*AVASAR
Trigger: GCGAGCTGAGGCCACTGCTCAGATCCAACAGACCCG...CTTCGCCTCTGCACTTTGATCGTTTGTAATCACACATTCCAGAGACATCAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp GGGTTGATGTCTCTGGAATGTGTGATTACAAACGATCAAAGTGCAGAGGCGAAGGCGAAGGAGCCCTGGTaGGGACTTTCGAGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: GLMSLECVITNDQSAEAKAKEPW*GLSRLR
Trigger: CCTCAGCCTCGAAAGTCCTCACCAGGGCTCCTTCGC...CTTCGCCTCTGCACTTTGATCGTTTGTAATCACACATTCCAGAGACATCAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp GCCTGGAGAGTCTGGAAATCACACTGGATCCACTGCAGGGTTGATGTCTCTGGAGTGAAGACTGATTGCTaGGATTCGGGTGGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: AWRVWKSHWIHCRVDVSGVKTDC*DSGGRG
Trigger: TCCTCTGCCACCCGAATCTCAGCAATCAGTCTTCAC...TCCAGAGACATCAACCCTGCAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp TGTGAAGCCAGCAGAGCACGCCAGTGCTGTTCCCTGGAGATCCCAGAGTGTTCAAGTATGTGGTGGTTTTaGTCACCTCCAAGCCCACTA +
Preference number: 4 (lower is better)
Translates to: CEASRARQCCSLEIPECSSMWWF*SPPSPL
Trigger: TAGTGGGCTTGGAGGTGATCAAAACCACCACATACT...TGAACACTCTGGGATCTCCAGGGAACAGCACTGGCGTGCTCTGCTGGCTTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp CAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCACTGGTCAGTCTCCAGGCCTaGGAAGTCATCTTCCTCGGG +
Preference number: 4 (lower is better)
Translates to: QSVQVLCLESLEITLDPLVSLQA*EVIFLG
Trigger: CCCGAGGAAGATGACTTCTCAGGCCTGGAGACTGAC...CAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp CTCTTGACACACTGGGGCAGCGGGCTTGGAACACTGTCTTTCTTTTGCCCAGAAATGAGACTGAAGGACTaGCAGGCCCATAGCCATGAG +
Preference number: 4 (lower is better)
Translates to: LLTHWGSGLGTLSFFCPEMRLKD*QAHSHE
Trigger: CTCATGGCTATGGGCCTGTCAGTCCTTCAGTCTCAT...TTCTGGGCAAAAGAAAGACAGTGTTCCAAGCCCGCTGCCCCAGTGTGTCAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp CCCTGTGGCCTCTTGACACACTGGGGCAGCGGGCTTGGAACACTGTCTTTCTTTATGGTCCTGGACCCTTaGTGGGAAAACCATCTATCT +
Preference number: 4 (lower is better)
Translates to: PCGLLTHWGSGLGTLSFFMVLDP*WENHLS
Trigger: AGATAGATGGTTTTCCCATCAAGGGTCCAGGACCAT...AAAGAAAGACAGTGTTCCAAGCCCGCTGCCCCAGTGTGTCAAGAGGCCACAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000239425.2
CDS-3UTR GCA 90 bp TCTGTGAAGCCAGCAGAGCACGCCAGTGCTGTTCCCTGGAGATCCCAGAGTGTTGTTTCTCAGGTTTCCTaGTGCTGTCTCTCCCATTTG +
Preference number: 4 (lower is better)
Translates to: SVKPAEHASAVPWRSQSVVSQVS*CCLSHL
Trigger: CAAATGGGAGAGACAGCAGCAGGAAACCTGAGAAAC...AACACTCTGGGATCTCCAGGGAACAGCACTGGCGTGCTCTGCTGGCTTCACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR GCA 90 bp CAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCACTGCACTGGCCACAGGTTTaGCATGTCTCCCCTGCCCAA +
Preference number: 4 (lower is better)
Translates to: QSVQVLCLESLEITLDPLHWPQV*HVSPAQ
Trigger: TTGGGCAGGGGAGACATGGCAAACCTGTGGCCAGTG...CAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp GCCTGGAGAGTCTGGAAATCACACTGGATCCACTGCAGGGTTGATGTCTCTGGATTCATACACGGTGTCTaGGATCAGGCTGTCCACCAG +
Preference number: 4 (lower is better)
Translates to: AWRVWKSHWIHCRVDVSGFIHGV*DQAVHQ
Trigger: CTGGTGGACAGCCTGATCCCAGACACCGTGTATGAA...TCCAGAGACATCAACCCTGCAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp CAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCACTGGGGCTTGCCACTGACTaGCCAGACTCTCAGGTTCTC +
Preference number: 4 (lower is better)
Translates to: QSVQVLCLESLEITLDPLGLATD*PDSQVL
Trigger: GAGAACCTGAGAGTCTGGCCAGTCAGTGGCAAGCCC...CAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp CTCTTGACACACTGGGGCAGCGGGCTTGGAACACTGTCTTTCTTTTGCCCAGAAAGGAAGCTGCAACTTTaGGAGCTGGGGAAGAAGGCT +
Preference number: 4 (lower is better)
Translates to: LLTHWGSGLGTLSFFCPERKLQL*ELGKKA
Trigger: AGCCTTCTTCCCCAGCTCCCAAAGTTGCAGCTTCCT...TTCTGGGCAAAAGAAAGACAGTGTTCCAAGCCCGCTGCCCCAGTGTGTCAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp TTTTGCCCAGAATCCCTAGCGCAGGTTAGTCACACAGGCTGGAAGGATGAACTTGTTGGATCTGAGCAGTaGCCTCAGCTCGCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: FCPESLAQVSHTGWKDELVGSEQ*PQLAFW
Trigger: CCAGAAGGCGAGCTGAGGCCACTGCTCAGATCCAAC...AAGTTCATCCTTCCAGCCTGTGTGACTAACCTGCGCTAGGGATTCTGGGCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp TCTGGAAATCACACTGGATCCACTGCAGGGTTGATGTCTCTGGAATGTGTGATTCCTTCCGGTACAAGCTaGCCCCTCTCTGGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: SGNHTGSTAGLMSLECVIPSGTS*PLSGSL
Trigger: GAGGCTCCCAGAGAGGGGCCAGCTTGTACCGGAAGG...AATCACACATTCCAGAGACATCAACCCTGCAGTGGATCCAGTGTGATTTCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp GTTCAGACCAAGAAATGTGGCCAAATTCTGACTGAAGAGGCCCAAATGCCAGGTCTAGCAGGGGACAGCTaGCGGCTGGTGGATGATGGA +
Preference number: 4 (lower is better)
Translates to: VQTKKCGQILTEEAQMPGLAGDS*RLVDDG
Trigger: TCCATCATCCACCAGCCGCCAGCTGTCCCCTGCTAG...ACCTGGCATTTGGGCCTCTTCAGTCAGAATTTGGCCACATTTCTTGGTCTGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp CAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCACTGTTCTTCTGGGAACAGTaGACCCAGGGGAGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: QSVQVLCLESLEITLDPLFFWEQ*TQGRAV
Trigger: CACAGCCCTCCCCTGGGTCCACTGTTCCCAGAAGAA...CAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp TCTGTGAAGCCAGCAGAGCACGCCAGTGCTGTTCCCTGGAGATCCCAGAGTGTTGAGCAAGAGACAACTTaGGCTGGGAAAGTGACCTAT +
Preference number: 4 (lower is better)
Translates to: SVKPAEHASAVPWRSQSVEQETT*AGKVTY
Trigger: ATAGGTCACTTTCCCAGCCCAAGTTGTCTCTTGCTC...AACACTCTGGGATCTCCAGGGAACAGCACTGGCGTGCTCTGCTGGCTTCACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp TCTGTGAAGCCAGCAGAGCACGCCAGTGCTGTTCCCTGGAGATCCCAGAGTGTTGTACAAGTTGCCCAATaGCAGCCTTGTCTCTGTCAA +
Preference number: 4 (lower is better)
Translates to: SVKPAEHASAVPWRSQSVVQVAQ*QPCLCQ
Trigger: TTGACAGAGACAAGGCTGCCATTGGGCAACTTGTAC...AACACTCTGGGATCTCCAGGGAACAGCACTGGCGTGCTCTGCTGGCTTCACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp GCCTGGAGAGTCTGGAAATCACACTGGATCCACTGCAGGGTTGATGTCTCTGGAACAGGGTTTCGAGGCTaGTACCAGGTAGGTGGATGT +
Preference number: 4 (lower is better)
Translates to: AWRVWKSHWIHCRVDVSGTGFRG*YQVGGC
Trigger: ACATCCACCTACCTGGTACCAGCCTCGAAACCCTGT...TCCAGAGACATCAACCCTGCAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp AGAAGAGAGGAGCAAAGAGCATTCTGTGAAGCCAGCAGAGCACGCCAGTGCTGTGTCAAATTCTTCCTCTaGGAAGGAGCTGACCGTGCC +
Preference number: 4 (lower is better)
Translates to: RREEQRAFCEASRARQCCVKFFL*EGADRA
Trigger: GGCACGGTCAGCTCCTTCCCAGAGGAAGAATTTGAC...ACAGCACTGGCGTGCTCTGCTGGCTTCACAGAATGCTCTTTGCTCCTCTCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp TCTGTGAAGCCAGCAGAGCACGCCAGTGCTGTTCCCTGGAGATCCCAGAGTGTTCACAGTGTACTGTCTTaGTGCAACAACTCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: SVKPAEHASAVPWRSQSVHSVLS*CNNSLL
Trigger: CAGAAGAGAGTTGTTGCATCAAGACAGTACACTGTG...AACACTCTGGGATCTCCAGGGAACAGCACTGGCGTGCTCTGCTGGCTTCACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp CAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCACTGGATGATGGAGGTGTTTaGGGAGCACCCTCATCCGTG +
Preference number: 4 (lower is better)
Translates to: QSVQVLCLESLEITLDPLDDGGV*GAPSSV
Trigger: CACGGATGAGGGTGCTCCTCAAACACCTCCATCATC...CAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp TCCCAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCAAGAACTAGAGAGCTCTaGGCTGCGACCTGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: SQSVQVLCLESLEITLDPRTREL*AATWCH
Trigger: ATGGCACCAGGTCGCAGCTCAGAGCTCTCTAGTTCT...TGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp CAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCACTGTGGGAGCCCATCTGCTaGGGTTTGAGAATGGATGGG +
Preference number: 4 (lower is better)
Translates to: QSVQVLCLESLEITLDPLWEPIC*GLRMDG
Trigger: CCCATCCATTCTCAAACCTCAGCAGATGGGCTCCCA...CAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp AGATCCCAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATGTCAGTCTCCAGGCCTaGGAAGTCATCTTCCTCGGG +
Preference number: 4 (lower is better)
Translates to: RSQSVQVLCLESLEITLDVSLQA*EVIFLG
Trigger: CCCGAGGAAGATGACTTCTCAGGCCTGGAGACTGAC...ATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTGGGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp GCCTGGAGAGTCTGGAAATCACACTGGATCCACTGCAGGGTTGATGTCTCTGGATGTTCCAGTCCACAATaGCAAAGGAGTGGCAGCCTT +
Preference number: 4 (lower is better)
Translates to: AWRVWKSHWIHCRVDVSGCSSPQ*QRSGSL
Trigger: AAGGCTGCCACTCCTTTGTCATTGTGGACTGGAACA...TCCAGAGACATCAACCCTGCAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp CCAGAATCCCTAGCGCAGGTTAGTCACACAGGCTGGAAGGATGAACTTGCAGCATGTTCCAGTCCACAATaGCAAAGGAGTGGCAGCCTT +
Preference number: 4 (lower is better)
Translates to: PESLAQVSHTGWKDELAACSSPQ*QRSGSL
Trigger: AAGGCTGCCACTCCTTTGTCATTGTGGACTGGAACA...TGCTGCAAGTTCATCCTTCCAGCCTGTGTGACTAACCTGCGCTAGGGATTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp GCCTGGAGAGTCTGGAAATCACACTGGATCCACTGCAGGGTTGATGTCTCTGGAGTCACTGACGAGGTCTaGGTTGACCATTTATTCCGG +
Preference number: 4 (lower is better)
Translates to: AWRVWKSHWIHCRVDVSGVTDEV*VDHLFR
Trigger: CCGGAATAAATGGTCAACTCAGACCTCGTCAGTGAC...TCCAGAGACATCAACCCTGCAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp GCCTGGAGAGTCTGGAAATCACACTGGATCCACTGCAGGGTTGATGTCTCTGGAAGCCAGGATCATGCTTaGAAGCGAATGGGATCCAGA +
Preference number: 4 (lower is better)
Translates to: AWRVWKSHWIHCRVDVSGSQDHA*KRMGSR
Trigger: TCTGGATCCCATTCGCTTTCAAGCATGATCCTGGCT...TCCAGAGACATCAACCCTGCAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR GCA 90 bp GAAGAAGAGAGGAGCAAAGAGCATTCTGTGAAGCCAGCAGAGCACGCCAGTGCTTCATCCTCTTCTGCATaGTTGCGCTTTGTGAGGGCA +
Preference number: 4 (lower is better)
Translates to: EEERSKEHSVKPAEHASASSSSA*LRFVRA
Trigger: TGCCCTCACAAAGCGCAAGCATGCAGAAGAGGATGA...AGCACTGGCGTGCTCTGCTGGCTTCACAGAATGCTCTTTGCTCCTCTCTTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR GCA 90 bp AGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCACTGCTCTCAGGTTCTCAGGTaGAGTGGTGGGAGCCGATTC +
Preference number: 4 (lower is better)
Translates to: RVFRFCAWRVWKSHWIHCSQVLR*SGGSRF
Trigger: GAATCGGCTCCCACCACTGCACCTGAGAACCTGAGA...GCAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp CACTGGATCCACTGCAGGGTTGATGTCTCTGGAATGTGTGATTACAAACGATCAGCTTGTAATCCCACCTaGCCGACTCCCCCTTCTCGC +
Preference number: 4 (lower is better)
Translates to: HWIHCRVDVSGMCDYKRSACNPT*PTPPSR
Trigger: GCGAGAAGGGGGAGTCGGCCAGGTGGGATTACAAGC...TGATCGTTTGTAATCACACATTCCAGAGACATCAACCCTGCAGTGGATCCAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp TCTGGAAATCACACTGGATCCACTGCAGGGTTGATGTCTCTGGAATGTGTGATTGGTTCTCAGGTGCAGTaGTGGGAGCCGATTCTGGCG +
Preference number: 4 (lower is better)
Translates to: SGNHTGSTAGLMSLECVIGSQVQ*WEPILA
Trigger: CGCCAGAATCGGCTCCCACCACTGCACCTGAGAACC...AATCACACATTCCAGAGACATCAACCCTGCAGTGGATCCAGTGTGATTTCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp AGATCCCAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATGCTGTCTCTCCCATTTaGCTGGGCACTGGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: RSQSVQVLCLESLEITLDAVSPI*LGTGLS
Trigger: ACTGAGGCCAGTGCCCAGCCAAATGGGAGAGACAGC...ATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTGGGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp CAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCACTGTGCAACTTTGGGAGCTaGGGAAGAAGGCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: QSVQVLCLESLEITLDPLCNFGS*GRRLLQ
Trigger: CTGCAGCAGCCTTCTTCCCCAGCTCCCAAAGTTGCA...CAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp CAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCACTGCGGGAACTAGAGGCATaGACATCCTGGCGATCCCTA +
Preference number: 4 (lower is better)
Translates to: QSVQVLCLESLEITLDPLRELEA*TSWRSL
Trigger: TAGGGATCGCCAGGATGTCCATGCCTCTAGTTCCCG...CAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp TTTTGCCCAGAATCCCTAGCGCAGGTTAGTCACACAGGCTGGAAGGATGAACTTCGGGAACTAGAGGCATaGACATCCTGGCGATCCCTA +
Preference number: 4 (lower is better)
Translates to: FCPESLAQVSHTGWKDELRELEA*TSWRSL
Trigger: TAGGGATCGCCAGGATGTCCATGCCTCTAGTTCCCG...AAGTTCATCCTTCCAGCCTGTGTGACTAACCTGCGCTAGGGATTCTGGGCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp GTTCAGACCAAGAAATGTGGCCAAATTCTGACTGAAGAGGCCCAAATGCCAGGTAAGCTGGCCCCTCTCTaGGAGCCTCTTCTCAGAGTG +
Preference number: 4 (lower is better)
Translates to: VQTKKCGQILTEEAQMPGKLAPL*EPLLRV
Trigger: CACTCTGAGAAGAGGCTCCCAGAGAGGGGCCAGCTT...ACCTGGCATTTGGGCCTCTTCAGTCAGAATTTGGCCACATTTCTTGGTCTGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp CCAGAATCCCTAGCGCAGGTTAGTCACACAGGCTGGAAGGATGAACTTGCAGCACCGCAAAGACAGCATTaGTGTCGTGGAAGAGTAGGT +
Preference number: 4 (lower is better)
Translates to: PESLAQVSHTGWKDELAAPQRQH*CRGRVG
Trigger: ACCTACTCTTCCACGACACCAATGCTGTCTTTGCGG...TGCTGCAAGTTCATCCTTCCAGCCTGTGTGACTAACCTGCGCTAGGGATTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp AGATCCCAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATTTGCCAGCTTCATCCTaGTGTTCCAGGGTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: RSQSVQVLCLESLEITLDLPASS*CSRVPG
Trigger: CCCTGGGACCCTGGAACACCAGGATGAAGCTGGCAA...ATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTGGGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp GCCTGGAGAGTCTGGAAATCACACTGGATCCACTGCAGGGTTGATGTCTCTGGACTTTCCACTTGGAAATaGTCCAGCGCATCAGTCAGG +
Preference number: 4 (lower is better)
Translates to: AWRVWKSHWIHCRVDVSGLSTWK*SSASVR
Trigger: CCTGACTGATGCGCTGGACCATTTCCAAGTGGAAAG...TCCAGAGACATCAACCCTGCAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp CCAGAATCCCTAGCGCAGGTTAGTCACACAGGCTGGAAGGATGAACTTGCAGCACCACATCTCCAGGGATaGCTTTGTTCCAGTCCACAA +
Preference number: 4 (lower is better)
Translates to: PESLAQVSHTGWKDELAAPHLQG*LCSSPQ
Trigger: TTGTGGACTGGAACAAAGCCATCCCTGGAGATGTGG...TGCTGCAAGTTCATCCTTCCAGCCTGTGTGACTAACCTGCGCTAGGGATTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp CTCTTGACACACTGGGGCAGCGGGCTTGGAACACTGTCTTTCTTTTGCCCAGAAGACGGTCTCATTAAATaGTCCTGGACCCTTGATGGG +
Preference number: 4 (lower is better)
Translates to: LLTHWGSGLGTLSFFCPEDGLIK*SWTLDG
Trigger: CCCATCAAGGGTCCAGGACCATTTAATGAGACCGTC...TTCTGGGCAAAAGAAAGACAGTGTTCCAAGCCCGCTGCCCCAGTGTGTCAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp TTTTGCCCAGAATCCCTAGCGCAGGTTAGTCACACAGGCTGGAAGGATGAACTTTTGCTCCAAACGGTTTaGGAGCCGGGGCGTATGAAA +
Preference number: 4 (lower is better)
Translates to: FCPESLAQVSHTGWKDELLLQTV*EPGRMK
Trigger: TTTCATACGCCCCGGCTCTCAAACCGTTTGGAGCAA...AAGTTCATCCTTCCAGCCTGTGTGACTAACCTGCGCTAGGGATTCTGGGCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp CAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCACTGCCCCCAGAGATTGGATaGCTGGAAGAGGAAGGTGTA +
Preference number: 4 (lower is better)
Translates to: QSVQVLCLESLEITLDPLPPEIG*LEEEGV
Trigger: TACACCTTCCTCTTCCAGTCATCCAATCTCTGGGGG...CAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp AGATCCCAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATGATGATGGAGGTGTTTaGGGAGCACCCTCATCCGTG +
Preference number: 4 (lower is better)
Translates to: RSQSVQVLCLESLEITLDDDGGV*GAPSSV
Trigger: CACGGATGAGGGTGCTCCTCAAACACCTCCATCATC...ATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTGGGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp AGATCCCAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATTGGGAGCCCATCTGCTaGGGTTTGAGAATGGATGGG +
Preference number: 4 (lower is better)
Translates to: RSQSVQVLCLESLEITLDWEPIC*GLRMDG
Trigger: CCCATCCATTCTCAAACCTCAGCAGATGGGCTCCCA...ATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTGGGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp GAAGAAGAGAGGAGCAAAGAGCATTCTGTGAAGCCAGCAGAGCACGCCAGTGCTCCTCTTCCTCCTCAGTaGAGACTGATTGCTGAGATT +
Preference number: 4 (lower is better)
Translates to: EEERSKEHSVKPAEHASAPLPPQ*RLIAEI
Trigger: AATCTCAGCAATCAGTCTTCACTGAGGAGGAAGAGG...AGCACTGGCGTGCTCTGCTGGCTTCACAGAATGCTCTTTGCTCCTCTCTTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp TGTGAAGCCAGCAGAGCACGCCAGTGCTGTTCCCTGGAGATCCCAGAGTGTTCAACCCACTTTGTTCCTTaGGGACCATTGATAATTCTC +
Preference number: 4 (lower is better)
Translates to: CEASRARQCCSLEIPECSTHFVP*GPLIIL
Trigger: GAGAATTATCAATGGTCCTCAAGGAACAAAGTGGGT...TGAACACTCTGGGATCTCCAGGGAACAGCACTGGCGTGCTCTGCTGGCTTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp AGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCACTGCATGAGACTGAAGGACTaGCAGGCCCATAGCCATGAG +
Preference number: 4 (lower is better)
Translates to: RVFRFCAWRVWKSHWIHCMRLKD*QAHSHE
Trigger: CTCATGGCTATGGGCCTGTCAGTCCTTCAGTCTCAT...GCAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp AGAAGAGAGGAGCAAAGAGCATTCTGTGAAGCCAGCAGAGCACGCCAGTGCTGTGAAAACCATCTATCTTaGTCCATTCACCTCCGGGTG +
Preference number: 4 (lower is better)
Translates to: RREEQRAFCEASRARQCCENHLS*SIHLRV
Trigger: CACCCGGAGGTGAATGGATCAAGATAGATGGTTTTC...ACAGCACTGGCGTGCTCTGCTGGCTTCACAGAATGCTCTTTGCTCCTCTCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239425.2
CDS-3UTR GCA 90 bp TCCCAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCAAGGACAGAGGGGATTTaGCTCCTGGATGTACATCCG +
Preference number: 4 (lower is better)
Translates to: SQSVQVLCLESLEITLDPRTEGI*LLDVHP
Trigger: CGGATGTACATCCAGGAGGCAAATCCCCTCTGTCCT...TGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR GCA 90 bp CACTGGATCCACTGCAGGGTTGATGTCTCTGGAATGTGTGATTACAAACGATCATACCTTGGCCAGGAGTaGGTGCTTGCGCTGGGACTT +
Preference number: 4 (lower is better)
Translates to: HWIHCRVDVSGMCDYKRSYLGQE*VLALGL
Trigger: AAGTCCCAGCGCAAGCACGCACTCCTGGCCAAGGTA...TGATCGTTTGTAATCACACATTCCAGAGACATCAACCCTGCAGTGGATCCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR GCA 90 bp CAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCACTGTCCGCTGTGGTTCTCTaGGGTAACCAGCACGAAGTA +
Preference number: 4 (lower is better)
Translates to: QSVQVLCLESLEITLDPLSAVVL*GNQHEV
Trigger: TACTTCGTGCTGGTTACCGCAGAGAACCACAGCGGA...CAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp CACTGGATCCACTGCAGGGTTGATGTCTCTGGAATGTGTGATTACAAACGATCAACCCCGAGATCTTCGTaGGCTCTTGGCTCCAGACAG +
Preference number: 4 (lower is better)
Translates to: HWIHCRVDVSGMCDYKRSTPRSS*ALGSRQ
Trigger: CTGTCTGGAGCCAAGAGCCCACGAAGATCTCGGGGT...TGATCGTTTGTAATCACACATTCCAGAGACATCAACCCTGCAGTGGATCCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp CACTGGATCCACTGCAGGGTTGATGTCTCTGGAATGTGTGATTACAAACGATCAGCTGTCTCTCCCATTTaGCTGGGCACTGGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: HWIHCRVDVSGMCDYKRSAVSPI*LGTGLS
Trigger: ACTGAGGCCAGTGCCCAGCCAAATGGGAGAGACAGC...TGATCGTTTGTAATCACACATTCCAGAGACATCAACCCTGCAGTGGATCCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp TCTGGAAATCACACTGGATCCACTGCAGGGTTGATGTCTCTGGAATGTGTGATTCCTCAGCTCGCCTTCTaGTGTCTCCTGCAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: SGNHTGSTAGLMSLECVIPQLAF*CLLQLC
Trigger: ACAGAGCTGCAGGAGACACCAGAAGGCGAGCTGAGG...AATCACACATTCCAGAGACATCAACCCTGCAGTGGATCCAGTGTGATTTCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp GGGTTGATGTCTCTGGAATGTGTGATTACAAACGATCAAAGTGCAGAGGCGAAGGTTGGATCTGAGCAGTaGCCTCAGCTCGCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: GLMSLECVITNDQSAEAKVGSEQ*PQLAFW
Trigger: CCAGAAGGCGAGCTGAGGCCACTGCTCAGATCCAAC...CTTCGCCTCTGCACTTTGATCGTTTGTAATCACACATTCCAGAGACATCAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp TTTTGCCCAGAATCCCTAGCGCAGGTTAGTCACACAGGCTGGAAGGATGAACTTCACAGTGGCTGGAAGTaGCTCTTCATCCTCACCATC +
Preference number: 4 (lower is better)
Translates to: FCPESLAQVSHTGWKDELHSGWK*LFILTI
Trigger: GATGGTGAGGATGAAGAGCCACTTCCAGCCACTGTG...AAGTTCATCCTTCCAGCCTGTGTGACTAACCTGCGCTAGGGATTCTGGGCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp TTTTGCCCAGAATCCCTAGCGCAGGTTAGTCACACAGGCTGGAAGGATGAACTTGTTGACCACAGTGGCTaGAAGTGGCTCTTCATCCTC +
Preference number: 4 (lower is better)
Translates to: FCPESLAQVSHTGWKDELVDHSG*KWLFIL
Trigger: GAGGATGAAGAGCCACTTCCAGCCACTGTGGTCAAC...AAGTTCATCCTTCCAGCCTGTGTGACTAACCTGCGCTAGGGATTCTGGGCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp CAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCACTGGTTGACCACAGTGGCTaGAAGTGGCTCTTCATCCTC +
Preference number: 4 (lower is better)
Translates to: QSVQVLCLESLEITLDPLVDHSG*KWLFIL
Trigger: GAGGATGAAGAGCCACTTCCAGCCACTGTGGTCAAC...CAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp TTTTGCCCAGAATCCCTAGCGCAGGTTAGTCACACAGGCTGGAAGGATGAACTTCCGCTCCAGCAGCTTTaGAGTTTTCTGGGATGGGTT +
Preference number: 4 (lower is better)
Translates to: FCPESLAQVSHTGWKDELPLQQL*SFLGWV
Trigger: AACCCATCCCAGAAAACTCCAAAGCTGCTGGAGCGG...AAGTTCATCCTTCCAGCCTGTGTGACTAACCTGCGCTAGGGATTCTGGGCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp AGATCCCAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATACAGCTGGCGGCTGGTaGATGATGGAGGTGTTTGAG +
Preference number: 4 (lower is better)
Translates to: RSQSVQVLCLESLEITLDTAGGW*MMEVFE
Trigger: CTCAAACACCTCCATCATCCACCAGCCGCCAGCTGT...ATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTGGGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp CACTGGATCCACTGCAGGGTTGATGTCTCTGGAATGTGTGATTACAAACGATCAGGGACAGCTGGCGGCTaGTGGATGATGGAGGTGTTT +
Preference number: 4 (lower is better)
Translates to: HWIHCRVDVSGMCDYKRSGTAGG*WMMEVF
Trigger: AAACACCTCCATCATCCACCAGCCGCCAGCTGTCCC...TGATCGTTTGTAATCACACATTCCAGAGACATCAACCCTGCAGTGGATCCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp GGGTTGATGTCTCTGGAATGTGTGATTACAAACGATCAAAGTGCAGAGGCGAAGTTCTTCTGGGAACAGTaGACCCAGGGGAGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: GLMSLECVITNDQSAEAKFFWEQ*TQGRAV
Trigger: CACAGCCCTCCCCTGGGTCCACTGTTCCCAGAAGAA...CTTCGCCTCTGCACTTTGATCGTTTGTAATCACACATTCCAGAGACATCAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp CAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCACTGGTTTATCCTGGGCACTaGCCACAGGTTTGCCATGTC +
Preference number: 4 (lower is better)
Translates to: QSVQVLCLESLEITLDPLVYPGH*PQVCHV
Trigger: GACATGGCAAACCTGTGGCCAGTGCCCAGGATAAAC...CAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp TTTTGCCCAGAATCCCTAGCGCAGGTTAGTCACACAGGCTGGAAGGATGAACTTGTTTATCCTGGGCACTaGCCACAGGTTTGCCATGTC +
Preference number: 4 (lower is better)
Translates to: FCPESLAQVSHTGWKDELVYPGH*PQVCHV
Trigger: GACATGGCAAACCTGTGGCCAGTGCCCAGGATAAAC...AAGTTCATCCTTCCAGCCTGTGTGACTAACCTGCGCTAGGGATTCTGGGCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp CACTGGATCCACTGCAGGGTTGATGTCTCTGGAATGTGTGATTACAAACGATCACTTGGCTTCAGTGGGTaGTCAACTGGGGGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: HWIHCRVDVSGMCDYKRSLGFSG*STGGPA
Trigger: AGCAGGACCCCCAGTTGACCACCCACTGAAGCCAAG...TGATCGTTTGTAATCACACATTCCAGAGACATCAACCCTGCAGTGGATCCAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000239425.2
3UTR CAA 72 bp AGTGCTGTTCCCTGGAGATCCCAGAGTGTTCAGGTTTaGTGCCTGGAGAGTCTGGAAATCACACTGGATCCA +
Preference number: 4 (lower is better)
Translates to: SAVPWRSQSVQV*CLESLEITLDP
Trigger: TGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTGGGATCTCCAGGGAACAGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp TTTTGCCCAGAATCCCTAGCGCAGGTTAGTCACACAGGCTGGAAGGATGAACTTTCTCCCATTTTAGAGTaGAGCTGGGTTTTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: FCPESLAQVSHTGWKDELSPILE*SWVFPG
Trigger: ACCCGGGAAAACCCAGCTTCACTCTAAAATGGGAGA...AAGTTCATCCTTCCAGCCTGTGTGACTAACCTGCGCTAGGGATTCTGGGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp AGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCACTGCTCTCCCATTTTAGAGTaGAGCTGGGTTTTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: RVFRFCAWRVWKSHWIHCSPILE*SWVFPG
Trigger: ACCCGGGAAAACCCAGCTTCACTCTAAAATGGGAGA...GCAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp CAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCACTGCTTGGGCTGGGAAAGTaGCCTATCTTTGCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: QSVQVLCLESLEITLDPLLGLGK*PIFALR
Trigger: TCTCAGAGCAAAGATAGGTCACTTTCCCAGCCCAAG...CAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp TTTTGCCCAGAATCCCTAGCGCAGGTTAGTCACACAGGCTGGAAGGATGAACTTCTTGGGCTGGGAAAGTaGCCTATCTTTGCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: FCPESLAQVSHTGWKDELLGLGK*PIFALR
Trigger: TCTCAGAGCAAAGATAGGTCACTTTCCCAGCCCAAG...AAGTTCATCCTTCCAGCCTGTGTGACTAACCTGCGCTAGGGATTCTGGGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp AGATCCCAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCTCCTCAGTGAAGACTaGTTGCTGAGATTCGGGTGG +
Preference number: 4 (lower is better)
Translates to: RSQSVQVLCLESLEITLDLLSED*LLRFGW
Trigger: CCACCCGAATCTCAGCAATCAGTCTTCACTGAGGAG...ATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTGGGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR GCA 90 bp CACTGGATCCACTGCAGGGTTGATGTCTCTGGAATGTGTGATTACAAACGATCATGGGAGTTCGTGGACTaGAGGGACACCACATACACC +
Preference number: 4 (lower is better)
Translates to: HWIHCRVDVSGMCDYKRSWEFVD*RDTTYT
Trigger: GGTGTATGTGGTGTCCCTGCAGTCCACGAACTCCCA...TGATCGTTTGTAATCACACATTCCAGAGACATCAACCCTGCAGTGGATCCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR GCA 90 bp AGATCCCAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCTTCTGGTGTCTCCTaGAGCTCTGTCAATATCCGC +
Preference number: 4 (lower is better)
Translates to: RSQSVQVLCLESLEITLDPSGVS*SSVNIR
Trigger: GCGGATATTGACAGAGCTGCAGGAGACACCAGAAGG...ATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTGGGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR GCA 90 bp AGATCCCAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATATCTGCTTGGATTTCTaGTGTGGGCAGGGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: RSQSVQVLCLESLEITLDICLDF*CGQGRA
Trigger: AGCCCTTCCCTGCCCACAGCAGAAATCCAAGCAGAT...ATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTGGGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR GCA 90 bp AGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCACTGCGGAGTTTGGGGAATCTaGTTGGATTTCTGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: RVFRFCAWRVWKSHWIHCGVWGI*LDFCCG
Trigger: CCCACAGCAGAAATCCAAGCAGATTCCCCAAACTCC...GCAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR GCA 90 bp AGATCCCAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATAGGACAGAGGGGATTTaGCTCCTGGATGTACATCCG +
Preference number: 4 (lower is better)
Translates to: RSQSVQVLCLESLEITLDRTEGI*LLDVHP
Trigger: CGGATGTACATCCAGGAGGCAAATCCCCTCTGTCCT...ATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTGGGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp GTTCAGACCAAGAAATGTGGCCAAATTCTGACTGAAGAGGCCCAAATGCCAGGTGGAAGCATCTTTGGGTaGGTCCCATGTGACCTTCAG +
Preference number: 4 (lower is better)
Translates to: VQTKKCGQILTEEAQMPGGSIFG*VPCDLQ
Trigger: CTGAAGGTCACATGGGACCCACCCAAAGATGCTTCC...ACCTGGCATTTGGGCCTCTTCAGTCAGAATTTGGCCACATTTCTTGGTCTGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp CAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCACTGGATTCTGGCGTTCTCTaGAAGATGGATGCACTCCAC +
Preference number: 4 (lower is better)
Translates to: QSVQVLCLESLEITLDPLDSGVL*KMDALH
Trigger: GTGGAGTGCATCCATCTTCCAGAGAACGCCAGAATC...CAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp GTTCAGACCAAGAAATGTGGCCAAATTCTGACTGAAGAGGCCCAAATGCCAGGTAGGAAGCTGCAACTTTaGGAGCTGGGGAAGAAGGCT +
Preference number: 4 (lower is better)
Translates to: VQTKKCGQILTEEAQMPGRKLQL*ELGKKA
Trigger: AGCCTTCTTCCCCAGCTCCCAAAGTTGCAGCTTCCT...ACCTGGCATTTGGGCCTCTTCAGTCAGAATTTGGCCACATTTCTTGGTCTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp CAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCACTGAAGTTAGCCTGGACCTaGCTGGATTCTTGGGAGATG +
Preference number: 4 (lower is better)
Translates to: QSVQVLCLESLEITLDPLKLAWT*LDSWEM
Trigger: CATCTCCCAAGAATCCAGCCAGGTCCAGGCTAACTT...CAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp GGGTTGATGTCTCTGGAATGTGTGATTACAAACGATCAAAGTGCAGAGGCGAAGTCGCTGGTGGAAGAATaGGACTGGCTCGATGCGGAT +
Preference number: 4 (lower is better)
Translates to: GLMSLECVITNDQSAEAKSLVEE*DWLDAD
Trigger: ATCCGCATCGAGCCAGTCCCATTCTTCCACCAGCGA...CTTCGCCTCTGCACTTTGATCGTTTGTAATCACACATTCCAGAGACATCAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp TTTTGCCCAGAATCCCTAGCGCAGGTTAGTCACACAGGCTGGAAGGATGAACTTTTTGGGGAATCTGCTTaGATTTCTGCTGTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: FCPESLAQVSHTGWKDELFGESA*ISAVGR
Trigger: CCTGCCCACAGCAGAAATCCAAGCAGATTCCCCAAA...AAGTTCATCCTTCCAGCCTGTGTGACTAACCTGCGCTAGGGATTCTGGGCAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp AGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCACTGCTGGAGTTTTCTGGGATaGGTTCCTTCCGGTACAAGC +
Preference number: 4 (lower is better)
Translates to: RVFRFCAWRVWKSHWIHCWSFLG*VPSGTS
Trigger: GCTTGTACCGGAAGGAACCCATCCCAGAAAACTCCA...GCAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp GTTCAGACCAAGAAATGTGGCCAAATTCTGACTGAAGAGGCCCAAATGCCAGGTCCGCTCCAGCAGCTTTaGAGTTTTCTGGGATGGGTT +
Preference number: 4 (lower is better)
Translates to: VQTKKCGQILTEEAQMPGPLQQL*SFLGWV
Trigger: AACCCATCCCAGAAAACTCCAAAGCTGCTGGAGCGG...ACCTGGCATTTGGGCCTCTTCAGTCAGAATTTGGCCACATTTCTTGGTCTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp GGGTTGATGTCTCTGGAATGTGTGATTACAAACGATCAAAGTGCAGAGGCGAAGGAAAGCCCTGAGCCTTaGAGGACAGAGGGGATTTGC +
Preference number: 4 (lower is better)
Translates to: GLMSLECVITNDQSAEAKESPEP*RTEGIC
Trigger: GCAAATCCCCTCTGTCCTCCAAGGCTCAGGGCTTTC...CTTCGCCTCTGCACTTTGATCGTTTGTAATCACACATTCCAGAGACATCAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp CAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCACTGTTGCTGAGATTCGGGTaGCAGAGGATGCTTGGAAGA +
Preference number: 4 (lower is better)
Translates to: QSVQVLCLESLEITLDPLLLRFG*QRMLGR
Trigger: TCTTCCAAGCATCCTCTGCCACCCGAATCTCAGCAA...CAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp AGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCACTGCTTGCTGAGATTCGGGTaGCAGAGGATGCTTGGAAGA +
Preference number: 4 (lower is better)
Translates to: RVFRFCAWRVWKSHWIHCLLRFG*QRMLGR
Trigger: TCTTCCAAGCATCCTCTGCCACCCGAATCTCAGCAA...GCAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp CAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCACTGAAGATGGGTTTATCCTaGGCACTGGCCACAGGTTTG +
Preference number: 4 (lower is better)
Translates to: QSVQVLCLESLEITLDPLKMGLS*ALATGL
Trigger: CAAACCTGTGGCCAGTGCCCAGGATAAACCCATCTT...CAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp TTTTGCCCAGAATCCCTAGCGCAGGTTAGTCACACAGGCTGGAAGGATGAACTTCAGTGGTGGTTGTTGTaGTTGGAAGCATGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: FCPESLAQVSHTGWKDELQWWLL*LEAWLW
Trigger: CCACAACCATGCTTCCAACCACAACAACCACCACTG...AAGTTCATCCTTCCAGCCTGTGTGACTAACCTGCGCTAGGGATTCTGGGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp TCCCAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCACAGTGGTGGTTGTTGTaGTTGGAAGCATGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: SQSVQVLCLESLEITLDPQWWLL*LEAWLW
Trigger: CCACAACCATGCTTCCAACCACAACAACCACCACTG...TGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp AGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCACTGCCCACATCTCCAGGGATaGCTTTGTTCCAGTCCACAA +
Preference number: 4 (lower is better)
Translates to: RVFRFCAWRVWKSHWIHCPHLQG*LCSSPQ
Trigger: TTGTGGACTGGAACAAAGCCATCCCTGGAGATGTGG...GCAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp CAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCACTGGCTTCAAGTTCTCAATaGGCAGATGGGTCACTGACG +
Preference number: 4 (lower is better)
Translates to: QSVQVLCLESLEITLDPLASSSQ*ADGSLT
Trigger: CGTCAGTGACCCATCTGCCCATTGAGAACTTGAAGC...CAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp AGGAGCAAAGAGCATTCTGTGAAGCCAGCAGAGCACGCCAGTGCTGTTCCCTGGGTAATACCTTGTGTTTaGCTTCAAGTTCTCAATGGG +
Preference number: 4 (lower is better)
Translates to: RSKEHSVKPAEHASAVPWVIPCV*LQVLNG
Trigger: CCCATTGAGAACTTGAAGCCAAACACAAGGTATTAC...CCAGGGAACAGCACTGGCGTGCTCTGCTGGCTTCACAGAATGCTCTTTGCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp TTTTGCCCAGAATCCCTAGCGCAGGTTAGTCACACAGGCTGGAAGGATGAACTTATGCTTGAAAGCGAATaGGATCCAGATGGGCTCACC +
Preference number: 4 (lower is better)
Translates to: FCPESLAQVSHTGWKDELMLESE*DPDGLT
Trigger: GGTGAGCCCATCTGGATCCCATTCGCTTTCAAGCAT...AAGTTCATCCTTCCAGCCTGTGTGACTAACCTGCGCTAGGGATTCTGGGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp TCCCAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCAATGCTTGAAAGCGAATaGGATCCAGATGGGCTCACC +
Preference number: 4 (lower is better)
Translates to: SQSVQVLCLESLEITLDPMLESE*DPDGLT
Trigger: GGTGAGCCCATCTGGATCCCATTCGCTTTCAAGCAT...TGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp TCCCAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCACAGTTTCACATGCCTTaGCTTCAGTGGGTGGTCAAC +
Preference number: 4 (lower is better)
Translates to: SQSVQVLCLESLEITLDPQFHMP*LQWVVN
Trigger: GTTGACCACCCACTGAAGCCAAGGCATGTGAAACTG...TGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp GGGTTGATGTCTCTGGAATGTGTGATTACAAACGATCAAAGTGCAGAGGCGAAGCCATTCACCTCCGGGTaGGCTCTCAGCTCTGTAAAC +
Preference number: 4 (lower is better)
Translates to: GLMSLECVITNDQSAEAKPFTSG*ALSSVN
Trigger: GTTTACAGAGCTGAGAGCCCACCCGGAGGTGAATGG...CTTCGCCTCTGCACTTTGATCGTTTGTAATCACACATTCCAGAGACATCAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp CCAGAATCCCTAGCGCAGGTTAGTCACACAGGCTGGAAGGATGAACTTGCAGCACTCATTAAATGGTCCTaGACCCTTGATGGGAAAACC +
Preference number: 4 (lower is better)
Translates to: PESLAQVSHTGWKDELAALIKWS*TLDGKT
Trigger: GGTTTTCCCATCAAGGGTCCAGGACCATTTAATGAG...TGCTGCAAGTTCATCCTTCCAGCCTGTGTGACTAACCTGCGCTAGGGATTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp CCCTGTGGCCTCTTGACACACTGGGGCAGCGGGCTTGGAACACTGTCTTTCTTTCTTTTTAATTTCATGTaGTCTCTCATCTCTGGTCAG +
Preference number: 4 (lower is better)
Translates to: PCGLLTHWGSGLGTLSFFLFNFM*SLISGQ
Trigger: CTGACCAGAGATGAGAGATCACATGAAATTAAAAAG...AAAGAAAGACAGTGTTCCAAGCCCGCTGCCCCAGTGTGTCAAGAGGCCACAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp AGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCACTGCGAGAGCCGGGGCGTATaGAAGAATGTATTCTTTCAC +
Preference number: 4 (lower is better)
Translates to: RVFRFCAWRVWKSHWIHCESRGV*KNVFFH
Trigger: GTGAAAGAATACATTCTTTCATACGCCCCGGCTCTC...GCAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp TCTGGAAATCACACTGGATCCACTGCAGGGTTGATGTCTCTGGAATGTGTGATTTTGTGGCCCGGATTTTaGACAGATAGCGTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: SGNHTGSTAGLMSLECVILWPGF*TDSVPQ
Trigger: CTGGGGAACGCTATCTGTTCAAAATCCGGGCCACAA...AATCACACATTCCAGAGACATCAACCCTGCAGTGGATCCAGTGTGATTTCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp AGATCCCAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCATCTGCTGAGGTTTaGGAATGGATGGGGTGGTAT +
Preference number: 4 (lower is better)
Translates to: RSQSVQVLCLESLEITLDPSAEV*EWMGWY
Trigger: ATACCACCCCATCCATTCTCAAACCTCAGCAGATGG...ATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTGGGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp CACTGGATCCACTGCAGGGTTGATGTCTCTGGAATGTGTGATTACAAACGATCACTCCTCAGTGAAGACTaGTTGCTGAGATTCGGGTGG +
Preference number: 4 (lower is better)
Translates to: HWIHCRVDVSGMCDYKRSLLSED*LLRFGW
Trigger: CCACCCGAATCTCAGCAATCAGTCTTCACTGAGGAG...TGATCGTTTGTAATCACACATTCCAGAGACATCAACCCTGCAGTGGATCCAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp CCAGAATCCCTAGCGCAGGTTAGTCACACAGGCTGGAAGGATGAACTTGCAGCAACCCACTTTGTTCCTTaGGGACCATTGATAATTCTC +
Preference number: 4 (lower is better)
Translates to: PESLAQVSHTGWKDELAATHFVP*GPLIIL
Trigger: GAGAATTATCAATGGTCCTCAAGGAACAAAGTGGGT...TGCTGCAAGTTCATCCTTCCAGCCTGTGTGACTAACCTGCGCTAGGGATTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR GCA 90 bp TTACAAACGATCAAAGTGCAGAGGCGAAGTGAAGTTTCAGCAAAACTGAATTGTGCGTGGCGCCTTCCATaGAACGGACAGCCTGTCGTC +
Preference number: 4 (lower is better)
Translates to: LQTIKVQRRSEVSAKLNCAWRLP*NGQPVV
Trigger: GACGACAGGCTGTCCGTTGCATGGAAGGCGCCACGC...ACAATTCAGTTTTGCTGAAACTTCACTTCGCCTCTGCACTTTGATCGTTTGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR GCA 90 bp GTTCAGACCAAGAAATGTGGCCAAATTCTGACTGAAGAGGCCCAAATGCCAGGTTCTCTGGAAGATGGATaGACTCCACTTGCCATCTCG +
Preference number: 4 (lower is better)
Translates to: VQTKKCGQILTEEAQMPGSLEDG*TPLAIS
Trigger: CGAGATGGCAAGTGGAGTGCATCCATCTTCCAGAGA...ACCTGGCATTTGGGCCTCTTCAGTCAGAATTTGGCCACATTTCTTGGTCTGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR GCA 90 bp TCTGGAAATCACACTGGATCCACTGCAGGGTTGATGTCTCTGGAATGTGTGATTGCTGGGGAAGAAGGCTaGTGCAGTTTCTCAGGTTTC +
Preference number: 4 (lower is better)
Translates to: SGNHTGSTAGLMSLECVIAGEEG*CSFSGF
Trigger: GAAACCTGAGAAACTGCAGCAGCCTTCTTCCCCAGC...AATCACACATTCCAGAGACATCAACCCTGCAGTGGATCCAGTGTGATTTCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR GCA 90 bp TCTGGAAATCACACTGGATCCACTGCAGGGTTGATGTCTCTGGAATGTGTGATTATCTGCTTGGATTTCTaGTGTGGGCAGGGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: SGNHTGSTAGLMSLECVIICLDF*CGQGRA
Trigger: AGCCCTTCCCTGCCCACAGCAGAAATCCAAGCAGAT...AATCACACATTCCAGAGACATCAACCCTGCAGTGGATCCAGTGTGATTTCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR GCA 90 bp GTTCAGACCAAGAAATGTGGCCAAATTCTGACTGAAGAGGCCCAAATGCCAGGTGGAGTTTGGGGAATCTaGTTGGATTTCTGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: VQTKKCGQILTEEAQMPGGVWGI*LDFCCG
Trigger: CCCACAGCAGAAATCCAAGCAGATTCCCCAAACTCC...ACCTGGCATTTGGGCCTCTTCAGTCAGAATTTGGCCACATTTCTTGGTCTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR GCA 90 bp TCCCAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCAGTCAAGGTTCCTGTCTaGATATTTGTTGTTCCGGGG +
Preference number: 4 (lower is better)
Translates to: SQSVQVLCLESLEITLDPVKVPV*IFVVPG
Trigger: CCCCGGAACAACAAATATGCAGACAGGAACCTTGAC...TGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp CACTGGATCCACTGCAGGGTTGATGTCTCTGGAATGTGTGATTACAAACGATCAACTCCACCGGTCTACTaGAAGCATCTTTGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: HWIHCRVDVSGMCDYKRSTPPVY*KHLWVG
Trigger: ACCCACCCAAAGATGCTTCCAGTAGACCGGTGGAGT...TGATCGTTTGTAATCACACATTCCAGAGACATCAACCCTGCAGTGGATCCAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp AGATCCCAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATGATTCTGGCGTTCTCTaGAAGATGGATGCACTCCAC +
Preference number: 4 (lower is better)
Translates to: RSQSVQVLCLESLEITLDDSGVL*KMDALH
Trigger: GTGGAGTGCATCCATCTTCCAGAGAACGCCAGAATC...ATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTGGGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp AGATCCCAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATTGGAGTTTTCTGGGATaGGTTCCTTCCGGTACAAGC +
Preference number: 4 (lower is better)
Translates to: RSQSVQVLCLESLEITLDWSFLG*VPSGTS
Trigger: GCTTGTACCGGAAGGAACCCATCCCAGAAAACTCCA...ATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTGGGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp AGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCACTGCGTACAAGTTGCCCAATaGCAGCCTTGTCTCTGTCAA +
Preference number: 4 (lower is better)
Translates to: RVFRFCAWRVWKSHWIHCVQVAQ*QPCLCQ
Trigger: TTGACAGAGACAAGGCTGCCATTGGGCAACTTGTAC...GCAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp AGGAGCAAAGAGCATTCTGTGAAGCCAGCAGAGCACGCCAGTGCTGTTCCCTGGAATTCTCTGTCCATTTaGTTTTCCAATACTACCAGG +
Preference number: 4 (lower is better)
Translates to: RSKEHSVKPAEHASAVPWNSLSI*FSNTTR
Trigger: CCTGGTAGTATTGGAAAACCAAATGGACAGAGAATT...CCAGGGAACAGCACTGGCGTGCTCTGCTGGCTTCACAGAATGCTCTTTGCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp TCTGGAAATCACACTGGATCCACTGCAGGGTTGATGTCTCTGGAATGTGTGATTGTCAAATTCTTCCTCTaGGAAGGAGCTGACCGTGCC +
Preference number: 4 (lower is better)
Translates to: SGNHTGSTAGLMSLECVIVKFFL*EGADRA
Trigger: GGCACGGTCAGCTCCTTCCCAGAGGAAGAATTTGAC...AATCACACATTCCAGAGACATCAACCCTGCAGTGGATCCAGTGTGATTTCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp CTCTTGACACACTGGGGCAGCGGGCTTGGAACACTGTCTTTCTTTTGCCCAGAAAGTAGCCTTGAATGTTaGGGAGGGCTTCTATATAAG +
Preference number: 4 (lower is better)
Translates to: LLTHWGSGLGTLSFFCPESSLEC*GGLLYK
Trigger: CTTATATAGAAGCCCTCCCCAACATTCAAGGCTACT...TTCTGGGCAAAAGAAAGACAGTGTTCCAAGCCCGCTGCCCCAGTGTGTCAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp TTACAAACGATCAAAGTGCAGAGGCGAAGTGAAGTTTCAGCAAAACTGAATTGTCGTCCCAGGATACGGTaGCAACTGTGGGCTTGCCAC +
Preference number: 4 (lower is better)
Translates to: LQTIKVQRRSEVSAKLNCRPRIR*QLWACH
Trigger: GTGGCAAGCCCACAGTTGTCACCGTATCCTGGGACG...ACAATTCAGTTTTGCTGAAACTTCACTTCGCCTCTGCACTTTGATCGTTTGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp ATTGAGAATTTACAAATAAGATCTGAGGCACTTAGCCCAGTGATGGATAGGTCTGTTGCCACTGTTCCCTaGCTGGGAGCCCATCTGCTG +
Preference number: 4 (lower is better)
Translates to: IENLQIRSEALSPVMDRSVATVP*LGAHLL
Trigger: CAGCAGATGGGCTCCCAGTCAGGGAACAGTGGCAAC...AGACCTATCCATCACTGGGCTAAGTGCCTCAGATCTTATTTGTAAATTCTCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR GCA 90 bp TCTGGAAATCACACTGGATCCACTGCAGGGTTGATGTCTCTGGAATGTGTGATTGAAGGTGAGGGACTTTaGTCCAAACGGTTTGAGAGC +
Preference number: 4 (lower is better)
Translates to: SGNHTGSTAGLMSLECVIEGEGL*SKRFES
Trigger: GCTCTCAAACCGTTTGGAGCAAAGTCCCTCACCTTC...AATCACACATTCCAGAGACATCAACCCTGCAGTGGATCCAGTGTGATTTCCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR GCA 90 bp AGATCCCAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATGTTTCTCAGGTTTCCTaGTGCTGTCTCTCCCATTTG +
Preference number: 4 (lower is better)
Translates to: RSQSVQVLCLESLEITLDVSQVS*CCLSHL
Trigger: CAAATGGGAGAGACAGCAGCAGGAAACCTGAGAAAC...ATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTGGGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR GCA 90 bp ATTGAGAATTTACAAATAAGATCTGAGGCACTTAGCCCAGTGATGGATAGGTCTGAGCTGACCGTGCCCTaGTCTGGGATGACCTTCGGT +
Preference number: 4 (lower is better)
Translates to: IENLQIRSEALSPVMDRSELTVP*SGMTFG
Trigger: ACCGAAGGTCATCCCAGAGCAGGGCACGGTCAGCTC...AGACCTATCCATCACTGGGCTAAGTGCCTCAGATCTTATTTGTAAATTCTCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp TCTGGAAATCACACTGGATCCACTGCAGGGTTGATGTCTCTGGAATGTGTGATTAAGTTAGCCTGGACCTaGCTGGATTCTTGGGAGATG +
Preference number: 4 (lower is better)
Translates to: SGNHTGSTAGLMSLECVIKLAWT*LDSWEM
Trigger: CATCTCCCAAGAATCCAGCCAGGTCCAGGCTAACTT...AATCACACATTCCAGAGACATCAACCCTGCAGTGGATCCAGTGTGATTTCCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp GTTCAGACCAAGAAATGTGGCCAAATTCTGACTGAAGAGGCCCAAATGCCAGGTGAAGAGCTGACAGTTTaGGAAGGCATACGGGAACTA +
Preference number: 4 (lower is better)
Translates to: VQTKKCGQILTEEAQMPGEELTV*EGIREL
Trigger: TAGTTCCCGTATGCCTTCCCAAACTGTCAGCTCTTC...ACCTGGCATTTGGGCCTCTTCAGTCAGAATTTGGCCACATTTCTTGGTCTGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp AGATCCCAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATGAAGAGCTGACAGTTTaGGAAGGCATACGGGAACTA +
Preference number: 4 (lower is better)
Translates to: RSQSVQVLCLESLEITLDEELTV*EGIREL
Trigger: TAGTTCCCGTATGCCTTCCCAAACTGTCAGCTCTTC...ATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTGGGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp TTACAAACGATCAAAGTGCAGAGGCGAAGTGAAGTTTCAGCAAAACTGAATTGTGAGCCAGGCCTAGTGTaGGATGCTGGCAGCGAAGGA +
Preference number: 4 (lower is better)
Translates to: LQTIKVQRRSEVSAKLNCEPGLV*DAGSEG
Trigger: TCCTTCGCTGCCAGCATCCCACACTAGGCCTGGCTC...ACAATTCAGTTTTGCTGAAACTTCACTTCGCCTCTGCACTTTGATCGTTTGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp TCTGGAAATCACACTGGATCCACTGCAGGGTTGATGTCTCTGGAATGTGTGATTTGGTGGTCAGCACAGTaGTGGTTGTTGTGGTTGGAA +
Preference number: 4 (lower is better)
Translates to: SGNHTGSTAGLMSLECVIWWSAQ*WLLWLE
Trigger: TTCCAACCACAACAACCACCACTGTGCTGACCACCA...AATCACACATTCCAGAGACATCAACCCTGCAGTGGATCCAGTGTGATTTCCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp CACTGGATCCACTGCAGGGTTGATGTCTCTGGAATGTGTGATTACAAACGATCACATAGTCCTCTTCTGTaGGTGGTGCAGTGTCAGTCT +
Preference number: 4 (lower is better)
Translates to: HWIHCRVDVSGMCDYKRSHSPLL*VVQCQS
Trigger: AGACTGACACTGCACCACCCACAGAAGAGGACTATG...TGATCGTTTGTAATCACACATTCCAGAGACATCAACCCTGCAGTGGATCCAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp CCAGAATCCCTAGCGCAGGTTAGTCACACAGGCTGGAAGGATGAACTTGCAGCAGTAATACCTTGTGTTTaGCTTCAAGTTCTCAATGGG +
Preference number: 4 (lower is better)
Translates to: PESLAQVSHTGWKDELAAVIPCV*LQVLNG
Trigger: CCCATTGAGAACTTGAAGCCAAACACAAGGTATTAC...TGCTGCAAGTTCATCCTTCCAGCCTGTGTGACTAACCTGCGCTAGGGATTCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp ATTGAGAATTTACAAATAAGATCTGAGGCACTTAGCCCAGTGATGGATAGGTCTCGAATGGGATCCAGATaGGCTCACCACCTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: IENLQIRSEALSPVMDRSRMGSR*AHHLVA
Trigger: GGCCACCAGGTGGTGAGCCCATCTGGATCCCATTCG...AGACCTATCCATCACTGGGCTAAGTGCCTCAGATCTTATTTGTAAATTCTCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp CTCTTGACACACTGGGGCAGCGGGCTTGGAACACTGTCTTTCTTTTGCCCAGAACTTTTTAATTTCATGTaGTCTCTCATCTCTGGTCAG +
Preference number: 4 (lower is better)
Translates to: LLTHWGSGLGTLSFFCPELFNFM*SLISGQ
Trigger: CTGACCAGAGATGAGAGATCACATGAAATTAAAAAG...TTCTGGGCAAAAGAAAGACAGTGTTCCAAGCCCGCTGCCCCAGTGTGTCAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp CACTGGATCCACTGCAGGGTTGATGTCTCTGGAATGTGTGATTACAAACGATCATCAGGGGATCCTGCTTaGTCATACTCATTTTGGTCC +
Preference number: 4 (lower is better)
Translates to: HWIHCRVDVSGMCDYKRSSGDPA*SYSFWS
Trigger: GGACCAAAATGAGTATGATCAAGCAGGATCCCCTGA...TGATCGTTTGTAATCACACATTCCAGAGACATCAACCCTGCAGTGGATCCAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp GGGTTGATGTCTCTGGAATGTGTGATTACAAACGATCAAAGTGCAGAGGCGAAGCCTCTTCCTCCTCAGTaGAGACTGATTGCTGAGATT +
Preference number: 4 (lower is better)
Translates to: GLMSLECVITNDQSAEAKPLPPQ*RLIAEI
Trigger: AATCTCAGCAATCAGTCTTCACTGAGGAGGAAGAGG...CTTCGCCTCTGCACTTTGATCGTTTGTAATCACACATTCCAGAGACATCAACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp TCTGGAAATCACACTGGATCCACTGCAGGGTTGATGTCTCTGGAATGTGTGATTAGTATGTGGTGGTTTTaGTCACCTCCAAGCCCACTA +
Preference number: 4 (lower is better)
Translates to: SGNHTGSTAGLMSLECVISMWWF*SPPSPL
Trigger: TAGTGGGCTTGGAGGTGATCAAAACCACCACATACT...AATCACACATTCCAGAGACATCAACCCTGCAGTGGATCCAGTGTGATTTCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR GCA 90 bp GTTCAGACCAAGAAATGTGGCCAAATTCTGACTGAAGAGGCCCAAATGCCAGGTAGGGTCAGGGGATCCTaGTTGATCATACTCATTTTG +
Preference number: 4 (lower is better)
Translates to: VQTKKCGQILTEEAQMPGRVRGS*LIILIL
Trigger: CAAAATGAGTATGATCAAGCAGGATCCCCTGACCCT...ACCTGGCATTTGGGCCTCTTCAGTCAGAATTTGGCCACATTTCTTGGTCTGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp TCCCAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCAGTGATCTCTCATCTCTaGTCAGTGGGACATAATTCA +
Preference number: 4 (lower is better)
Translates to: SQSVQVLCLESLEITLDPVISHL*SVGHNS
Trigger: TGAATTATGTCCCACTGACCAGAGATGAGAGATCAC...TGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp CAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCACTGAGTAGAACTGGTTGTTaGTATAGCGACAATGAAGGC +
Preference number: 4 (lower is better)
Translates to: QSVQVLCLESLEITLDPLSRTGC*YSDNEG
Trigger: GCCTTCATTGTCGCTATACCAACAACCAGTTCTACT...CAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp TCTGGAAATCACACTGGATCCACTGCAGGGTTGATGTCTCTGGAATGTGTGATTGAGCAAGAGACAACTTaGGCTGGGAAAGTGACCTAT +
Preference number: 4 (lower is better)
Translates to: SGNHTGSTAGLMSLECVIEQETT*AGKVTY
Trigger: ATAGGTCACTTTCCCAGCCCAAGTTGTCTCTTGCTC...AATCACACATTCCAGAGACATCAACCCTGCAGTGGATCCAGTGTGATTTCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp TTACAAACGATCAAAGTGCAGAGGCGAAGTGAAGTTTCAGCAAAACTGAATTGTAGAACTAGAGAGCTCTaGGCTGCGACCTGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: LQTIKVQRRSEVSAKLNCRTREL*AATWCH
Trigger: ATGGCACCAGGTCGCAGCTCAGAGCTCTCTAGTTCT...ACAATTCAGTTTTGCTGAAACTTCACTTCGCCTCTGCACTTTGATCGTTTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR GCA 90 bp TTACAAACGATCAAAGTGCAGAGGCGAAGTGAAGTTTCAGCAAAACTGAATTGTTCTCAGGTTCTCAGGTaGAGTGGTGGGAGCCGATTC +
Preference number: 4 (lower is better)
Translates to: LQTIKVQRRSEVSAKLNCSQVLR*SGGSRF
Trigger: GAATCGGCTCCCACCACTGCACCTGAGAACCTGAGA...ACAATTCAGTTTTGCTGAAACTTCACTTCGCCTCTGCACTTTGATCGTTTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR GCA 90 bp CTCTTGACACACTGGGGCAGCGGGCTTGGAACACTGTCTTTCTTTTGCCCAGAAACAGAGAGTCTTCCTTaGCTTTTAAAATTCCTTCAT +
Preference number: 4 (lower is better)
Translates to: LLTHWGSGLGTLSFFCPETESLP*LLKFLH
Trigger: ATGAAGGAATTTTAAAAGGCAAGGAAGACTCTCTGT...TTCTGGGCAAAAGAAAGACAGTGTTCCAAGCCCGCTGCCCCAGTGTGTCAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp ATTGAGAATTTACAAATAAGATCTGAGGCACTTAGCCCAGTGATGGATAGGTCTACAGCTGGCGGCTGGTaGATGATGGAGGTGTTTGAG +
Preference number: 4 (lower is better)
Translates to: IENLQIRSEALSPVMDRSTAGGW*MMEVFE
Trigger: CTCAAACACCTCCATCATCCACCAGCCGCCAGCTGT...AGACCTATCCATCACTGGGCTAAGTGCCTCAGATCTTATTTGTAAATTCTCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
3UTR CAA 72 bp GGAGAGTCTGGAAATCACACTGGATCCACTGCAGGGTaGATGTCTCTGGAATGTGTGATTACAAACGATCAA +
Preference number: 4 (lower is better)
Translates to: GESGNHTGSTAG*MSLECVITNDQ
Trigger: TTGATCGTTTGTAATCACACATTCCAGAGACATCAACCCTGCAGTGGATCCAGTGTGATTTCCAGACTCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR GCA 90 bp ATTGAGAATTTACAAATAAGATCTGAGGCACTTAGCCCAGTGATGGATAGGTCTGGGGAAGAAGGCTGCTaGAGTTTCTCAGGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: IENLQIRSEALSPVMDRSGEEGC*SFSGFL
Trigger: CAGGAAACCTGAGAAACTGCAGCAGCCTTCTTCCCC...AGACCTATCCATCACTGGGCTAAGTGCCTCAGATCTTATTTGTAAATTCTCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR GCA 90 bp TTACAAACGATCAAAGTGCAGAGGCGAAGTGAAGTTTCAGCAAAACTGAATTGTGACAGCAGTTTCACATaGCTTGGCTTCAGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: LQTIKVQRRSEVSAKLNCDSSFT*LGFSGW
Trigger: CCACCCACTGAAGCCAAGGCATGTGAAACTGCTGTC...ACAATTCAGTTTTGCTGAAACTTCACTTCGCCTCTGCACTTTGATCGTTTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp TTACAAACGATCAAAGTGCAGAGGCGAAGTGAAGTTTCAGCAAAACTGAATTGTACTCCACCGGTCTACTaGAAGCATCTTTGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: LQTIKVQRRSEVSAKLNCTPPVY*KHLWVG
Trigger: ACCCACCCAAAGATGCTTCCAGTAGACCGGTGGAGT...ACAATTCAGTTTTGCTGAAACTTCACTTCGCCTCTGCACTTTGATCGTTTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp GGGTTGATGTCTCTGGAATGTGTGATTACAAACGATCAAAGTGCAGAGGCGAAGGTGATCTCTCATCTCTaGTCAGTGGGACATAATTCA +
Preference number: 4 (lower is better)
Translates to: GLMSLECVITNDQSAEAKVISHL*SVGHNS
Trigger: TGAATTATGTCCCACTGACCAGAGATGAGAGATCAC...CTTCGCCTCTGCACTTTGATCGTTTGTAATCACACATTCCAGAGACATCAACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp ATTGAGAATTTACAAATAAGATCTGAGGCACTTAGCCCAGTGATGGATAGGTCTGGAGCACGGGGCTGTTaGGTCTTTACTGAGGTATGT +
Preference number: 4 (lower is better)
Translates to: IENLQIRSEALSPVMDRSGARGC*VFTEVC
Trigger: ACATACCTCAGTAAAGACCCAACAGCCCCGTGCTCC...AGACCTATCCATCACTGGGCTAAGTGCCTCAGATCTTATTTGTAAATTCTCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp GGGTTGATGTCTCTGGAATGTGTGATTACAAACGATCAAAGTGCAGAGGCGAAGAGTAGCCTTGAATGTTaGGGAGGGCTTCTATATAAG +
Preference number: 4 (lower is better)
Translates to: GLMSLECVITNDQSAEAKSSLEC*GGLLYK
Trigger: CTTATATAGAAGCCCTCCCCAACATTCAAGGCTACT...CTTCGCCTCTGCACTTTGATCGTTTGTAATCACACATTCCAGAGACATCAACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp ATTGAGAATTTACAAATAAGATCTGAGGCACTTAGCCCAGTGATGGATAGGTCTAGCCAGGATCATGCTTaGAAGCGAATGGGATCCAGA +
Preference number: 4 (lower is better)
Translates to: IENLQIRSEALSPVMDRSSQDHA*KRMGSR
Trigger: TCTGGATCCCATTCGCTTTCAAGCATGATCCTGGCT...AGACCTATCCATCACTGGGCTAAGTGCCTCAGATCTTATTTGTAAATTCTCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp ATTGAGAATTTACAAATAAGATCTGAGGCACTTAGCCCAGTGATGGATAGGTCTTGGTCAGCACAGTGGTaGTTGTTGTGGTTGGAAGCA +
Preference number: 4 (lower is better)
Translates to: IENLQIRSEALSPVMDRSWSAQW*LLWLEA
Trigger: TGCTTCCAACCACAACAACCACCACTGTGCTGACCA...AGACCTATCCATCACTGGGCTAAGTGCCTCAGATCTTATTTGTAAATTCTCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp TTACAAACGATCAAAGTGCAGAGGCGAAGTGAAGTTTCAGCAAAACTGAATTGTTGGTGGTCAGCACAGTaGTGGTTGTTGTGGTTGGAA +
Preference number: 4 (lower is better)
Translates to: LQTIKVQRRSEVSAKLNCWWSAQ*WLLWLE
Trigger: TTCCAACCACAACAACCACCACTGTGCTGACCACCA...ACAATTCAGTTTTGCTGAAACTTCACTTCGCCTCTGCACTTTGATCGTTTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp TTACAAACGATCAAAGTGCAGAGGCGAAGTGAAGTTTCAGCAAAACTGAATTGTTCCAGGCTTTCCACTTaGAAATGGTCCAGCGCATCA +
Preference number: 4 (lower is better)
Translates to: LQTIKVQRRSEVSAKLNCSRLST*KWSSAS
Trigger: TGATGCGCTGGACCATTTCCAAGTGGAAAGCCTGGA...ACAATTCAGTTTTGCTGAAACTTCACTTCGCCTCTGCACTTTGATCGTTTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp ATTGAGAATTTACAAATAAGATCTGAGGCACTTAGCCCAGTGATGGATAGGTCTGCTTCAAGTTCTCAATaGGCAGATGGGTCACTGACG +
Preference number: 4 (lower is better)
Translates to: IENLQIRSEALSPVMDRSASSSQ*ADGSLT
Trigger: CGTCAGTGACCCATCTGCCCATTGAGAACTTGAAGC...AGACCTATCCATCACTGGGCTAAGTGCCTCAGATCTTATTTGTAAATTCTCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR TCA 90 bp TTACAAACGATCAAAGTGCAGAGGCGAAGTGAAGTTTCAGCAAAACTGAATTGTGAGAGCCGGGGCGTATaGAAGAATGTATTCTTTCAC +
Preference number: 4 (lower is better)
Translates to: LQTIKVQRRSEVSAKLNCESRGV*KNVFFH
Trigger: GTGAAAGAATACATTCTTTCATACGCCCCGGCTCTC...ACAATTCAGTTTTGCTGAAACTTCACTTCGCCTCTGCACTTTGATCGTTTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR GCA 90 bp GTTCAGACCAAGAAATGTGGCCAAATTCTGACTGAAGAGGCCCAAATGCCAGGTACAGAGAGTCTTCCTTaGCTTTTAAAATTCCTTCAT +
Preference number: 4 (lower is better)
Translates to: VQTKKCGQILTEEAQMPGTESLP*LLKFLH
Trigger: ATGAAGGAATTTTAAAAGGCAAGGAAGACTCTCTGT...ACCTGGCATTTGGGCCTCTTCAGTCAGAATTTGGCCACATTTCTTGGTCTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CCA 90 bp TCTGGAAATCACACTGGATCCACTGCAGGGTTGATGTCTCTGGAATGTGTGATTAATTCTCTGTCCATTTaGTTTTCCAATACTACCAGG +
Preference number: 4 (lower is better)
Translates to: SGNHTGSTAGLMSLECVINSLSI*FSNTTR
Trigger: CCTGGTAGTATTGGAAAACCAAATGGACAGAGAATT...AATCACACATTCCAGAGACATCAACCCTGCAGTGGATCCAGTGTGATTTCCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR GCA 90 bp TTACAAACGATCAAAGTGCAGAGGCGAAGTGAAGTTTCAGCAAAACTGAATTGTAGGGTCAGGGGATCCTaGTTGATCATACTCATTTTG +
Preference number: 4 (lower is better)
Translates to: LQTIKVQRRSEVSAKLNCRVRGS*LIILIL
Trigger: CAAAATGAGTATGATCAAGCAGGATCCCCTGACCCT...ACAATTCAGTTTTGCTGAAACTTCACTTCGCCTCTGCACTTTGATCGTTTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS GCA 90 bp CCTGGAGCCCAGCCCTGCCAGGAACCTGGACCCGTGGGTGGGTGCTaGCAGGCCGGATGGGTCTCTCAGAGGCTCCCGAACGGCTGGGCT +
Preference number: 5 (lower is better)
Translates to: PGAQPCQEPGPVGGC*QAGWVSQRLPNGWA
Trigger: AGCCCAGCCGTTCGGGAGCCTCTGAGAGACCCATCCGGCCTGGCAGCACCCACCCACGGGTCCAGGTTCCTGGCAGGGCTGGGCTCCAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 90 bp GGGTGCTGCCAGGCCGGATGGGTCTCTCAGAGGCTCCCGAACGGCTaGGCTGAGGTCTGTTGCCACTGTTCCCTGACTGGGAGCCCATCT +
Preference number: 5 (lower is better)
Translates to: GCCQAGWVSQRLPNG*AEVCCHCSLTGSPS
Trigger: AGATGGGCTCCCAGTCAGGGAACAGTGGCAACAGACCTCAGCCCAGCCGTTCGGGAGCCTCTGAGAGACCCATCCGGCCTGGCAGCACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 90 bp ATCTTCTTTGCTGGTGTGGCCTGGAGCCCAGCCCTGCCAGGAACCTaGACCCGTGGGTGGGTGCTGCCAGGCCGGATGGGTCTCTCAGAG +
Preference number: 5 (lower is better)
Translates to: IFFAGVAWSPALPGT*TRGWVLPGRMGLSE
Trigger: CTCTGAGAGACCCATCCGGCCTGGCAGCACCCACCCACGGGTCCAGGTTCCTGGCAGGGCTGGGCTCCAGGCCACACCAGCAAAGAAGAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS GCA 90 bp GGTGGAAGGGGCCCGGGTGGTATACCTTGGCCAGGAGTGCGTGCTTaGGCTGGGACTTGCAGTGACAGGGTTTCGAGGCTGGTACCAGGT +
Preference number: 5 (lower is better)
Translates to: GGRGPGGIPWPGVRA*AGTCSDRVSRLVPG
Trigger: ACCTGGTACCAGCCTCGAAACCCTGTCACTGCAAGTCCCAGCGCAAGCACGCACTCCTGGCCAAGGTATACCACCCGGGCCCCTTCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 90 bp GCGGGTCGAGAGGATCCTCCCTGCAGTAGGGAATGGCTCCGGGGTTaGGCTGCAGCGCTGGAATCTTCCTCGCTGGTGGAAGAATGGGAC +
Preference number: 5 (lower is better)
Translates to: AGREDPPCSREWLRG*AAALESSSLVEEWD
Trigger: GTCCCATTCTTCCACCAGCGAGGAAGATTCCAGCGCTGCAGCCCAACCCCGGAGCCATTCCCTACTGCAGGGAGGATCCTCTCGACCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 90 bp GGCAGAGGATGCTTGGAAGACGAGATCTTCTTTGCTGGTGTGGCCTaGAGCCCAGCCCTGCCAGGAACCTGGACCCGTGGGTGGGTGCTG +
Preference number: 5 (lower is better)
Translates to: GRGCLEDEIFFAGVA*SPALPGTWTRGWVL
Trigger: CAGCACCCACCCACGGGTCCAGGTTCCTGGCAGGGCTGGGCTCCAGGCCACACCAGCAAAGAAGATCTCGTCTTCCAAGCATCCTCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS TCA 90 bp GGTGCGACCATCTCCCCCGAGTCTCACCCGGAGAGGGTTGCCATGTaGGTCTTGCAGGTACCGCCCTTCTGCATTCAACACCAAGCCGCG +
Preference number: 5 (lower is better)
Translates to: GATISPESHPERVAM*VLQVPPFCIQHQAA
Trigger: CGCGGCTTGGTGTTGAATGCAGAAGGGCGGTACCTGCAAGACTCACATGGCAACCCTCTCCGGGTGAGACTCGGGGGAGATGGTCGCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS GCA 90 bp GCTCTCAGCTCTGTAAACGGGGCGGCTCACTCCGCTGTGGTTCTCTaGGGTAACCAGCACGAAGTACACCACCCCCGGCTCCACGTCCTT +
Preference number: 5 (lower is better)
Translates to: ALSSVNGAAHSAVVL*GNQHEVHHPRLHVL
Trigger: AAGGACGTGGAGCCGGGGGTGGTGTACTTCGTGCTGGTTACCGCAGAGAACCACAGCGGAGTGAGCCGCCCCGTTTACAGAGCTGAGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000239425.2
CDS CCA 90 bp TCCCTAGAAAGTGCGGGTCGAGAGGATCCTCCCTGCAGTAGGGAATaGCTCCGGGGTTGGGCTGCAGCGCTGGAATCTTCCTCGCTGGTG +
Preference number: 5 (lower is better)
Translates to: SLESAGREDPPCSRE*LRGWAAALESSSLV
Trigger: CACCAGCGAGGAAGATTCCAGCGCTGCAGCCCAACCCCGGAGCCATTCCCTACTGCAGGGAGGATCCTCTCGACCCGCACTTTCTAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS TCA 90 bp TCCAGACAGGCGTGGCGCCTTCCATGCAACGGACAGCCTGTCGTCTaGGGCTCGGACACGCATACGCAAGGGCTTGTTGGGCACTTCCTT +
Preference number: 5 (lower is better)
Translates to: SRQAWRLPCNGQPVV*GSDTHTQGLVGHFL
Trigger: AAGGAAGTGCCCAACAAGCCCTTGCGTATGCGTGTCCGAGCCTCAGACGACAGGCTGTCCGTTGCATGGAAGGCGCCACGCCTGTCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097425.10
ENSMUST00000167580.8
ENSMUST00000239425.2
CDS TCA 90 bp ACCTGGTGCCATTCTTCTGGGAACAGTGGACCCAGGGGAGGGCTGTaGTCTCGATGCTGGATGTCTAGCAGGGGACAGCTGGCGGCTGGT +
Preference number: 5 (lower is better)
Translates to: TWCHSSGNSGPRGGL*SRCWMSSRGQLAAG
Trigger: ACCAGCCGCCAGCTGTCCCCTGCTAGACATCCAGCATCGAGATCACAGCCCTCCCCTGGGTCCACTGTTCCCAGAAGAATGGCACCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS GCA 90 bp CCATCTCCCCCGAGTCTCACCCGGAGAGGGTTGCCATGTGAGTCTTaGAGGTACCGCCCTTCTGCATTCAACACCAAGCCGCGATCCAGG +
Preference number: 5 (lower is better)
Translates to: PSPPSLTRRGLPCES*RYRPSAFNTKPRSR
Trigger: CCTGGATCGCGGCTTGGTGTTGAATGCAGAAGGGCGGTACCTGCAAGACTCACATGGCAACCCTCTCCGGGTGAGACTCGGGGGAGATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 90 bp GCCTGTCCATCACTTCCTTGCGGGGCAGCACTGGCAGGCCAGTCCTaGCTGGAGTCCTACCAGGAGTCAGAACCCCATGACCAGATCTAC +
Preference number: 5 (lower is better)
Translates to: ACPSLPCGAALAGQS*LESYQESEPHDQIY
Trigger: GTAGATCTGGTCATGGGGTTCTGACTCCTGGTAGGACTCCAGCCAGGACTGGCCTGCCAGTGCTGCCCCGCAAGGAAGTGATGGACAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 90 bp GGAACCTACGCTGCATCCGCTGCCGCAAAGACAGCATTGGTGTCGTaGAAGAGTAGGTGGAAGGGGCCCGGGTGGTATACCTTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: GTYAASAAAKTALVS*KSRWKGPGWYTLAR
Trigger: CCTGGCCAAGGTATACCACCCGGGCCCCTTCCACCTACTCTTCCACGACACCAATGCTGTCTTTGCGGCAGCGGATGCAGCGTAGGTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 90 bp TGGCGTCCGGAACCTACGCTGCATCCGCTGCCGCAAAGACAGCATTaGTGTCGTGGAAGAGTAGGTGGAAGGGGCCCGGGTGGTATACCT +
Preference number: 5 (lower is better)
Translates to: WRPEPTLHPLPQRQH*CRGRVGGRGPGGIP
Trigger: AGGTATACCACCCGGGCCCCTTCCACCTACTCTTCCACGACACCAATGCTGTCTTTGCGGCAGCGGATGCAGCGTAGGTTCCGGACGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS GCA 90 bp CCACGATGGTGCGACCATCTCCCCCGAGTCTCACCCGGAGAGGGTTaGCATGTGAGTCTTGCAGGTACCGCCCTTCTGCATTCAACACCA +
Preference number: 5 (lower is better)
Translates to: PRWCDHLPRVSPGEG*HVSLAGTALLHSTP
Trigger: TGGTGTTGAATGCAGAAGGGCGGTACCTGCAAGACTCACATGGCAACCCTCTCCGGGTGAGACTCGGGGGAGATGGTCGCACCATCGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS GCA 90 bp GTAGTGGTCGTTGTCCTGCGAGTAGCTCGAATTGTAGTTGTGGGATaGCTGGTAGTGGTTGTGCGGCGGGTGGTTGTGCGGCGGGTGGTG +
Preference number: 5 (lower is better)
Translates to: VVVVVLRVARIVVVG*LVVVVRRVVVRRVV
Trigger: CACCACCCGCCGCACAACCACCCGCCGCACAACCACTACCAGGCATCCCACAACTACAATTCGAGCTACTCGCAGGACAACGACCACTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 90 bp CGGGGTTGGGCTGCAGCGCTGGAATCTTCCTCGCTGGTGGAAGAATaGGACTGGCTCGATGCGGATGATGATGATGCCTTTGTACCCGGC +
Preference number: 5 (lower is better)
Translates to: RGWAAALESSSLVEE*DWLDADDDDAFVPG
Trigger: GCCGGGTACAAAGGCATCATCATCATCCGCATCGAGCCAGTCCCATTCTTCCACCAGCGAGGAAGATTCCAGCGCTGCAGCCCAACCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 90 bp CTAAGGGCTTCCCTCCGAGACTCAAGATGGGTTTATCCTGGGCACTaGCCACAGGTTTGCCATGTCTCCCCTGCCCAAAGAGGGGGAGGC +
Preference number: 5 (lower is better)
Translates to: LRASLRDSRWVYPGH*PQVCHVSPAQRGGG
Trigger: GCCTCCCCCTCTTTGGGCAGGGGAGACATGGCAAACCTGTGGCCAGTGCCCAGGATAAACCCATCTTGAGTCTCGGAGGGAAGCCCTTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 90 bp CCCATGTTAGTGGACAGCAGTTTCACATGCCTTGGCTTCAGTGGGTaGTCAACTGGGGGTCCTGCTGAGGTAGCCACCGGTAGCAGCGCC +
Preference number: 5 (lower is better)
Translates to: PMLVDSSFTCLGFSG*STGGPAEVATGSSA
Trigger: GGCGCTGCTACCGGTGGCTACCTCAGCAGGACCCCCAGTTGACCACCCACTGAAGCCAAGGCATGTGAAACTGCTGTCCACTAACATGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp AGGAGCAAAGAGCATTCTGTGAAGCCAGCAGAGCACGCCAGTGCTGTTCCCTGGGATCTTCGTGGGCTCTaGGCTCCAGACAGGCGTGGC +
Preference number: 5 (lower is better)
Translates to: RSKEHSVKPAEHASAVPWDLRGL*APDRRG
Trigger: GCCACGCCTGTCTGGAGCCAAGAGCCCACGAAGATC...CCAGGGAACAGCACTGGCGTGCTCTGCTGGCTTCACAGAATGCTCTTTGCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp CCAGGTCCACCCTGTGGCCTCTTGACACACTGGGGCAGCGGGCTTGGAACACTGGTTTGGGGAATCTGCTaGGATTTCTGCTGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: PGPPCGLLTHWGSGLGTLVWGIC*DFCCGQ
Trigger: CTGCCCACAGCAGAAATCCAAGCAGATTCCCCAAAC...CAGTGTTCCAAGCCCGCTGCCCCAGTGTGTCAAGAGGCCACAGGGTGGACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp CCCTGTGGCCTCTTGACACACTGGGGCAGCGGGCTTGGAACACTGTCTTTCTTTGCACTGGCCACAGGTTaGCCATGTCTCCCCTGCCCA +
Preference number: 5 (lower is better)
Translates to: PCGLLTHWGSGLGTLSFFALATG*PCLPCP
Trigger: TGGGCAGGGGAGACATGGCAAACCTGTGGCCAGTGC...AAAGAAAGACAGTGTTCCAAGCCCGCTGCCCCAGTGTGTCAAGAGGCCACAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS TCA 90 bp CGTATCAAACTAAAGTGCCCCAAGGCAGGCCGGGTCTGTTGGATCTaGGCAGTGGCCTCAGCTCGCCTTCTGGTGTCTCCTGCAGCTCTG +
Preference number: 5 (lower is better)
Translates to: RIKLKCPKAGRVCWI*AVASARLLVSPAAL
Trigger: CAGAGCTGCAGGAGACACCAGAAGGCGAGCTGAGGCCACTGCTCAGATCCAACAGACCCGGCCTGCCTTGGGGCACTTTAGTTTGATACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS GCA 90 bp CTCCGAGACTCAAGATGGGTTTATCCTGGGCACTGGCCACAGGTTTaGCATGTCTCCCCTGCCCAAAGAGGGGGAGGCCATCAGGACTCA +
Preference number: 5 (lower is better)
Translates to: LRDSRWVYPGHWPQV*HVSPAQRGGGHQDS
Trigger: TGAGTCCTGATGGCCTCCCCCTCTTTGGGCAGGGGAGACATGGCAAACCTGTGGCCAGTGCCCAGGATAAACCCATCTTGAGTCTCGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS GCA 90 bp CCAGCAAGGTCAAATTCTTCCTCTGGGAAGGAGCTGACCGTGCCCTaGTCTGGGATGACCTTCGGTGTGGCAGCAGTGGTTGAGGGCATG +
Preference number: 5 (lower is better)
Translates to: PARSNSSSGKELTVP*SGMTFGVAAVVEGM
Trigger: CATGCCCTCAACCACTGCTGCCACACCGAAGGTCATCCCAGAGCAGGGCACGGTCAGCTCCTTCCCAGAGGAAGAATTTGACCTTGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 90 bp CAATGCGTCCCAGGATACGGTGACAACTGTGGGCTTGCCACTGACTaGCCAGACTCTCAGGTTCTCAGGTGCAGTGGTGGGAGCCGATTC +
Preference number: 5 (lower is better)
Translates to: QCVPGYGDNCGLATD*PDSQVLRCSGGSRF
Trigger: GAATCGGCTCCCACCACTGCACCTGAGAACCTGAGAGTCTGGCCAGTCAGTGGCAAGCCCACAGTTGTCACCGTATCCTGGGACGCATTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 90 bp TCGGAGCCCTCTGTCAGGGCAGAGGGACGAGAAGAGCTGACAGTTTaGGAAGGCATACGGGAACTAGAGGCATGGACATCCTGGCGATCC +
Preference number: 5 (lower is better)
Translates to: SEPSVRAEGREELTV*EGIRELEAWTSWRS
Trigger: GGATCGCCAGGATGTCCATGCCTCTAGTTCCCGTATGCCTTCCCAAACTGTCAGCTCTTCTCGTCCCTCTGCCCTGACAGAGGGCTCCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp CCAGAATCCCTAGCGCAGGTTAGTCACACAGGCTGGAAGGATGAACTTGCAGCAGGAATGGCTCCGGGGTaGGGCTGCAGCGCTGGAATC +
Preference number: 5 (lower is better)
Translates to: PESLAQVSHTGWKDELAAGMAPG*GCSAGI
Trigger: GATTCCAGCGCTGCAGCCCAACCCCGGAGCCATTCC...TGCTGCAAGTTCATCCTTCCAGCCTGTGTGACTAACCTGCGCTAGGGATTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS TCA 90 bp CCGGTACAAGCTGGCCCCTCTCTGGGAGCCTCTTCTCAGAGTGTCTaGGCCCCCAGAGATTGGATGACTGGAAGAGGAAGGTGTACGATC +
Preference number: 5 (lower is better)
Translates to: PVQAGPSLGASSQSV*APRDWMTGRGRCTI
Trigger: GATCGTACACCTTCCTCTTCCAGTCATCCAATCTCTGGGGGCTCAGACACTCTGAGAAGAGGCTCCCAGAGAGGGGCCAGCTTGTACCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS GCA 90 bp AACTGTGGGCTTGCCACTGACTGGCCAGACTCTCAGGTTCTCAGGTaGAGTGGTGGGAGCCGATTCTGGCGTTCTCTGGAAGATGGATGC +
Preference number: 5 (lower is better)
Translates to: NCGLATDWPDSQVLR*SGGSRFWRSLEDGC
Trigger: GCATCCATCTTCCAGAGAACGCCAGAATCGGCTCCCACCACTGCACCTGAGAACCTGAGAGTCTGGCCAGTCAGTGGCAAGCCCACAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 90 bp TGGGCTGCAGCGCTGGAATCTTCCTCGCTGGTGGAAGAATGGGACTaGCTCGATGCGGATGATGATGATGCCTTTGTACCCGGCTGCATC +
Preference number: 5 (lower is better)
Translates to: WAAALESSSLVEEWD*LDADDDDAFVPGCI
Trigger: GATGCAGCCGGGTACAAAGGCATCATCATCATCCGCATCGAGCCAGTCCCATTCTTCCACCAGCGAGGAAGATTCCAGCGCTGCAGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 90 bp CTCCTGGATGTACATCCGCTCCAGCAGCTTTGGAGTTTTCTGGGATaGGTTCCTTCCGGTACAAGCTGGCCCCTCTCTGGGAGCCTCTTC +
Preference number: 5 (lower is better)
Translates to: LLDVHPLQQLWSFLG*VPSGTSWPLSGSLF
Trigger: GAAGAGGCTCCCAGAGAGGGGCCAGCTTGTACCGGAAGGAACCCATCCCAGAAAACTCCAAAGCTGCTGGAGCGGATGTACATCCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 90 bp TTTGCCTCCTGGATGTACATCCGCTCCAGCAGCTTTGGAGTTTTCTaGGATGGGTTCCTTCCGGTACAAGCTGGCCCCTCTCTGGGAGCC +
Preference number: 5 (lower is better)
Translates to: FASWMYIRSSSFGVF*DGFLPVQAGPSLGA
Trigger: GGCTCCCAGAGAGGGGCCAGCTTGTACCGGAAGGAACCCATCCCAGAAAACTCCAAAGCTGCTGGAGCGGATGTACATCCAGGAGGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 90 bp AAGCCCACTAAGGGCTTCCCTCCGAGACTCAAGATGGGTTTATCCTaGGCACTGGCCACAGGTTTGCCATGTCTCCCCTGCCCAAAGAGG +
Preference number: 5 (lower is better)
Translates to: KPTKGFPPRLKMGLS*ALATGLPCLPCPKR
Trigger: CCTCTTTGGGCAGGGGAGACATGGCAAACCTGTGGCCAGTGCCCAGGATAAACCCATCTTGAGTCTCGGAGGGAAGCCCTTAGTGGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS TCA 90 bp TCTCGATGCTGGATGTCTAGCAGGGGACAGCTGGCGGCTGGTGGATaGTGGAGGTGTTTGAGGAGCACCCTCATCCGTGCTCAGTTGAAA +
Preference number: 5 (lower is better)
Translates to: SRCWMSSRGQLAAGG*WRCLRSTLIRAQLK
Trigger: TTTCAACTGAGCACGGATGAGGGTGCTCCTCAAACACCTCCATCATCCACCAGCCGCCAGCTGTCCCCTGCTAGACATCCAGCATCGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS GCA 90 bp GACCCGGACACTAATGTCTTCAGGCACGTCCAGCTCATCCTCTTCTaGATGCTTGCGCTTTGTGAGGGCAGCCCTATAGACGGGCTGACT +
Preference number: 5 (lower is better)
Translates to: DPDTNVFRHVQLILF*MLALCEGSPIDGLT
Trigger: AGTCAGCCCGTCTATAGGGCTGCCCTCACAAAGCGCAAGCATGCAGAAGAGGATGAGCTGGACGTGCCTGAAGACATTAGTGTCCGGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097425.10
ENSMUST00000167580.8
ENSMUST00000239425.2
CDS GCA 90 bp TGGGACTGGCTCGATGCGGATGATGATGATGCCTTTGTACCCGGCTaGATCCGGCTTTTGTCTCTGAGCATGTTAGAAGCCGCATGGCGG +
Preference number: 5 (lower is better)
Translates to: WDWLDADDDDAFVPG*IRLLSLSMLEAAWR
Trigger: CCGCCATGCGGCTTCTAACATGCTCAGAGACAAAAGCCGGATGCAGCCGGGTACAAAGGCATCATCATCATCCGCATCGAGCCAGTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS GCA 90 bp GAGCGGAGTGAGTGGGAGCCCGAGGGTCTGGGCCTTCAATTTCAGTaGTGTTGTCCTCGTAGCTGCTCTGGGAACCCTCATTCTGATTCT +
Preference number: 5 (lower is better)
Translates to: ERSEWEPEGLGLQFQ*CCPRSCSGNPHSDS
Trigger: AGAATCAGAATGAGGGTTCCCAGAGCAGCTACGAGGACAACAGCACTGAAATTGAAGGCCCAGACCCTCGGGCTCCCACTCACTCCGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 90 bp TGGCCAGACTCTCAGGTTCTCAGGTGCAGTGGTGGGAGCCGATTCTaGCGTTCTCTGGAAGATGGATGCACTCCACTTGCCATCTCGTTC +
Preference number: 5 (lower is better)
Translates to: WPDSQVLRCSGGSRF*RSLEDGCTPLAISF
Trigger: GAACGAGATGGCAAGTGGAGTGCATCCATCTTCCAGAGAACGCCAGAATCGGCTCCCACCACTGCACCTGAGAACCTGAGAGTCTGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 90 bp TTTGAGGAGCACCCTCATCCGTGCTCAGTTGAAAGCCCTGAGCCTTaGAGGACAGAGGGGATTTGCCTCCTGGATGTACATCCGCTCCAG +
Preference number: 5 (lower is better)
Translates to: FEEHPHPCSVESPEP*RTEGICLLDVHPLQ
Trigger: CTGGAGCGGATGTACATCCAGGAGGCAAATCCCCTCTGTCCTCCAAGGCTCAGGGCTTTCAACTGAGCACGGATGAGGGTGCTCCTCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 90 bp TTCCAGGGTCCCAGGGGGACAAGTAGGAGAAGGGGTGGTAGGTTCTaGAGTGGTGGTAGTGGTCGTTGTCCTGCGAGTAGCTCGAATTGT +
Preference number: 5 (lower is better)
Translates to: FQGPRGTSRRRGGRF*SGGSGRCPASSSNC
Trigger: ACAATTCGAGCTACTCGCAGGACAACGACCACTACCACCACTCCAGAACCTACCACCCCTTCTCCTACTTGTCCCCCTGGGACCCTGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 90 bp CCGACCATGGCAATCAGTGTAGCCAGGATCATGCTTGAAAGCGAATaGGATCCAGATGGGCTCACCACCTGGTGGCCTCACAACCAGCAG +
Preference number: 5 (lower is better)
Translates to: PTMAISVARIMLESE*DPDGLTTWWPHNQQ
Trigger: CTGCTGGTTGTGAGGCCACCAGGTGGTGAGCCCATCTGGATCCCATTCGCTTTCAAGCATGATCCTGGCTACACTGATTGCCATGGTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp AGGAGCAAAGAGCATTCTGTGAAGCCAGCAGAGCACGCCAGTGCTGTTCCCTGGCTACTGGAAGCATCTTaGGGTGGGTCCCATGTGACC +
Preference number: 5 (lower is better)
Translates to: RSKEHSVKPAEHASAVPWLLEAS*GGSHVT
Trigger: GGTCACATGGGACCCACCCAAAGATGCTTCCAGTAG...CCAGGGAACAGCACTGGCGTGCTCTGCTGGCTTCACAGAATGCTCTTTGCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp AGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCACTGCGGAATGGCTCCGGGGTaGGGCTGCAGCGCTGGAATC +
Preference number: 5 (lower is better)
Translates to: RVFRFCAWRVWKSHWIHCGMAPG*GCSAGI
Trigger: GATTCCAGCGCTGCAGCCCAACCCCGGAGCCATTCC...GCAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp TGTGAAGCCAGCAGAGCACGCCAGTGCTGTTCCCTGGAGATCCCAGAGTGTTCAAAGACGAGATCTTCTTaGCTGGTGTGGCCTGGAGCC +
Preference number: 5 (lower is better)
Translates to: CEASRARQCCSLEIPECSKTRSS*LVWPGA
Trigger: GGCTCCAGGCCACACCAGCAAAGAAGATCTCGTCTT...TGAACACTCTGGGATCTCCAGGGAACAGCACTGGCGTGCTCTGCTGGCTTCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS TCA 90 bp TTCTGTTTTTCCACAAGAGGATCCACCCAGGCCACGAGCACGGACTaGGACGACATGACCCGGACACTAATGTCTTCAGGCACGTCCAGC +
Preference number: 5 (lower is better)
Translates to: FCFSTRGSTQATSTD*DDMTRTLMSSGTSS
Trigger: GCTGGACGTGCCTGAAGACATTAGTGTCCGGGTCATGTCGTCTCAGTCCGTGCTCGTGGCCTGGGTGGATCCTCTTGTGGAAAAACAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS GCA 90 bp TCCCATGTGACCTTCAGGCCCATGTTAGTGGACAGCAGTTTCACATaGCTTGGCTTCAGTGGGTGGTCAACTGGGGGTCCTGCTGAGGTA +
Preference number: 5 (lower is better)
Translates to: SHVTFRPMLVDSSFT*LGFSGWSTGGPAEV
Trigger: TACCTCAGCAGGACCCCCAGTTGACCACCCACTGAAGCCAAGGCATGTGAAACTGCTGTCCACTAACATGGGCCTGAAGGTCACATGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000239425.2
CDS CCA 90 bp CAGTTGAAAGCCCTGAGCCTTGGAGGACAGAGGGGATTTGCCTCCTaGATGTACATCCGCTCCAGCAGCTTTGGAGTTTTCTGGGATGGG +
Preference number: 5 (lower is better)
Translates to: QLKALSLGGQRGFAS*MYIRSSSFGVFWDG
Trigger: CCCATCCCAGAAAACTCCAAAGCTGCTGGAGCGGATGTACATCCAGGAGGCAAATCCCCTCTGTCCTCCAAGGCTCAGGGCTTTCAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 90 bp CCGGGGAGCGTGCTGAGGAGGCAGATCACTCTTTGTCAGGTCGTTTaGAATGAGTTCATCCAGGCTTTCCACTTGGAAATGGTCCAGCGC +
Preference number: 5 (lower is better)
Translates to: PGSVLRRQITLCQVV*NEFIQAFHLEMVQR
Trigger: GCGCTGGACCATTTCCAAGTGGAAAGCCTGGATGAACTCATTCCAAACGACCTGACAAAGAGTGATCTGCCTCCTCAGCACGCTCCCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 90 bp ACATCTCCAGGGATGGCTTTGTTCCAGTCCACAATGACAAAGGAGTaGCAGCCTTCCATGGCGACCACAGTAATGTTCCGGGGAGCGTGC +
Preference number: 5 (lower is better)
Translates to: TSPGMALFQSTMTKE*QPSMATTVMFRGAC
Trigger: GCACGCTCCCCGGAACATTACTGTGGTCGCCATGGAAGGCTGCCACTCCTTTGTCATTGTGGACTGGAACAAAGCCATCCCTGGAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp TCCCAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCAGATCTTCGTGGGCTCTaGGCTCCAGACAGGCGTGGC +
Preference number: 5 (lower is better)
Translates to: SQSVQVLCLESLEITLDPDLRGL*APDRRG
Trigger: GCCACGCCTGTCTGGAGCCAAGAGCCCACGAAGATC...TGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp AGGAGCAAAGAGCATTCTGTGAAGCCAGCAGAGCACGCCAGTGCTGTTCCCTGGTTTGCTCCAAACGGTTaGAGAGCCGGGGCGTATGAA +
Preference number: 5 (lower is better)
Translates to: RSKEHSVKPAEHASAVPWFAPNG*RAGAYE
Trigger: TTCATACGCCCCGGCTCTCAAACCGTTTGGAGCAAA...CCAGGGAACAGCACTGGCGTGCTCTGCTGGCTTCACAGAATGCTCTTTGCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp TTTTGCCCAGAATCCCTAGCGCAGGTTAGTCACACAGGCTGGAAGGATGAACTTGCGACAATGAAGGCTTaGGAGTGTGGCCCCGGGCCT +
Preference number: 5 (lower is better)
Translates to: FCPESLAQVSHTGWKDELATMKA*ECGPGP
Trigger: AGGCCCGGGGCCACACTCCAAAGCCTTCATTGTCGC...AAGTTCATCCTTCCAGCCTGTGTGACTAACCTGCGCTAGGGATTCTGGGCAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp GCCTGGAGAGTCTGGAAATCACACTGGATCCACTGCAGGGTTGATGTCTCTGGAGACCTGGCTGGATTCTaGGGAGATGACGGGGAAGAG +
Preference number: 5 (lower is better)
Translates to: AWRVWKSHWIHCRVDVSGDLAGF*GDDGEE
Trigger: CTCTTCCCCGTCATCTCCCAAGAATCCAGCCAGGTC...TCCAGAGACATCAACCCTGCAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS TCA 90 bp TCACATACTGCCGACCATGGCAATCAGTGTAGCCAGGATCATGCTTaGAAGCGAATGGGATCCAGATGGGCTCACCACCTGGTGGCCTCA +
Preference number: 5 (lower is better)
Translates to: SHTADHGNQCSQDHA*KRMGSRWAHHLVAS
Trigger: TGAGGCCACCAGGTGGTGAGCCCATCTGGATCCCATTCGCTTTCAAGCATGATCCTGGCTACACTGATTGCCATGGTCGGCAGTATGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS GCA 90 bp GTGTGTTCTGAGGAAGCTGCAACTTTGGGAGCTGGGGAAGAAGGCTaGTGCAGTTTCTCAGGTTTCCTGCTGCTGTCTCTCCCATTTGGC +
Preference number: 5 (lower is better)
Translates to: VCSEEAATLGAGEEG*CSFSGFLLLSLPFG
Trigger: GCCAAATGGGAGAGACAGCAGCAGGAAACCTGAGAAACTGCAGCAGCCTTCTTCCCCAGCTCCCAAAGTTGCAGCTTCCTCAGAACACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 90 bp CTCAGGTTCTCAGGTGCAGTGGTGGGAGCCGATTCTGGCGTTCTCTaGAAGATGGATGCACTCCACTTGCCATCTCGTTCACCTTGTGAA +
Preference number: 5 (lower is better)
Translates to: LRFSGAVVGADSGVL*KMDALHLPSRSPCE
Trigger: TTCACAAGGTGAACGAGATGGCAAGTGGAGTGCATCCATCTTCCAGAGAACGCCAGAATCGGCTCCCACCACTGCACCTGAGAACCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 90 bp AGGCTGCTGCAGTTTCTCAGGTTTCCTGCTGCTGTCTCTCCCATTTaGCTGGGCACTGGCCTCAGTAGAACTGGTTGTTGGTATAGCGAC +
Preference number: 5 (lower is better)
Translates to: RLLQFLRFPAAVSPI*LGTGLSRTGCWYSD
Trigger: GTCGCTATACCAACAACCAGTTCTACTGAGGCCAGTGCCCAGCCAAATGGGAGAGACAGCAGCAGGAAACCTGAGAAACTGCAGCAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 90 bp CTCTTTGTCAGGTCGTTTGGAATGAGTTCATCCAGGCTTTCCACTTaGAAATGGTCCAGCGCATCAGTCAGGGAGCACGGGGCTGTTGGG +
Preference number: 5 (lower is better)
Translates to: LFVRSFGMSSSRLST*KWSSASVREHGAVG
Trigger: CCCAACAGCCCCGTGCTCCCTGACTGATGCGCTGGACCATTTCCAAGTGGAAAGCCTGGATGAACTCATTCCAAACGACCTGACAAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp GCCTGGAGAGTCTGGAAATCACACTGGATCCACTGCAGGGTTGATGTCTCTGGACTACTGGAAGCATCTTaGGGTGGGTCCCATGTGACC +
Preference number: 5 (lower is better)
Translates to: AWRVWKSHWIHCRVDVSGLLEAS*GGSHVT
Trigger: GGTCACATGGGACCCACCCAAAGATGCTTCCAGTAG...TCCAGAGACATCAACCCTGCAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp AGGAGCAAAGAGCATTCTGTGAAGCCAGCAGAGCACGCCAGTGCTGTTCCCTGGTCTGAGAGAGCATCCTaGACATTTTTGGCTGACGGC +
Preference number: 5 (lower is better)
Translates to: RSKEHSVKPAEHASAVPWSERAS*TFLADG
Trigger: GCCGTCAGCCAAAAATGTCAAGGATGCTCTCTCAGA...CCAGGGAACAGCACTGGCGTGCTCTGCTGGCTTCACAGAATGCTCTTTGCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp TCTGTGAAGCCAGCAGAGCACGCCAGTGCTGTTCCCTGGAGATCCCAGAGTGTTGGCTGCATCCGGCTTTaGTCTCTGAGCATGTTAGAA +
Preference number: 5 (lower is better)
Translates to: SVKPAEHASAVPWRSQSVGCIRL*SLSMLE
Trigger: TTCTAACATGCTCAGAGACAAAAGCCGGATGCAGCC...AACACTCTGGGATCTCCAGGGAACAGCACTGGCGTGCTCTGCTGGCTTCACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp TGTGAAGCCAGCAGAGCACGCCAGTGCTGTTCCCTGGAGATCCCAGAGTGTTCAGGCTGCATCCGGCTTTaGTCTCTGAGCATGTTAGAA +
Preference number: 5 (lower is better)
Translates to: CEASRARQCCSLEIPECSGCIRL*SLSMLE
Trigger: TTCTAACATGCTCAGAGACAAAAGCCGGATGCAGCC...TGAACACTCTGGGATCTCCAGGGAACAGCACTGGCGTGCTCTGCTGGCTTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp CTCTTGACACACTGGGGCAGCGGGCTTGGAACACTGTCTTTCTTTTGCCCAGAACTGAGCCCCCAGAGATaGGATGACTGGAAGAGGAAG +
Preference number: 5 (lower is better)
Translates to: LLTHWGSGLGTLSFFCPELSPQR*DDWKRK
Trigger: CTTCCTCTTCCAGTCATCCAATCTCTGGGGGCTCAG...TTCTGGGCAAAAGAAAGACAGTGTTCCAAGCCCGCTGCCCCAGTGTGTCAAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp GAAGAAGAGAGGAGCAAAGAGCATTCTGTGAAGCCAGCAGAGCACGCCAGTGCTCTGAGCCCCCAGAGATaGGATGACTGGAAGAGGAAG +
Preference number: 5 (lower is better)
Translates to: EEERSKEHSVKPAEHASALSPQR*DDWKRK
Trigger: CTTCCTCTTCCAGTCATCCAATCTCTGGGGGCTCAG...AGCACTGGCGTGCTCTGCTGGCTTCACAGAATGCTCTTTGCTCCTCTCTTCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp GAAGAAGAGAGGAGCAAAGAGCATTCTGTGAAGCCAGCAGAGCACGCCAGTGCTGAGGACAGAGGGGATTaGCCTCCTGGATGTACATCC +
Preference number: 5 (lower is better)
Translates to: EEERSKEHSVKPAEHASAEDRGD*PPGCTS
Trigger: GGATGTACATCCAGGAGGCAAATCCCCTCTGTCCTC...AGCACTGGCGTGCTCTGCTGGCTTCACAGAATGCTCTTTGCTCCTCTCTTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp GAAGAAGAGAGGAGCAAAGAGCATTCTGTGAAGCCAGCAGAGCACGCCAGTGCTAAGACGAGATCTTCTTaGCTGGTGTGGCCTGGAGCC +
Preference number: 5 (lower is better)
Translates to: EEERSKEHSVKPAEHASAKTRSS*LVWPGA
Trigger: GGCTCCAGGCCACACCAGCAAAGAAGATCTCGTCTT...AGCACTGGCGTGCTCTGCTGGCTTCACAGAATGCTCTTTGCTCCTCTCTTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp AGATCCCAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATGCACTGGCCACAGGTTaGCCATGTCTCCCCTGCCCA +
Preference number: 5 (lower is better)
Translates to: RSQSVQVLCLESLEITLDALATG*PCLPCP
Trigger: TGGGCAGGGGAGACATGGCAAACCTGTGGCCAGTGC...ATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTGGGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS TCA 90 bp AGCCCCCAGAGATTGGATGACTGGAAGAGGAAGGTGTACGATCGTTaGCCACAGTGGCTGGAAGTGGCTCTTCATCCTCACCATCTCCAT +
Preference number: 5 (lower is better)
Translates to: SPQRLDDWKRKVYDR*PQWLEVALHPHHLH
Trigger: ATGGAGATGGTGAGGATGAAGAGCCACTTCCAGCCACTGTGGTCAACGATCGTACACCTTCCTCTTCCAGTCATCCAATCTCTGGGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 90 bp AGGAGCAACAAATCTCCTCTTTCCAGCAAGGTCAAATTCTTCCTCTaGGAAGGAGCTGACCGTGCCCTGCTCTGGGATGACCTTCGGTGT +
Preference number: 5 (lower is better)
Translates to: RSNKSPLSSKVKFFL*EGADRALLWDDLRC
Trigger: ACACCGAAGGTCATCCCAGAGCAGGGCACGGTCAGCTCCTTCCCAGAGGAAGAATTTGACCTTGCTGGAAAGAGGAGATTTGTTGCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 90 bp GTCAGGTCGTTTGGAATGAGTTCATCCAGGCTTTCCACTTGGAAATaGTCCAGCGCATCAGTCAGGGAGCACGGGGCTGTTGGGTCTTTA +
Preference number: 5 (lower is better)
Translates to: VRSFGMSSSRLSTWK*SSASVREHGAVGSL
Trigger: TAAAGACCCAACAGCCCCGTGCTCCCTGACTGATGCGCTGGACCATTTCCAAGTGGAAAGCCTGGATGAACTCATTCCAAACGACCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp GAAGAAGAGAGGAGCAAAGAGCATTCTGTGAAGCCAGCAGAGCACGCCAGTGCTATACGCAAGGGCTTGTaGGGCACTTCCTTTTCCACG +
Preference number: 5 (lower is better)
Translates to: EEERSKEHSVKPAEHASAIRKGL*GTSFST
Trigger: CGTGGAAAAGGAAGTGCCCAACAAGCCCTTGCGTAT...AGCACTGGCGTGCTCTGCTGGCTTCACAGAATGCTCTTTGCTCCTCTCTTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097425.10
CDS-3UTR CAA 90 bp CCAGAATCCCTAGCGCAGGTTAGTCACACAGGCTGGAAGGATGAACTTGCAGCAACGCCTGTTAGAGACTaGCTTGTAATCCCACCTGGC +
Preference number: 5 (lower is better)
Translates to: PESLAQVSHTGWKDELAATPVRD*LVIPPG
Trigger: GCCAGGTGGGATTACAAGCAAGTCTCTAACAGGCGT...TGCTGCAAGTTCATCCTTCCAGCCTGTGTGACTAACCTGCGCTAGGGATTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp AGAAGAGAGGAGCAAAGAGCATTCTGTGAAGCCAGCAGAGCACGCCAGTGCTGTACGCCTGTTAGAGACTaGCTTGTAATCCCACCTGGC +
Preference number: 5 (lower is better)
Translates to: RREEQRAFCEASRARQCCTPVRD*LVIPPG
Trigger: GCCAGGTGGGATTACAAGCAAGTCTCTAACAGGCGT...ACAGCACTGGCGTGCTCTGCTGGCTTCACAGAATGCTCTTTGCTCCTCTCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp TCCCAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCAGTGACAACTGTGGGCTaGCCACTGACTGGCCAGACT +
Preference number: 5 (lower is better)
Translates to: SQSVQVLCLESLEITLDPVTTVG*PLTGQT
Trigger: AGTCTGGCCAGTCAGTGGCAAGCCCACAGTTGTCAC...TGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp CTCTTGACACACTGGGGCAGCGGGCTTGGAACACTGTCTTTCTTTTGCCCAGAATTTGCTCCAAACGGTTaGAGAGCCGGGGCGTATGAA +
Preference number: 5 (lower is better)
Translates to: LLTHWGSGLGTLSFFCPEFAPNG*RAGAYE
Trigger: TTCATACGCCCCGGCTCTCAAACCGTTTGGAGCAAA...TTCTGGGCAAAAGAAAGACAGTGTTCCAAGCCCGCTGCCCCAGTGTGTCAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp TCTGGAAATCACACTGGATCCACTGCAGGGTTGATGTCTCTGGAATGTGTGATTGCGACAATGAAGGCTTaGGAGTGTGGCCCCGGGCCT +
Preference number: 5 (lower is better)
Translates to: SGNHTGSTAGLMSLECVIATMKA*ECGPGP
Trigger: AGGCCCGGGGCCACACTCCAAAGCCTTCATTGTCGC...AATCACACATTCCAGAGACATCAACCCTGCAGTGGATCCAGTGTGATTTCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp AGAAGAGAGGAGCAAAGAGCATTCTGTGAAGCCAGCAGAGCACGCCAGTGCTGTGTTTGGGGAATCTGCTaGGATTTCTGCTGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: RREEQRAFCEASRARQCCVWGIC*DFCCGQ
Trigger: CTGCCCACAGCAGAAATCCAAGCAGATTCCCCAAAC...ACAGCACTGGCGTGCTCTGCTGGCTTCACAGAATGCTCTTTGCTCCTCTCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp AGAAGAGAGGAGCAAAGAGCATTCTGTGAAGCCAGCAGAGCACGCCAGTGCTGTCTTGGTCCGCGGAGTTaGGGGAATCTGCTTGGATTT +
Preference number: 5 (lower is better)
Translates to: RREEQRAFCEASRARQCCLGPRS*GNLLGF
Trigger: AAATCCAAGCAGATTCCCCAAACTCCGCGGACCAAG...ACAGCACTGGCGTGCTCTGCTGGCTTCACAGAATGCTCTTTGCTCCTCTCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp CCAGGTCCACCCTGTGGCCTCTTGACACACTGGGGCAGCGGGCTTGGAACACTGATGAGGGTTTTTGGCTaGAACTTTGAAGTAATACCT +
Preference number: 5 (lower is better)
Translates to: PGPPCGLLTHWGSGLGTLMRVFG*NFEVIP
Trigger: AGGTATTACTTCAAAGTTCAAGCCAAAAACCCTCAT...CAGTGTTCCAAGCCCGCTGCCCCAGTGTGTCAAGAGGCCACAGGGTGGACCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS TCA 90 bp GAGCGTGCTGAGGAGGCAGATCACTCTTTGTCAGGTCGTTTGGAATaGGTTCATCCAGGCTTTCCACTTGGAAATGGTCCAGCGCATCAG +
Preference number: 5 (lower is better)
Translates to: ERAEEADHSLSGRLE*VHPGFPLGNGPAHQ
Trigger: CTGATGCGCTGGACCATTTCCAAGTGGAAAGCCTGGATGAACTCATTCCAAACGACCTGACAAAGAGTGATCTGCCTCCTCAGCACGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 90 bp TGCTGCAGTTTCTCAGGTTTCCTGCTGCTGTCTCTCCCATTTGGCTaGGCACTGGCCTCAGTAGAACTGGTTGTTGGTATAGCGACAATG +
Preference number: 5 (lower is better)
Translates to: CCSFSGFLLLSLPFG*ALASVELVVGIATM
Trigger: CATTGTCGCTATACCAACAACCAGTTCTACTGAGGCCAGTGCCCAGCCAAATGGGAGAGACAGCAGCAGGAAACCTGAGAAACTGCAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 90 bp TGGATGACTGGAAGAGGAAGGTGTACGATCGTTGACCACAGTGGCTaGAAGTGGCTCTTCATCCTCACCATCTCCATAGACATCAGAGCC +
Preference number: 5 (lower is better)
Translates to: WMTGRGRCTIVDHSG*KWLFILTISIDIRA
Trigger: GGCTCTGATGTCTATGGAGATGGTGAGGATGAAGAGCCACTTCCAGCCACTGTGGTCAACGATCGTACACCTTCCTCTTCCAGTCATCCA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp TGTGAAGCCAGCAGAGCACGCCAGTGCTGTTCCCTGGAGATCCCAGAGTGTTCAGTCTCCGCATTCACCTaGATGGACTTAAGACTTTTC +
Preference number: 5 (lower is better)
Translates to: CEASRARQCCSLEIPECSVSAFT*MDLRLF
Trigger: GAAAAGTCTTAAGTCCATCAAGGTGAATGCGGAGAC...TGAACACTCTGGGATCTCCAGGGAACAGCACTGGCGTGCTCTGCTGGCTTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp GTTCAGACCAAGAAATGTGGCCAAATTCTGACTGAAGAGGCCCAAATGCCAGGTGAGGAAGCTGCAACTTaGGGAGCTGGGGAAGAAGGC +
Preference number: 5 (lower is better)
Translates to: VQTKKCGQILTEEAQMPGEEAAT*GAGEEG
Trigger: GCCTTCTTCCCCAGCTCCCAAAGTTGCAGCTTCCTC...ACCTGGCATTTGGGCCTCTTCAGTCAGAATTTGGCCACATTTCTTGGTCTGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp CCAGAATCCCTAGCGCAGGTTAGTCACACAGGCTGGAAGGATGAACTTGCAGCAGGTGGCAGAGGATGCTaGGAAGACGAGATCTTCTTT +
Preference number: 5 (lower is better)
Translates to: PESLAQVSHTGWKDELAAGGRGC*EDEIFF
Trigger: AAAGAAGATCTCGTCTTCCAAGCATCCTCTGCCACC...TGCTGCAAGTTCATCCTTCCAGCCTGTGTGACTAACCTGCGCTAGGGATTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp CCAGAATCCCTAGCGCAGGTTAGTCACACAGGCTGGAAGGATGAACTTGCAGCATCTCCAGGGATGGCTTaGTTCCAGTCCACAATGACA +
Preference number: 5 (lower is better)
Translates to: PESLAQVSHTGWKDELAASPGMA*FQSTMT
Trigger: TGTCATTGTGGACTGGAACAAAGCCATCCCTGGAGA...TGCTGCAAGTTCATCCTTCCAGCCTGTGTGACTAACCTGCGCTAGGGATTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp CTCTTGACACACTGGGGCAGCGGGCTTGGAACACTGTCTTTCTTTTGCCCAGAATCTCCAGGGATGGCTTaGTTCCAGTCCACAATGACA +
Preference number: 5 (lower is better)
Translates to: LLTHWGSGLGTLSFFCPESPGMA*FQSTMT
Trigger: TGTCATTGTGGACTGGAACAAAGCCATCCCTGGAGA...TTCTGGGCAAAAGAAAGACAGTGTTCCAAGCCCGCTGCCCCAGTGTGTCAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp CTCTTGACACACTGGGGCAGCGGGCTTGGAACACTGTCTTTCTTTTGCCCAGAAATACGCAAGGGCTTGTaGGGCACTTCCTTTTCTGTG +
Preference number: 5 (lower is better)
Translates to: LLTHWGSGLGTLSFFCPEIRKGL*GTSFSV
Trigger: CACAGAAAAGGAAGTGCCCAACAAGCCCTTGCGTAT...TTCTGGGCAAAAGAAAGACAGTGTTCCAAGCCCGCTGCCCCAGTGTGTCAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000239425.2
CDS TCA 90 bp TCTCTGGAAGATGGATGCACTCCACTTGCCATCTCGTTCACCTTGTaGAATCCGGACTGCGAATTCATACACGGTGTCTGGGATCAGGCT +
Preference number: 5 (lower is better)
Translates to: SLEDGCTPLAISFTL*NPDCEFIHGVWDQA
Trigger: AGCCTGATCCCAGACACCGTGTATGAATTCGCAGTCCGGATTTCACAAGGTGAACGAGATGGCAAGTGGAGTGCATCCATCTTCCAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 90 bp AGTAGAACTGGTTGTTGGTATAGCGACAATGAAGGCTTTGGAGTGTaGCCCCGGGCCTCTCCTGTTTGTGGCCCGGATTTTGAACAGATA +
Preference number: 5 (lower is better)
Translates to: SRTGCWYSDNEGFGV*PRASPVCGPDFEQI
Trigger: TATCTGTTCAAAATCCGGGCCACAAACAGGAGAGGCCCGGGGCCACACTCCAAAGCCTTCATTGTCGCTATACCAACAACCAGTTCTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 90 bp GTGTGGCAGCAGTGGTTGAGGGCATGGTGCTGGTCGGTGGCCTTGTaGTCTCAAATCCATAATCGTCATCGTATACAACATAGTCCTCTT +
Preference number: 5 (lower is better)
Translates to: VWQQWLRAWCWSVAL*SQIHNRHRIQHSPL
Trigger: AAGAGGACTATGTTGTATACGATGACGATTATGGATTTGAGACCACAAGGCCACCGACCAGCACCATGCCCTCAACCACTGCTGCCACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 90 bp CACTTGGAAATGGTCCAGCGCATCAGTCAGGGAGCACGGGGCTGTTaGGTCTTTACTGAGGTATGTGACATAAGGAGCAACAAATCTCCT +
Preference number: 5 (lower is better)
Translates to: HLEMVQRISQGARGC*VFTEVCDIRSNKSP
Trigger: AGGAGATTTGTTGCTCCTTATGTCACATACCTCAGTAAAGACCCAACAGCCCCGTGCTCCCTGACTGATGCGCTGGACCATTTCCAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 90 bp GGCAATGTTGTAATACTCCACCGGTCTACTGGAAGCATCTTTGGGTaGGTCCCATGTGACCTTCAGGCCCATGTTAGTGGACAGCAGTTT +
Preference number: 5 (lower is better)
Translates to: GNVVILHRSTGSIFG*VPCDLQAHVSGQQF
Trigger: AAACTGCTGTCCACTAACATGGGCCTGAAGGTCACATGGGACCCACCCAAAGATGCTTCCAGTAGACCGGTGGAGTATTACAACATTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp GGGTTGATGTCTCTGGAATGTGTGATTACAAACGATCAAAGTGCAGAGGCGAAGGTGACAACTGTGGGCTaGCCACTGACTGGCCAGACT +
Preference number: 5 (lower is better)
Translates to: GLMSLECVITNDQSAEAKVTTVG*PLTGQT
Trigger: AGTCTGGCCAGTCAGTGGCAAGCCCACAGTTGTCAC...CTTCGCCTCTGCACTTTGATCGTTTGTAATCACACATTCCAGAGACATCAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp TTTTGCCCAGAATCCCTAGCGCAGGTTAGTCACACAGGCTGGAAGGATGAACTTGCACAGTGGTGGTTGTaGTGGTTGGAAGCATGGTTG +
Preference number: 5 (lower is better)
Translates to: FCPESLAQVSHTGWKDELAQWWL*WLEAWL
Trigger: CAACCATGCTTCCAACCACAACAACCACCACTGTGC...AAGTTCATCCTTCCAGCCTGTGTGACTAACCTGCGCTAGGGATTCTGGGCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp TCCCAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCAGCAGTTTCACATGCCTaGGCTTCAGTGGGTGGTCAA +
Preference number: 5 (lower is better)
Translates to: SQSVQVLCLESLEITLDPAVSHA*ASVGGQ
Trigger: TTGACCACCCACTGAAGCCAAGGCATGTGAAACTGC...TGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239425.2
CDS TCA 90 bp GAAGGTGAGGGACTTTGCTCCAAACGGTTTGAGAGCCGGGGCGTATaGAAGAATGTATTCTTTCACTTTCCCCTCAGACTCTGGCAATGC +
Preference number: 5 (lower is better)
Translates to: EGEGLCSKRFESRGV*KNVFFHFPLRLWQC
Trigger: GCATTGCCAGAGTCTGAGGGGAAAGTGAAAGAATACATTCTTTCATACGCCCCGGCTCTCAAACCGTTTGGAGCAAAGTCCCTCACCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS TCA 90 bp AACCCACATAGTAATAGGGGGTTCCAAAACCAATGTGTCCAAAGCTaGCAGGCTCCTGGCGGTACTGGCGATAGTAGCCTTGAATGTTGG +
Preference number: 5 (lower is better)
Translates to: NPHSNRGFQNQCVQS*QAPGGTGDSSLECW
Trigger: CCAACATTCAAGGCTACTATCGCCAGTACCGCCAGGAGCCTGTCAGCTTTGGACACATTGGTTTTGGAACCCCCTATTACTATGTGGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 90 bp ATCGCCTTCCGGGGATGCTGTCTTCTTCCTGTACAAGTTGCCCAATaGCAGCCTTGTCTCTGTCAAGGTTCCTGTCTGCATATTTGTTGT +
Preference number: 5 (lower is better)
Translates to: IAFRGCCLLPVQVAQ*QPCLCQGSCLHICC
Trigger: ACAACAAATATGCAGACAGGAACCTTGACAGAGACAAGGCTGCCATTGGGCAACTTGTACAGGAAGAAGACAGCATCCCCGGAAGGCGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp TCTGGAAATCACACTGGATCCACTGCAGGGTTGATGTCTCTGGAATGTGTGATTCGCATACGCAAGGGCTaGTTGGGCACTTCCTTTTCC +
Preference number: 5 (lower is better)
Translates to: SGNHTGSTAGLMSLECVIRIRKG*LGTSFS
Trigger: GGAAAAGGAAGTGCCCAACAAGCCCTTGCGTATGCG...AATCACACATTCCAGAGACATCAACCCTGCAGTGGATCCAGTGTGATTTCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097425.10
CDS-3UTR CAA 90 bp CAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCACTGCATGACCAGATCTACTaGGTACCCTCAAGGGTTGCT +
Preference number: 5 (lower is better)
Translates to: QSVQVLCLESLEITLDPLHDQIY*VPSRVA
Trigger: AGCAACCCTTGAGGGTACCAAGTAGATCTGGTCATG...CAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp TTTTGCCCAGAATCCCTAGCGCAGGTTAGTCACACAGGCTGGAAGGATGAACTTGGTGGCAGAGGATGCTaGGAAGACGAGATCTTCTTT +
Preference number: 5 (lower is better)
Translates to: FCPESLAQVSHTGWKDELGGRGC*EDEIFF
Trigger: AAAGAAGATCTCGTCTTCCAAGCATCCTCTGCCACC...AAGTTCATCCTTCCAGCCTGTGTGACTAACCTGCGCTAGGGATTCTGGGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp TCTGTGAAGCCAGCAGAGCACGCCAGTGCTGTTCCCTGGAGATCCCAGAGTGTTGACAGAGAGTCTTCCTaGCCTTTTAAAATTCCTTCA +
Preference number: 5 (lower is better)
Translates to: SVKPAEHASAVPWRSQSVDRESS*PFKIPS
Trigger: TGAAGGAATTTTAAAAGGCAAGGAAGACTCTCTGTC...AACACTCTGGGATCTCCAGGGAACAGCACTGGCGTGCTCTGCTGGCTTCACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp TCCCAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCATTCTTCCTGTACAAGTaGCCCAATGGCAGCCTTGTC +
Preference number: 5 (lower is better)
Translates to: SQSVQVLCLESLEITLDPFFLYK*PNGSLV
Trigger: GACAAGGCTGCCATTGGGCAACTTGTACAGGAAGAA...TGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp AGAAGAGAGGAGCAAAGAGCATTCTGTGAAGCCAGCAGAGCACGCCAGTGCTGTGGCTTCTATATAAGATaGAGGCCCTGTTCTTCCATC +
Preference number: 5 (lower is better)
Translates to: RREEQRAFCEASRARQCCGFYIR*RPCSSI
Trigger: GATGGAAGAACAGGGCCTCAATCTTATATAGAAGCC...ACAGCACTGGCGTGCTCTGCTGGCTTCACAGAATGCTCTTTGCTCCTCTCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp CAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCACTGGTCAGGGGATCCTGCTaGATCATACTCATTTTGGTC +
Preference number: 5 (lower is better)
Translates to: QSVQVLCLESLEITLDPLVRGSC*IILILV
Trigger: GACCAAAATGAGTATGATCAAGCAGGATCCCCTGAC...CAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp GTTCAGACCAAGAAATGTGGCCAAATTCTGACTGAAGAGGCCCAAATGCCAGGTTTCTTCCTGTACAAGTaGCCCAATGGCAGCCTTGTC +
Preference number: 5 (lower is better)
Translates to: VQTKKCGQILTEEAQMPGFFLYK*PNGSLV
Trigger: GACAAGGCTGCCATTGGGCAACTTGTACAGGAAGAA...ACCTGGCATTTGGGCCTCTTCAGTCAGAATTTGGCCACATTTCTTGGTCTGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp AGATCCCAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATGAGTATGTGGTGGTTTaGATCACCTCCAAGCCCACT +
Preference number: 5 (lower is better)
Translates to: RSQSVQVLCLESLEITLDEYVVV*ITSKPT
Trigger: AGTGGGCTTGGAGGTGATCAAAACCACCACATACTC...ATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTGGGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp GTTCAGACCAAGAAATGTGGCCAAATTCTGACTGAAGAGGCCCAAATGCCAGGTGAGTATGTGGTGGTTTaGATCACCTCCAAGCCCACT +
Preference number: 5 (lower is better)
Translates to: VQTKKCGQILTEEAQMPGEYVVV*ITSKPT
Trigger: AGTGGGCTTGGAGGTGATCAAAACCACCACATACTC...ACCTGGCATTTGGGCCTCTTCAGTCAGAATTTGGCCACATTTCTTGGTCTGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp GGGTTGATGTCTCTGGAATGTGTGATTACAAACGATCAAAGTGCAGAGGCGAAGCGCATACGCAAGGGCTaGTTGGGCACTTCCTTTTCT +
Preference number: 5 (lower is better)
Translates to: GLMSLECVITNDQSAEAKRIRKG*LGTSFS
Trigger: AGAAAAGGAAGTGCCCAACAAGCCCTTGCGTATGCG...CTTCGCCTCTGCACTTTGATCGTTTGTAATCACACATTCCAGAGACATCAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp CACTGGATCCACTGCAGGGTTGATGTCTCTGGAATGTGTGATTACAAACGATCATCTGAGAGAGCATCCTaGACATTTTTGGCTGACGGC +
Preference number: 5 (lower is better)
Translates to: HWIHCRVDVSGMCDYKRSSERAS*TFLADG
Trigger: GCCGTCAGCCAAAAATGTCAAGGATGCTCTCTCAGA...TGATCGTTTGTAATCACACATTCCAGAGACATCAACCCTGCAGTGGATCCAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp CCAGAATCCCTAGCGCAGGTTAGTCACACAGGCTGGAAGGATGAACTTGCAGCAAGTAATACCTTGTGTTaGGCTTCAAGTTCTCAATGG +
Preference number: 5 (lower is better)
Translates to: PESLAQVSHTGWKDELAASNTLC*ASSSQW
Trigger: CCATTGAGAACTTGAAGCCAAACACAAGGTATTACT...TGCTGCAAGTTCATCCTTCCAGCCTGTGTGACTAACCTGCGCTAGGGATTCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp TCCCAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCAGGCTTCTATATAAGATaGAGGCCCTGTTCTTCCATC +
Preference number: 5 (lower is better)
Translates to: SQSVQVLCLESLEITLDPGFYIR*RPCSSI
Trigger: GATGGAAGAACAGGGCCTCAATCTTATATAGAAGCC...TGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp AGATCCCAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATAATGGTCCTGGACCCTaGATGGGAAAACCATCTATC +
Preference number: 5 (lower is better)
Translates to: RSQSVQVLCLESLEITLDNGPGP*MGKPSI
Trigger: GATAGATGGTTTTCCCATCAAGGGTCCAGGACCATT...ATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTGGGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000239425.2
CDS TCA 90 bp GGAGTGTGTCTCCGCATTCACCTTGATGGACTTAAGACTTTTCAGTaGCTTCCCATAGGCAATGTTGTAATACTCCACCGGTCTACTGGA +
Preference number: 5 (lower is better)
Translates to: GVCLRIHLDGLKTFQ*LPIGNVVILHRSTG
Trigger: TCCAGTAGACCGGTGGAGTATTACAACATTGCCTATGGGAAGTCACTGAAAAGTCTTAAGTCCATCAAGGTGAATGCGGAGACACACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 90 bp TCTCAAATCCATAATCGTCATCGTATACAACATAGTCCTCTTCTGTaGGTGGTGCAGTGTCAGTCTCCAGGCCTGAGAAGTCATCTTCCT +
Preference number: 5 (lower is better)
Translates to: SQIHNRHRIQHSPLL*VVQCQSPGLRSHLP
Trigger: AGGAAGATGACTTCTCAGGCCTGGAGACTGACACTGCACCACCCACAGAAGAGGACTATGTTGTATACGATGACGATTATGGATTTGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 90 bp CTTGTTGGGCACTTCCTTTTCTGTGACGGTCTCATTAAATGGTCCTaGACCCTTGATGGGAAAACCATCTATCTTGATCCATTCACCTCC +
Preference number: 5 (lower is better)
Translates to: LVGHFLFCDGLIKWS*TLDGKTIYLDPFTS
Trigger: GGAGGTGAATGGATCAAGATAGATGGTTTTCCCATCAAGGGTCCAGGACCATTTAATGAGACCGTCACAGAAAAGGAAGTGCCCAACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp GTTCAGACCAAGAAATGTGGCCAAATTCTGACTGAAGAGGCCCAAATGCCAGGTGTCTCCGCATTCACCTaGATGGACTTAAGACTTTTC +
Preference number: 5 (lower is better)
Translates to: VQTKKCGQILTEEAQMPGVSAFT*MDLRLF
Trigger: GAAAAGTCTTAAGTCCATCAAGGTGAATGCGGAGAC...ACCTGGCATTTGGGCCTCTTCAGTCAGAATTTGGCCACATTTCTTGGTCTGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp TTACAAACGATCAAAGTGCAGAGGCGAAGTGAAGTTTCAGCAAAACTGAATTGTGACCTGGCTGGATTCTaGGGAGATGACGGGGAAGAG +
Preference number: 5 (lower is better)
Translates to: LQTIKVQRRSEVSAKLNCDLAGF*GDDGEE
Trigger: CTCTTCCCCGTCATCTCCCAAGAATCCAGCCAGGTC...ACAATTCAGTTTTGCTGAAACTTCACTTCGCCTCTGCACTTTGATCGTTTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp GGGTTGATGTCTCTGGAATGTGTGATTACAAACGATCAAAGTGCAGAGGCGAAGGGAAAACCATCTATCTaGATCCATTCACCTCCGGGT +
Preference number: 5 (lower is better)
Translates to: GLMSLECVITNDQSAEAKGKPSI*IHSPPG
Trigger: ACCCGGAGGTGAATGGATCAAGATAGATGGTTTTCC...CTTCGCCTCTGCACTTTGATCGTTTGTAATCACACATTCCAGAGACATCAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp CAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCACTGCTATTAGTTCGGATTTaGTTCAAGTCTGAGAGAGCA +
Preference number: 5 (lower is better)
Translates to: QSVQVLCLESLEITLDPLLLVRI*FKSERA
Trigger: TGCTCTCTCAGACTTGAACAAAATCCGAACTAATAG...CAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp TTACAAACGATCAAAGTGCAGAGGCGAAGTGAAGTTTCAGCAAAACTGAATTGTGAGGACAGAGGGGATTaGCCTCCTGGATGTACATCC +
Preference number: 5 (lower is better)
Translates to: LQTIKVQRRSEVSAKLNCEDRGD*PPGCTS
Trigger: GGATGTACATCCAGGAGGCAAATCCCCTCTGTCCTC...ACAATTCAGTTTTGCTGAAACTTCACTTCGCCTCTGCACTTTGATCGTTTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp TCCCAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCAGACAGAGAGTCTTCCTaGCCTTTTAAAATTCCTTCA +
Preference number: 5 (lower is better)
Translates to: SQSVQVLCLESLEITLDPDRESS*PFKIPS
Trigger: TGAAGGAATTTTAAAAGGCAAGGAAGACTCTCTGTC...TGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp GGGTTGATGTCTCTGGAATGTGTGATTACAAACGATCAAAGTGCAGAGGCGAAGTGTTCTCGCCAACATTaGCCCTTCCATTATAACCTG +
Preference number: 5 (lower is better)
Translates to: GLMSLECVITNDQSAEAKCSRQH*PFHYNL
Trigger: CAGGTTATAATGGAAGGGCAAATGTTGGCGAGAACA...CTTCGCCTCTGCACTTTGATCGTTTGTAATCACACATTCCAGAGACATCAACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp AGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCACTGCAACCCACTTTGTTCCTaGAGGACCATTGATAATTCT +
Preference number: 5 (lower is better)
Translates to: RVFRFCAWRVWKSHWIHCNPLCS*RTIDNS
Trigger: AGAATTATCAATGGTCCTCAAGGAACAAAGTGGGTT...GCAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp TCCCAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCAAGTAATACCTTGTGTTaGGCTTCAAGTTCTCAATGG +
Preference number: 5 (lower is better)
Translates to: SQSVQVLCLESLEITLDPSNTLC*ASSSQW
Trigger: CCATTGAGAACTTGAAGCCAAACACAAGGTATTACT...TGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS TCA 90 bp AAAATTCCTTCATTTTCCTCTTCCTCCTCAGTGAAGACTGATTGCTaGGATTCGGGTGGCAGAGGATGCTTGGAAGACGAGATCTTCTTT +
Preference number: 5 (lower is better)
Translates to: KIPSFSSSSSVKTDC*DSGGRGCLEDEIFF
Trigger: AAAGAAGATCTCGTCTTCCAAGCATCCTCTGCCACCCGAATCTCAGCAATCAGTCTTCACTGAGGAGGAAGAGGAAAATGAAGGAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp TTTTGCCCAGAATCCCTAGCGCAGGTTAGTCACACAGGCTGGAAGGATGAACTTTTGATCATACTCATTTaGGTCCACAGAATCATTGTC +
Preference number: 5 (lower is better)
Translates to: FCPESLAQVSHTGWKDELLIILI*VHRIIV
Trigger: GACAATGATTCTGTGGACCAAAATGAGTATGATCAA...AAGTTCATCCTTCCAGCCTGTGTGACTAACCTGCGCTAGGGATTCTGGGCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp TTACAAACGATCAAAGTGCAGAGGCGAAGTGAAGTTTCAGCAAAACTGAATTGTCTTGGTCCGCGGAGTTaGGGGAATCTGCTTGGATTT +
Preference number: 5 (lower is better)
Translates to: LQTIKVQRRSEVSAKLNCLGPRS*GNLLGF
Trigger: AAATCCAAGCAGATTCCCCAAACTCCGCGGACCAAG...ACAATTCAGTTTTGCTGAAACTTCACTTCGCCTCTGCACTTTGATCGTTTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp TTACAAACGATCAAAGTGCAGAGGCGAAGTGAAGTTTCAGCAAAACTGAATTGTGCACAGTGGTGGTTGTaGTGGTTGGAAGCATGGTTG +
Preference number: 5 (lower is better)
Translates to: LQTIKVQRRSEVSAKLNCAQWWL*WLEAWL
Trigger: CAACCATGCTTCCAACCACAACAACCACCACTGTGC...ACAATTCAGTTTTGCTGAAACTTCACTTCGCCTCTGCACTTTGATCGTTTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp CAGAGTGTTCAGGTTTTGTGCCTGGAGAGTCTGGAAATCACACTGGATCCACTGATGAGGGTTTTTGGCTaGAACTTTGAAGTAATACCT +
Preference number: 5 (lower is better)
Translates to: QSVQVLCLESLEITLDPLMRVFG*NFEVIP
Trigger: AGGTATTACTTCAAAGTTCAAGCCAAAAACCCTCAT...CAGTGGATCCAGTGTGATTTCCAGACTCTCCAGGCACAAAACCTGAACACTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS TCA 90 bp TTCAACACCAAGCCGCGATCCAGGTCTACAACCCACTTTGTTCCTTaGGGACCATTGATAATTCTCTGTCCATTTGGTTTTCCAATACTA +
Preference number: 5 (lower is better)
Translates to: FNTKPRSRSTTHFVP*GPLIILCPFGFPIL
Trigger: TAGTATTGGAAAACCAAATGGACAGAGAATTATCAATGGTCCTCAAGGAACAAAGTGGGTTGTAGACCTGGATCGCGGCTTGGTGTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp CACTGGATCCACTGCAGGGTTGATGTCTCTGGAATGTGTGATTACAAACGATCACTATTAGTTCGGATTTaGTTCAAGTCTGAGAGAGCA +
Preference number: 5 (lower is better)
Translates to: HWIHCRVDVSGMCDYKRSLLVRI*FKSERA
Trigger: TGCTCTCTCAGACTTGAACAAAATCCGAACTAATAG...TGATCGTTTGTAATCACACATTCCAGAGACATCAACCCTGCAGTGGATCCAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp ATTGAGAATTTACAAATAAGATCTGAGGCACTTAGCCCAGTGATGGATAGGTCTCATGACCAGATCTACTaGGTACCCTCAAGGGTTGCT +
Preference number: 5 (lower is better)
Translates to: IENLQIRSEALSPVMDRSHDQIY*VPSRVA
Trigger: AGCAACCCTTGAGGGTACCAAGTAGATCTGGTCATG...AGACCTATCCATCACTGGGCTAAGTGCCTCAGATCTTATTTGTAAATTCTCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp TCTGGAAATCACACTGGATCCACTGCAGGGTTGATGTCTCTGGAATGTGTGATTAACCCACTTTGTTCCTaGAGGACCATTGATAATTCT +
Preference number: 5 (lower is better)
Translates to: SGNHTGSTAGLMSLECVINPLCS*RTIDNS
Trigger: AGAATTATCAATGGTCCTCAAGGAACAAAGTGGGTT...AATCACACATTCCAGAGACATCAACCCTGCAGTGGATCCAGTGTGATTTCCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp ATTGAGAATTTACAAATAAGATCTGAGGCACTTAGCCCAGTGATGGATAGGTCTGTCAGGGGATCCTGCTaGATCATACTCATTTTGGTC +
Preference number: 5 (lower is better)
Translates to: IENLQIRSEALSPVMDRSVRGSC*IILILV
Trigger: GACCAAAATGAGTATGATCAAGCAGGATCCCCTGAC...AGACCTATCCATCACTGGGCTAAGTGCCTCAGATCTTATTTGTAAATTCTCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp TTACAAACGATCAAAGTGCAGAGGCGAAGTGAAGTTTCAGCAAAACTGAATTGTTGTTCTCGCCAACATTaGCCCTTCCATTATAACCTG +
Preference number: 5 (lower is better)
Translates to: LQTIKVQRRSEVSAKLNCCSRQH*PFHYNL
Trigger: CAGGTTATAATGGAAGGGCAAATGTTGGCGAGAACA...ACAATTCAGTTTTGCTGAAACTTCACTTCGCCTCTGCACTTTGATCGTTTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS-3UTR CAA 90 bp TTACAAACGATCAAAGTGCAGAGGCGAAGTGAAGTTTCAGCAAAACTGAATTGTTTGATCATACTCATTTaGGTCCACAGAATCATTGTC +
Preference number: 5 (lower is better)
Translates to: LQTIKVQRRSEVSAKLNCLIILI*VHRIIV
Trigger: GACAATGATTCTGTGGACCAAAATGAGTATGATCAA...ACAATTCAGTTTTGCTGAAACTTCACTTCGCCTCTGCACTTTGATCGTTTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS TCA 72 bp CGGATGGGTCTCTCAGAGGCTCCCGAACGGCTGGGCTaGGGTCTGTTGCCACTGTTCCCTGACTGGGAGCCC +
Preference number: 6 (lower is better)
Translates to: RMGLSEAPERLG*GLLPLFPDWEP
Trigger: GGGCTCCCAGTCAGGGAACAGTGGCAACAGACCTCAGCCCAGCCGTTCGGGAGCCTCTGAGAGACCCATCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS GCA 72 bp AGATCTTCTTTGCTGGTGTGGCCTGGAGCCCAGCCCTaGCAGGAACCTGGACCCGTGGGTGGGTGCTGCCAG +
Preference number: 6 (lower is better)
Translates to: RSSLLVWPGAQP*QEPGPVGGCCQ
Trigger: CTGGCAGCACCCACCCACGGGTCCAGGTTCCTGGCAGGGCTGGGCTCCAGGCCACACCAGCAAAGAAGATCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 72 bp GCCCCAAGGCAGGCCGGGTCTGTTGGATCTGAGCAGTaGCCTCAGCTCGCCTTCTGGTGTCTCCTGCAGCTC +
Preference number: 6 (lower is better)
Translates to: APRQAGSVGSEQ*PQLAFWCLLQL
Trigger: GAGCTGCAGGAGACACCAGAAGGCGAGCTGAGGCCACTGCTCAGATCCAACAGACCCGGCCTGCCTTGGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS TCA 72 bp GCGTGGCGCCTTCCATGCAACGGACAGCCTGTCGTCTaGGGCTCGGACACGCATACGCAAGGGCTTGTTGGG +
Preference number: 6 (lower is better)
Translates to: AWRLPCNGQPVV*GSDTHTQGLVG
Trigger: CCCAACAAGCCCTTGCGTATGCGTGTCCGAGCCTCAGACGACAGGCTGTCCGTTGCATGGAAGGCGCCACGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097425.10
ENSMUST00000167580.8
ENSMUST00000239425.2
CDS GCA 72 bp GGCCCGGGTGGTATACCTTGGCCAGGAGTGCGTGCTTaGGCTGGGACTTGCAGTGACAGGGTTTCGAGGCTG +
Preference number: 6 (lower is better)
Translates to: GPGGIPWPGVRA*AGTCSDRVSRL
Trigger: CAGCCTCGAAACCCTGTCACTGCAAGTCCCAGCGCAAGCACGCACTCCTGGCCAAGGTATACCACCCGGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 72 bp AGTGCGGGTCGAGAGGATCCTCCCTGCAGTAGGGAATaGCTCCGGGGTTGGGCTGCAGCGCTGGAATCTTCC +
Preference number: 6 (lower is better)
Translates to: SAGREDPPCSRE*LRGWAAALESS
Trigger: GGAAGATTCCAGCGCTGCAGCCCAACCCCGGAGCCATTCCCTACTGCAGGGAGGATCCTCTCGACCCGCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS GCA 72 bp TCTCAGAGGCTCCCGAACGGCTGGGCTGAGGTCTGTTaGCACTGTTCCCTGACTGGGAGCCCATCTGCTGAG +
Preference number: 6 (lower is better)
Translates to: SQRLPNGWAEVC*HCSLTGSPSAE
Trigger: CTCAGCAGATGGGCTCCCAGTCAGGGAACAGTGGCAACAGACCTCAGCCCAGCCGTTCGGGAGCCTCTGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS GCA 72 bp GTGGAAGGGGCCCGGGTGGTATACCTTGGCCAGGAGTaGGTGCTTGCGCTGGGACTTGCAGTGACAGGGTTT +
Preference number: 6 (lower is better)
Translates to: VEGARVVYLGQE*VLALGLAVTGF
Trigger: AAACCCTGTCACTGCAAGTCCCAGCGCAAGCACGCACTCCTGGCCAAGGTATACCACCCGGGCCCCTTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS GCA 72 bp TCTGTAAACGGGGCGGCTCACTCCGCTGTGGTTCTCTaGGGTAACCAGCACGAAGTACACCACCCCCGGCTC +
Preference number: 6 (lower is better)
Translates to: SVNGAAHSAVVL*GNQHEVHHPRL
Trigger: GAGCCGGGGGTGGTGTACTTCGTGCTGGTTACCGCAGAGAACCACAGCGGAGTGAGCCGCCCCGTTTACAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000239425.2
CDS CCA 72 bp GCAGTAGGGAATGGCTCCGGGGTTGGGCTGCAGCGCTaGAATCTTCCTCGCTGGTGGAAGAATGGGACTGGC +
Preference number: 6 (lower is better)
Translates to: AVGNGSGVGLQR*NLPRWWKNGTG
Trigger: GCCAGTCCCATTCTTCCACCAGCGAGGAAGATTCCAGCGCTGCAGCCCAACCCCGGAGCCATTCCCTACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 72 bp GAGGATCCTCCCTGCAGTAGGGAATGGCTCCGGGGTTaGGCTGCAGCGCTGGAATCTTCCTCGCTGGTGGAA +
Preference number: 6 (lower is better)
Translates to: EDPPCSREWLRG*AAALESSSLVE
Trigger: TTCCACCAGCGAGGAAGATTCCAGCGCTGCAGCCCAACCCCGGAGCCATTCCCTACTGCAGGGAGGATCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 72 bp GGGATGGGTTCCTTCCGGTACAAGCTGGCCCCTCTCTaGGAGCCTCTTCTCAGAGTGTCTGAGCCCCCAGAG +
Preference number: 6 (lower is better)
Translates to: GMGSFRYKLAPL*EPLLRVSEPPE
Trigger: CTCTGGGGGCTCAGACACTCTGAGAAGAGGCTCCCAGAGAGGGGCCAGCTTGTACCGGAAGGAACCCATCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 72 bp TGCTTGGAAGACGAGATCTTCTTTGCTGGTGTGGCCTaGAGCCCAGCCCTGCCAGGAACCTGGACCCGTGGG +
Preference number: 6 (lower is better)
Translates to: CLEDEIFFAGVA*SPALPGTWTRG
Trigger: CCCACGGGTCCAGGTTCCTGGCAGGGCTGGGCTCCAGGCCACACCAGCAAAGAAGATCTCGTCTTCCAAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 72 bp TTGGTGTCGTGGAAGAGTAGGTGGAAGGGGCCCGGGTaGTATACCTTGGCCAGGAGTGCGTGCTTGCGCTGG +
Preference number: 6 (lower is better)
Translates to: LVSWKSRWKGPG*YTLARSACLRW
Trigger: CCAGCGCAAGCACGCACTCCTGGCCAAGGTATACCACCCGGGCCCCTTCCACCTACTCTTCCACGACACCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CAA 72 bp GTGCGACCATCTCCCCCGAGTCTCACCCGGAGAGGGTaGCCATGTGAGTCTTGCAGGTACCGCCCTTCTGCA +
Preference number: 6 (lower is better)
Translates to: VRPSPPSLTRRG*PCESCRYRPSA
Trigger: TGCAGAAGGGCGGTACCTGCAAGACTCACATGGCAACCCTCTCCGGGTGAGACTCGGGGGAGATGGTCGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CAA 90 bp GACAGCCTGTCGTCTGAGGCTCGGACACGCATACGCAAGGGCTTGTaGGGCACTTCCTTTTCTGGGGGTCCTGCTGAGGTAGCCACCGGT +
Preference number: 6 (lower is better)
Translates to: DSLSSEARTRIRKGL*GTSFSGGPAEVATG
Trigger: ACCGGTGGCTACCTCAGCAGGACCCCCAGAAAAGGAAGTGCCCAACAAGCCCTTGCGTATGCGTGTCCGAGCCTCAGACGACAGGCTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000167580.8
CDS CAA 90 bp ACGGACAGCCTGTCGTCTGAGGCTCGGACACGCATACGCAAGGGCTaGTTGGGCACTTCCTTTTCTGGGGGTCCTGCTGAGGTAGCCACC +
Preference number: 6 (lower is better)
Translates to: TDSLSSEARTRIRKG*LGTSFSGGPAEVAT
Trigger: GGTGGCTACCTCAGCAGGACCCCCAGAAAAGGAAGTGCCCAACAAGCCCTTGCGTATGCGTGTCCGAGCCTCAGACGACAGGCTGTCCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000167580.8
CDS TCA 72 bp CTAAAGTGCCCCAAGGCAGGCCGGGTCTGTTGGATCTaGGCAGTGGCCTCAGCTCGCCTTCTGGTGTCTCCT +
Preference number: 6 (lower is better)
Translates to: LKCPKAGRVCWI*AVASARLLVSP
Trigger: AGGAGACACCAGAAGGCGAGCTGAGGCCACTGCTCAGATCCAACAGACCCGGCCTGCCTTGGGGCACTTTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS TCA 72 bp TGGCAGCGAAGGAGCCCTGGTGAGGACTTTCGAGGCTaGGGTAGACTGGGGAGACCTAGAGGGCTGAAGCCT +
Preference number: 6 (lower is better)
Translates to: WQRRSPGEDFRG*GRLGRPRGLKP
Trigger: AGGCTTCAGCCCTCTAGGTCTCCCCAGTCTACCTCAGCCTCGAAAGTCCTCACCAGGGCTCCTTCGCTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS GCA 72 bp TGCGACCATCTCCCCCGAGTCTCACCCGGAGAGGGTTaGCATGTGAGTCTTGCAGGTACCGCCCTTCTGCAT +
Preference number: 6 (lower is better)
Translates to: CDHLPRVSPGEG*HVSLAGTALLH
Trigger: ATGCAGAAGGGCGGTACCTGCAAGACTCACATGGCAACCCTCTCCGGGTGAGACTCGGGGGAGATGGTCGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS GCA 72 bp TCCTGGGCACTGGCCACAGGTTTGCCATGTCTCCCCTaGCCAAAGAGGGGGAGGCCATCAGGACTCACCATA +
Preference number: 6 (lower is better)
Translates to: SWALATGLPCLP*PKRGRPSGLTI
Trigger: TATGGTGAGTCCTGATGGCCTCCCCCTCTTTGGGCAGGGGAGACATGGCAAACCTGTGGCCAGTGCCCAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 72 bp AGCCCAGAAGAAAACCCCGAGATCTTCGTGGGCTCTTaGCTCCAGACAGGCGTGGCGCCTTCCATGCAACGG +
Preference number: 6 (lower is better)
Translates to: SPEENPEIFVGS*LQTGVAPSMQR
Trigger: CCGTTGCATGGAAGGCGCCACGCCTGTCTGGAGCCAAGAGCCCACGAAGATCTCGGGGTTTTCTTCTGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000097425.10
ENSMUST00000167580.8
ENSMUST00000239425.2
CDS CCA 72 bp CCCTATAGACGGGCTGACTCTGCCCCTGGGAGTTCGTaGACTGCAGGGACACCACATACACCGACTCAGAGG +
Preference number: 6 (lower is better)
Translates to: PYRRADSAPGSS*TAGTPHTPTQR
Trigger: CCTCTGAGTCGGTGTATGTGGTGTCCCTGCAGTCCACGAACTCCCAGGGGCAGAGTCAGCCCGTCTATAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097425.10
ENSMUST00000167580.8
ENSMUST00000239425.2
CDS CCA 72 bp TCCGGGGTTGGGCTGCAGCGCTGGAATCTTCCTCGCTaGTGGAAGAATGGGACTGGCTCGATGCGGATGATG +
Preference number: 6 (lower is better)
Translates to: SGVGLQRWNLPR*WKNGTGSMRMM
Trigger: CATCATCCGCATCGAGCCAGTCCCATTCTTCCACCAGCGAGGAAGATTCCAGCGCTGCAGCCCAACCCCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 72 bp TGGATGGGGTGGTATCCTTGGCGTGAGCGGAGTGAGTaGGAGCCCGAGGGTCTGGGCCTTCAATTTCAGTGC +
Preference number: 6 (lower is better)
Translates to: WMGWYPWRERSE*EPEGLGLQFQC
Trigger: GCACTGAAATTGAAGGCCCAGACCCTCGGGCTCCCACTCACTCCGCTCACGCCAAGGATACCACCCCATCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 72 bp GCTGCATCCGCTGCCGCAAAGACAGCATTGGTGTCGTaGAAGAGTAGGTGGAAGGGGCCCGGGTGGTATACC +
Preference number: 6 (lower is better)
Translates to: AASAAAKTALVS*KSRWKGPGWYT
Trigger: GGTATACCACCCGGGCCCCTTCCACCTACTCTTCCACGACACCAATGCTGTCTTTGCGGCAGCGGATGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 72 bp GAACCTACGCTGCATCCGCTGCCGCAAAGACAGCATTaGTGTCGTGGAAGAGTAGGTGGAAGGGGCCCGGGT +
Preference number: 6 (lower is better)
Translates to: EPTLHPLPQRQH*CRGRVGGRGPG
Trigger: ACCCGGGCCCCTTCCACCTACTCTTCCACGACACCAATGCTGTCTTTGCGGCAGCGGATGCAGCGTAGGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CAA 72 bp CGGGTGGCAGAGGATGCTTGGAAGACGAGATCTTCTTaGCTGGTGTGGCCTGGAGCCCAGCCCTGCCAGGAA +
Preference number: 6 (lower is better)
Translates to: RVAEDAWKTRSS*LVWPGAQPCQE
Trigger: TTCCTGGCAGGGCTGGGCTCCAGGCCACACCAGCAAAGAAGATCTCGTCTTCCAAGCATCCTCTGCCACCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CAA 90 bp GGTGTCTGGGATCAGGCTGTCCACCAGGACACGCCTGTTAGAGACTaGCTTGTAATCCCACCTGGCCGACTCCCCCTTCTCGCGGTAACG +
Preference number: 6 (lower is better)
Translates to: GVWDQAVHQDTPVRD*LVIPPGRLPLLAVT
Trigger: CGTTACCGCGAGAAGGGGGAGTCGGCCAGGTGGGATTACAAGCAAGTCTCTAACAGGCGTGTCCTGGTGGACAGCCTGATCCCAGACACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CAA 90 bp TCCACGATGGTGCGACCATCTCCCCCGAGTCTCACCCGGAGAGGGTaGCCATGTGAGTCTTGCAGGTACCGCCCTTCTGCATTCAACACC +
Preference number: 6 (lower is better)
Translates to: STMVRPSPPSLTRRG*PCESCRYRPSAFNT
Trigger: GGTGTTGAATGCAGAAGGGCGGTACCTGCAAGACTCACATGGCAACCCTCTCCGGGTGAGACTCGGGGGAGATGGTCGCACCATCGTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CAA 90 bp CCTCCGAGACTCAAGATGGGTTTATCCTGGGCACTGGCCACAGGTTaGCCATGTCTCCCCTGCCCAAAGAGGGGGAGGCCATCAGGACTC +
Preference number: 6 (lower is better)
Translates to: PPRLKMGLSWALATG*PCLPCPKRGRPSGL
Trigger: GAGTCCTGATGGCCTCCCCCTCTTTGGGCAGGGGAGACATGGCAAACCTGTGGCCAGTGCCCAGGATAAACCCATCTTGAGTCTCGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS TCA 72 bp TGGATGTCTAGCAGGGGACAGCTGGCGGCTGGTGGATaGTGGAGGTGTTTGAGGAGCACCCTCATCCGTGCT +
Preference number: 6 (lower is better)
Translates to: WMSSRGQLAAGG*WRCLRSTLIRA
Trigger: AGCACGGATGAGGGTGCTCCTCAAACACCTCCATCATCCACCAGCCGCCAGCTGTCCCCTGCTAGACATCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS GCA 72 bp CCGAGTCTCACCCGGAGAGGGTTGCCATGTGAGTCTTaGAGGTACCGCCCTTCTGCATTCAACACCAAGCCG +
Preference number: 6 (lower is better)
Translates to: PSLTRRGLPCES*RYRPSAFNTKP
Trigger: CGGCTTGGTGTTGAATGCAGAAGGGCGGTACCTGCAAGACTCACATGGCAACCCTCTCCGGGTGAGACTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 72 bp CCAGGATACGGTGACAACTGTGGGCTTGCCACTGACTaGCCAGACTCTCAGGTTCTCAGGTGCAGTGGTGGG +
Preference number: 6 (lower is better)
Translates to: PGYGDNCGLATD*PDSQVLRCSGG
Trigger: CCCACCACTGCACCTGAGAACCTGAGAGTCTGGCCAGTCAGTGGCAAGCCCACAGTTGTCACCGTATCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 72 bp GGGGTTGGGCTGCAGCGCTGGAATCTTCCTCGCTGGTaGAAGAATGGGACTGGCTCGATGCGGATGATGATG +
Preference number: 6 (lower is better)
Translates to: GVGLQRWNLPRW*KNGTGSMRMMM
Trigger: CATCATCATCCGCATCGAGCCAGTCCCATTCTTCCACCAGCGAGGAAGATTCCAGCGCTGCAGCCCAACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 72 bp TCCATAGACATCAGAGCCAGGCCTAGTGTGGGATGCTaGCAGCGAAGGAGCCCTGGTGAGGACTTTCGAGGC +
Preference number: 6 (lower is better)
Translates to: SIDIRARPSVGC*QRRSPGEDFRG
Trigger: GCCTCGAAAGTCCTCACCAGGGCTCCTTCGCTGCCAGCATCCCACACTAGGCCTGGCTCTGATGTCTATGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 72 bp CCCAGGGGGACAAGTAGGAGAAGGGGTGGTAGGTTCTaGAGTGGTGGTAGTGGTCGTTGTCCTGCGAGTAGC +
Preference number: 6 (lower is better)
Translates to: PRGTSRRRGGRF*SGGSGRCPASS
Trigger: GCTACTCGCAGGACAACGACCACTACCACCACTCCAGAACCTACCACCCCTTCTCCTACTTGTCCCCCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 72 bp GTGGACAGCAGTTTCACATGCCTTGGCTTCAGTGGGTaGTCAACTGGGGGTCCTGCTGAGGTAGCCACCGGT +
Preference number: 6 (lower is better)
Translates to: VDSSFTCLGFSG*STGGPAEVATG
Trigger: ACCGGTGGCTACCTCAGCAGGACCCCCAGTTGACCACCCACTGAAGCCAAGGCATGTGAAACTGCTGTCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000239425.2
CDS CAA 72 bp CTCAAGATGGGTTTATCCTGGGCACTGGCCACAGGTTaGCCATGTCTCCCCTGCCCAAAGAGGGGGAGGCCA +
Preference number: 6 (lower is better)
Translates to: LKMGLSWALATG*PCLPCPKRGRP
Trigger: TGGCCTCCCCCTCTTTGGGCAGGGGAGACATGGCAAACCTGTGGCCAGTGCCCAGGATAAACCCATCTTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CAA 72 bp CTGTCGTCTGAGGCTCGGACACGCATACGCAAGGGCTaGTTGGGCACTTCCTTTTCTGGGGGTCCTGCTGAG +
Preference number: 6 (lower is better)
Translates to: LSSEARTRIRKG*LGTSFSGGPAE
Trigger: CTCAGCAGGACCCCCAGAAAAGGAAGTGCCCAACAAGCCCTTGCGTATGCGTGTCCGAGCCTCAGACGACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000167580.8
CDS CAA 90 bp GCATGGCGGCTAGGGACGGAAGTTAGCCTGGACCTGGCTGGATTCTaGGGAGATGACGGGGAAGAGACAGCTTTAGGGTCAGGGGATCCT +
Preference number: 6 (lower is better)
Translates to: AWRLGTEVSLDLAGF*GDDGEETALGSGDP
Trigger: AGGATCCCCTGACCCTAAAGCTGTCTCTTCCCCGTCATCTCCCAAGAATCCAGCCAGGTCCAGGCTAACTTCCGTCCCTAGCCGCCATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CAA 90 bp CTCGGAGCCCTCTGTCAGGGCAGAGGGACGAGAAGAGCTGACAGTTaGGGAAGGCATACGGGAACTAGAGGCATGGACATCCTGGCGATC +
Preference number: 6 (lower is better)
Translates to: LGALCQGRGTRRADS*GRHTGTRGMDILAI
Trigger: GATCGCCAGGATGTCCATGCCTCTAGTTCCCGTATGCCTTCCCAAACTGTCAGCTCTTCTCGTCCCTCTGCCCTGACAGAGGGCTCCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CAA 90 bp TCAGACTCTGGCAATGCGTCCCAGGATACGGTGACAACTGTGGGCTaGCCACTGACTGGCCAGACTCTCAGGTTCTCAGGTGCAGTGGTG +
Preference number: 6 (lower is better)
Translates to: SDSGNASQDTVTTVG*PLTGQTLRFSGAVV
Trigger: CACCACTGCACCTGAGAACCTGAGAGTCTGGCCAGTCAGTGGCAAGCCCACAGTTGTCACCGTATCCTGGGACGCATTGCCAGAGTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS TCA 72 bp TCCACAAGAGGATCCACCCAGGCCACGAGCACGGACTaGGACGACATGACCCGGACACTAATGTCTTCAGGC +
Preference number: 6 (lower is better)
Translates to: STRGSTQATSTD*DDMTRTLMSSG
Trigger: GCCTGAAGACATTAGTGTCCGGGTCATGTCGTCTCAGTCCGTGCTCGTGGCCTGGGTGGATCCTCTTGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS TCA 72 bp CACTGTTCCCTGACTGGGAGCCCATCTGCTGAGGTTTaGGAATGGATGGGGTGGTATCCTTGGCGTGAGCGG +
Preference number: 6 (lower is better)
Translates to: HCSLTGSPSAEV*EWMGWYPWRER
Trigger: CCGCTCACGCCAAGGATACCACCCCATCCATTCTCAAACCTCAGCAGATGGGCTCCCAGTCAGGGAACAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS TCA 72 bp CGAACGGCTGGGCTGAGGTCTGTTGCCACTGTTCCCTaGCTGGGAGCCCATCTGCTGAGGTTTGAGAATGGA +
Preference number: 6 (lower is better)
Translates to: RTAGLRSVATVP*LGAHLLRFENG
Trigger: TCCATTCTCAAACCTCAGCAGATGGGCTCCCAGTCAGGGAACAGTGGCAACAGACCTCAGCCCAGCCGTTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS TCA 72 bp ATCTCCCCCGAGTCTCACCCGGAGAGGGTTGCCATGTaGGTCTTGCAGGTACCGCCCTTCTGCATTCAACAC +
Preference number: 6 (lower is better)
Translates to: ISPESHPERVAM*VLQVPPFCIQH
Trigger: GTGTTGAATGCAGAAGGGCGGTACCTGCAAGACTCACATGGCAACCCTCTCCGGGTGAGACTCGGGGGAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS GCA 72 bp CTTGCCACTGACTGGCCAGACTCTCAGGTTCTCAGGTaGAGTGGTGGGAGCCGATTCTGGCGTTCTCTGGAA +
Preference number: 6 (lower is better)
Translates to: LATDWPDSQVLR*SGGSRFWRSLE
Trigger: TTCCAGAGAACGCCAGAATCGGCTCCCACCACTGCACCTGAGAACCTGAGAGTCTGGCCAGTCAGTGGCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS GCA 72 bp TCAAGATGGGTTTATCCTGGGCACTGGCCACAGGTTTaGCATGTCTCCCCTGCCCAAAGAGGGGGAGGCCAT +
Preference number: 6 (lower is better)
Translates to: SRWVYPGHWPQV*HVSPAQRGGGH
Trigger: ATGGCCTCCCCCTCTTTGGGCAGGGGAGACATGGCAAACCTGTGGCCAGTGCCCAGGATAAACCCATCTTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS GCA 72 bp GTTGTCCTGCGAGTAGCTCGAATTGTAGTTGTGGGATaGCTGGTAGTGGTTGTGCGGCGGGTGGTTGTGCGG +
Preference number: 6 (lower is better)
Translates to: VVLRVARIVVVG*LVVVVRRVVVR
Trigger: CCGCACAACCACCCGCCGCACAACCACTACCAGGCATCCCACAACTACAATTCGAGCTACTCGCAGGACAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 72 bp TCTGTTGGATCTGAGCAGTGGCCTCAGCTCGCCTTCTaGTGTCTCCTGCAGCTCTGTCAATATCCGCCCCAC +
Preference number: 6 (lower is better)
Translates to: SVGSEQWPQLAF*CLLQLCQYPPH
Trigger: GTGGGGCGGATATTGACAGAGCTGCAGGAGACACCAGAAGGCGAGCTGAGGCCACTGCTCAGATCCAACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 72 bp GTACATCCGCTCCAGCAGCTTTGGAGTTTTCTGGGATaGGTTCCTTCCGGTACAAGCTGGCCCCTCTCTGGG +
Preference number: 6 (lower is better)
Translates to: VHPLQQLWSFLG*VPSGTSWPLSG
Trigger: CCCAGAGAGGGGCCAGCTTGTACCGGAAGGAACCCATCCCAGAAAACTCCAAAGCTGCTGGAGCGGATGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 72 bp GCGGGCGGTCAGGCCCGGTGTGAGCAAGAGACAACTTaGGCTGGGAAAGTGACCTATCTTTGCTCTGAGAAC +
Preference number: 6 (lower is better)
Translates to: AGGQARCEQETT*AGKVTYLCSEN
Trigger: GTTCTCAGAGCAAAGATAGGTCACTTTCCCAGCCCAAGTTGTCTCTTGCTCACACCGGGCCTGACCGCCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 72 bp AAGGGCTTCCCTCCGAGACTCAAGATGGGTTTATCCTaGGCACTGGCCACAGGTTTGCCATGTCTCCCCTGC +
Preference number: 6 (lower is better)
Translates to: KGFPPRLKMGLS*ALATGLPCLPC
Trigger: GCAGGGGAGACATGGCAAACCTGTGGCCAGTGCCCAGGATAAACCCATCTTGAGTCTCGGAGGGAAGCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CAA 72 bp GATCAGGCTGTCCACCAGGACACGCCTGTTAGAGACTaGCTTGTAATCCCACCTGGCCGACTCCCCCTTCTC +
Preference number: 6 (lower is better)
Translates to: DQAVHQDTPVRD*LVIPPGRLPLL
Trigger: GAGAAGGGGGAGTCGGCCAGGTGGGATTACAAGCAAGTCTCTAACAGGCGTGTCCTGGTGGACAGCCTGATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CAA 72 bp GGCAATGCGTCCCAGGATACGGTGACAACTGTGGGCTaGCCACTGACTGGCCAGACTCTCAGGTTCTCAGGT +
Preference number: 6 (lower is better)
Translates to: GNASQDTVTTVG*PLTGQTLRFSG
Trigger: ACCTGAGAACCTGAGAGTCTGGCCAGTCAGTGGCAAGCCCACAGTTGTCACCGTATCCTGGGACGCATTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CAA 90 bp CTTATTCCGTATCAAACTAAAGTGCCCCAAGGCAGGCCGGGTCTGTaGGATCTGAGCAGTGGCCTCAGCTCGCCTTCTGGTGTCTCCTGC +
Preference number: 6 (lower is better)
Translates to: LIPYQTKVPQGRPGL*DLSSGLSSPSGVSC
Trigger: GCAGGAGACACCAGAAGGCGAGCTGAGGCCACTGCTCAGATCCAACAGACCCGGCCTGCCTTGGGGCACTTTAGTTTGATACGGAATAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS TCA 72 bp CTGTTGCCACTGTTCCCTGACTGGGAGCCCATCTGCTaGGGTTTGAGAATGGATGGGGTGGTATCCTTGGCG +
Preference number: 6 (lower is better)
Translates to: LLPLFPDWEPIC*GLRMDGVVSLA
Trigger: CGCCAAGGATACCACCCCATCCATTCTCAAACCTCAGCAGATGGGCTCCCAGTCAGGGAACAGTGGCAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS GCA 72 bp AGGGCTGAAGCCTTGGTCCGCGGAGTTTGGGGAATCTaGTTGGATTTCTGCTGTGGGCAGGGAAGGGCTTAT +
Preference number: 6 (lower is better)
Translates to: RAEALVRGVWGI*LDFCCGQGRAY
Trigger: ATAAGCCCTTCCCTGCCCACAGCAGAAATCCAAGCAGATTCCCCAAACTCCGCGGACCAAGGCTTCAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS GCA 72 bp GTTGAAAGCCCTGAGCCTTGGAGGACAGAGGGGATTTaGCTCCTGGATGTACATCCGCTCCAGCAGCTTTGG +
Preference number: 6 (lower is better)
Translates to: VESPEPWRTEGI*LLDVHPLQQLW
Trigger: CCAAAGCTGCTGGAGCGGATGTACATCCAGGAGGCAAATCCCCTCTGTCCTCCAAGGCTCAGGGCTTTCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 72 bp TCTCAGGTTCTCAGGTGCAGTGGTGGGAGCCGATTCTaGCGTTCTCTGGAAGATGGATGCACTCCACTTGCC +
Preference number: 6 (lower is better)
Translates to: SQVLRCSGGSRF*RSLEDGCTPLA
Trigger: GGCAAGTGGAGTGCATCCATCTTCCAGAGAACGCCAGAATCGGCTCCCACCACTGCACCTGAGAACCTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 72 bp CTGAAGCCTTGGTCCGCGGAGTTTGGGGAATCTGCTTaGATTTCTGCTGTGGGCAGGGAAGGGCTTATTCCG +
Preference number: 6 (lower is better)
Translates to: LKPWSAEFGESA*ISAVGREGLIP
Trigger: CGGAATAAGCCCTTCCCTGCCCACAGCAGAAATCCAAGCAGATTCCCCAAACTCCGCGGACCAAGGCTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 72 bp TGGAGTTTTCTGGGATGGGTTCCTTCCGGTACAAGCTaGCCCCTCTCTGGGAGCCTCTTCTCAGAGTGTCTG +
Preference number: 6 (lower is better)
Translates to: WSFLGWVPSGTS*PLSGSLFSECL
Trigger: CAGACACTCTGAGAAGAGGCTCCCAGAGAGGGGCCAGCTTGTACCGGAAGGAACCCATCCCAGAAAACTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 72 bp TCCCTCCGAGACTCAAGATGGGTTTATCCTGGGCACTaGCCACAGGTTTGCCATGTCTCCCCTGCCCAAAGA +
Preference number: 6 (lower is better)
Translates to: SLRDSRWVYPGH*PQVCHVSPAQR
Trigger: TCTTTGGGCAGGGGAGACATGGCAAACCTGTGGCCAGTGCCCAGGATAAACCCATCTTGAGTCTCGGAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 72 bp CCAAGCCCACTAAGGGCTTCCCTCCGAGACTCAAGATaGGTTTATCCTGGGCACTGGCCACAGGTTTGCCAT +
Preference number: 6 (lower is better)
Translates to: PSPLRASLRDSR*VYPGHWPQVCH
Trigger: ATGGCAAACCTGTGGCCAGTGCCCAGGATAAACCCATCTTGAGTCTCGGAGGGAAGCCCTTAGTGGGCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 72 bp CCTTCGGTGTGGCAGCAGTGGTTGAGGGCATGGTGCTaGTCGGTGGCCTTGTGGTCTCAAATCCATAATCGT +
Preference number: 6 (lower is better)
Translates to: PSVWQQWLRAWC*SVALWSQIHNR
Trigger: ACGATTATGGATTTGAGACCACAAGGCCACCGACCAGCACCATGCCCTCAACCACTGCTGCCACACCGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CAA 72 bp TATCAAACTAAAGTGCCCCAAGGCAGGCCGGGTCTGTaGGATCTGAGCAGTGGCCTCAGCTCGCCTTCTGGT +
Preference number: 6 (lower is better)
Translates to: YQTKVPQGRPGL*DLSSGLSSPSG
Trigger: ACCAGAAGGCGAGCTGAGGCCACTGCTCAGATCCAACAGACCCGGCCTGCCTTGGGGCACTTTAGTTTGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CAA 72 bp GCTGAAGCCTTGGTCCGCGGAGTTTGGGGAATCTGCTaGGATTTCTGCTGTGGGCAGGGAAGGGCTTATTCC +
Preference number: 6 (lower is better)
Translates to: AEALVRGVWGIC*DFCCGQGRAYS
Trigger: GGAATAAGCCCTTCCCTGCCCACAGCAGAAATCCAAGCAGATTCCCCAAACTCCGCGGACCAAGGCTTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CAA 90 bp GATGCGGATGATGATGATGCCTTTGTACCCGGCTGCATCCGGCTTTaGTCTCTGAGCATGTTAGAAGCCGCATGGCGGCTAGGGACGGAA +
Preference number: 6 (lower is better)
Translates to: DADDDDAFVPGCIRL*SLSMLEAAWRLGTE
Trigger: TTCCGTCCCTAGCCGCCATGCGGCTTCTAACATGCTCAGAGACAAAAGCCGGATGCAGCCGGGTACAAAGGCATCATCATCATCCGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS TCA 72 bp GTCCTGGCTGGAGTCCTACCAGGAGTCAGAACCCCATaGCCAGATCTACTTGGTACCCTCAAGGGTTGCTTC +
Preference number: 6 (lower is better)
Translates to: VLAGVLPGVRTP*PDLLGTLKGCF
Trigger: GAAGCAACCCTTGAGGGTACCAAGTAGATCTGGTCATGGGGTTCTGACTCCTGGTAGGACTCCAGCCAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS TCA 72 bp TCCATGGCGACCACAGTAATGTTCCGGGGAGCGTGCTaGGGAGGCAGATCACTCTTTGTCAGGTCGTTTGGA +
Preference number: 6 (lower is better)
Translates to: SMATTVMFRGAC*GGRSLFVRSFG
Trigger: TCCAAACGACCTGACAAAGAGTGATCTGCCTCCTCAGCACGCTCCCCGGAACATTACTGTGGTCGCCATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS TCA 72 bp GCCGACCATGGCAATCAGTGTAGCCAGGATCATGCTTaGAAGCGAATGGGATCCAGATGGGCTCACCACCTG +
Preference number: 6 (lower is better)
Translates to: ADHGNQCSQDHA*KRMGSRWAHHL
Trigger: CAGGTGGTGAGCCCATCTGGATCCCATTCGCTTTCAAGCATGATCCTGGCTACACTGATTGCCATGGTCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS GCA 72 bp GAGGAAGCTGCAACTTTGGGAGCTGGGGAAGAAGGCTaGTGCAGTTTCTCAGGTTTCCTGCTGCTGTCTCTC +
Preference number: 6 (lower is better)
Translates to: EEAATLGAGEEG*CSFSGFLLLSL
Trigger: GAGAGACAGCAGCAGGAAACCTGAGAAACTGCAGCAGCCTTCTTCCCCAGCTCCCAAAGTTGCAGCTTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS GCA 72 bp ACCTTCAGGCCCATGTTAGTGGACAGCAGTTTCACATaGCTTGGCTTCAGTGGGTGGTCAACTGGGGGTCCT +
Preference number: 6 (lower is better)
Translates to: TFRPMLVDSSFT*LGFSGWSTGGP
Trigger: AGGACCCCCAGTTGACCACCCACTGAAGCCAAGGCATGTGAAACTGCTGTCCACTAACATGGGCCTGAAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000239425.2
CDS CCA 72 bp GGTTGTTGGTATAGCGACAATGAAGGCTTTGGAGTGTaGCCCCGGGCCTCTCCTGTTTGTGGCCCGGATTTT +
Preference number: 6 (lower is better)
Translates to: GCWYSDNEGFGV*PRASPVCGPDF
Trigger: AAAATCCGGGCCACAAACAGGAGAGGCCCGGGGCCACACTCCAAAGCCTTCATTGTCGCTATACCAACAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 72 bp GCGCTGGAATCTTCCTCGCTGGTGGAAGAATGGGACTaGCTCGATGCGGATGATGATGATGCCTTTGTACCC +
Preference number: 6 (lower is better)
Translates to: ALESSSLVEEWD*LDADDDDAFVP
Trigger: GGGTACAAAGGCATCATCATCATCCGCATCGAGCCAGTCCCATTCTTCCACCAGCGAGGAAGATTCCAGCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 72 bp GCTGCAGCGCTGGAATCTTCCTCGCTGGTGGAAGAATaGGACTGGCTCGATGCGGATGATGATGATGCCTTT +
Preference number: 6 (lower is better)
Translates to: AAALESSSLVEE*DWLDADDDDAF
Trigger: AAAGGCATCATCATCATCCGCATCGAGCCAGTCCCATTCTTCCACCAGCGAGGAAGATTCCAGCGCTGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 72 bp CTGACAGTTTGGGAAGGCATACGGGAACTAGAGGCATaGACATCCTGGCGATCCCTAGAAAGTGCGGGTCGA +
Preference number: 6 (lower is better)
Translates to: LTVWEGIRELEA*TSWRSLESAGR
Trigger: TCGACCCGCACTTTCTAGGGATCGCCAGGATGTCCATGCCTCTAGTTCCCGTATGCCTTCCCAAACTGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 72 bp CACCCTCATCCGTGCTCAGTTGAAAGCCCTGAGCCTTaGAGGACAGAGGGGATTTGCCTCCTGGATGTACAT +
Preference number: 6 (lower is better)
Translates to: HPHPCSVESPEP*RTEGICLLDVH
Trigger: ATGTACATCCAGGAGGCAAATCCCCTCTGTCCTCCAAGGCTCAGGGCTTTCAACTGAGCACGGATGAGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 72 bp GCAATCAGTGTAGCCAGGATCATGCTTGAAAGCGAATaGGATCCAGATGGGCTCACCACCTGGTGGCCTCAC +
Preference number: 6 (lower is better)
Translates to: AISVARIMLESE*DPDGLTTWWPH
Trigger: GTGAGGCCACCAGGTGGTGAGCCCATCTGGATCCCATTCGCTTTCAAGCATGATCCTGGCTACACTGATTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CAA 72 bp CTAGGGACGGAAGTTAGCCTGGACCTGGCTGGATTCTaGGGAGATGACGGGGAAGAGACAGCTTTAGGGTCA +
Preference number: 6 (lower is better)
Translates to: LGTEVSLDLAGF*GDDGEETALGS
Trigger: TGACCCTAAAGCTGTCTCTTCCCCGTCATCTCCCAAGAATCCAGCCAGGTCCAGGCTAACTTCCGTCCCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CAA 90 bp ACGGACAGCCTGTCGTCTGAGGCTCGGACACGCATACGCAAGGGCTaGTTGGGCACTTCCTTTTCCACGTCCTTAATAAGGAAGGAGTGT +
Preference number: 6 (lower is better)
Translates to: TDSLSSEARTRIRKG*LGTSFSTSLIRKEC
Trigger: ACACTCCTTCCTTATTAAGGACGTGGAAAAGGAAGTGCCCAACAAGCCCTTGCGTATGCGTGTCCGAGCCTCAGACGACAGGCTGTCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097425.10
CDS TCA 72 bp GAGGATCTTCAAGGGAATCCAGTTCCTCCTCGCCAGTaGCTTCTGTGGACTGCGGATCCAGCTCTCCCATTT +
Preference number: 6 (lower is better)
Translates to: EDLQGNPVPPRQ*LLWTADPALPF
Trigger: AAATGGGAGAGCTGGATCCGCAGTCCACAGAAGTCACTGGCGAGGAGGAACTGGATTCCCTTGAAGATCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 72 bp ATGGTCCAGCGCATCAGTCAGGGAGCACGGGGCTGTTaGGTCTTTACTGAGGTATGTGACATAAGGAGCAAC +
Preference number: 6 (lower is better)
Translates to: MVQRISQGARGC*VFTEVCDIRSN
Trigger: GTTGCTCCTTATGTCACATACCTCAGTAAAGACCCAACAGCCCCGTGCTCCCTGACTGATGCGCTGGACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 72 bp GGGATGGCTTTGTTCCAGTCCACAATGACAAAGGAGTaGCAGCCTTCCATGGCGACCACAGTAATGTTCCGG +
Preference number: 6 (lower is better)
Translates to: GMALFQSTMTKE*QPSMATTVMFR
Trigger: CCGGAACATTACTGTGGTCGCCATGGAAGGCTGCCACTCCTTTGTCATTGTGGACTGGAACAAAGCCATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CAA 72 bp CTGTCGTCTGAGGCTCGGACACGCATACGCAAGGGCTaGTTGGGCACTTCCTTTTCCACGTCCTTAATAAGG +
Preference number: 6 (lower is better)
Translates to: LSSEARTRIRKG*LGTSFSTSLIR
Trigger: CCTTATTAAGGACGTGGAAAAGGAAGTGCCCAACAAGCCCTTGCGTATGCGTGTCCGAGCCTCAGACGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097425.10
CDS CAA 72 bp TCGCCTTCCGGGGATGCTGTCTTCTTCCTGTACAAGTaGCCCAATGGCAGCCTTGTCTCTGTCAAGGTTCCT +
Preference number: 6 (lower is better)
Translates to: SPSGDAVFFLYK*PNGSLVSVKVP
Trigger: AGGAACCTTGACAGAGACAAGGCTGCCATTGGGCAACTTGTACAGGAAGAAGACAGCATCCCCGGAAGGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CAA 72 bp CAGGTCGTTTGGAATGAGTTCATCCAGGCTTTCCACTaGGAAATGGTCCAGCGCATCAGTCAGGGAGCACGG +
Preference number: 6 (lower is better)
Translates to: QVVWNEFIQAFH*EMVQRISQGAR
Trigger: CCGTGCTCCCTGACTGATGCGCTGGACCATTTCCAAGTGGAAAGCCTGGATGAACTCATTCCAAACGACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CAA 72 bp CTGTCGTCTGAGGCTCGGACACGCATACGCAAGGGCTaGTTGGGCACTTCCTTTTCTGTGACGGTCTCATTA +
Preference number: 6 (lower is better)
Translates to: LSSEARTRIRKG*LGTSFSVTVSL
Trigger: TAATGAGACCGTCACAGAAAAGGAAGTGCCCAACAAGCCCTTGCGTATGCGTGTCCGAGCCTCAGACGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239425.2
CDS CAA 90 bp TGGCTGGAGTCCTACCAGGAGTCAGAACCCCATGACCAGATCTACTaGGTACCCTCAAGGGTTGCTTCTGATTTAGGGTCTCCAACCGTG +
Preference number: 6 (lower is better)
Translates to: WLESYQESEPHDQIY*VPSRVASDLGSPTV
Trigger: CACGGTTGGAGACCCTAAATCAGAAGCAACCCTTGAGGGTACCAAGTAGATCTGGTCATGGGGTTCTGACTCCTGGTAGGACTCCAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CAA 90 bp CCGGGGATGCTGTCTTCTTCCTGTACAAGTTGCCCAATGGCAGCCTaGTCTCTGTCAAGGTTCCTGTCTGCATATTTGTTGTTCCGGGGG +
Preference number: 6 (lower is better)
Translates to: PGMLSSSCTSCPMAA*SLSRFLSAYLLFRG
Trigger: CCCCCGGAACAACAAATATGCAGACAGGAACCTTGACAGAGACAAGGCTGCCATTGGGCAACTTGTACAGGAAGAAGACAGCATCCCCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CAA 90 bp ACTCTTTGTCAGGTCGTTTGGAATGAGTTCATCCAGGCTTTCCACTaGGAAATGGTCCAGCGCATCAGTCAGGGAGCACGGGGCTGTTGG +
Preference number: 6 (lower is better)
Translates to: TLCQVVWNEFIQAFH*EMVQRISQGARGCW
Trigger: CCAACAGCCCCGTGCTCCCTGACTGATGCGCTGGACCATTTCCAAGTGGAAAGCCTGGATGAACTCATTCCAAACGACCTGACAAAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS TCA 72 bp CCTCTTCTCAGAGTGTCTGAGCCCCCAGAGATTGGATaGCTGGAAGAGGAAGGTGTACGATCGTTGACCACA +
Preference number: 6 (lower is better)
Translates to: PLLRVSEPPEIG*LEEEGVRSLTT
Trigger: TGTGGTCAACGATCGTACACCTTCCTCTTCCAGTCATCCAATCTCTGGGGGCTCAGACACTCTGAGAAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS TCA 72 bp TATGTTCTCGCCAACATTTGCCCTTCCATTATAACCTaGTGTAAGCACTGGTCTCGGCGGAGGCTGGCGGGA +
Preference number: 6 (lower is better)
Translates to: YVLANICPSIIT*CKHWSRRRLAG
Trigger: TCCCGCCAGCCTCCGCCGAGACCAGTGCTTACATCAGGTTATAATGGAAGGGCAAATGTTGGCGAGAACATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS GCA 72 bp ACTAATGTCTTCAGGCACGTCCAGCTCATCCTCTTCTaGATGCTTGCGCTTTGTGAGGGCAGCCCTATAGAC +
Preference number: 6 (lower is better)
Translates to: TNVFRHVQLILF*MLALCEGSPID
Trigger: GTCTATAGGGCTGCCCTCACAAAGCGCAAGCATGCAGAAGAGGATGAGCTGGACGTGCCTGAAGACATTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097425.10
ENSMUST00000167580.8
ENSMUST00000239425.2
CDS GCA 72 bp CTCGATGCGGATGATGATGATGCCTTTGTACCCGGCTaGATCCGGCTTTTGTCTCTGAGCATGTTAGAAGCC +
Preference number: 6 (lower is better)
Translates to: LDADDDDAFVPG*IRLLSLSMLEA
Trigger: GGCTTCTAACATGCTCAGAGACAAAAGCCGGATGCAGCCGGGTACAAAGGCATCATCATCATCCGCATCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS GCA 72 bp TTGGTCCGCGGAGTTTGGGGAATCTGCTTGGATTTCTaGTGTGGGCAGGGAAGGGCTTATTCCGTATCAAAC +
Preference number: 6 (lower is better)
Translates to: LVRGVWGICLDF*CGQGRAYSVSN
Trigger: GTTTGATACGGAATAAGCCCTTCCCTGCCCACAGCAGAAATCCAAGCAGATTCCCCAAACTCCGCGGACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 72 bp GGAAGAGGAAGGTGTACGATCGTTGACCACAGTGGCTaGAAGTGGCTCTTCATCCTCACCATCTCCATAGAC +
Preference number: 6 (lower is better)
Translates to: GRGRCTIVDHSG*KWLFILTISID
Trigger: GTCTATGGAGATGGTGAGGATGAAGAGCCACTTCCAGCCACTGTGGTCAACGATCGTACACCTTCCTCTTCC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 72 bp GGTTGTGGTGGTCAGCACAGTGGTGGTTGTTGTGGTTaGAAGCATGGTTGTGGTAGGAGAGTATGTGGTGGT +
Preference number: 6 (lower is better)
Translates to: GCGGQHSGGCCG*KHGCGRRVCGG
Trigger: ACCACCACATACTCTCCTACCACAACCATGCTTCCAACCACAACAACCACCACTGTGCTGACCACCACAACC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 72 bp TTTGGAATGAGTTCATCCAGGCTTTCCACTTGGAAATaGTCCAGCGCATCAGTCAGGGAGCACGGGGCTGTT +
Preference number: 6 (lower is better)
Translates to: FGMSSSRLSTWK*SSASVREHGAV
Trigger: AACAGCCCCGTGCTCCCTGACTGATGCGCTGGACCATTTCCAAGTGGAAAGCCTGGATGAACTCATTCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 72 bp GTAATACTCCACCGGTCTACTGGAAGCATCTTTGGGTaGGTCCCATGTGACCTTCAGGCCCATGTTAGTGGA +
Preference number: 6 (lower is better)
Translates to: VILHRSTGSIFG*VPCDLQAHVSG
Trigger: TCCACTAACATGGGCCTGAAGGTCACATGGGACCCACCCAAAGATGCTTCCAGTAGACCGGTGGAGTATTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239425.2
CDS CAA 72 bp TCGTCTGAGGCTCGGACACGCATACGCAAGGGCTTGTaGGGCACTTCCTTTTCCACGTCCTTAATAAGGAAG +
Preference number: 6 (lower is better)
Translates to: SSEARTRIRKGL*GTSFSTSLIRK
Trigger: CTTCCTTATTAAGGACGTGGAAAAGGAAGTGCCCAACAAGCCCTTGCGTATGCGTGTCCGAGCCTCAGACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097425.10
CDS CAA 72 bp GATTTGCCTCCTGGATGTACATCCGCTCCAGCAGCTTaGGAGTTTTCTGGGATGGGTTCCTTCCGGTACAAG +
Preference number: 6 (lower is better)
Translates to: DLPPGCTSAPAA*EFSGMGSFRYK
Trigger: CTTGTACCGGAAGGAACCCATCCCAGAAAACTCCAAAGCTGCTGGAGCGGATGTACATCCAGGAGGCAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CAA 72 bp AATGGTCCTGGACCCTTGATGGGAAAACCATCTATCTaGATCCATTCACCTCCGGGTGGGCTCTCAGCTCTG +
Preference number: 6 (lower is better)
Translates to: NGPGPLMGKPSI*IHSPPGGLSAL
Trigger: CAGAGCTGAGAGCCCACCCGGAGGTGAATGGATCAAGATAGATGGTTTTCCCATCAAGGGTCCAGGACCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239425.2
CDS TCA 72 bp GATGGATGCACTCCACTTGCCATCTCGTTCACCTTGTaGAATCCGGACTGCGAATTCATACACGGTGTCTGG +
Preference number: 6 (lower is better)
Translates to: DGCTPLAISFTL*NPDCEFIHGVW
Trigger: CCAGACACCGTGTATGAATTCGCAGTCCGGATTTCACAAGGTGAACGAGATGGCAAGTGGAGTGCATCCATC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS TCA 72 bp AGATTGGATGACTGGAAGAGGAAGGTGTACGATCGTTaGCCACAGTGGCTGGAAGTGGCTCTTCATCCTCAC +
Preference number: 6 (lower is better)
Translates to: RLDDWKRKVYDR*PQWLEVALHPH
Trigger: GTGAGGATGAAGAGCCACTTCCAGCCACTGTGGTCAACGATCGTACACCTTCCTCTTCCAGTCATCCAATCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS TCA 72 bp GTCATCTTCCTCGGGGTAGCACTCTGGAATCCCATTTaGGCCCATTATAAGGTTGCCAGCTTCATCCTGGTG +
Preference number: 6 (lower is better)
Translates to: VIFLGVALWNPI*AHYKVASFILV
Trigger: CACCAGGATGAAGCTGGCAACCTTATAATGGGCTCAAATGGGATTCCAGAGTGCTACCCCGAGGAAGATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS TCA 72 bp AGTAATAGGGGGTTCCAAAACCAATGTGTCCAAAGCTaGCAGGCTCCTGGCGGTACTGGCGATAGTAGCCTT +
Preference number: 6 (lower is better)
Translates to: SNRGFQNQCVQS*QAPGGTGDSSL
Trigger: AAGGCTACTATCGCCAGTACCGCCAGGAGCCTGTCAGCTTTGGACACATTGGTTTTGGAACCCCCTATTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 72 bp TTCTCAGGTTTCCTGCTGCTGTCTCTCCCATTTGGCTaGGCACTGGCCTCAGTAGAACTGGTTGTTGGTATA +
Preference number: 6 (lower is better)
Translates to: FSGFLLLSLPFG*ALASVELVVGI
Trigger: TATACCAACAACCAGTTCTACTGAGGCCAGTGCCCAGCCAAATGGGAGAGACAGCAGCAGGAAACCTGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 72 bp CCGCGGAGTTTGGGGAATCTGCTTGGATTTCTGCTGTaGGCAGGGAAGGGCTTATTCCGTATCAAACTAAAG +
Preference number: 6 (lower is better)
Translates to: PRSLGNLLGFLL*AGKGLFRIKLK
Trigger: CTTTAGTTTGATACGGAATAAGCCCTTCCCTGCCCACAGCAGAAATCCAAGCAGATTCCCCAAACTCCGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CAA 72 bp CAGCAGTGGTTGAGGGCATGGTGCTGGTCGGTGGCCTaGTGGTCTCAAATCCATAATCGTCATCGTATACAA +
Preference number: 6 (lower is better)
Translates to: QQWLRAWCWSVA*WSQIHNRHRIQ
Trigger: TTGTATACGATGACGATTATGGATTTGAGACCACAAGGCCACCGACCAGCACCATGCCCTCAACCACTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CAA 72 bp TCGTCTGAGGCTCGGACACGCATACGCAAGGGCTTGTaGGGCACTTCCTTTTCTGTGACGGTCTCATTAAAT +
Preference number: 6 (lower is better)
Translates to: SSEARTRIRKGL*GTSFSVTVSLN
Trigger: ATTTAATGAGACCGTCACAGAAAAGGAAGTGCCCAACAAGCCCTTGCGTATGCGTGTCCGAGCCTCAGACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239425.2
CDS CAA 90 bp GGCACTTCCTTTTCTGTGACGGTCTCATTAAATGGTCCTGGACCCTaGATGGGAAAACCATCTATCTTGATCCATTCACCTCCGGGTGGG +
Preference number: 6 (lower is better)
Translates to: GTSFSVTVSLNGPGP*MGKPSILIHSPPGG
Trigger: CCCACCCGGAGGTGAATGGATCAAGATAGATGGTTTTCCCATCAAGGGTCCAGGACCATTTAATGAGACCGTCACAGAAAAGGAAGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000239425.2
CDS TCA 72 bp TCATTTTCCTCTTCCTCCTCAGTGAAGACTGATTGCTaGGATTCGGGTGGCAGAGGATGCTTGGAAGACGAG +
Preference number: 6 (lower is better)
Translates to: SFSSSSSVKTDC*DSGGRGCLEDE
Trigger: CTCGTCTTCCAAGCATCCTCTGCCACCCGAATCTCAGCAATCAGTCTTCACTGAGGAGGAAGAGGAAAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 72 bp CAGTGGTTGAGGGCATGGTGCTGGTCGGTGGCCTTGTaGTCTCAAATCCATAATCGTCATCGTATACAACAT +
Preference number: 6 (lower is better)
Translates to: QWLRAWCWSVAL*SQIHNRHRIQH
Trigger: ATGTTGTATACGATGACGATTATGGATTTGAGACCACAAGGCCACCGACCAGCACCATGCCCTCAACCACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CAA 72 bp TCCTACCAGGAGTCAGAACCCCATGACCAGATCTACTaGGTACCCTCAAGGGTTGCTTCTGATTTAGGGTCT +
Preference number: 6 (lower is better)
Translates to: SYQESEPHDQIY*VPSRVASDLGS
Trigger: AGACCCTAAATCAGAAGCAACCCTTGAGGGTACCAAGTAGATCTGGTCATGGGGTTCTGACTCCTGGTAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CAA 72 bp GTAGCCTTGAATGTTGGGGAGGGCTTCTATATAAGATaGAGGCCCTGTTCTTCCATCCAGGTGCGAATCCAC +
Preference number: 6 (lower is better)
Translates to: VALNVGEGFYIR*RPCSSIQVRIH
Trigger: GTGGATTCGCACCTGGATGGAAGAACAGGGCCTCAATCTTATATAGAAGCCCTCCCCAACATTCAAGGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CAA 90 bp CTGGCGATAGTAGCCTTGAATGTTGGGGAGGGCTTCTATATAAGATaGAGGCCCTGTTCTTCCATCCAGGTGCGAATCCACAAACTGACA +
Preference number: 6 (lower is better)
Translates to: LAIVALNVGEGFYIR*RPCSSIQVRIHKLT
Trigger: TGTCAGTTTGTGGATTCGCACCTGGATGGAAGAACAGGGCCTCAATCTTATATAGAAGCCCTCCCCAACATTCAAGGCTACTATCGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 72 bp CATAATCGTCATCGTATACAACATAGTCCTCTTCTGTaGGTGGTGCAGTGTCAGTCTCCAGGCCTGAGAAGT +
Preference number: 6 (lower is better)
Translates to: HNRHRIQHSPLL*VVQCQSPGLRS
Trigger: ACTTCTCAGGCCTGGAGACTGACACTGCACCACCCACAGAAGAGGACTATGTTGTATACGATGACGATTATG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 72 bp GTGCTGAGGAGGCAGATCACTCTTTGTCAGGTCGTTTaGAATGAGTTCATCCAGGCTTTCCACTTGGAAATG +
Preference number: 6 (lower is better)
Translates to: VLRRQITLCQVV*NEFIQAFHLEM
Trigger: CATTTCCAAGTGGAAAGCCTGGATGAACTCATTCCAAACGACCTGACAAAGAGTGATCTGCCTCCTCAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CAA 72 bp TGTCCAGAGAAGGTGAGGGACTTTGCTCCAAACGGTTaGAGAGCCGGGGCGTATGAAAGAATGTATTCTTTC +
Preference number: 6 (lower is better)
Translates to: CPEKVRDFAPNG*RAGAYERMYSF
Trigger: GAAAGAATACATTCTTTCATACGCCCCGGCTCTCAAACCGTTTGGAGCAAAGTCCCTCACCTTCTCTGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CAA 90 bp AGAGACAGCTTTAGGGTCAGGGGATCCTGCTTGATCATACTCATTTaGGTCCACAGAATCATTGTCTATAGAGCTGAGCTGGTGGTAGGC +
Preference number: 6 (lower is better)
Translates to: RDSFRVRGSCLIILI*VHRIIVYRAELVVG
Trigger: GCCTACCACCAGCTCAGCTCTATAGACAATGATTCTGTGGACCAAAATGAGTATGATCAAGCAGGATCCCCTGACCCTAAAGCTGTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS TCA 72 bp AATTCCTTCATTTTCCTCTTCCTCCTCAGTGAAGACTaGTTGCTGAGATTCGGGTGGCAGAGGATGCTTGGA +
Preference number: 6 (lower is better)
Translates to: NSFIFLFLLSED*LLRFGWQRMLG
Trigger: TCCAAGCATCCTCTGCCACCCGAATCTCAGCAATCAGTCTTCACTGAGGAGGAAGAGGAAAATGAAGGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 72 bp GTTGGGCACTTCCTTTTCTGTGACGGTCTCATTAAATaGTCCTGGACCCTTGATGGGAAAACCATCTATCTT +
Preference number: 6 (lower is better)
Translates to: VGHFLFCDGLIK*SWTLDGKTIYL
Trigger: AAGATAGATGGTTTTCCCATCAAGGGTCCAGGACCATTTAATGAGACCGTCACAGAAAAGGAAGTGCCCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000239425.2
CDS CAA 72 bp CAAGCCGCGATCCAGGTCTACAACCCACTTTGTTCCTaGAGGACCATTGATAATTCTCTGTCCATTTGGTTT +
Preference number: 6 (lower is better)
Translates to: QAAIQVYNPLCS*RTIDNSLSIWF
Trigger: AAACCAAATGGACAGAGAATTATCAATGGTCCTCAAGGAACAAAGTGGGTTGTAGACCTGGATCGCGGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS TCA 72 bp AAGCCGCGATCCAGGTCTACAACCCACTTTGTTCCTTaGGGACCATTGATAATTCTCTGTCCATTTGGTTTT +
Preference number: 6 (lower is better)
Translates to: KPRSRSTTHFVP*GPLIILCPFGF
Trigger: AAAACCAAATGGACAGAGAATTATCAATGGTCCTCAAGGAACAAAGTGGGTTGTAGACCTGGATCGCGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CCA 72 bp CACTTCCTTTTCTGTGACGGTCTCATTAAATGGTCCTaGACCCTTGATGGGAAAACCATCTATCTTGATCCA +
Preference number: 6 (lower is better)
Translates to: HFLFCDGLIKWS*TLDGKTIYLDP
Trigger: TGGATCAAGATAGATGGTTTTCCCATCAAGGGTCCAGGACCATTTAATGAGACCGTCACAGAAAAGGAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000239425.2
CDS CAA 72 bp AGGACTGACAGGCCCATAGCCATGAGGGTTTTTGGCTaGAACTTTGAAGTAATACCTTGTGTTTGGCTTCAA +
Preference number: 6 (lower is better)
Translates to: RTDRPIAMRVFG*NFEVIPCVWLQ
Trigger: TTGAAGCCAAACACAAGGTATTACTTCAAAGTTCAAGCCAAAAACCCTCATGGCTATGGGCCTGTCAGTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CAA 90 bp ATTCAACACCAAGCCGCGATCCAGGTCTACAACCCACTTTGTTCCTaGAGGACCATTGATAATTCTCTGTCCATTTGGTTTTCCAATACT +
Preference number: 6 (lower is better)
Translates to: IQHQAAIQVYNPLCS*RTIDNSLSIWFSNT
Trigger: AGTATTGGAAAACCAAATGGACAGAGAATTATCAATGGTCCTCAAGGAACAAAGTGGGTTGTAGACCTGGATCGCGGCTTGGTGTTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CAA 72 bp TTTTCTGTGACGGTCTCATTAAATGGTCCTGGACCCTaGATGGGAAAACCATCTATCTTGATCCATTCACCT +
Preference number: 6 (lower is better)
Translates to: FSVTVSLNGPGP*MGKPSILIHSP
Trigger: AGGTGAATGGATCAAGATAGATGGTTTTCCCATCAAGGGTCCAGGACCATTTAATGAGACCGTCACAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000239425.2
CDS CAA 72 bp CTTAGAGAATTACAAAGAACGACTCCCACAAACTTTTaGTACCATGTTCGTTTCACATACTGCCGACCATGG +
Preference number: 6 (lower is better)
Translates to: LRELQRTTPTNF*YHVRFTYCRPW
Trigger: CCATGGTCGGCAGTATGTGAAACGAACATGGTACAAAAAGTTTGTGGGAGTCGTTCTTTGTAATTCTCTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2
CDS CAA 90 bp ATCTTATACCTTAGAGAATTACAAAGAACGACTCCCACAAACTTTTaGTACCATGTTCGTTTCACATACTGCCGACCATGGCAATCAGTG +
Preference number: 6 (lower is better)
Translates to: ILYLRELQRTTPTNF*YHVRFTYCRPWQSV
Trigger: CACTGATTGCCATGGTCGGCAGTATGTGAAACGAACATGGTACAAAAAGTTTGTGGGAGTCGTTCTTTGTAATTCTCTAAGGTATAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097425.10
ENSMUST00000239425.2