Pregenerated sensors for FND3C2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073012Ensembl transcript IDs: ENSMUST00000091282.5
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CTTTGCCATGCCCGGAGTGATGCTTATAAGTTGAGAAAAGAGCACTaGGACTATATGGCCCCCACAGCTCTTGAAGACCATTGGAGGTTT | + |
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Preference number: 5 (lower is better) Translates to: LCHARSDAYKLRKEH*DYMAPTALEDHWRF Trigger: AAACCTCCAATGGTCTTCAAGAGCTGTGGGGGCCATATAGTCCCAGTGCTCTTTTCTCAACTTATAAGCATCACTCCGGGCATGGCAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091282.5 |
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| CDS GCA 90 bp | GAATTGTCAATACATCTGAAGGACGGCTTTGGCCTGCAGGTGATGTaGAAAAGACTCTCAGTTTATATGTGGTGGCTGCTTGGAGGTCAT | + |
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Preference number: 5 (lower is better) Translates to: ELSIHLKDGFGLQVM*KRLSVYMWWLLGGH Trigger: ATGACCTCCAAGCAGCCACCACATATAAACTGAGAGTCTTTTGCACATCACCTGCAGGCCAAAGCCGTCCTTCAGATGTATTGACAATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091282.5 |
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| CDS CCA 90 bp | GGCTTTGGCCTGCAGGTGATGTGCAAAAGACTCTCAGTTTATATGTaGTGGCTGCTTGGAGGTCATTATACAGAAATTCCTGTTGAGTGC | + |
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Preference number: 5 (lower is better) Translates to: GFGLQVMCKRLSVYM*WLLGGHYTEIPVEC Trigger: GCACTCAACAGGAATTTCTGTATAATGACCTCCAAGCAGCCACCACATATAAACTGAGAGTCTTTTGCACATCACCTGCAGGCCAAAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091282.5 |
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| CDS TCA 90 bp | CTTGAAGACCATTGGAGGTTTCATATCGGCGTCCTGCACAGACCTTaGAGCGATAGCGTGAATTTGCATGATAGTTGGAAAAGGAAAAGG | + |
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Preference number: 5 (lower is better) Translates to: LEDHWRFHIGVLHRP*SDSVNLHDSWKRKR Trigger: CCTTTTCCTTTTCCAACTATCATGCAAATTCACGCTATCGCTTCAAGGTCTGTGCAGGACGCCGATATGAAACCTCCAATGGTCTTCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091282.5 |
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| CDS CCA 90 bp | GTTGTTATTCAGTGGATGAACTTTAGGTGCTTTCAGTGCAGTGGGTaGGGACTTTGTAGTAGTGAAAGTGTAGATGTCAGACTCTGGTCC | + |
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Preference number: 5 (lower is better) Translates to: VVIQWMNFRCFQCSG*GLCSSESVDVRLWS Trigger: GGACCAGAGTCTGACATCTACACTTTCACTACTACAAAGTCCCCACCCACTGCACTGAAAGCACCTAAAGTTCATCCACTGAATAACAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091282.5 |
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| CDS GCA 90 bp | TCCAGATTGCAGGCAAAAATCCGAAACTTGTATGTAGTATTTCTCTaGAGATTTCGTACGGTGCAGGTGAGGTCTTCTCCATCATATGCA | + |
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Preference number: 5 (lower is better) Translates to: SRLQAKIRNLYVVFL*RFRTVQVRSSPSYA Trigger: TGCATATGATGGAGAAGACCTCACCTGCACCGTACGAAATCTGCAGAGAAATACTACATACAAGTTTCGGATTTTTGCCTGCAATCTGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091282.5 |
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| CDS GCA 90 bp | CTCACAACAGTTGTTATTCAGTGGATGAACTTTAGGTGCTTTCAGTaGAGTGGGTGGGGACTTTGTAGTAGTGAAAGTGTAGATGTCAGA | + |
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Preference number: 5 (lower is better) Translates to: LTTVVIQWMNFRCFQ*SGWGLCSSESVDVR Trigger: TCTGACATCTACACTTTCACTACTACAAAGTCCCCACCCACTGCACTGAAAGCACCTAAAGTTCATCCACTGAATAACAACTGTTGTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091282.5 |
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| CDS GCA 90 bp | CCATTTGATCTCACAACAGTTGTTATTCAGTGGATGAACTTTAGGTaGTTTCAGTGCAGTGGGTGGGGACTTTGTAGTAGTGAAAGTGTA | + |
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Preference number: 5 (lower is better) Translates to: PFDLTTVVIQWMNFR*FQCSGWGLCSSESV Trigger: TACACTTTCACTACTACAAAGTCCCCACCCACTGCACTGAAAGCACCTAAAGTTCATCCACTGAATAACAACTGTTGTGAGATCAAATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091282.5 |
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| CDS CCA 90 bp | AAACTTCTAGGCTGTAACTTGAAATGTTCATTCCACCGTTGTCTTTaGGCAAGTCCCATCCAATTGTCACTTGGTGTGCATGAATCATTC | + |
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Preference number: 5 (lower is better) Translates to: KLLGCNLKCSFHRCL*ASPIQLSLGVHESF Trigger: GAATGATTCATGCACACCAAGTGACAATTGGATGGGACTTGCCCAAAGACAACGGTGGAATGAACATTTCAAGTTACAGCCTAGAAGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091282.5 |
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| CDS CCA 90 bp | TCCAGTGTTGACTTGAAGACAGTAAATAATGGGATCACCTTCAATTaGCTCCAAAGACTCCCATTTGATCTCACAACAGTTGTTATTCAG | + |
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Preference number: 5 (lower is better) Translates to: SSVDLKTVNNGITFN*LQRLPFDLTTVVIQ Trigger: CTGAATAACAACTGTTGTGAGATCAAATGGGAGTCTTTGGAGCCAATTGAAGGTGATCCCATTATTTACTGTCTTCAAGTCAACACTGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091282.5 |
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| CDS TCA 90 bp | AGGGCCTATAATACTGTTATTGATGTCAGTGTAAAAGCCTGCATTTaGGGTAGAAATGATTGTGGCATGAGCAGAAGAACTAGTGATTCT | + |
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Preference number: 5 (lower is better) Translates to: RAYNTVIDVSVKACI*GRNDCGMSRRTSDS Trigger: AGAATCACTAGTTCTTCTGCTCATGCCACAATCATTTCTACCTCAAATGCAGGCTTTTACACTGACATCAATAACAGTATTATAGGCCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091282.5 |
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| CDS TCA 90 bp | GTTCCGTTCTCTGTATTGTGTTCTTTCAGTGATGCATTTGACGACTaGCTCTTCTTTTGGTTTTCACCTAATATCTGCTTATTGTCTCCA | + |
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Preference number: 5 (lower is better) Translates to: VPFSVLCSFSDAFDD*LFFWFSPNICLLSP Trigger: TGGAGACAATAAGCAGATATTAGGTGAAAACCAAAAGAAGAGTCAGTCGTCAAATGCATCACTGAAAGAACACAATACAGAGAACGGAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091282.5 |
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| CDS CAA 72 bp | GAAAAGAGCACTGGGACTATATGGCCCCCACAGCTCTaGAAGACCATTGGAGGTTTCATATCGGCGTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: EKSTGTIWPPQL*KTIGGFISASC Trigger: GCAGGACGCCGATATGAAACCTCCAATGGTCTTCAAGAGCTGTGGGGGCCATATAGTCCCAGTGCTCTTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091282.5 |
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| CDS TCA 72 bp | ACTGCCTTTGCCATGCCCGGAGTGATGCTTATAAGTTaGGAAAAGAGCACTGGGACTATATGGCCCCCACAG | + |
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Preference number: 6 (lower is better) Translates to: TAFAMPGVMLIS*EKSTGTIWPPQ Trigger: CTGTGGGGGCCATATAGTCCCAGTGCTCTTTTCTCAACTTATAAGCATCACTCCGGGCATGGCAAAGGCAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091282.5 |
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| CDS CAA 72 bp | CACTGCCTTTGCCATGCCCGGAGTGATGCTTATAAGTaGAGAAAAGAGCACTGGGACTATATGGCCCCCACA | + |
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Preference number: 6 (lower is better) Translates to: HCLCHARSDAYK*RKEHWDYMAPT Trigger: TGTGGGGGCCATATAGTCCCAGTGCTCTTTTCTCAACTTATAAGCATCACTCCGGGCATGGCAAAGGCAGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091282.5 |
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| CDS CCA 72 bp | CAGAATGATTGTCAGGAAGGTTGGCATCCTTGCCCTTaGTTTTACCACGTAAGGGCTGTGAACGGCAAGACT | + |
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Preference number: 6 (lower is better) Translates to: QNDCQEGWHPCP*FYHVRAVNGKT Trigger: AGTCTTGCCGTTCACAGCCCTTACGTGGTAAAACCAAGGGCAAGGATGCCAACCTTCCTGACAATCATTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091282.5 |
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| CDS CCA 72 bp | TGTCACTTGGTGTGCATGAATCATTCCCACTACGTATaGCTTTTTAGGACATCCAGGCCTAGCTGGAAGAGT | + |
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Preference number: 6 (lower is better) Translates to: CHLVCMNHSHYV*LFRTSRPSWKS Trigger: ACTCTTCCAGCTAGGCCTGGATGTCCTAAAAAGCCATACGTAGTGGGAATGATTCATGCACACCAAGTGACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091282.5 |
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| CDS CCA 72 bp | TTTCAACTTCTTGTAACACAGGGACCCTTCCTGGGATaGTTCCAGGTGAAGTCACTTTTGCAGTTCCTCCAA | + |
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Preference number: 6 (lower is better) Translates to: FQLLVTQGPFLG*FQVKSLLQFLQ Trigger: TTGGAGGAACTGCAAAAGTGACTTCACCTGGAACCATCCCAGGAAGGGTCCCTGTGTTACAAGAAGTTGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091282.5 |
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| CDS CAA 72 bp | AGTGCGAACCCTATCCTGTACTTTCTCACTTTCCCATaGTGTTTGCCTTTTCCTTTACCCCCACTGCCTTTG | + |
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Preference number: 6 (lower is better) Translates to: SANPILYFLTFP*CLPFPLPPLPL Trigger: CAAAGGCAGTGGGGGTAAAGGAAAAGGCAAACACAATGGGAAAGTGAGAAAGTACAGGATAGGGTTCGCACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091282.5 |
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| CDS TCA 72 bp | TTGTCTCCAGCTCCCATGTTAGCCTCTGTTTCTCCATaGTTGTTTTCAGAAGTGCTGCCAACATCAGAAGGT | + |
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Preference number: 6 (lower is better) Translates to: LSPAPMLASVSP*LFSEVLPTSEG Trigger: ACCTTCTGATGTTGGCAGCACTTCTGAAAACAATCATGGAGAAACAGAGGCTAACATGGGAGCTGGAGACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091282.5 |
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| CDS GCA 72 bp | GTCTTTGGGCAAGTCCCATCCAATTGTCACTTGGTGTaGATGAATCATTCCCACTACGTATGGCTTTTTAGG | + |
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Preference number: 6 (lower is better) Translates to: VFGQVPSNCHLV*MNHSHYVWLFR Trigger: CCTAAAAAGCCATACGTAGTGGGAATGATTCATGCACACCAAGTGACAATTGGATGGGACTTGCCCAAAGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091282.5 |
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| CDS CCA 72 bp | GGCTGTAACTTGAAATGTTCATTCCACCGTTGTCTTTaGGCAAGTCCCATCCAATTGTCACTTGGTGTGCAT | + |
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Preference number: 6 (lower is better) Translates to: GCNLKCSFHRCL*ASPIQLSLGVH Trigger: ATGCACACCAAGTGACAATTGGATGGGACTTGCCCAAAGACAACGGTGGAATGAACATTTCAAGTTACAGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091282.5 |
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| CDS CAA 72 bp | TTAAGCTGTGGAGGCTCTGGTGGTAGTGGTTTGGTTTaGCATCTTATTGATGGGCTAAAAGGGCTTAGTCCA | + |
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Preference number: 6 (lower is better) Translates to: LSCGGSGGSGLV*HLIDGLKGLSP Trigger: TGGACTAAGCCCTTTTAGCCCATCAATAAGATGCAAAACCAAACCACTACCACCAGAGCCTCCACAGCTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091282.5 |
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| CDS TCA 72 bp | GCTGCCAACATCAGAAGGTCTGAGGCCATCATTAGTTaGGATGAAAGTGTTGCAAGCATTCTCAGAAGTACA | + |
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Preference number: 6 (lower is better) Translates to: AANIRRSEAIIS*DESVASILRST Trigger: TGTACTTCTGAGAATGCTTGCAACACTTTCATCTCAACTAATGATGGCCTCAGACCTTCTGATGTTGGCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091282.5 |
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| CDS TCA 72 bp | TTGGGCAAGTCCCATCCAATTGTCACTTGGTGTGCATaGATCATTCCCACTACGTATGGCTTTTTAGGACAT | + |
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Preference number: 6 (lower is better) Translates to: LGKSHPIVTWCA*IIPTTYGFLGH Trigger: ATGTCCTAAAAAGCCATACGTAGTGGGAATGATTCATGCACACCAAGTGACAATTGGATGGGACTTGCCCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091282.5 |
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| CDS GCA 72 bp | CAGGCAAAAATCCGAAACTTGTATGTAGTATTTCTCTaGAGATTTCGTACGGTGCAGGTGAGGTCTTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: QAKIRNLYVVFL*RFRTVQVRSSP Trigger: TGGAGAAGACCTCACCTGCACCGTACGAAATCTGCAGAGAAATACTACATACAAGTTTCGGATTTTTGCCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091282.5 |
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| CDS GCA 72 bp | CTCACAACAGTTGTTATTCAGTGGATGAACTTTAGGTaGTTTCAGTGCAGTGGGTGGGGACTTTGTAGTAGT | + |
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Preference number: 6 (lower is better) Translates to: LTTVVIQWMNFR*FQCSGWGLCSS Trigger: ACTACTACAAAGTCCCCACCCACTGCACTGAAAGCACCTAAAGTTCATCCACTGAATAACAACTGTTGTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091282.5 |
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| CDS CCA 72 bp | AGACTCCCATTTGATCTCACAACAGTTGTTATTCAGTaGATGAACTTTAGGTGCTTTCAGTGCAGTGGGTGG | + |
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Preference number: 6 (lower is better) Translates to: RLPFDLTTVVIQ*MNFRCFQCSGW Trigger: CCACCCACTGCACTGAAAGCACCTAAAGTTCATCCACTGAATAACAACTGTTGTGAGATCAAATGGGAGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091282.5 |
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| CDS CAA 72 bp | ACACAATTAAGCTGTGGAGGCTCTGGTGGTAGTGGTTaGGTTTTGCATCTTATTGATGGGCTAAAAGGGCTT | + |
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Preference number: 6 (lower is better) Translates to: TQLSCGGSGGSG*VLHLIDGLKGL Trigger: AAGCCCTTTTAGCCCATCAATAAGATGCAAAACCAAACCACTACCACCAGAGCCTCCACAGCTTAATTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091282.5 |
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| CDS GCA 72 bp | GTTGTTATTCAGTGGATGAACTTTAGGTGCTTTCAGTaGAGTGGGTGGGGACTTTGTAGTAGTGAAAGTGTA | + |
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Preference number: 6 (lower is better) Translates to: VVIQWMNFRCFQ*SGWGLCSSESV Trigger: TACACTTTCACTACTACAAAGTCCCCACCCACTGCACTGAAAGCACCTAAAGTTCATCCACTGAATAACAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091282.5 |
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| CDS CAA 72 bp | CTCCTTCCATCCAGATTGCAGGCAAAAATCCGAAACTaGTATGTAGTATTTCTCTGCAGATTTCGTACGGTG | + |
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Preference number: 6 (lower is better) Translates to: LLPSRLQAKIRN*YVVFLCRFRTV Trigger: CACCGTACGAAATCTGCAGAGAAATACTACATACAAGTTTCGGATTTTTGCCTGCAATCTGGATGGAAGGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091282.5 |
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| CDS CAA 90 bp | AGAGATTTGCCCCATCTGAATTTTCACAAACTTCTAGGCTGTAACTaGAAATGTTCATTCCACCGTTGTCTTTGGGCAAGTCCCATCCAA | + |
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Preference number: 6 (lower is better) Translates to: RDLPHLNFHKLLGCN*KCSFHRCLWASPIQ Trigger: TTGGATGGGACTTGCCCAAAGACAACGGTGGAATGAACATTTCAAGTTACAGCCTAGAAGTTTGTGAAAATTCAGATGGGGCAAATCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091282.5 |
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| CDS TCA 72 bp | TGGGATCACCTTCAATTGGCTCCAAAGACTCCCATTTaGTCTCACAACAGTTGTTATTCAGTGGATGAACTT | + |
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Preference number: 6 (lower is better) Translates to: WDHLQLAPKTPI*SHNSCYSVDEL Trigger: AAGTTCATCCACTGAATAACAACTGTTGTGAGATCAAATGGGAGTCTTTGGAGCCAATTGAAGGTGATCCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091282.5 |
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| CDS CCA 72 bp | TCAGACTCTGGTCCTTCCCCAGCTTCATTACATGCCTaGATTTTAAACTTGTATTCTGTATACTCACTCAAC | + |
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Preference number: 6 (lower is better) Translates to: SDSGPSPASLHA*ILNLYSVYSLN Trigger: GTTGAGTGAGTATACAGAATACAAGTTTAAAATCCAGGCATGTAATGAAGCTGGGGAAGGACCAGAGTCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091282.5 |
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| CDS CCA 72 bp | ATTAGAAACCACAGGTTTTCCAATGGCAAAACAACATaGCTGTGTTCCGTTCTCTGTATTGTGTTCTTTCAG | + |
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Preference number: 6 (lower is better) Translates to: IRNHRFSNGKTT*LCSVLCIVFFQ Trigger: CTGAAAGAACACAATACAGAGAACGGAACACAGCCATGTTGTTTTGCCATTGGAAAACCTGTGGTTTCTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091282.5 |
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| CDS CAA 90 bp | ATGGCTGTGTTCCGTTCTCTGTATTGTGTTCTTTCAGTGATGCATTaGACGACTGACTCTTCTTTTGGTTTTCACCTAATATCTGCTTAT | + |
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Preference number: 6 (lower is better) Translates to: MAVFRSLYCVLSVMH*TTDSSFGFHLISAY Trigger: ATAAGCAGATATTAGGTGAAAACCAAAAGAAGAGTCAGTCGTCAAATGCATCACTGAAAGAACACAATACAGAGAACGGAACACAGCCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091282.5 |
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| CDS CAA 90 bp | GTAGTATATTTTACTTCTCCACTGGGTTTACTCCTTCCATCCAGATaGCAGGCAAAAATCCGAAACTTGTATGTAGTATTTCTCTGCAGA | + |
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Preference number: 6 (lower is better) Translates to: VVYFTSPLGLLLPSR*QAKIRNLYVVFLCR Trigger: TCTGCAGAGAAATACTACATACAAGTTTCGGATTTTTGCCTGCAATCTGGATGGAAGGAGTAAACCCAGTGGAGAAGTAAAATATACTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091282.5 |
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| CDS GCA 72 bp | ATACTGAATAGCAACAGCACACAAAATAGCAATAAGTaGGAACCCTATCCTGTACTTTCTCACTTTCCCATT | + |
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Preference number: 6 (lower is better) Translates to: ILNSNSTQNSNK*EPYPVLSHFPI Trigger: AATGGGAAAGTGAGAAAGTACAGGATAGGGTTCGCACTTATTGCTATTTTGTGTGCTGTTGCTATTCAGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091282.5 |
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| CDS CAA 72 bp | GATTTTAAACTTGTATTCTGTATACTCACTCAACTTTaGCACTTTGTGAGTCACATCCGGCCCACGGTAAAT | + |
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Preference number: 6 (lower is better) Translates to: DFKLVFCILTQL*HFVSHIRPTVN Trigger: ATTTACCGTGGGCCGGATGTGACTCACAAAGTGCAAAAGTTGAGTGAGTATACAGAATACAAGTTTAAAATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091282.5 |
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| CDS TCA 72 bp | AATACTGTTATTGATGTCAGTGTAAAAGCCTGCATTTaGGGTAGAAATGATTGTGGCATGAGCAGAAGAACT | + |
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Preference number: 6 (lower is better) Translates to: NTVIDVSVKACI*GRNDCGMSRRT Trigger: AGTTCTTCTGCTCATGCCACAATCATTTCTACCTCAAATGCAGGCTTTTACACTGACATCAATAACAGTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091282.5 |
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| CDS TCA 72 bp | GATGAAAGTGTTGCAAGCATTCTCAGAAGTACAACTTaGAATACTCTTAGTATTTGGTGGTTCCTGAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: DESVASILRSTT*NTLSIWWFLSF Trigger: GAAACTCAGGAACCACCAAATACTAAGAGTATTTCAAGTTGTACTTCTGAGAATGCTTGCAACACTTTCATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091282.5 |
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| CDS CAA 72 bp | AGTATTTGGTGGTTCCTGAGTTTCATCAGATGTGACTaGATTACAAGTACTTATGGAAGGGCCTATAATACT | + |
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Preference number: 6 (lower is better) Translates to: SIWWFLSFIRCD*ITSTYGRAYNT Trigger: AGTATTATAGGCCCTTCCATAAGTACTTGTAATCAAGTCACATCTGATGAAACTCAGGAACCACCAAATACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091282.5 |
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| CDS TCA 72 bp | TCTGTATTGTGTTCTTTCAGTGATGCATTTGACGACTaGCTCTTCTTTTGGTTTTCACCTAATATCTGCTTA | + |
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Preference number: 6 (lower is better) Translates to: SVLCSFSDAFDD*LFFWFSPNICL Trigger: TAAGCAGATATTAGGTGAAAACCAAAAGAAGAGTCAGTCGTCAAATGCATCACTGAAAGAACACAATACAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091282.5 |
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