Pregenerated sensors for FNBP1L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039735Ensembl transcript IDs: ENSMUST00000162409.8, ENSMUST00000162947.3, ENSMUST00000197259.5, ENSMUST00000239148.2
Found 314 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TACAGAGACATGCCTGAAAACTCTAAGCCCAGATCACGCGAGACATaGAACAGGGTGTTAAGCAAGCGCAGGGGTGGTGCAGGCGGACAG | + |
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Preference number: 1 (lower is better) Translates to: YRDMPENSKPRSRET*NRVLSKRRGGAGGQ Trigger: CTGTCCGCCTGCACCACCCCTGCGCTTGCTTAACACCCTGTTGCATGTCTCGCGTGATCTGGGCTTAGAGTTTTCAGGCATGTCTCTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
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| 3UTR TCA 90 bp | TGCAACAGGGTGTTAAGCAAGCGCAGGGGTGGTGCAGGCGGACAGTaGCAAATGGTGACAGACGACGAGTCTAGAAGCCAATTCAACAGA | + |
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Preference number: 1 (lower is better) Translates to: CNRVLSKRRGGAGGQ*QMVTDDESRSQFNR Trigger: TCTGTTGAATTGGCTTCTAGACTCGTCGTCTGTCACCATTTGTCACTGTCCGCCTGCACCACCCCTGCGCTTGCTTAACACCCTGTTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
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| 3UTR TCA 90 bp | GTGTTATTATGCCAGGCCTTCAGTGCTGACCAGATTCTCCCAGACTaGGGTGCTGAAGATGCGTCACATTTCAGAGTCGGTAACTGGGCT | + |
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Preference number: 1 (lower is better) Translates to: VLLCQAFSADQILPD*GAEDASHFRVGNWA Trigger: AGCCCAGTTACCGACTCTGAAATGTGACGCATCTTCAGCACCTCAGTCTGGGAGAATCTGGTCAGCACTGAAGGCCTGGCATAATAACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
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| 3UTR CCA 90 bp | CTTCCACACCAGCATCACTTGAACAGTAAGGCGTCAAAGAGTTTCTaGTGGCAGTATTCACACTCTGATCCAGCCTGCACTCAGCTCACA | + |
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Preference number: 1 (lower is better) Translates to: LPHQHHLNSKASKSF*WQYSHSDPACTQLT Trigger: TGTGAGCTGAGTGCAGGCTGGATCAGAGTGTGAATACTGCCACCAGAAACTCTTTGACGCCTTACTGTTCAAGTGATGCTGGTGTGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
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| 3UTR GCA 90 bp | CACCAGAGAACTCTGAAACACAAGATGATCAAAGGCCAGTGTTACTaGCTCCTCCCTTTATCTCCTCACTCAACTAACAAGGATGTGGTC | + |
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Preference number: 1 (lower is better) Translates to: HQRTLKHKMIKGQCY*LLPLSPHSTNKDVV Trigger: GACCACATCCTTGTTAGTTGAGTGAGGAGATAAAGGGAGGAGGCAGTAACACTGGCCTTTGATCATCTTGTGTTTCAGAGTTCTCTGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
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| 3UTR TCA 90 bp | AGATTTAGGCACTCGATTTTAAGGCAGCATTTGAATGGAAGCAGCTaGCTTTTGACAATAGTCCCTTCGGTGTTATTATGCCAGGCCTTC | + |
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Preference number: 1 (lower is better) Translates to: RFRHSILRQHLNGSS*LLTIVPSVLLCQAF Trigger: GAAGGCCTGGCATAATAACACCGAAGGGACTATTGTCAAAAGTCAGCTGCTTCCATTCAAATGCTGCCTTAAAATCGAGTGCCTAAATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
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| 3UTR TCA 90 bp | TTTCAGGTCTCAATGCTGTTTTATTCGCATACAAGCTCTACCAGGTaGCTTATCCTGCGATCCCTAGATGAGCTCATATTAAATAGATTA | + |
|
Preference number: 1 (lower is better) Translates to: FQVSMLFYSHTSSTR*LILRSLDELILNRL Trigger: TAATCTATTTAATATGAGCTCATCTAGGGATCGCAGGATAAGTCACCTGGTAGAGCTTGTATGCGAATAAAACAGCATTGAGACCTGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
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| 3UTR CCA 90 bp | ATCGTAAATACTTCAGGTTCACAGACTATGTCTTCATGTCAAAACTaGAACGTTTGCAGTAGGGAAGTTTTAGCAGCATACACAGATACT | + |
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Preference number: 1 (lower is better) Translates to: IVNTSGSQTMSSCQN*NVCSREVLAAYTDT Trigger: AGTATCTGTGTATGCTGCTAAAACTTCCCTACTGCAAACGTTCCAGTTTTGACATGAAGACATAGTCTGTGAACCTGAAGTATTTACGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
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| 3UTR-3UTR TCA 90 bp | TCTCCTCTAAGAACACGCCTGCCACACTTTCTTCCTCCACTCCAGACTGTCCCTAGTCACTGTTGCTTCTaGGGTGCAGGGGGCAGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: SPLRTRLPHFLPPLQTVPSHCCF*GAGGRK Trigger: TTTCCTGCCCCCTGCACCTCAGAAGCAACAGTGACT...AGGGACAGTCTGGAGTGGAGGAAGAAAGTGTGGCAGGCGTGTTCTTAGAGGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
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| 3UTR-3UTR TCA 90 bp | GAGAACTCTGAAACACAAGATGATCAAAGGCCAGTGTTACTGCCTCCTCCCTTTTCTCGCCCTAGAACCTaGGCTGTCAGTCCCAGCTCC | + |
|
Preference number: 2 (lower is better) Translates to: ENSETQDDQRPVLLPPPFSRPRT*AVSPSS Trigger: GGAGCTGGGACTGACAGCTCAGGTTCTAGGGCGAGA...AAAGGGAGGAGGCAGTAACACTGGCCTTTGATCATCTTGTGTTTCAGAGTTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
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| 3UTR-3UTR TCA 90 bp | GAGAACTCTGAAACACAAGATGATCAAAGGCCAGTGTTACTGCCTCCTCCCTTTAGTCACTGTTGCTTCTaGGGTGCAGGGGGCAGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: ENSETQDDQRPVLLPPPFSHCCF*GAGGRK Trigger: TTTCCTGCCCCCTGCACCTCAGAAGCAACAGTGACT...AAAGGGAGGAGGCAGTAACACTGGCCTTTGATCATCTTGTGTTTCAGAGTTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
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| 3UTR-3UTR TCA 90 bp | TTGACAATAGTCCCTTCGGTGTTATTATGCCAGGCCTTCAGTGCTGACCAGATTGTCAGTCCCAGCTCCTaGGAGTCGGCTTTCTACAGT | + |
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Preference number: 2 (lower is better) Translates to: LTIVPSVLLCQAFSADQIVSPSS*ESAFYS Trigger: ACTGTAGAAAGCCGACTCTCAGGAGCTGGGACTGAC...AATCTGGTCAGCACTGAAGGCCTGGCATAATAACACCGAAGGGACTATTGTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
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| 3UTR-3UTR TCA 90 bp | TTTGAATGGAAGCAGCTGACTTTTGACAATAGTCCCTTCGGTGTTATTATGCCATCTCGCCCTAGAACCTaGGCTGTCAGTCCCAGCTCC | + |
|
Preference number: 2 (lower is better) Translates to: FEWKQLTFDNSPFGVIMPSRPRT*AVSPSS Trigger: GGAGCTGGGACTGACAGCTCAGGTTCTAGGGCGAGA...TGGCATAATAACACCGAAGGGACTATTGTCAAAAGTCAGCTGCTTCCATTCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
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| 3UTR-3UTR TCA 90 bp | TGGAACGTTTGCAGTAGGGAAGTTTTAGCAGCATACACAGATACTAAGATGGAATCTCGCCCTAGAACCTaGGCTGTCAGTCCCAGCTCC | + |
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Preference number: 2 (lower is better) Translates to: WNVCSREVLAAYTDTKMESRPRT*AVSPSS Trigger: GGAGCTGGGACTGACAGCTCAGGTTCTAGGGCGAGA...TTCCATCTTAGTATCTGTGTATGCTGCTAAAACTTCCCTACTGCAAACGTTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGCATTTGAATGGAAGCAGCTGACTTTTGACAATAGTCCCTTCGGTGTTATTGTCAGTCCCAGCTCCTaGGAGTCGGCTTTCTACAGT | + |
|
Preference number: 2 (lower is better) Translates to: AAFEWKQLTFDNSPFGVIVSPSS*ESAFYS Trigger: ACTGTAGAAAGCCGACTCTCAGGAGCTGGGACTGAC...AATAACACCGAAGGGACTATTGTCAAAAGTCAGCTGCTTCCATTCAAATGCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCCTCTAAGAACACGCCTGCCACACTTTCTTCCTCCACTCCAGACTGTCCCTTCAAAGAGTTTCTGGTaGCAGTATTCACACTCTGAT | + |
|
Preference number: 2 (lower is better) Translates to: SPLRTRLPHFLPPLQTVPSKSFW*QYSHSD Trigger: ATCAGAGTGTGAATACTGCCACCAGAAACTCTTTGA...AGGGACAGTCTGGAGTGGAGGAAGAAAGTGTGGCAGGCGTGTTCTTAGAGGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
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| 3UTR-3UTR TCA 90 bp | TTTGAATGGAAGCAGCTGACTTTTGACAATAGTCCCTTCGGTGTTATTATGCCAGTCAGTCCCAGCTCCTaGGAGTCGGCTTTCTACAGT | + |
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Preference number: 2 (lower is better) Translates to: FEWKQLTFDNSPFGVIMPVSPSS*ESAFYS Trigger: ACTGTAGAAAGCCGACTCTCAGGAGCTGGGACTGAC...TGGCATAATAACACCGAAGGGACTATTGTCAAAAGTCAGCTGCTTCCATTCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
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| 3UTR-3UTR TCA 90 bp | GATGACGACAGTCCTAACGGACAGCCCAAAATAAGACAAACTTTAAGACAGCTCACAAGCTCTACCAGGTaGCTTATCCTGCGATCCCTA | + |
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Preference number: 2 (lower is better) Translates to: DDDSPNGQPKIRQTLRQLTSSTR*LILRSL Trigger: TAGGGATCGCAGGATAAGTCACCTGGTAGAGCTTGT...GAGCTGTCTTAAAGTTTGTCTTATTTTGGGCTGTCCGTTAGGACTGTCGTCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
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| 3UTR-3UTR TCA 90 bp | TGGAAGCAGCTGACTTTTGACAATAGTCCCTTCGGTGTTATTATGCCAGGCCTTACTCAACCTCTCCTATaGGTAACTGCCAGGAACCAA | + |
|
Preference number: 2 (lower is better) Translates to: WKQLTFDNSPFGVIMPGLTQPLL*VTARNQ Trigger: TTGGTTCCTGGCAGTTACTCATAGGAGAGGTTGAGT...AAGGCCTGGCATAATAACACCGAAGGGACTATTGTCAAAAGTCAGCTGCTTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGCATTTGAATGGAAGCAGCTGACTTTTGACAATAGTCCCTTCGGTGTTATTGTCCCTTACCTCCACTaGGTTAGACTCAACCTCTCC | + |
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Preference number: 2 (lower is better) Translates to: AAFEWKQLTFDNSPFGVIVPYLH*VRLNLS Trigger: GGAGAGGTTGAGTCTAACTCAGTGGAGGTAAGGGAC...AATAACACCGAAGGGACTATTGTCAAAAGTCAGCTGCTTCCATTCAAATGCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
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| 3UTR-3UTR TCA 90 bp | GATGACGACAGTCCTAACGGACAGCCCAAAATAAGACAAACTTTAAGACAGCTCCACACCAGCATCACTTaGACAGTAAGGCGTCAAAGA | + |
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Preference number: 2 (lower is better) Translates to: DDDSPNGQPKIRQTLRQLHTSIT*TVRRQR Trigger: TCTTTGACGCCTTACTGTTCAAGTGATGCTGGTGTG...GAGCTGTCTTAAAGTTTGTCTTATTTTGGGCTGTCCGTTAGGACTGTCGTCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
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| 3UTR-3UTR TCA 90 bp | GATGACGACAGTCCTAACGGACAGCCCAAAATAAGACAAACTTTAAGACAGCTCACTCAACCTCTCCTATaGGTAACTGCCAGGAACCAA | + |
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Preference number: 2 (lower is better) Translates to: DDDSPNGQPKIRQTLRQLTQPLL*VTARNQ Trigger: TTGGTTCCTGGCAGTTACTCATAGGAGAGGTTGAGT...GAGCTGTCTTAAAGTTTGTCTTATTTTGGGCTGTCCGTTAGGACTGTCGTCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
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| 3UTR-3UTR CCA 90 bp | GATGACGACAGTCCTAACGGACAGCCCAAAATAAGACAAACTTTAAGACAGCTCCACTGTACAGCTGACTaGACACATTCCAACAGATGC | + |
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Preference number: 2 (lower is better) Translates to: DDDSPNGQPKIRQTLRQLHCTAD*THSNRC Trigger: GCATCTGTTGGAATGTGTCCAGTCAGCTGTACAGTG...GAGCTGTCTTAAAGTTTGTCTTATTTTGGGCTGTCCGTTAGGACTGTCGTCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
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| 3UTR-3UTR TCA 90 bp | AGTTGGCTACTAAACACACCAGAGAACTCTGAAACACAAGATGATCAAAGGCCACACACCAGCATCACTTaGACAGTAAGGCGTCAAAGA | + |
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Preference number: 2 (lower is better) Translates to: SWLLNTPENSETQDDQRPHTSIT*TVRRQR Trigger: TCTTTGACGCCTTACTGTTCAAGTGATGCTGGTGTG...TGGCCTTTGATCATCTTGTGTTTCAGAGTTCTCTGGTGTGTTTAGTAGCCAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGCATTTGAATGGAAGCAGCTGACTTTTGACAATAGTCCCTTCGGTGTTATTCACACCAGCATCACTTaGACAGTAAGGCGTCAAAGA | + |
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Preference number: 2 (lower is better) Translates to: AAFEWKQLTFDNSPFGVIHTSIT*TVRRQR Trigger: TCTTTGACGCCTTACTGTTCAAGTGATGCTGGTGTG...AATAACACCGAAGGGACTATTGTCAAAAGTCAGCTGCTTCCATTCAAATGCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
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| 3UTR-3UTR TCA 90 bp | AGTTGGCTACTAAACACACCAGAGAACTCTGAAACACAAGATGATCAAAGGCCAACTACACTGTACAGCTaGCTGGACACATTCCAACAG | + |
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Preference number: 2 (lower is better) Translates to: SWLLNTPENSETQDDQRPTTLYS*LDTFQQ Trigger: CTGTTGGAATGTGTCCAGTCAGCTGTACAGTGTAGT...TGGCCTTTGATCATCTTGTGTTTCAGAGTTCTCTGGTGTGTTTAGTAGCCAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
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| 3UTR-3UTR TCA 90 bp | ATACTTCAGGTTCACAGACTATGTCTTCATGTCAAAACTGGAACGTTTGCAGTAACAAGCTCTACCAGGTaGCTTATCCTGCGATCCCTA | + |
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Preference number: 2 (lower is better) Translates to: ILQVHRLCLHVKTGTFAVTSSTR*LILRSL Trigger: TAGGGATCGCAGGATAAGTCACCTGGTAGAGCTTGT...TACTGCAAACGTTCCAGTTTTGACATGAAGACATAGTCTGTGAACCTGAAGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
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| 3UTR-3UTR TCA 90 bp | TTTGAATGGAAGCAGCTGACTTTTGACAATAGTCCCTTCGGTGTTATTATGCCAACTCAACCTCTCCTATaGGTAACTGCCAGGAACCAA | + |
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Preference number: 2 (lower is better) Translates to: FEWKQLTFDNSPFGVIMPTQPLL*VTARNQ Trigger: TTGGTTCCTGGCAGTTACTCATAGGAGAGGTTGAGT...TGGCATAATAACACCGAAGGGACTATTGTCAAAAGTCAGCTGCTTCCATTCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
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| 3UTR-3UTR TCA 90 bp | TTGGTAAGACCAAAAGGGGCATTCAGTTTAAAGTGTCTGTCCCAAATGTACCTAACTACACTGTACAGCTaGCTGGACACATTCCAACAG | + |
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Preference number: 2 (lower is better) Translates to: LVRPKGAFSLKCLSQMYLTTLYS*LDTFQQ Trigger: CTGTTGGAATGTGTCCAGTCAGCTGTACAGTGTAGT...TAGGTACATTTGGGACAGACACTTTAAACTGAATGCCCCTTTTGGTCTTACCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
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| 3UTR-3UTR TCA 90 bp | AGTTGGCTACTAAACACACCAGAGAACTCTGAAACACAAGATGATCAAAGGCCAAAGGATGTGGTCACATaGCAACTACACTGTACAGCT | + |
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Preference number: 2 (lower is better) Translates to: SWLLNTPENSETQDDQRPKDVVT*QLHCTA Trigger: AGCTGTACAGTGTAGTTGTCATGTGACCACATCCTT...TGGCCTTTGATCATCTTGTGTTTCAGAGTTCTCTGGTGTGTTTAGTAGCCAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
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| 3UTR-3UTR GCA 90 bp | GAGAACTCTGAAACACAAGATGATCAAAGGCCAGTGTTACTGCCTCCTCCCTTTACACATTCCAACAGATaGTTTTGGCAATACATTAGA | + |
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Preference number: 2 (lower is better) Translates to: ENSETQDDQRPVLLPPPFTHSNR*FWQYIR Trigger: TCTAATGTATTGCCAAAAGCATCTGTTGGAATGTGT...AAAGGGAGGAGGCAGTAACACTGGCCTTTGATCATCTTGTGTTTCAGAGTTCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
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| 3UTR-3UTR CCA 90 bp | TTGGTAAGACCAAAAGGGGCATTCAGTTTAAAGTGTCTGTCCCAAATGTACCTACAACTAACAAGGATGTaGTCACATGACAACTACACT | + |
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Preference number: 2 (lower is better) Translates to: LVRPKGAFSLKCLSQMYLQLTRM*SHDNYT Trigger: AGTGTAGTTGTCATGTGACCACATCCTTGTTAGTTG...TAGGTACATTTGGGACAGACACTTTAAACTGAATGCCCCTTTTGGTCTTACCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
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| 3UTR-3UTR GCA 90 bp | AGTTGGCTACTAAACACACCAGAGAACTCTGAAACACAAGATGATCAAAGGCCAACACATTCCAACAGATaGTTTTGGCAATACATTAGA | + |
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Preference number: 2 (lower is better) Translates to: SWLLNTPENSETQDDQRPTHSNR*FWQYIR Trigger: TCTAATGTATTGCCAAAAGCATCTGTTGGAATGTGT...TGGCCTTTGATCATCTTGTGTTTCAGAGTTCTCTGGTGTGTTTAGTAGCCAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
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| 3UTR-3UTR CCA 90 bp | ATACTTCAGGTTCACAGACTATGTCTTCATGTCAAAACTGGAACGTTTGCAGTATCAAAGAGTTTCTGGTaGCAGTATTCACACTCTGAT | + |
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Preference number: 2 (lower is better) Translates to: ILQVHRLCLHVKTGTFAVSKSFW*QYSHSD Trigger: ATCAGAGTGTGAATACTGCCACCAGAAACTCTTTGA...TACTGCAAACGTTCCAGTTTTGACATGAAGACATAGTCTGTGAACCTGAAGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
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| 3UTR GCA 72 bp | GACATGCAACAGGGTGTTAAGCAAGCGCAGGGGTGGTaGAGGCGGACAGTGACAAATGGTGACAGACGACGA | + |
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Preference number: 3 (lower is better) Translates to: DMQQGVKQAQGW*RRTVTNGDRRR Trigger: TCGTCGTCTGTCACCATTTGTCACTGTCCGCCTGCACCACCCCTGCGCTTGCTTAACACCCTGTTGCATGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
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| 3UTR CCA 72 bp | CGAGACATGCAACAGGGTGTTAAGCAAGCGCAGGGGTaGTGCAGGCGGACAGTGACAAATGGTGACAGACGA | + |
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Preference number: 3 (lower is better) Translates to: RDMQQGVKQAQG*CRRTVTNGDRR Trigger: TCGTCTGTCACCATTTGTCACTGTCCGCCTGCACCACCCCTGCGCTTGCTTAACACCCTGTTGCATGTCTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
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| 3UTR TCA 72 bp | TGCCAGGCCTTCAGTGCTGACCAGATTCTCCCAGACTaGGGTGCTGAAGATGCGTCACATTTCAGAGTCGGT | + |
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Preference number: 3 (lower is better) Translates to: CQAFSADQILPD*GAEDASHFRVG Trigger: ACCGACTCTGAAATGTGACGCATCTTCAGCACCTCAGTCTGGGAGAATCTGGTCAGCACTGAAGGCCTGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
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| 3UTR GCA 72 bp | ATGCCTGAAAACTCTAAGCCCAGATCACGCGAGACATaGAACAGGGTGTTAAGCAAGCGCAGGGGTGGTGCA | + |
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Preference number: 3 (lower is better) Translates to: MPENSKPRSRET*NRVLSKRRGGA Trigger: TGCACCACCCCTGCGCTTGCTTAACACCCTGTTGCATGTCTCGCGTGATCTGGGCTTAGAGTTTTCAGGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
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| 3UTR TCA 72 bp | GGCGTCAAAGAGTTTCTGGTGGCAGTATTCACACTCTaGTCCAGCCTGCACTCAGCTCACATAGTGAACAAC | + |
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Preference number: 3 (lower is better) Translates to: GVKEFLVAVFTL*SSLHSAHIVNN Trigger: GTTGTTCACTATGTGAGCTGAGTGCAGGCTGGATCAGAGTGTGAATACTGCCACCAGAAACTCTTTGACGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
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| 3UTR CCA 72 bp | CATCACTTGAACAGTAAGGCGTCAAAGAGTTTCTGGTaGCAGTATTCACACTCTGATCCAGCCTGCACTCAG | + |
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Preference number: 3 (lower is better) Translates to: HHLNSKASKSFW*QYSHSDPACTQ Trigger: CTGAGTGCAGGCTGGATCAGAGTGTGAATACTGCCACCAGAAACTCTTTGACGCCTTACTGTTCAAGTGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
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| 3UTR CCA 72 bp | CAGCATCACTTGAACAGTAAGGCGTCAAAGAGTTTCTaGTGGCAGTATTCACACTCTGATCCAGCCTGCACT | + |
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Preference number: 3 (lower is better) Translates to: QHHLNSKASKSF*WQYSHSDPACT Trigger: AGTGCAGGCTGGATCAGAGTGTGAATACTGCCACCAGAAACTCTTTGACGCCTTACTGTTCAAGTGATGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
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| 3UTR TCA 72 bp | AAAAGGCATCGATTAAGCTTCCACACCAGCATCACTTaGACAGTAAGGCGTCAAAGAGTTTCTGGTGGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: KRHRLSFHTSIT*TVRRQRVSGGS Trigger: ACTGCCACCAGAAACTCTTTGACGCCTTACTGTTCAAGTGATGCTGGTGTGGAAGCTTAATCGATGCCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| 3UTR CCA 72 bp | TCCTCCCTTTATCTCCTCACTCAACTAACAAGGATGTaGTCACATGACAACTACACTGTACAGCTGACTGGA | + |
|
Preference number: 3 (lower is better) Translates to: SSLYLLTQLTRM*SHDNYTVQLTG Trigger: TCCAGTCAGCTGTACAGTGTAGTTGTCATGTGACCACATCCTTGTTAGTTGAGTGAGGAGATAAAGGGAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| 3UTR TCA 72 bp | CAAGGATGTGGTCACATGACAACTACACTGTACAGCTaGCTGGACACATTCCAACAGATGCTTTTGGCAATA | + |
|
Preference number: 3 (lower is better) Translates to: QGCGHMTTTLYS*LDTFQQMLLAI Trigger: TATTGCCAAAAGCATCTGTTGGAATGTGTCCAGTCAGCTGTACAGTGTAGTTGTCATGTGACCACATCCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| 3UTR GCA 72 bp | ACTCTGAAACACAAGATGATCAAAGGCCAGTGTTACTaGCTCCTCCCTTTATCTCCTCACTCAACTAACAAG | + |
|
Preference number: 3 (lower is better) Translates to: TLKHKMIKGQCY*LLPLSPHSTNK Trigger: CTTGTTAGTTGAGTGAGGAGATAAAGGGAGGAGGCAGTAACACTGGCCTTTGATCATCTTGTGTTTCAGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| 3UTR GCA 72 bp | CTACACTGTACAGCTGACTGGACACATTCCAACAGATaGTTTTGGCAATACATTAGAAGAGGTACCTACTCT | + |
|
Preference number: 3 (lower is better) Translates to: LHCTADWTHSNR*FWQYIRRGTYS Trigger: AGAGTAGGTACCTCTTCTAATGTATTGCCAAAAGCATCTGTTGGAATGTGTCCAGTCAGCTGTACAGTGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| 3UTR CCA 72 bp | TGTACAGCTGACTGGACACATTCCAACAGATGCTTTTaGCAATACATTAGAAGAGGTACCTACTCTGACAGT | + |
|
Preference number: 3 (lower is better) Translates to: CTADWTHSNRCF*QYIRRGTYSDS Trigger: ACTGTCAGAGTAGGTACCTCTTCTAATGTATTGCCAAAAGCATCTGTTGGAATGTGTCCAGTCAGCTGTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| 3UTR TCA 72 bp | CACTCGATTTTAAGGCAGCATTTGAATGGAAGCAGCTaGCTTTTGACAATAGTCCCTTCGGTGTTATTATGC | + |
|
Preference number: 3 (lower is better) Translates to: HSILRQHLNGSS*LLTIVPSVLLC Trigger: GCATAATAACACCGAAGGGACTATTGTCAAAAGTCAGCTGCTTCCATTCAAATGCTGCCTTAAAATCGAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| 3UTR CCA 72 bp | ACTTCAGGTTCACAGACTATGTCTTCATGTCAAAACTaGAACGTTTGCAGTAGGGAAGTTTTAGCAGCATAC | + |
|
Preference number: 3 (lower is better) Translates to: TSGSQTMSSCQN*NVCSREVLAAY Trigger: GTATGCTGCTAAAACTTCCCTACTGCAAACGTTCCAGTTTTGACATGAAGACATAGTCTGTGAACCTGAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTTGGCTACTAAACACACCAGAGAACTCTGAAACACAAGATGATCAAAGGCCACAGTTCAGAACAGGCTaGCTTATTTTAATTCATCAG | + |
|
Preference number: 3 (lower is better) Translates to: SWLLNTPENSETQDDQRPQFRTG*LILIHQ Trigger: CTGATGAATTAAAATAAGCAAGCCTGTTCTGAACTG...TGGCCTTTGATCATCTTGTGTTTCAGAGTTCTCTGGTGTGTTTAGTAGCCAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGGTAAGACCAAAAGGGGCATTCAGTTTAAAGTGTCTGTCCCAAATGTACCTACAGTTCAGAACAGGCTaGCTTATTTTAATTCATCAG | + |
|
Preference number: 3 (lower is better) Translates to: LVRPKGAFSLKCLSQMYLQFRTG*LILIHQ Trigger: CTGATGAATTAAAATAAGCAAGCCTGTTCTGAACTG...TAGGTACATTTGGGACAGACACTTTAAACTGAATGCCCCTTTTGGTCTTACCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| 3UTR-3UTR CAA 90 bp | ATACTTCAGGTTCACAGACTATGTCTTCATGTCAAAACTGGAACGTTTGCAGTACAGTTCAGAACAGGCTaGCTTATTTTAATTCATCAG | + |
|
Preference number: 3 (lower is better) Translates to: ILQVHRLCLHVKTGTFAVQFRTG*LILIHQ Trigger: CTGATGAATTAAAATAAGCAAGCCTGTTCTGAACTG...TACTGCAAACGTTCCAGTTTTGACATGAAGACATAGTCTGTGAACCTGAAGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR GCA 90 bp | CGCGAGACATGCAACAGGGTGTTAAGCAAGCGCAGGGGTGGTGCAGGCGGACAGGTGCGCCATTTCTTCTaGTACTACCTCTCGCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RETCNRVLSKRRGGAGGQVRHFF*YYLSLS Trigger: GGACAGCGAGAGGTAGTAGCAGAAGAAATGGCGCAC...CTGTCCGCCTGCACCACCCCTGCGCTTGCTTAACACCCTGTTGCATGTCTCGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR GCA 90 bp | CGCGAGACATGCAACAGGGTGTTAAGCAAGCGCAGGGGTGGTGCAGGCGGACAGACTCTCCTGTTTGGCTaGACTGATGGTCCCGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RETCNRVLSKRRGGAGGQTLLFG*TDGPVR Trigger: TCTGACGGGACCATCAGTGCAGCCAAACAGGAGAGT...CTGTCCGCCTGCACCACCCCTGCGCTTGCTTAACACCCTGTTGCATGTCTCGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR GCA 90 bp | CGCGAGACATGCAACAGGGTGTTAAGCAAGCGCAGGGGTGGTGCAGGCGGACAGGGCCTTTTCAACATCTaGCTTGGTGGCATTGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RETCNRVLSKRRGGAGGQGLFNI*LGGIGV Trigger: GACACCAATGCCACCAAGGCAGATGTTGAAAAGGCC...CTGTCCGCCTGCACCACCCCTGCGCTTGCTTAACACCCTGTTGCATGTCTCGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR GCA 90 bp | CAGGGTGTTAAGCAAGCGCAGGGGTGGTGCAGGCGGACAGTGACAAATGGTGACTGGTCTGCTTCCTTCTaGAGCCCTCGGTTAAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: QGVKQAQGWCRRTVTNGDWSASF*SPRLSS Trigger: CGAGCTTAACCGAGGGCTGCAGAAGGAAGCAGACCA...GTCACCATTTGTCACTGTCCGCCTGCACCACCCCTGCGCTTGCTTAACACCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR GCA 90 bp | CAGGGTGTTAAGCAAGCGCAGGGGTGGTGCAGGCGGACAGTGACAAATGGTGACGTGCGCCATTTCTTCTaGTACTACCTCTCGCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QGVKQAQGWCRRTVTNGDVRHFF*YYLSLS Trigger: GGACAGCGAGAGGTAGTAGCAGAAGAAATGGCGCAC...GTCACCATTTGTCACTGTCCGCCTGCACCACCCCTGCGCTTGCTTAACACCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR GCA 90 bp | CAGGGTGTTAAGCAAGCGCAGGGGTGGTGCAGGCGGACAGTGACAAATGGTGACACTCTCCTGTTTGGCTaGACTGATGGTCCCGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QGVKQAQGWCRRTVTNGDTLLFG*TDGPVR Trigger: TCTGACGGGACCATCAGTGCAGCCAAACAGGAGAGT...GTCACCATTTGTCACTGTCCGCCTGCACCACCCCTGCGCTTGCTTAACACCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CCA 90 bp | CGCGAGACATGCAACAGGGTGTTAAGCAAGCGCAGGGGTGGTGCAGGCGGACAGCTGCCTTGGTGGCATTaGTGTCATTATCCAACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RETCNRVLSKRRGGAGGQLPWWH*CHYPTS Trigger: AGAGGTTGGATAATGACACCAATGCCACCAAGGCAG...CTGTCCGCCTGCACCACCCCTGCGCTTGCTTAACACCCTGTTGCATGTCTCGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CCA 90 bp | CAGGGTGTTAAGCAAGCGCAGGGGTGGTGCAGGCGGACAGTGACAAATGGTGACAGGCTGCAGACTTCCTaGATCCCCCATCTGTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: QGVKQAQGWCRRTVTNGDRLQTS*IPHLWI Trigger: AATCCACAGATGGGGGATCCAGGAAGTCTGCAGCCT...GTCACCATTTGTCACTGTCCGCCTGCACCACCCCTGCGCTTGCTTAACACCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR GCA 90 bp | CGCGAGACATGCAACAGGGTGTTAAGCAAGCGCAGGGGTGGTGCAGGCGGACAGCTCATAACTCTGCTGTaGTTTCTCCGCTTCTCTACA | + |
|
Preference number: 4 (lower is better) Translates to: RETCNRVLSKRRGGAGGQLITLL*FLRFST Trigger: TGTAGAGAAGCGGAGAAAGCACAGCAGAGTTATGAG...CTGTCCGCCTGCACCACCCCTGCGCTTGCTTAACACCCTGTTGCATGTCTCGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR CCA 90 bp | CGCGAGACATGCAACAGGGTGTTAAGCAAGCGCAGGGGTGGTGCAGGCGGACAGGGTTCAACTGCTGTTTaGCCTTTTCAACATCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RETCNRVLSKRRGGAGGQGSTAV*PFQHLP Trigger: AGGCAGATGTTGAAAAGGCCAAACAGCAGTTGAACC...CTGTCCGCCTGCACCACCCCTGCGCTTGCTTAACACCCTGTTGCATGTCTCGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CCA 90 bp | CGCGAGACATGCAACAGGGTGTTAAGCAAGCGCAGGGGTGGTGCAGGCGGACAGCATGCCTCATTCTTGTaGATTTCCATTCGTAAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: RETCNRVLSKRRGGAGGQHASFL*ISIRKR Trigger: CCGCTTACGAATGGAAATCCACAAGAATGAGGCATG...CTGTCCGCCTGCACCACCCCTGCGCTTGCTTAACACCCTGTTGCATGTCTCGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR GCA 90 bp | CGCGAGACATGCAACAGGGTGTTAAGCAAGCGCAGGGGTGGTGCAGGCGGACAGAACTTCAGAGAGCCATaGCTCATTCTTGTGGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: RETCNRVLSKRRGGAGGQNFREP*LILVDF Trigger: GAAATCCACAAGAATGAGGCATGGCTCTCTGAAGTT...CTGTCCGCCTGCACCACCCCTGCGCTTGCTTAACACCCTGTTGCATGTCTCGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CCA 90 bp | TCTCCTCTAAGAACACGCCTGCCACACTTTCTTCCTCCACTCCAGACTGTCCCTTGGTGGCCATGTTGTTaGGGTGGCCCACGAACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SPLRTRLPHFLPPLQTVPWWPCC*GGPRTS Trigger: AGAAGTTCGTGGGCCACCCCAACAACATGGCCACCA...AGGGACAGTCTGGAGTGGAGGAAGAAAGTGTGGCAGGCGTGTTCTTAGAGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR CCA 90 bp | CAGGGTGTTAAGCAAGCGCAGGGGTGGTGCAGGCGGACAGTGACAAATGGTGACTCATCAAACTCACTGTaGTGGCCATGTTGTTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: QGVKQAQGWCRRTVTNGDSSNSL*WPCCWG Trigger: ACCCCAACAACATGGCCACCACAGTGAGTTTGATGA...GTCACCATTTGTCACTGTCCGCCTGCACCACCCCTGCGCTTGCTTAACACCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CCA 90 bp | CGCGAGACATGCAACAGGGTGTTAAGCAAGCGCAGGGGTGGTGCAGGCGGACAGCATCTATGTATGTTGTaGGAACGTAGCCTTCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RETCNRVLSKRRGGAGGQHLCML*ERSLLH Trigger: GTGAAGAAGGCTACGTTCCCACAACATACATAGATG...CTGTCCGCCTGCACCACCCCTGCGCTTGCTTAACACCCTGTTGCATGTCTCGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR GCA 90 bp | CGCGAGACATGCAACAGGGTGTTAAGCAAGCGCAGGGGTGGTGCAGGCGGACAGACGAACTTCTTGGTTTaGATCATCAGTGTAACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RETCNRVLSKRRGGAGGQTNFLV*IISVTS Trigger: GGAAGTTACACTGATGATGCAAACCAAGAAGTTCGT...CTGTCCGCCTGCACCACCCCTGCGCTTGCTTAACACCCTGTTGCATGTCTCGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CCA 90 bp | CGCGAGACATGCAACAGGGTGTTAAGCAAGCGCAGGGGTGGTGCAGGCGGACAGTTTCAACATCTGCCTTaGTGGCATTGGTGTCATTAT | + |
|
Preference number: 4 (lower is better) Translates to: RETCNRVLSKRRGGAGGQFQHLP*WHWCHY Trigger: ATAATGACACCAATGCCACCAAGGCAGATGTTGAAA...CTGTCCGCCTGCACCACCCCTGCGCTTGCTTAACACCCTGTTGCATGTCTCGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CCA 90 bp | TCTCCTCTAAGAACACGCCTGCCACACTTTCTTCCTCCACTCCAGACTGTCCCTAGGCTGCAGACTTCCTaGATCCCCCATCTGTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: SPLRTRLPHFLPPLQTVPRLQTS*IPHLWI Trigger: AATCCACAGATGGGGGATCCAGGAAGTCTGCAGCCT...AGGGACAGTCTGGAGTGGAGGAAGAAAGTGTGGCAGGCGTGTTCTTAGAGGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR GCA 90 bp | CAGGGTGTTAAGCAAGCGCAGGGGTGGTGCAGGCGGACAGTGACAAATGGTGACTCACCATATACTCTGTaGGCCATTTCTTCTGCTACT | + |
|
Preference number: 4 (lower is better) Translates to: QGVKQAQGWCRRTVTNGDSPYTL*AISSAT Trigger: AGTAGCAGAAGAAATGGCGCACAGAGTATATGGTGA...GTCACCATTTGTCACTGTCCGCCTGCACCACCCCTGCGCTTGCTTAACACCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR GCA 90 bp | TCTCCTCTAAGAACACGCCTGCCACACTTTCTTCCTCCACTCCAGACTGTCCCTTGCTTCTTTTTGGTCTaGTTCCTTCTGCAGCCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SPLRTRLPHFLPPLQTVPCFFLV*FLLQPS Trigger: CGAGGGCTGCAGAAGGAAGCAGACCAAAAAGAAGCA...AGGGACAGTCTGGAGTGGAGGAAGAAAGTGTGGCAGGCGTGTTCTTAGAGGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR CCA 90 bp | TGGAAGCAGCTGACTTTTGACAATAGTCCCTTCGGTGTTATTATGCCAGGCCTTGCCACAGCTTGCCCTTaGCCTTCCCCACTGTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: WKQLTFDNSPFGVIMPGLATACP*PSPLWT Trigger: AGTCCACAGTGGGGAAGGCCAAGGGCAAGCTGTGGC...AAGGCCTGGCATAATAACACCGAAGGGACTATTGTCAAAAGTCAGCTGCTTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CCA 90 bp | CAGGGTGTTAAGCAAGCGCAGGGGTGGTGCAGGCGGACAGTGACAAATGGTGACTGGATCCCCCATCTGTaGATTTTTCTCATACACATC | + |
|
Preference number: 4 (lower is better) Translates to: QGVKQAQGWCRRTVTNGDWIPHL*IFLIHI Trigger: GATGTGTATGAGAAAAATCCACAGATGGGGGATCCA...GTCACCATTTGTCACTGTCCGCCTGCACCACCCCTGCGCTTGCTTAACACCCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR TCA 90 bp | CAGGGTGTTAAGCAAGCGCAGGGGTGGTGCAGGCGGACAGTGACAAATGGTGACGAGTCTACTACCATTTaGGAATCTCTTCTTTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: QGVKQAQGWCRRTVTNGDESTTI*ESLLSS Trigger: TGATGAAAGAAGAGATTCTCAAATGGTAGTAGACTC...GTCACCATTTGTCACTGTCCGCCTGCACCACCCCTGCGCTTGCTTAACACCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR GCA 90 bp | GAGAACTCTGAAACACAAGATGATCAAAGGCCAGTGTTACTGCCTCCTCCCTTTTGGTCTGCTTCCTTCTaGAGCCCTCGGTTAAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: ENSETQDDQRPVLLPPPFWSASF*SPRLSS Trigger: CGAGCTTAACCGAGGGCTGCAGAAGGAAGCAGACCA...AAAGGGAGGAGGCAGTAACACTGGCCTTTGATCATCTTGTGTTTCAGAGTTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR CCA 90 bp | TATAAGGCAGAAAAAGCACACATCCTTTACACACACTTAGGCAGGACAGAAAGCGCCACAGCTTGCCCTTaGCCTTCCCCACTGTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: YKAEKAHILYTHLGRTESATACP*PSPLWT Trigger: AGTCCACAGTGGGGAAGGCCAAGGGCAAGCTGTGGC...GCTTTCTGTCCTGCCTAAGTGTGTGTAAAGGATGTGTGCTTTTTCTGCCTTATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR CCA 90 bp | GAGAACTCTGAAACACAAGATGATCAAAGGCCAGTGTTACTGCCTCCTCCCTTTTGGTGGCCATGTTGTTaGGGTGGCCCACGAACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ENSETQDDQRPVLLPPPFWWPCC*GGPRTS Trigger: AGAAGTTCGTGGGCCACCCCAACAACATGGCCACCA...AAAGGGAGGAGGCAGTAACACTGGCCTTTGATCATCTTGTGTTTCAGAGTTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR GCA 90 bp | CAGGGTGTTAAGCAAGCGCAGGGGTGGTGCAGGCGGACAGTGACAAATGGTGACTCTCCATTAAAATTTTaGAGCTGTGCAGCATATTCA | + |
|
Preference number: 4 (lower is better) Translates to: QGVKQAQGWCRRTVTNGDSPLKF*SCAAYS Trigger: TGAATATGCTGCACAGCTGCAAAATTTTAATGGAGA...GTCACCATTTGTCACTGTCCGCCTGCACCACCCCTGCGCTTGCTTAACACCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR GCA 90 bp | TTGACAATAGTCCCTTCGGTGTTATTATGCCAGGCCTTCAGTGCTGACCAGATTACTCTCCTGTTTGGCTaGACTGATGGTCCCGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LTIVPSVLLCQAFSADQITLLFG*TDGPVR Trigger: TCTGACGGGACCATCAGTGCAGCCAAACAGGAGAGT...AATCTGGTCAGCACTGAAGGCCTGGCATAATAACACCGAAGGGACTATTGTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR GCA 90 bp | TCTCCTCTAAGAACACGCCTGCCACACTTTCTTCCTCCACTCCAGACTGTCCCTGATGATTTATGTCACTaGTGTGTCTTCTGTCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: SPLRTRLPHFLPPLQTVPDDLCH*CVFCHL Trigger: GAGGTGACAGAAGACACAGCAGTGACATAAATCATC...AGGGACAGTCTGGAGTGGAGGAAGAAAGTGTGGCAGGCGTGTTCTTAGAGGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR CCA 90 bp | TTGGTAAGACCAAAAGGGGCATTCAGTTTAAAGTGTCTGTCCCAAATGTACCTAGCCACAGCTTGCCCTTaGCCTTCCCCACTGTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: LVRPKGAFSLKCLSQMYLATACP*PSPLWT Trigger: AGTCCACAGTGGGGAAGGCCAAGGGCAAGCTGTGGC...TAGGTACATTTGGGACAGACACTTTAAACTGAATGCCCCTTTTGGTCTTACCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR CCA 90 bp | TGGAAGCAGCTGACTTTTGACAATAGTCCCTTCGGTGTTATTATGCCAGGCCTTAGGCTGCAGACTTCCTaGATCCCCCATCTGTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: WKQLTFDNSPFGVIMPGLRLQTS*IPHLWI Trigger: AATCCACAGATGGGGGATCCAGGAAGTCTGCAGCCT...AAGGCCTGGCATAATAACACCGAAGGGACTATTGTCAAAAGTCAGCTGCTTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CCA 90 bp | TCTCCTCTAAGAACACGCCTGCCACACTTTCTTCCTCCACTCCAGACTGTCCCTCATCTATGTATGTTGTaGGAACGTAGCCTTCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SPLRTRLPHFLPPLQTVPHLCML*ERSLLH Trigger: GTGAAGAAGGCTACGTTCCCACAACATACATAGATG...AGGGACAGTCTGGAGTGGAGGAAGAAAGTGTGGCAGGCGTGTTCTTAGAGGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR TCA 90 bp | TTGACAATAGTCCCTTCGGTGTTATTATGCCAGGCCTTCAGTGCTGACCAGATTCTGGTGGCAAATGACTaGAATCTTCTAGTGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LTIVPSVLLCQAFSADQILVAND*NLLVLG Trigger: GCCCAGCACTAGAAGATTTCAGTCATTTGCCACCAG...AATCTGGTCAGCACTGAAGGCCTGGCATAATAACACCGAAGGGACTATTGTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR GCA 90 bp | GATGACGACAGTCCTAACGGACAGCCCAAAATAAGACAAACTTTAAGACAGCTCACTCTCCTGTTTGGCTaGACTGATGGTCCCGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: DDDSPNGQPKIRQTLRQLTLLFG*TDGPVR Trigger: TCTGACGGGACCATCAGTGCAGCCAAACAGGAGAGT...GAGCTGTCTTAAAGTTTGTCTTATTTTGGGCTGTCCGTTAGGACTGTCGTCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR GCA 90 bp | AGTTGGCTACTAAACACACCAGAGAACTCTGAAACACAAGATGATCAAAGGCCATGGTCTGCTTCCTTCTaGAGCCCTCGGTTAAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SWLLNTPENSETQDDQRPWSASF*SPRLSS Trigger: CGAGCTTAACCGAGGGCTGCAGAAGGAAGCAGACCA...TGGCCTTTGATCATCTTGTGTTTCAGAGTTCTCTGGTGTGTTTAGTAGCCAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR GCA 90 bp | TATAAGGCAGAAAAAGCACACATCCTTTACACACACTTAGGCAGGACAGAAAGCTGGTCTGCTTCCTTCTaGAGCCCTCGGTTAAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: YKAEKAHILYTHLGRTESWSASF*SPRLSS Trigger: CGAGCTTAACCGAGGGCTGCAGAAGGAAGCAGACCA...GCTTTCTGTCCTGCCTAAGTGTGTGTAAAGGATGTGTGCTTTTTCTGCCTTATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR GCA 90 bp | TTGACAATAGTCCCTTCGGTGTTATTATGCCAGGCCTTCAGTGCTGACCAGATTTGCTTCTTTTTGGTCTaGTTCCTTCTGCAGCCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LTIVPSVLLCQAFSADQICFFLV*FLLQPS Trigger: CGAGGGCTGCAGAAGGAAGCAGACCAAAAAGAAGCA...AATCTGGTCAGCACTGAAGGCCTGGCATAATAACACCGAAGGGACTATTGTCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR GCA 90 bp | TTGACAATAGTCCCTTCGGTGTTATTATGCCAGGCCTTCAGTGCTGACCAGATTTCTGCTAATTTAGGCTaGAGACTTCCTGGATCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LTIVPSVLLCQAFSADQISANLG*RLPGSP Trigger: GGGGGATCCAGGAAGTCTGCAGCCTAAATTAGCAGA...AATCTGGTCAGCACTGAAGGCCTGGCATAATAACACCGAAGGGACTATTGTCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR GCA 90 bp | GAGAACTCTGAAACACAAGATGATCAAAGGCCAGTGTTACTGCCTCCTCCCTTTTCTGCTAATTTAGGCTaGAGACTTCCTGGATCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: ENSETQDDQRPVLLPPPFSANLG*RLPGSP Trigger: GGGGGATCCAGGAAGTCTGCAGCCTAAATTAGCAGA...AAAGGGAGGAGGCAGTAACACTGGCCTTTGATCATCTTGTGTTTCAGAGTTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR CCA 90 bp | TCTCCTCTAAGAACACGCCTGCCACACTTTCTTCCTCCACTCCAGACTGTCCCTTTTCAACATCTGCCTTaGTGGCATTGGTGTCATTAT | + |
|
Preference number: 4 (lower is better) Translates to: SPLRTRLPHFLPPLQTVPFQHLP*WHWCHY Trigger: ATAATGACACCAATGCCACCAAGGCAGATGTTGAAA...AGGGACAGTCTGGAGTGGAGGAAGAAAGTGTGGCAGGCGTGTTCTTAGAGGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR CCA 90 bp | TGGAAGCAGCTGACTTTTGACAATAGTCCCTTCGGTGTTATTATGCCAGGCCTTTGGGGACTGTGGCTTTaGCTTCTTTCCAAAGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: WKQLTFDNSPFGVIMPGLWGLWL*LLSKEP Trigger: TGGCTCTTTGGAAAGAAGCCAAAGCCACAGTCCCCA...AAGGCCTGGCATAATAACACCGAAGGGACTATTGTCAAAAGTCAGCTGCTTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CCA 90 bp | GAGAACTCTGAAACACAAGATGATCAAAGGCCAGTGTTACTGCCTCCTCCCTTTCCGCCTCTGCTCTGGTaGCAAATGACTGAAATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ENSETQDDQRPVLLPPPFPPLLW*QMTEIF Trigger: GAAGATTTCAGTCATTTGCCACCAGAGCAGAGGCGG...AAAGGGAGGAGGCAGTAACACTGGCCTTTGATCATCTTGTGTTTCAGAGTTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR CCA 90 bp | TGGAAGCAGCTGACTTTTGACAATAGTCCCTTCGGTGTTATTATGCCAGGCCTTCTTCCGCCTCTGCTCTaGTGGCAAATGACTGAAATC | + |
|
Preference number: 4 (lower is better) Translates to: WKQLTFDNSPFGVIMPGLLPPLL*WQMTEI Trigger: GATTTCAGTCATTTGCCACCAGAGCAGAGGCGGAAG...AAGGCCTGGCATAATAACACCGAAGGGACTATTGTCAAAAGTCAGCTGCTTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CCA 90 bp | GAGAACTCTGAAACACAAGATGATCAAAGGCCAGTGTTACTGCCTCCTCCCTTTTTGGCTCTTCATCTTTaGAGGAGCGTTTGGGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: ENSETQDDQRPVLLPPPFLALHL*RSVWDS Trigger: ACTGTCCCAAACGCTCCTCCAAAGATGAAGAGCCAA...AAAGGGAGGAGGCAGTAACACTGGCCTTTGATCATCTTGTGTTTCAGAGTTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR CCA 90 bp | TTGACAATAGTCCCTTCGGTGTTATTATGCCAGGCCTTCAGTGCTGACCAGATTTTGGCTCTTCATCTTTaGAGGAGCGTTTGGGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: LTIVPSVLLCQAFSADQILALHL*RSVWDS Trigger: ACTGTCCCAAACGCTCCTCCAAAGATGAAGAGCCAA...AATCTGGTCAGCACTGAAGGCCTGGCATAATAACACCGAAGGGACTATTGTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR CCA 90 bp | TTGACAATAGTCCCTTCGGTGTTATTATGCCAGGCCTTCAGTGCTGACCAGATTCTGCCTTGGTGGCATTaGTGTCATTATCCAACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LTIVPSVLLCQAFSADQILPWWH*CHYPTS Trigger: AGAGGTTGGATAATGACACCAATGCCACCAAGGCAG...AATCTGGTCAGCACTGAAGGCCTGGCATAATAACACCGAAGGGACTATTGTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CCA 90 bp | TGGAAGCAGCTGACTTTTGACAATAGTCCCTTCGGTGTTATTATGCCAGGCCTTCTGCCTTGGTGGCATTaGTGTCATTATCCAACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: WKQLTFDNSPFGVIMPGLLPWWH*CHYPTS Trigger: AGAGGTTGGATAATGACACCAATGCCACCAAGGCAG...AAGGCCTGGCATAATAACACCGAAGGGACTATTGTCAAAAGTCAGCTGCTTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CCA 90 bp | TGGAAGCAGCTGACTTTTGACAATAGTCCCTTCGGTGTTATTATGCCAGGCCTTGAGAGTGTGAGAAACTaGGACCCATTAGGAGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: WKQLTFDNSPFGVIMPGLESVRN*DPLGVL Trigger: CAGTACTCCTAATGGGTCCCAGTTTCTCACACTCTC...AAGGCCTGGCATAATAACACCGAAGGGACTATTGTCAAAAGTCAGCTGCTTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CCA 90 bp | GAGAACTCTGAAACACAAGATGATCAAAGGCCAGTGTTACTGCCTCCTCCCTTTGAGAGTGTGAGAAACTaGGACCCATTAGGAGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: ENSETQDDQRPVLLPPPFESVRN*DPLGVL Trigger: CAGTACTCCTAATGGGTCCCAGTTTCTCACACTCTC...AAAGGGAGGAGGCAGTAACACTGGCCTTTGATCATCTTGTGTTTCAGAGTTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR CCA 90 bp | TGGAACGTTTGCAGTAGGGAAGTTTTAGCAGCATACACAGATACTAAGATGGAATGGTGGCCATGTTGTTaGGGTGGCCCACGAACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: WNVCSREVLAAYTDTKMEWWPCC*GGPRTS Trigger: AGAAGTTCGTGGGCCACCCCAACAACATGGCCACCA...TTCCATCTTAGTATCTGTGTATGCTGCTAAAACTTCCCTACTGCAAACGTTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR TCA 90 bp | GAGAACTCTGAAACACAAGATGATCAAAGGCCAGTGTTACTGCCTCCTCCCTTTTGCTCTGGTGGCAAATaGCTGAAATCTTCTAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ENSETQDDQRPVLLPPPFCSGGK*LKSSSA Trigger: AGCACTAGAAGATTTCAGTCATTTGCCACCAGAGCA...AAAGGGAGGAGGCAGTAACACTGGCCTTTGATCATCTTGTGTTTCAGAGTTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR TCA 90 bp | TGGAAGCAGCTGACTTTTGACAATAGTCCCTTCGGTGTTATTATGCCAGGCCTTTGCTCTGGTGGCAAATaGCTGAAATCTTCTAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: WKQLTFDNSPFGVIMPGLCSGGK*LKSSSA Trigger: AGCACTAGAAGATTTCAGTCATTTGCCACCAGAGCA...AAGGCCTGGCATAATAACACCGAAGGGACTATTGTCAAAAGTCAGCTGCTTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR GCA 90 bp | AGTTGGCTACTAAACACACCAGAGAACTCTGAAACACAAGATGATCAAAGGCCAGGCCTTTTCAACATCTaGCTTGGTGGCATTGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SWLLNTPENSETQDDQRPGLFNI*LGGIGV Trigger: GACACCAATGCCACCAAGGCAGATGTTGAAAAGGCC...TGGCCTTTGATCATCTTGTGTTTCAGAGTTCTCTGGTGTGTTTAGTAGCCAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR GCA 90 bp | TATAAGGCAGAAAAAGCACACATCCTTTACACACACTTAGGCAGGACAGAAAGCGGCCTTTTCAACATCTaGCTTGGTGGCATTGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: YKAEKAHILYTHLGRTESGLFNI*LGGIGV Trigger: GACACCAATGCCACCAAGGCAGATGTTGAAAAGGCC...GCTTTCTGTCCTGCCTAAGTGTGTGTAAAGGATGTGTGCTTTTTCTGCCTTATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR GCA 90 bp | GCAGCATTTGAATGGAAGCAGCTGACTTTTGACAATAGTCCCTTCGGTGTTATTTGCTTCTTTTTGGTCTaGTTCCTTCTGCAGCCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: AAFEWKQLTFDNSPFGVICFFLV*FLLQPS Trigger: CGAGGGCTGCAGAAGGAAGCAGACCAAAAAGAAGCA...AATAACACCGAAGGGACTATTGTCAAAAGTCAGCTGCTTCCATTCAAATGCTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR GCA 90 bp | GCAGCATTTGAATGGAAGCAGCTGACTTTTGACAATAGTCCCTTCGGTGTTATTTCTGCTAATTTAGGCTaGAGACTTCCTGGATCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: AAFEWKQLTFDNSPFGVISANLG*RLPGSP Trigger: GGGGGATCCAGGAAGTCTGCAGCCTAAATTAGCAGA...AATAACACCGAAGGGACTATTGTCAAAAGTCAGCTGCTTCCATTCAAATGCTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CCA 90 bp | TGGAAGCAGCTGACTTTTGACAATAGTCCCTTCGGTGTTATTATGCCAGGCCTTCAACATCTGCCTTGGTaGCATTGGTGTCATTATCCA | + |
|
Preference number: 4 (lower is better) Translates to: WKQLTFDNSPFGVIMPGLQHLPW*HWCHYP Trigger: TGGATAATGACACCAATGCCACCAAGGCAGATGTTG...AAGGCCTGGCATAATAACACCGAAGGGACTATTGTCAAAAGTCAGCTGCTTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CCA 90 bp | TTGACAATAGTCCCTTCGGTGTTATTATGCCAGGCCTTCAGTGCTGACCAGATTGGTTCAACTGCTGTTTaGCCTTTTCAACATCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LTIVPSVLLCQAFSADQIGSTAV*PFQHLP Trigger: AGGCAGATGTTGAAAAGGCCAAACAGCAGTTGAACC...AATCTGGTCAGCACTGAAGGCCTGGCATAATAACACCGAAGGGACTATTGTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CCA 90 bp | GAGAACTCTGAAACACAAGATGATCAAAGGCCAGTGTTACTGCCTCCTCCCTTTGGTTCAACTGCTGTTTaGCCTTTTCAACATCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ENSETQDDQRPVLLPPPFGSTAV*PFQHLP Trigger: AGGCAGATGTTGAAAAGGCCAAACAGCAGTTGAACC...AAAGGGAGGAGGCAGTAACACTGGCCTTTGATCATCTTGTGTTTCAGAGTTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR CCA 90 bp | GAGAACTCTGAAACACAAGATGATCAAAGGCCAGTGTTACTGCCTCCTCCCTTTTGGTCCCGTCAGAAATaGTTCTGTAAATGTGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: ENSETQDDQRPVLLPPPFWSRQK*FCKCAD Trigger: GTCAGCACATTTACAGAACCATTTCTGACGGGACCA...AAAGGGAGGAGGCAGTAACACTGGCCTTTGATCATCTTGTGTTTCAGAGTTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR CCA 90 bp | AGTTGGCTACTAAACACACCAGAGAACTCTGAAACACAAGATGATCAAAGGCCATGGGGACTGTGGCTTTaGCTTCTTTCCAAAGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SWLLNTPENSETQDDQRPWGLWL*LLSKEP Trigger: TGGCTCTTTGGAAAGAAGCCAAAGCCACAGTCCCCA...TGGCCTTTGATCATCTTGTGTTTCAGAGTTCTCTGGTGTGTTTAGTAGCCAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR CCA 90 bp | AGTTGGCTACTAAACACACCAGAGAACTCTGAAACACAAGATGATCAAAGGCCACTTCCGCCTCTGCTCTaGTGGCAAATGACTGAAATC | + |
|
Preference number: 4 (lower is better) Translates to: SWLLNTPENSETQDDQRPLPPLL*WQMTEI Trigger: GATTTCAGTCATTTGCCACCAGAGCAGAGGCGGAAG...TGGCCTTTGATCATCTTGTGTTTCAGAGTTCTCTGGTGTGTTTAGTAGCCAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR CCA 90 bp | TGGAAGCAGCTGACTTTTGACAATAGTCCCTTCGGTGTTATTATGCCAGGCCTTCATGCCTCATTCTTGTaGATTTCCATTCGTAAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: WKQLTFDNSPFGVIMPGLHASFL*ISIRKR Trigger: CCGCTTACGAATGGAAATCCACAAGAATGAGGCATG...AAGGCCTGGCATAATAACACCGAAGGGACTATTGTCAAAAGTCAGCTGCTTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CCA 90 bp | ATACTTCAGGTTCACAGACTATGTCTTCATGTCAAAACTGGAACGTTTGCAGTATGGTGGCCATGTTGTTaGGGTGGCCCACGAACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ILQVHRLCLHVKTGTFAVWWPCC*GGPRTS Trigger: AGAAGTTCGTGGGCCACCCCAACAACATGGCCACCA...TACTGCAAACGTTCCAGTTTTGACATGAAGACATAGTCTGTGAACCTGAAGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR TCA 90 bp | GAGAACTCTGAAACACAAGATGATCAAAGGCCAGTGTTACTGCCTCCTCCCTTTATGTCAAGGTATTGTTaGGCTTTTCGTCCTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ENSETQDDQRPVLLPPPFMSRYC*AFRPSW Trigger: CCAAGAAGGACGAAAAGCTCAACAATACCTTGACAT...AAAGGGAGGAGGCAGTAACACTGGCCTTTGATCATCTTGTGTTTCAGAGTTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR TCA 90 bp | TTGACAATAGTCCCTTCGGTGTTATTATGCCAGGCCTTCAGTGCTGACCAGATTATGTCAAGGTATTGTTaGGCTTTTCGTCCTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LTIVPSVLLCQAFSADQIMSRYC*AFRPSW Trigger: CCAAGAAGGACGAAAAGCTCAACAATACCTTGACAT...AATCTGGTCAGCACTGAAGGCCTGGCATAATAACACCGAAGGGACTATTGTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR TCA 90 bp | TTGACAATAGTCCCTTCGGTGTTATTATGCCAGGCCTTCAGTGCTGACCAGATTAATAACTTTGCGTTCTaGGTCTGCAAACCCTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LTIVPSVLLCQAFSADQINNFAF*VCKPSV Trigger: TACAGAGGGTTTGCAGACTCAGAACGCAAAGTTATT...AATCTGGTCAGCACTGAAGGCCTGGCATAATAACACCGAAGGGACTATTGTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR TCA 90 bp | TGGAAGCAGCTGACTTTTGACAATAGTCCCTTCGGTGTTATTATGCCAGGCCTTGTTCAAAGCCAGACTTaGAGGAGTCTACTACCATTT | + |
|
Preference number: 4 (lower is better) Translates to: WKQLTFDNSPFGVIMPGLVQSQT*RSLLPF Trigger: AAATGGTAGTAGACTCCTTCAAGTCTGGCTTTGAAC...AAGGCCTGGCATAATAACACCGAAGGGACTATTGTCAAAAGTCAGCTGCTTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR TCA 90 bp | TGGAACGTTTGCAGTAGGGAAGTTTTAGCAGCATACACAGATACTAAGATGGAACTGGTGGCAAATGACTaGAATCTTCTAGTGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: WNVCSREVLAAYTDTKMELVAND*NLLVLG Trigger: GCCCAGCACTAGAAGATTTCAGTCATTTGCCACCAG...TTCCATCTTAGTATCTGTGTATGCTGCTAAAACTTCCCTACTGCAAACGTTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR TCA 90 bp | TTGGTAAGACCAAAAGGGGCATTCAGTTTAAAGTGTCTGTCCCAAATGTACCTACTGGTGGCAAATGACTaGAATCTTCTAGTGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LVRPKGAFSLKCLSQMYLLVAND*NLLVLG Trigger: GCCCAGCACTAGAAGATTTCAGTCATTTGCCACCAG...TAGGTACATTTGGGACAGACACTTTAAACTGAATGCCCCTTTTGGTCTTACCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR GCA 90 bp | GAGAACTCTGAAACACAAGATGATCAAAGGCCAGTGTTACTGCCTCCTCCCTTTATTCCCCATTGGGTATaGTTATCTAAGCTGTCGAAC | + |
|
Preference number: 4 (lower is better) Translates to: ENSETQDDQRPVLLPPPFIPHWV*LSKLSN Trigger: GTTCGACAGCTTAGATAAGCATACCCAATGGGGAAT...AAAGGGAGGAGGCAGTAACACTGGCCTTTGATCATCTTGTGTTTCAGAGTTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR GCA 90 bp | TGGAAGCAGCTGACTTTTGACAATAGTCCCTTCGGTGTTATTATGCCAGGCCTTAACTTCAGAGAGCCATaGCTCATTCTTGTGGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: WKQLTFDNSPFGVIMPGLNFREP*LILVDF Trigger: GAAATCCACAAGAATGAGGCATGGCTCTCTGAAGTT...AAGGCCTGGCATAATAACACCGAAGGGACTATTGTCAAAAGTCAGCTGCTTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR GCA 90 bp | TGGAAGCAGCTGACTTTTGACAATAGTCCCTTCGGTGTTATTATGCCAGGCCTTGATGATTTATGTCACTaGTGTGTCTTCTGTCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: WKQLTFDNSPFGVIMPGLDDLCH*CVFCHL Trigger: GAGGTGACAGAAGACACAGCAGTGACATAAATCATC...AAGGCCTGGCATAATAACACCGAAGGGACTATTGTCAAAAGTCAGCTGCTTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CCA 90 bp | GATGACGACAGTCCTAACGGACAGCCCAAAATAAGACAAACTTTAAGACAGCTCCAACATCTGCCTTGGTaGCATTGGTGTCATTATCCA | + |
|
Preference number: 4 (lower is better) Translates to: DDDSPNGQPKIRQTLRQLQHLPW*HWCHYP Trigger: TGGATAATGACACCAATGCCACCAAGGCAGATGTTG...GAGCTGTCTTAAAGTTTGTCTTATTTTGGGCTGTCCGTTAGGACTGTCGTCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CCA 90 bp | TGGAACGTTTGCAGTAGGGAAGTTTTAGCAGCATACACAGATACTAAGATGGAACTTCCGCCTCTGCTCTaGTGGCAAATGACTGAAATC | + |
|
Preference number: 4 (lower is better) Translates to: WNVCSREVLAAYTDTKMELPPLL*WQMTEI Trigger: GATTTCAGTCATTTGCCACCAGAGCAGAGGCGGAAG...TTCCATCTTAGTATCTGTGTATGCTGCTAAAACTTCCCTACTGCAAACGTTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CCA 90 bp | GAGAACTCTGAAACACAAGATGATCAAAGGCCAGTGTTACTGCCTCCTCCCTTTTGGATCCCCCATCTGTaGATTTTTCTCATACACATC | + |
|
Preference number: 4 (lower is better) Translates to: ENSETQDDQRPVLLPPPFWIPHL*IFLIHI Trigger: GATGTGTATGAGAAAAATCCACAGATGGGGGATCCA...AAAGGGAGGAGGCAGTAACACTGGCCTTTGATCATCTTGTGTTTCAGAGTTCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR CCA 90 bp | TGGAAGCAGCTGACTTTTGACAATAGTCCCTTCGGTGTTATTATGCCAGGCCTTTGGATCCCCCATCTGTaGATTTTTCTCATACACATC | + |
|
Preference number: 4 (lower is better) Translates to: WKQLTFDNSPFGVIMPGLWIPHL*IFLIHI Trigger: GATGTGTATGAGAAAAATCCACAGATGGGGGATCCA...AAGGCCTGGCATAATAACACCGAAGGGACTATTGTCAAAAGTCAGCTGCTTCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CCA 90 bp | GCAGCATTTGAATGGAAGCAGCTGACTTTTGACAATAGTCCCTTCGGTGTTATTTCATCAAACTCACTGTaGTGGCCATGTTGTTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: AAFEWKQLTFDNSPFGVISSNSL*WPCCWG Trigger: ACCCCAACAACATGGCCACCACAGTGAGTTTGATGA...AATAACACCGAAGGGACTATTGTCAAAAGTCAGCTGCTTCCATTCAAATGCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CCA 90 bp | TGGAAGCAGCTGACTTTTGACAATAGTCCCTTCGGTGTTATTATGCCAGGCCTTCATCTATGTATGTTGTaGGAACGTAGCCTTCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: WKQLTFDNSPFGVIMPGLHLCML*ERSLLH Trigger: GTGAAGAAGGCTACGTTCCCACAACATACATAGATG...AAGGCCTGGCATAATAACACCGAAGGGACTATTGTCAAAAGTCAGCTGCTTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| 3UTR CAA 72 bp | AGAACAGGCTTGCTTATTTTAATTCATCAGTCACTGTaGCTTCTGAGGTGCAGGGGGCAGGAAACATTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: RTGLLILIHQSL*LLRCRGQETFY Trigger: GTAGAATGTTTCCTGCCCCCTGCACCTCAGAAGCAACAGTGACTGATGAATTAAAATAAGCAAGCCTGTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR TCA 90 bp | ATACTTCAGGTTCACAGACTATGTCTTCATGTCAAAACTGGAACGTTTGCAGTACTGGTGGCAAATGACTaGAATCTTCTAGTGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ILQVHRLCLHVKTGTFAVLVAND*NLLVLG Trigger: GCCCAGCACTAGAAGATTTCAGTCATTTGCCACCAG...TACTGCAAACGTTCCAGTTTTGACATGAAGACATAGTCTGTGAACCTGAAGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR TCA 90 bp | TATAAGGCAGAAAAAGCACACATCCTTTACACACACTTAGGCAGGACAGAAAGCTGCTCTGGTGGCAAATaGCTGAAATCTTCTAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: YKAEKAHILYTHLGRTESCSGGK*LKSSSA Trigger: AGCACTAGAAGATTTCAGTCATTTGCCACCAGAGCA...GCTTTCTGTCCTGCCTAAGTGTGTGTAAAGGATGTGTGCTTTTTCTGCCTTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR TCA 90 bp | GAGAACTCTGAAACACAAGATGATCAAAGGCCAGTGTTACTGCCTCCTCCCTTTCATCCTTCATTTTGTTaGGTGCTTCTTTTTGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ENSETQDDQRPVLLPPPFHPSFC*VLLFGL Trigger: CAGACCAAAAAGAAGCACTCAACAAAATGAAGGATG...AAAGGGAGGAGGCAGTAACACTGGCCTTTGATCATCTTGTGTTTCAGAGTTCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR GCA 90 bp | GATGACGACAGTCCTAACGGACAGCCCAAAATAAGACAAACTTTAAGACAGCTCTCACCATATACTCTGTaGGCCATTTCTTCTGCTACT | + |
|
Preference number: 4 (lower is better) Translates to: DDDSPNGQPKIRQTLRQLSPYTL*AISSAT Trigger: AGTAGCAGAAGAAATGGCGCACAGAGTATATGGTGA...GAGCTGTCTTAAAGTTTGTCTTATTTTGGGCTGTCCGTTAGGACTGTCGTCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR GCA 90 bp | TGGAAGCAGCTGACTTTTGACAATAGTCCCTTCGGTGTTATTATGCCAGGCCTTCGTCCTTCTTGGAGATaGATTTTTCTTTCCGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: WKQLTFDNSPFGVIMPGLRPSWR*IFLSVF Trigger: GAAAACGGAAAGAAAAATGCATCTCCAAGAAGGACG...AAGGCCTGGCATAATAACACCGAAGGGACTATTGTCAAAAGTCAGCTGCTTCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR GCA 90 bp | GCAGCATTTGAATGGAAGCAGCTGACTTTTGACAATAGTCCCTTCGGTGTTATTCTCATAACTCTGCTGTaGTTTCTCCGCTTCTCTACA | + |
|
Preference number: 4 (lower is better) Translates to: AAFEWKQLTFDNSPFGVILITLL*FLRFST Trigger: TGTAGAGAAGCGGAGAAAGCACAGCAGAGTTATGAG...AATAACACCGAAGGGACTATTGTCAAAAGTCAGCTGCTTCCATTCAAATGCTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR GCA 90 bp | ATACTTCAGGTTCACAGACTATGTCTTCATGTCAAAACTGGAACGTTTGCAGTAGGCCTTTTCAACATCTaGCTTGGTGGCATTGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: ILQVHRLCLHVKTGTFAVGLFNI*LGGIGV Trigger: GACACCAATGCCACCAAGGCAGATGTTGAAAAGGCC...TACTGCAAACGTTCCAGTTTTGACATGAAGACATAGTCTGTGAACCTGAAGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR GCA 90 bp | ATACTTCAGGTTCACAGACTATGTCTTCATGTCAAAACTGGAACGTTTGCAGTATGCTTCTTTTTGGTCTaGTTCCTTCTGCAGCCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: ILQVHRLCLHVKTGTFAVCFFLV*FLLQPS Trigger: CGAGGGCTGCAGAAGGAAGCAGACCAAAAAGAAGCA...TACTGCAAACGTTCCAGTTTTGACATGAAGACATAGTCTGTGAACCTGAAGTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR GCA 90 bp | GATGACGACAGTCCTAACGGACAGCCCAAAATAAGACAAACTTTAAGACAGCTCGATGATTTATGTCACTaGTGTGTCTTCTGTCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: DDDSPNGQPKIRQTLRQLDDLCH*CVFCHL Trigger: GAGGTGACAGAAGACACAGCAGTGACATAAATCATC...GAGCTGTCTTAAAGTTTGTCTTATTTTGGGCTGTCCGTTAGGACTGTCGTCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR GCA 90 bp | TTGACAATAGTCCCTTCGGTGTTATTATGCCAGGCCTTCAGTGCTGACCAGATTATCAAAAGGGTAGATTaGTTTGCAGTGTCCAATAGC | + |
|
Preference number: 4 (lower is better) Translates to: LTIVPSVLLCQAFSADQIIKRVD*FAVSNS Trigger: GCTATTGGACACTGCAAAGCAATCTACCCTTTTGAT...AATCTGGTCAGCACTGAAGGCCTGGCATAATAACACCGAAGGGACTATTGTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
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| CDS-3UTR CCA 90 bp | AGTTGGCTACTAAACACACCAGAGAACTCTGAAACACAAGATGATCAAAGGCCACAACATCTGCCTTGGTaGCATTGGTGTCATTATCCA | + |
|
Preference number: 4 (lower is better) Translates to: SWLLNTPENSETQDDQRPQHLPW*HWCHYP Trigger: TGGATAATGACACCAATGCCACCAAGGCAGATGTTG...TGGCCTTTGATCATCTTGTGTTTCAGAGTTCTCTGGTGTGTTTAGTAGCCAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
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| CDS-3UTR CCA 90 bp | AGTTGGCTACTAAACACACCAGAGAACTCTGAAACACAAGATGATCAAAGGCCATGGTCCCGTCAGAAATaGTTCTGTAAATGTGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SWLLNTPENSETQDDQRPWSRQK*FCKCAD Trigger: GTCAGCACATTTACAGAACCATTTCTGACGGGACCA...TGGCCTTTGATCATCTTGTGTTTCAGAGTTCTCTGGTGTGTTTAGTAGCCAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
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| CDS-3UTR CCA 90 bp | TATAAGGCAGAAAAAGCACACATCCTTTACACACACTTAGGCAGGACAGAAAGCTGGTCCCGTCAGAAATaGTTCTGTAAATGTGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: YKAEKAHILYTHLGRTESWSRQK*FCKCAD Trigger: GTCAGCACATTTACAGAACCATTTCTGACGGGACCA...GCTTTCTGTCCTGCCTAAGTGTGTGTAAAGGATGTGTGCTTTTTCTGCCTTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR CCA 90 bp | ATACTTCAGGTTCACAGACTATGTCTTCATGTCAAAACTGGAACGTTTGCAGTACCGCCTCTGCTCTGGTaGCAAATGACTGAAATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ILQVHRLCLHVKTGTFAVPPLLW*QMTEIF Trigger: GAAGATTTCAGTCATTTGCCACCAGAGCAGAGGCGG...TACTGCAAACGTTCCAGTTTTGACATGAAGACATAGTCTGTGAACCTGAAGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CCA 90 bp | ATACTTCAGGTTCACAGACTATGTCTTCATGTCAAAACTGGAACGTTTGCAGTACTTCCGCCTCTGCTCTaGTGGCAAATGACTGAAATC | + |
|
Preference number: 4 (lower is better) Translates to: ILQVHRLCLHVKTGTFAVLPPLL*WQMTEI Trigger: GATTTCAGTCATTTGCCACCAGAGCAGAGGCGGAAG...TACTGCAAACGTTCCAGTTTTGACATGAAGACATAGTCTGTGAACCTGAAGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CCA 90 bp | TATAAGGCAGAAAAAGCACACATCCTTTACACACACTTAGGCAGGACAGAAAGCCATGCCTCATTCTTGTaGATTTCCATTCGTAAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: YKAEKAHILYTHLGRTESHASFL*ISIRKR Trigger: CCGCTTACGAATGGAAATCCACAAGAATGAGGCATG...GCTTTCTGTCCTGCCTAAGTGTGTGTAAAGGATGTGTGCTTTTTCTGCCTTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR CCA 90 bp | TGGAACGTTTGCAGTAGGGAAGTTTTAGCAGCATACACAGATACTAAGATGGAATCATCAAACTCACTGTaGTGGCCATGTTGTTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: WNVCSREVLAAYTDTKMESSNSL*WPCCWG Trigger: ACCCCAACAACATGGCCACCACAGTGAGTTTGATGA...TTCCATCTTAGTATCTGTGTATGCTGCTAAAACTTCCCTACTGCAAACGTTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CCA 90 bp | TTGGTAAGACCAAAAGGGGCATTCAGTTTAAAGTGTCTGTCCCAAATGTACCTATCATCAAACTCACTGTaGTGGCCATGTTGTTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LVRPKGAFSLKCLSQMYLSSNSL*WPCCWG Trigger: ACCCCAACAACATGGCCACCACAGTGAGTTTGATGA...TAGGTACATTTGGGACAGACACTTTAAACTGAATGCCCCTTTTGGTCTTACCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR TCA 90 bp | GAGAACTCTGAAACACAAGATGATCAAAGGCCAGTGTTACTGCCTCCTCCCTTTGAGTCTACTACCATTTaGGAATCTCTTCTTTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: ENSETQDDQRPVLLPPPFESTTI*ESLLSS Trigger: TGATGAAAGAAGAGATTCTCAAATGGTAGTAGACTC...AAAGGGAGGAGGCAGTAACACTGGCCTTTGATCATCTTGTGTTTCAGAGTTCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR TCA 90 bp | TTGACAATAGTCCCTTCGGTGTTATTATGCCAGGCCTTCAGTGCTGACCAGATTGAGTCTACTACCATTTaGGAATCTCTTCTTTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: LTIVPSVLLCQAFSADQIESTTI*ESLLSS Trigger: TGATGAAAGAAGAGATTCTCAAATGGTAGTAGACTC...AATCTGGTCAGCACTGAAGGCCTGGCATAATAACACCGAAGGGACTATTGTCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR TCA 90 bp | GCAGCATTTGAATGGAAGCAGCTGACTTTTGACAATAGTCCCTTCGGTGTTATTGTTCAAAGCCAGACTTaGAGGAGTCTACTACCATTT | + |
|
Preference number: 4 (lower is better) Translates to: AAFEWKQLTFDNSPFGVIVQSQT*RSLLPF Trigger: AAATGGTAGTAGACTCCTTCAAGTCTGGCTTTGAAC...AATAACACCGAAGGGACTATTGTCAAAAGTCAGCTGCTTCCATTCAAATGCTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR GCA 90 bp | GAGAACTCTGAAACACAAGATGATCAAAGGCCAGTGTTACTGCCTCCTCCCTTTCTTCATTTTGTTGAGTaGTTCTTTTTGGTCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ENSETQDDQRPVLLPPPFLHFVE*FFLVCF Trigger: GAAGCAGACCAAAAAGAAGCACTCAACAAAATGAAG...AAAGGGAGGAGGCAGTAACACTGGCCTTTGATCATCTTGTGTTTCAGAGTTCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR GCA 90 bp | GCAGCATTTGAATGGAAGCAGCTGACTTTTGACAATAGTCCCTTCGGTGTTATTAACTTCAGAGAGCCATaGCTCATTCTTGTGGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: AAFEWKQLTFDNSPFGVINFREP*LILVDF Trigger: GAAATCCACAAGAATGAGGCATGGCTCTCTGAAGTT...AATAACACCGAAGGGACTATTGTCAAAAGTCAGCTGCTTCCATTCAAATGCTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR GCA 90 bp | GATGACGACAGTCCTAACGGACAGCCCAAAATAAGACAAACTTTAAGACAGCTCACGAACTTCTTGGTTTaGATCATCAGTGTAACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: DDDSPNGQPKIRQTLRQLTNFLV*IISVTS Trigger: GGAAGTTACACTGATGATGCAAACCAAGAAGTTCGT...GAGCTGTCTTAAAGTTTGTCTTATTTTGGGCTGTCCGTTAGGACTGTCGTCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR GCA 90 bp | GATGACGACAGTCCTAACGGACAGCCCAAAATAAGACAAACTTTAAGACAGCTCATCAAAAGGGTAGATTaGTTTGCAGTGTCCAATAGC | + |
|
Preference number: 4 (lower is better) Translates to: DDDSPNGQPKIRQTLRQLIKRVD*FAVSNS Trigger: GCTATTGGACACTGCAAAGCAATCTACCCTTTTGAT...GAGCTGTCTTAAAGTTTGTCTTATTTTGGGCTGTCCGTTAGGACTGTCGTCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR GCA 90 bp | TGGAAGCAGCTGACTTTTGACAATAGTCCCTTCGGTGTTATTATGCCAGGCCTTTTCACCTTCTTTCATTaGCAGAGTACCTTCATTATG | + |
|
Preference number: 4 (lower is better) Translates to: WKQLTFDNSPFGVIMPGLFTFFH*QSTFIM Trigger: CATAATGAAGGTACTCTGGCAATGAAAGAAGGTGAA...AAGGCCTGGCATAATAACACCGAAGGGACTATTGTCAAAAGTCAGCTGCTTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CCA 90 bp | ATACTTCAGGTTCACAGACTATGTCTTCATGTCAAAACTGGAACGTTTGCAGTACTGCCTTGGTGGCATTaGTGTCATTATCCAACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ILQVHRLCLHVKTGTFAVLPWWH*CHYPTS Trigger: AGAGGTTGGATAATGACACCAATGCCACCAAGGCAG...TACTGCAAACGTTCCAGTTTTGACATGAAGACATAGTCTGTGAACCTGAAGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CCA 90 bp | TTTGAATGGAAGCAGCTGACTTTTGACAATAGTCCCTTCGGTGTTATTATGCCACAACATCTGCCTTGGTaGCATTGGTGTCATTATCCA | + |
|
Preference number: 4 (lower is better) Translates to: FEWKQLTFDNSPFGVIMPQHLPW*HWCHYP Trigger: TGGATAATGACACCAATGCCACCAAGGCAGATGTTG...TGGCATAATAACACCGAAGGGACTATTGTCAAAAGTCAGCTGCTTCCATTCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CCA 90 bp | TTTGAATGGAAGCAGCTGACTTTTGACAATAGTCCCTTCGGTGTTATTATGCCATGGTCCCGTCAGAAATaGTTCTGTAAATGTGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: FEWKQLTFDNSPFGVIMPWSRQK*FCKCAD Trigger: GTCAGCACATTTACAGAACCATTTCTGACGGGACCA...TGGCATAATAACACCGAAGGGACTATTGTCAAAAGTCAGCTGCTTCCATTCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CCA 90 bp | ATACTTCAGGTTCACAGACTATGTCTTCATGTCAAAACTGGAACGTTTGCAGTAGAGAGTGTGAGAAACTaGGACCCATTAGGAGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: ILQVHRLCLHVKTGTFAVESVRN*DPLGVL Trigger: CAGTACTCCTAATGGGTCCCAGTTTCTCACACTCTC...TACTGCAAACGTTCCAGTTTTGACATGAAGACATAGTCTGTGAACCTGAAGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CCA 90 bp | TTTGAATGGAAGCAGCTGACTTTTGACAATAGTCCCTTCGGTGTTATTATGCCACATGCCTCATTCTTGTaGATTTCCATTCGTAAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: FEWKQLTFDNSPFGVIMPHASFL*ISIRKR Trigger: CCGCTTACGAATGGAAATCCACAAGAATGAGGCATG...TGGCATAATAACACCGAAGGGACTATTGTCAAAAGTCAGCTGCTTCCATTCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR TCA 90 bp | TTTGAATGGAAGCAGCTGACTTTTGACAATAGTCCCTTCGGTGTTATTATGCCAATGTCAAGGTATTGTTaGGCTTTTCGTCCTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: FEWKQLTFDNSPFGVIMPMSRYC*AFRPSW Trigger: CCAAGAAGGACGAAAAGCTCAACAATACCTTGACAT...TGGCATAATAACACCGAAGGGACTATTGTCAAAAGTCAGCTGCTTCCATTCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR TCA 90 bp | TGGAACGTTTGCAGTAGGGAAGTTTTAGCAGCATACACAGATACTAAGATGGAAAATAACTTTGCGTTCTaGGTCTGCAAACCCTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: WNVCSREVLAAYTDTKMENNFAF*VCKPSV Trigger: TACAGAGGGTTTGCAGACTCAGAACGCAAAGTTATT...TTCCATCTTAGTATCTGTGTATGCTGCTAAAACTTCCCTACTGCAAACGTTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR TCA 90 bp | TTGGTAAGACCAAAAGGGGCATTCAGTTTAAAGTGTCTGTCCCAAATGTACCTAGTTCAAAGCCAGACTTaGAGGAGTCTACTACCATTT | + |
|
Preference number: 4 (lower is better) Translates to: LVRPKGAFSLKCLSQMYLVQSQT*RSLLPF Trigger: AAATGGTAGTAGACTCCTTCAAGTCTGGCTTTGAAC...TAGGTACATTTGGGACAGACACTTTAAACTGAATGCCCCTTTTGGTCTTACCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR TCA 90 bp | GCAGCATTTGAATGGAAGCAGCTGACTTTTGACAATAGTCCCTTCGGTGTTATTCATCCTTCATTTTGTTaGGTGCTTCTTTTTGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: AAFEWKQLTFDNSPFGVIHPSFC*VLLFGL Trigger: CAGACCAAAAAGAAGCACTCAACAAAATGAAGGATG...AATAACACCGAAGGGACTATTGTCAAAAGTCAGCTGCTTCCATTCAAATGCTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR TCA 90 bp | AGTTGGCTACTAAACACACCAGAGAACTCTGAAACACAAGATGATCAAAGGCCACATCCTTCATTTTGTTaGGTGCTTCTTTTTGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SWLLNTPENSETQDDQRPHPSFC*VLLFGL Trigger: CAGACCAAAAAGAAGCACTCAACAAAATGAAGGATG...TGGCCTTTGATCATCTTGTGTTTCAGAGTTCTCTGGTGTGTTTAGTAGCCAACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR GCA 90 bp | TGGAACGTTTGCAGTAGGGAAGTTTTAGCAGCATACACAGATACTAAGATGGAAATTCCCCATTGGGTATaGTTATCTAAGCTGTCGAAC | + |
|
Preference number: 4 (lower is better) Translates to: WNVCSREVLAAYTDTKMEIPHWV*LSKLSN Trigger: GTTCGACAGCTTAGATAAGCATACCCAATGGGGAAT...TTCCATCTTAGTATCTGTGTATGCTGCTAAAACTTCCCTACTGCAAACGTTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR GCA 90 bp | GCAGCATTTGAATGGAAGCAGCTGACTTTTGACAATAGTCCCTTCGGTGTTATTCGTCCTTCTTGGAGATaGATTTTTCTTTCCGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: AAFEWKQLTFDNSPFGVIRPSWR*IFLSVF Trigger: GAAAACGGAAAGAAAAATGCATCTCCAAGAAGGACG...AATAACACCGAAGGGACTATTGTCAAAAGTCAGCTGCTTCCATTCAAATGCTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR GCA 90 bp | TTGACAATAGTCCCTTCGGTGTTATTATGCCAGGCCTTCAGTGCTGACCAGATTTCTCCATTAAAATTTTaGAGCTGTGCAGCATATTCA | + |
|
Preference number: 4 (lower is better) Translates to: LTIVPSVLLCQAFSADQISPLKF*SCAAYS Trigger: TGAATATGCTGCACAGCTGCAAAATTTTAATGGAGA...AATCTGGTCAGCACTGAAGGCCTGGCATAATAACACCGAAGGGACTATTGTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR GCA 90 bp | TTTGAATGGAAGCAGCTGACTTTTGACAATAGTCCCTTCGGTGTTATTATGCCAGATGATTTATGTCACTaGTGTGTCTTCTGTCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: FEWKQLTFDNSPFGVIMPDDLCH*CVFCHL Trigger: GAGGTGACAGAAGACACAGCAGTGACATAAATCATC...TGGCATAATAACACCGAAGGGACTATTGTCAAAAGTCAGCTGCTTCCATTCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR GCA 90 bp | GCAGCATTTGAATGGAAGCAGCTGACTTTTGACAATAGTCCCTTCGGTGTTATTATCAAAAGGGTAGATTaGTTTGCAGTGTCCAATAGC | + |
|
Preference number: 4 (lower is better) Translates to: AAFEWKQLTFDNSPFGVIIKRVD*FAVSNS Trigger: GCTATTGGACACTGCAAAGCAATCTACCCTTTTGAT...AATAACACCGAAGGGACTATTGTCAAAAGTCAGCTGCTTCCATTCAAATGCTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR GCA 90 bp | GATGACGACAGTCCTAACGGACAGCCCAAAATAAGACAAACTTTAAGACAGCTCTTCACCTTCTTTCATTaGCAGAGTACCTTCATTATG | + |
|
Preference number: 4 (lower is better) Translates to: DDDSPNGQPKIRQTLRQLFTFFH*QSTFIM Trigger: CATAATGAAGGTACTCTGGCAATGAAAGAAGGTGAA...GAGCTGTCTTAAAGTTTGTCTTATTTTGGGCTGTCCGTTAGGACTGTCGTCATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CCA 90 bp | GCAGCATTTGAATGGAAGCAGCTGACTTTTGACAATAGTCCCTTCGGTGTTATTAAGTCAATTCCCCATTaGGTATGCTTATCTAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AAFEWKQLTFDNSPFGVIKSIPH*VCLSKL Trigger: CAGCTTAGATAAGCATACCCAATGGGGAATTGACTT...AATAACACCGAAGGGACTATTGTCAAAAGTCAGCTGCTTCCATTCAAATGCTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR CCA 90 bp | AGTTGGCTACTAAACACACCAGAGAACTCTGAAACACAAGATGATCAAAGGCCAAAGTCAATTCCCCATTaGGTATGCTTATCTAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SWLLNTPENSETQDDQRPKSIPH*VCLSKL Trigger: CAGCTTAGATAAGCATACCCAATGGGGAATTGACTT...TGGCCTTTGATCATCTTGTGTTTCAGAGTTCTCTGGTGTGTTTAGTAGCCAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR CCA 90 bp | TTGACAATAGTCCCTTCGGTGTTATTATGCCAGGCCTTCAGTGCTGACCAGATTTCCGTTTTCAGATCATaGGCATATCTCATTAATTCA | + |
|
Preference number: 4 (lower is better) Translates to: LTIVPSVLLCQAFSADQISVFRS*AYLINS Trigger: TGAATTAATGAGATATGCCCATGATCTGAAAACGGA...AATCTGGTCAGCACTGAAGGCCTGGCATAATAACACCGAAGGGACTATTGTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR CCA 90 bp | TTTGAATGGAAGCAGCTGACTTTTGACAATAGTCCCTTCGGTGTTATTATGCCATGGATCCCCCATCTGTaGATTTTTCTCATACACATC | + |
|
Preference number: 4 (lower is better) Translates to: FEWKQLTFDNSPFGVIMPWIPHL*IFLIHI Trigger: GATGTGTATGAGAAAAATCCACAGATGGGGGATCCA...TGGCATAATAACACCGAAGGGACTATTGTCAAAAGTCAGCTGCTTCCATTCAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CCA 90 bp | TGGAACGTTTGCAGTAGGGAAGTTTTAGCAGCATACACAGATACTAAGATGGAACATCTATGTATGTTGTaGGAACGTAGCCTTCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: WNVCSREVLAAYTDTKMEHLCML*ERSLLH Trigger: GTGAAGAAGGCTACGTTCCCACAACATACATAGATG...TTCCATCTTAGTATCTGTGTATGCTGCTAAAACTTCCCTACTGCAAACGTTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR TCA 90 bp | GCAGCATTTGAATGGAAGCAGCTGACTTTTGACAATAGTCCCTTCGGTGTTATTGAGTCTACTACCATTTaGGAATCTCTTCTTTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: AAFEWKQLTFDNSPFGVIESTTI*ESLLSS Trigger: TGATGAAAGAAGAGATTCTCAAATGGTAGTAGACTC...AATAACACCGAAGGGACTATTGTCAAAAGTCAGCTGCTTCCATTCAAATGCTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
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| CDS-3UTR GCA 90 bp | ATACTTCAGGTTCACAGACTATGTCTTCATGTCAAAACTGGAACGTTTGCAGTAATTCCCCATTGGGTATaGTTATCTAAGCTGTCGAAC | + |
|
Preference number: 4 (lower is better) Translates to: ILQVHRLCLHVKTGTFAVIPHWV*LSKLSN Trigger: GTTCGACAGCTTAGATAAGCATACCCAATGGGGAAT...TACTGCAAACGTTCCAGTTTTGACATGAAGACATAGTCTGTGAACCTGAAGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR GCA 90 bp | TGGAACGTTTGCAGTAGGGAAGTTTTAGCAGCATACACAGATACTAAGATGGAACGTCCTTCTTGGAGATaGATTTTTCTTTCCGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: WNVCSREVLAAYTDTKMERPSWR*IFLSVF Trigger: GAAAACGGAAAGAAAAATGCATCTCCAAGAAGGACG...TTCCATCTTAGTATCTGTGTATGCTGCTAAAACTTCCCTACTGCAAACGTTCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
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| CDS-3UTR GCA 90 bp | TATAAGGCAGAAAAAGCACACATCCTTTACACACACTTAGGCAGGACAGAAAGCCTTCATTTTGTTGAGTaGTTCTTTTTGGTCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: YKAEKAHILYTHLGRTESLHFVE*FFLVCF Trigger: GAAGCAGACCAAAAAGAAGCACTCAACAAAATGAAG...GCTTTCTGTCCTGCCTAAGTGTGTGTAAAGGATGTGTGCTTTTTCTGCCTTATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
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| CDS-3UTR GCA 90 bp | TTGGTAAGACCAAAAGGGGCATTCAGTTTAAAGTGTCTGTCCCAAATGTACCTAACGAACTTCTTGGTTTaGATCATCAGTGTAACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LVRPKGAFSLKCLSQMYLTNFLV*IISVTS Trigger: GGAAGTTACACTGATGATGCAAACCAAGAAGTTCGT...TAGGTACATTTGGGACAGACACTTTAAACTGAATGCCCCTTTTGGTCTTACCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
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| CDS-3UTR GCA 90 bp | GCAGCATTTGAATGGAAGCAGCTGACTTTTGACAATAGTCCCTTCGGTGTTATTTTCACCTTCTTTCATTaGCAGAGTACCTTCATTATG | + |
|
Preference number: 4 (lower is better) Translates to: AAFEWKQLTFDNSPFGVIFTFFH*QSTFIM Trigger: CATAATGAAGGTACTCTGGCAATGAAAGAAGGTGAA...AATAACACCGAAGGGACTATTGTCAAAAGTCAGCTGCTTCCATTCAAATGCTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
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| CDS-3UTR CCA 90 bp | TGGAACGTTTGCAGTAGGGAAGTTTTAGCAGCATACACAGATACTAAGATGGAAAAGTCAATTCCCCATTaGGTATGCTTATCTAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WNVCSREVLAAYTDTKMEKSIPH*VCLSKL Trigger: CAGCTTAGATAAGCATACCCAATGGGGAATTGACTT...TTCCATCTTAGTATCTGTGTATGCTGCTAAAACTTCCCTACTGCAAACGTTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
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| CDS-3UTR TCA 90 bp | ATACTTCAGGTTCACAGACTATGTCTTCATGTCAAAACTGGAACGTTTGCAGTACATCCTTCATTTTGTTaGGTGCTTCTTTTTGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ILQVHRLCLHVKTGTFAVHPSFC*VLLFGL Trigger: CAGACCAAAAAGAAGCACTCAACAAAATGAAGGATG...TACTGCAAACGTTCCAGTTTTGACATGAAGACATAGTCTGTGAACCTGAAGTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
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| CDS-3UTR GCA 90 bp | TTTGAATGGAAGCAGCTGACTTTTGACAATAGTCCCTTCGGTGTTATTATGCCACTTCATTTTGTTGAGTaGTTCTTTTTGGTCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FEWKQLTFDNSPFGVIMPLHFVE*FFLVCF Trigger: GAAGCAGACCAAAAAGAAGCACTCAACAAAATGAAG...TGGCATAATAACACCGAAGGGACTATTGTCAAAAGTCAGCTGCTTCCATTCAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
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| CDS-3UTR GCA 90 bp | TGGAACGTTTGCAGTAGGGAAGTTTTAGCAGCATACACAGATACTAAGATGGAATTCACCTTCTTTCATTaGCAGAGTACCTTCATTATG | + |
|
Preference number: 4 (lower is better) Translates to: WNVCSREVLAAYTDTKMEFTFFH*QSTFIM Trigger: CATAATGAAGGTACTCTGGCAATGAAAGAAGGTGAA...TTCCATCTTAGTATCTGTGTATGCTGCTAAAACTTCCCTACTGCAAACGTTCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
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| CDS-3UTR CCA 90 bp | AGTTGGCTACTAAACACACCAGAGAACTCTGAAACACAAGATGATCAAAGGCCATCCGTTTTCAGATCATaGGCATATCTCATTAATTCA | + |
|
Preference number: 4 (lower is better) Translates to: SWLLNTPENSETQDDQRPSVFRS*AYLINS Trigger: TGAATTAATGAGATATGCCCATGATCTGAAAACGGA...TGGCCTTTGATCATCTTGTGTTTCAGAGTTCTCTGGTGTGTTTAGTAGCCAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
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| CDS-3UTR CCA 90 bp | ATACTTCAGGTTCACAGACTATGTCTTCATGTCAAAACTGGAACGTTTGCAGTATTTCAACATCTGCCTTaGTGGCATTGGTGTCATTAT | + |
|
Preference number: 4 (lower is better) Translates to: ILQVHRLCLHVKTGTFAVFQHLP*WHWCHY Trigger: ATAATGACACCAATGCCACCAAGGCAGATGTTGAAA...TACTGCAAACGTTCCAGTTTTGACATGAAGACATAGTCTGTGAACCTGAAGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR GCA 90 bp | TGGAACGTTTGCAGTAGGGAAGTTTTAGCAGCATACACAGATACTAAGATGGAATCTCCATTAAAATTTTaGAGCTGTGCAGCATATTCA | + |
|
Preference number: 4 (lower is better) Translates to: WNVCSREVLAAYTDTKMESPLKF*SCAAYS Trigger: TGAATATGCTGCACAGCTGCAAAATTTTAATGGAGA...TTCCATCTTAGTATCTGTGTATGCTGCTAAAACTTCCCTACTGCAAACGTTCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
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| CDS-3UTR GCA 90 bp | ATACTTCAGGTTCACAGACTATGTCTTCATGTCAAAACTGGAACGTTTGCAGTACTTCATTTTGTTGAGTaGTTCTTTTTGGTCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ILQVHRLCLHVKTGTFAVLHFVE*FFLVCF Trigger: GAAGCAGACCAAAAAGAAGCACTCAACAAAATGAAG...TACTGCAAACGTTCCAGTTTTGACATGAAGACATAGTCTGTGAACCTGAAGTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
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| CDS-3UTR GCA 90 bp | ATACTTCAGGTTCACAGACTATGTCTTCATGTCAAAACTGGAACGTTTGCAGTATCTCCATTAAAATTTTaGAGCTGTGCAGCATATTCA | + |
|
Preference number: 4 (lower is better) Translates to: ILQVHRLCLHVKTGTFAVSPLKF*SCAAYS Trigger: TGAATATGCTGCACAGCTGCAAAATTTTAATGGAGA...TACTGCAAACGTTCCAGTTTTGACATGAAGACATAGTCTGTGAACCTGAAGTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CAA 90 bp | CGCGAGACATGCAACAGGGTGTTAAGCAAGCGCAGGGGTGGTGCAGGCGGACAGAGCCACAGCTTGCCCTaGGCCTTCCCCACTGTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: RETCNRVLSKRRGGAGGQSHSLP*AFPTVD Trigger: GTCCACAGTGGGGAAGGCCAAGGGCAAGCTGTGGCT...CTGTCCGCCTGCACCACCCCTGCGCTTGCTTAACACCCTGTTGCATGTCTCGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CAA 90 bp | CGCGAGACATGCAACAGGGTGTTAAGCAAGCGCAGGGGTGGTGCAGGCGGACAGCCAAAGAGCCACAGCTaGCCCTTGGCCTTCCCCACT | + |
|
Preference number: 5 (lower is better) Translates to: RETCNRVLSKRRGGAGGQPKSHS*PLAFPT Trigger: AGTGGGGAAGGCCAAGGGCAAGCTGTGGCTCTTTGG...CTGTCCGCCTGCACCACCCCTGCGCTTGCTTAACACCCTGTTGCATGTCTCGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CAA 90 bp | CGCGAGACATGCAACAGGGTGTTAAGCAAGCGCAGGGGTGGTGCAGGCGGACAGGTGGGGACTGTGGCTTaGGCTTCTTTCCAAAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: RETCNRVLSKRRGGAGGQVGTVA*ASFQRA Trigger: GGCTCTTTGGAAAGAAGCCAAAGCCACAGTCCCCAC...CTGTCCGCCTGCACCACCCCTGCGCTTGCTTAACACCCTGTTGCATGTCTCGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CAA 90 bp | CGCGAGACATGCAACAGGGTGTTAAGCAAGCGCAGGGGTGGTGCAGGCGGACAGCTTGGCTCTTCATCTTaGGAGGAGCGTTTGGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: RETCNRVLSKRRGGAGGQLGSSS*EERLGQ Trigger: CTGTCCCAAACGCTCCTCCAAAGATGAAGAGCCAAG...CTGTCCGCCTGCACCACCCCTGCGCTTGCTTAACACCCTGTTGCATGTCTCGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR CAA 90 bp | TCTCCTCTAAGAACACGCCTGCCACACTTTCTTCCTCCACTCCAGACTGTCCCTAGCCACAGCTTGCCCTaGGCCTTCCCCACTGTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: SPLRTRLPHFLPPLQTVPSHSLP*AFPTVD Trigger: GTCCACAGTGGGGAAGGCCAAGGGCAAGCTGTGGCT...AGGGACAGTCTGGAGTGGAGGAAGAAAGTGTGGCAGGCGTGTTCTTAGAGGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS CCA 90 bp | GTGCTGGGCCCTTTGGCTTCTTTCCAAAGAGCCACAGCTTGCCCTTaGCCTTCCCCACTGTGGACTTGGAATCCATCTTGCCACTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: VLGPLASFQRATACP*PSPLWTWNPSCHSP Trigger: AGGAGAGTGGCAAGATGGATTCCAAGTCCACAGTGGGGAAGGCCAAGGGCAAGCTGTGGCTCTTTGGAAAGAAGCCAAAGGGCCCAGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162409.8 |
||
| CDS CCA 90 bp | GGGACTGTGGCTTTGGCTTCTTTCCAAAGAGCCACAGCTTGCCCTTaGCCTTCCCCACTGTGGACTTGGAATCCATCTTGCCACTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: GTVALASFQRATACP*PSPLWTWNPSCHSP Trigger: AGGAGAGTGGCAAGATGGATTCCAAGTCCACAGTGGGGAAGGCCAAGGGCAAGCTGTGGCTCTTTGGAAAGAAGCCAAAGCCACAGTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CAA 90 bp | CAGGGTGTTAAGCAAGCGCAGGGGTGGTGCAGGCGGACAGTGACAAATGGTGACTCTGCCTTGGTGGCATaGGTGTCATTATCCAACCTC | + |
|
Preference number: 5 (lower is better) Translates to: QGVKQAQGWCRRTVTNGDSALVA*VSLSNL Trigger: GAGGTTGGATAATGACACCAATGCCACCAAGGCAGA...GTCACCATTTGTCACTGTCCGCCTGCACCACCCCTGCGCTTGCTTAACACCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CAA 90 bp | CAGGGTGTTAAGCAAGCGCAGGGGTGGTGCAGGCGGACAGTGACAAATGGTGACTCTTTGGAGGAGCGTTaGGGACAGTACTTCTTAACC | + |
|
Preference number: 5 (lower is better) Translates to: QGVKQAQGWCRRTVTNGDSLEER*GQYFLT Trigger: GGTTAAGAAGTACTGTCCCAAACGCTCCTCCAAAGA...GTCACCATTTGTCACTGTCCGCCTGCACCACCCCTGCGCTTGCTTAACACCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR CAA 90 bp | CGCGAGACATGCAACAGGGTGTTAAGCAAGCGCAGGGGTGGTGCAGGCGGACAGCACGAACTTCTTGGTTaGCATCATCAGTGTAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: RETCNRVLSKRRGGAGGQHELLG*HHQCNF Trigger: GAAGTTACACTGATGATGCAAACCAAGAAGTTCGTG...CTGTCCGCCTGCACCACCCCTGCGCTTGCTTAACACCCTGTTGCATGTCTCGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS GCA 90 bp | ACTGTGGTGGCCATGTTGTTGGGGTGGCCCACGAACTTCTTGGTTTaGATCATCAGTGTAACTTCCCTCAGGGCTTTCTCGTCCCTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: TVVAMLLGWPTNFLV*IISVTSLRAFSSLC Trigger: ACACAGGGACGAGAAAGCCCTGAGGGAAGTTACACTGATGATGCAAACCAAGAAGTTCGTGGGCCACCCCAACAACATGGCCACCACAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
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| CDS-3UTR CAA 90 bp | TCTCCTCTAAGAACACGCCTGCCACACTTTCTTCCTCCACTCCAGACTGTCCCTCTTGGCTCTTCATCTTaGGAGGAGCGTTTGGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: SPLRTRLPHFLPPLQTVPLGSSS*EERLGQ Trigger: CTGTCCCAAACGCTCCTCCAAAGATGAAGAGCCAAG...AGGGACAGTCTGGAGTGGAGGAAGAAAGTGTGGCAGGCGTGTTCTTAGAGGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR CAA 90 bp | CAGGGTGTTAAGCAAGCGCAGGGGTGGTGCAGGCGGACAGTGACAAATGGTGACAGCCATGCCTCATTCTaGTGGATTTCCATTCGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: QGVKQAQGWCRRTVTNGDSHASF*WISIRK Trigger: CTTACGAATGGAAATCCACAAGAATGAGGCATGGCT...GTCACCATTTGTCACTGTCCGCCTGCACCACCCCTGCGCTTGCTTAACACCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CAA 90 bp | CGCGAGACATGCAACAGGGTGTTAAGCAAGCGCAGGGGTGGTGCAGGCGGACAGCTTCACCTTCTTTCATaGCCAGAGTACCTTCATTAT | + |
|
Preference number: 5 (lower is better) Translates to: RETCNRVLSKRRGGAGGQLHLLS*PEYLHY Trigger: ATAATGAAGGTACTCTGGCAATGAAAGAAGGTGAAG...CTGTCCGCCTGCACCACCCCTGCGCTTGCTTAACACCCTGTTGCATGTCTCGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CAA 90 bp | CAGGGTGTTAAGCAAGCGCAGGGGTGGTGCAGGCGGACAGTGACAAATGGTGACGTCCATCCATCACCTTaGTCCTCCTCAATAATGTAC | + |
|
Preference number: 5 (lower is better) Translates to: QGVKQAQGWCRRTVTNGDVHPSP*SSSIMY Trigger: GTACATTATTGAGGAGGACAAAGGTGATGGATGGAC...GTCACCATTTGTCACTGTCCGCCTGCACCACCCCTGCGCTTGCTTAACACCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
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| CDS TCA 90 bp | TGCGCTGCTGTAACTTCTTCCGCCTCTGCTCTGGTGGCAAATGACTaGAATCTTCTAGTGCTGGGCCCATCTTCATCGACCACCCTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: CAAVTSSASALVAND*NLLVLGPSSSTTLF Trigger: AAAGAGGGTGGTCGATGAAGATGGGCCCAGCACTAGAAGATTTCAGTCATTTGCCACCAGAGCAGAGGCGGAAGAAGTTACAGCAGCGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000162947.3 ENSMUST00000197259.5 |
||
| CDS TCA 90 bp | TCAATGCGCTGCTGTAACTTCTTCCGCCTCTGCTCTGGTGGCAAATaGCTGAAATCTTCTAGTGCTGGGCCCATCTTCATCGACCACCCT | + |
|
Preference number: 5 (lower is better) Translates to: SMRCCNFFRLCSGGK*LKSSSAGPIFIDHP Trigger: AGGGTGGTCGATGAAGATGGGCCCAGCACTAGAAGATTTCAGTCATTTGCCACCAGAGCAGAGGCGGAAGAAGTTACAGCAGCGCATTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000162947.3 ENSMUST00000197259.5 |
||
| CDS TCA 90 bp | TGCGCTGCTGTAACTTCTTCCGCCTCTGCTCTGGTGGCAAATGACTaGAATCTTCTAGTGCTGGGCCCTTTGGCTTCTTTCCAAAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: CAAVTSSASALVAND*NLLVLGPLASFQRA Trigger: GGCTCTTTGGAAAGAAGCCAAAGGGCCCAGCACTAGAAGATTTCAGTCATTTGCCACCAGAGCAGAGGCGGAAGAAGTTACAGCAGCGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162409.8 |
||
| CDS TCA 90 bp | TCAATGCGCTGCTGTAACTTCTTCCGCCTCTGCTCTGGTGGCAAATaGCTGAAATCTTCTAGTGCTGGGCCCCCTCTTTTGAGGCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SMRCCNFFRLCSGGK*LKSSSAGPPLLRLL Trigger: CAGAAGCCTCAAAAGAGGGGGCCCAGCACTAGAAGATTTCAGTCATTTGCCACCAGAGCAGAGGCGGAAGAAGTTACAGCAGCGCATTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000239148.2 |
||
| CDS CCA 90 bp | GCAGGCAGGGGATCATCATCTTCGAACTCATCATCAAACTCACTGTaGTGGCCATGTTGTTGGGGTGGCCCACGAACTTCTTGGTTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: AGRGSSSSNSSSNSL*WPCCWGGPRTSWFA Trigger: TGCAAACCAAGAAGTTCGTGGGCCACCCCAACAACATGGCCACCACAGTGAGTTTGATGATGAGTTCGAAGATGATGATCCCCTGCCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CAA 90 bp | CGCGAGACATGCAACAGGGTGTTAAGCAAGCGCAGGGGTGGTGCAGGCGGACAGACATCCTTCATTTTGTaGAGTGCTTCTTTTTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: RETCNRVLSKRRGGAGGQTSFIL*SASFWS Trigger: AGACCAAAAAGAAGCACTCAACAAAATGAAGGATGT...CTGTCCGCCTGCACCACCCCTGCGCTTGCTTAACACCCTGTTGCATGTCTCGCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
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| CDS-3UTR CAA 90 bp | CAGGGTGTTAAGCAAGCGCAGGGGTGGTGCAGGCGGACAGTGACAAATGGTGACCACGAACTTCTTGGTTaGCATCATCAGTGTAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: QGVKQAQGWCRRTVTNGDHELLG*HHQCNF Trigger: GAAGTTACACTGATGATGCAAACCAAGAAGTTCGTG...GTCACCATTTGTCACTGTCCGCCTGCACCACCCCTGCGCTTGCTTAACACCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
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| CDS GCA 90 bp | CCCCACTGTGGACTTGGAATCCATCTTGCCACTCTCCTGTTTGGCTaGACTGATGGTCCCGTCAGAAATGGTTCTGTAAATGTGCTGACT | + |
|
Preference number: 5 (lower is better) Translates to: PHCGLGIHLATLLFG*TDGPVRNGSVNVLT Trigger: AGTCAGCACATTTACAGAACCATTTCTGACGGGACCATCAGTGCAGCCAAACAGGAGAGTGGCAAGATGGATTCCAAGTCCACAGTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
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| CDS CCA 90 bp | GGCAGGGGATCATCATCTTCGAACTCATCATCAAACTCACTGTGGTaGCCATGTTGTTGGGGTGGCCCACGAACTTCTTGGTTTGCATCA | + |
|
Preference number: 5 (lower is better) Translates to: GRGSSSSNSSSNSLW*PCCWGGPRTSWFAS Trigger: TGATGCAAACCAAGAAGTTCGTGGGCCACCCCAACAACATGGCCACCACAGTGAGTTTGATGATGAGTTCGAAGATGATGATCCCCTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
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| CDS-3UTR CAA 90 bp | TATAAGGCAGAAAAAGCACACATCCTTTACACACACTTAGGCAGGACAGAAAGCAGCCACAGCTTGCCCTaGGCCTTCCCCACTGTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: YKAEKAHILYTHLGRTESSHSLP*AFPTVD Trigger: GTCCACAGTGGGGAAGGCCAAGGGCAAGCTGTGGCT...GCTTTCTGTCCTGCCTAAGTGTGTGTAAAGGATGTGTGCTTTTTCTGCCTTATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR CAA 90 bp | GATGACGACAGTCCTAACGGACAGCCCAAAATAAGACAAACTTTAAGACAGCTCACTGTGGTGGCCATGTaGTTGGGGTGGCCCACGAAC | + |
|
Preference number: 5 (lower is better) Translates to: DDDSPNGQPKIRQTLRQLTVVAM*LGWPTN Trigger: GTTCGTGGGCCACCCCAACAACATGGCCACCACAGT...GAGCTGTCTTAAAGTTTGTCTTATTTTGGGCTGTCCGTTAGGACTGTCGTCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
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| CDS TCA 90 bp | TCAATGCGCTGCTGTAACTTCTTCCGCCTCTGCTCTGGTGGCAAATaGCTGAAATCTTCTAGTGCTGGGCCCTTTGGCTTCTTTCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: SMRCCNFFRLCSGGK*LKSSSAGPFGFFPK Trigger: CTTTGGAAAGAAGCCAAAGGGCCCAGCACTAGAAGATTTCAGTCATTTGCCACCAGAGCAGAGGCGGAAGAAGTTACAGCAGCGCATTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162409.8 |
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| CDS-3UTR CAA 90 bp | TGGAACGTTTGCAGTAGGGAAGTTTTAGCAGCATACACAGATACTAAGATGGAAAGCCACAGCTTGCCCTaGGCCTTCCCCACTGTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: WNVCSREVLAAYTDTKMESHSLP*AFPTVD Trigger: GTCCACAGTGGGGAAGGCCAAGGGCAAGCTGTGGCT...TTCCATCTTAGTATCTGTGTATGCTGCTAAAACTTCCCTACTGCAAACGTTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
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| CDS-3UTR CAA 90 bp | TCTCCTCTAAGAACACGCCTGCCACACTTTCTTCCTCCACTCCAGACTGTCCCTAGCCATGCCTCATTCTaGTGGATTTCCATTCGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: SPLRTRLPHFLPPLQTVPSHASF*WISIRK Trigger: CTTACGAATGGAAATCCACAAGAATGAGGCATGGCT...AGGGACAGTCTGGAGTGGAGGAAGAAAGTGTGGCAGGCGTGTTCTTAGAGGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
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| CDS-3UTR CAA 90 bp | TCTCCTCTAAGAACACGCCTGCCACACTTTCTTCCTCCACTCCAGACTGTCCCTCCTCTTATACCTGTTTaGCCTTCAACTTCAGAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SPLRTRLPHFLPPLQTVPPLIPV*PSTSES Trigger: GCTCTCTGAAGTTGAAGGCAAAACAGGTATAAGAGG...AGGGACAGTCTGGAGTGGAGGAAGAAAGTGTGGCAGGCGTGTTCTTAGAGGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
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| CDS-3UTR CAA 90 bp | AGTTGGCTACTAAACACACCAGAGAACTCTGAAACACAAGATGATCAAAGGCCAACTGTGGTGGCCATGTaGTTGGGGTGGCCCACGAAC | + |
|
Preference number: 5 (lower is better) Translates to: SWLLNTPENSETQDDQRPTVVAM*LGWPTN Trigger: GTTCGTGGGCCACCCCAACAACATGGCCACCACAGT...TGGCCTTTGATCATCTTGTGTTTCAGAGTTCTCTGGTGTGTTTAGTAGCCAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
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| CDS-3UTR CAA 90 bp | TATAAGGCAGAAAAAGCACACATCCTTTACACACACTTAGGCAGGACAGAAAGCACTGTGGTGGCCATGTaGTTGGGGTGGCCCACGAAC | + |
|
Preference number: 5 (lower is better) Translates to: YKAEKAHILYTHLGRTESTVVAM*LGWPTN Trigger: GTTCGTGGGCCACCCCAACAACATGGCCACCACAGT...GCTTTCTGTCCTGCCTAAGTGTGTGTAAAGGATGTGTGCTTTTTCTGCCTTATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
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| CDS CCA 90 bp | TTCGAACTCATCATCAAACTCACTGTGGTGGCCATGTTGTTGGGGTaGCCCACGAACTTCTTGGTTTGCATCATCAGTGTAACTTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: FELIIKLTVVAMLLG*PTNFLVCIISVTSL Trigger: GAGGGAAGTTACACTGATGATGCAAACCAAGAAGTTCGTGGGCCACCCCAACAACATGGCCACCACAGTGAGTTTGATGATGAGTTCGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
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| CDS-3UTR CAA 90 bp | TATAAGGCAGAAAAAGCACACATCCTTTACACACACTTAGGCAGGACAGAAAGCTTGCCACTCTCCTGTTaGGCTGCACTGATGGTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: YKAEKAHILYTHLGRTESLPLSC*AALMVP Trigger: CGGGACCATCAGTGCAGCCAAACAGGAGAGTGGCAA...GCTTTCTGTCCTGCCTAAGTGTGTGTAAAGGATGTGTGCTTTTTCTGCCTTATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
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| CDS-3UTR CAA 90 bp | AGTTGGCTACTAAACACACCAGAGAACTCTGAAACACAAGATGATCAAAGGCCATTGCCACTCTCCTGTTaGGCTGCACTGATGGTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: SWLLNTPENSETQDDQRPLPLSC*AALMVP Trigger: CGGGACCATCAGTGCAGCCAAACAGGAGAGTGGCAA...TGGCCTTTGATCATCTTGTGTTTCAGAGTTCTCTGGTGTGTTTAGTAGCCAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
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| CDS-3UTR CAA 90 bp | GCAGCATTTGAATGGAAGCAGCTGACTTTTGACAATAGTCCCTTCGGTGTTATTTTGCCACTCTCCTGTTaGGCTGCACTGATGGTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: AAFEWKQLTFDNSPFGVILPLSC*AALMVP Trigger: CGGGACCATCAGTGCAGCCAAACAGGAGAGTGGCAA...AATAACACCGAAGGGACTATTGTCAAAAGTCAGCTGCTTCCATTCAAATGCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
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| CDS-3UTR CAA 90 bp | TGGAACGTTTGCAGTAGGGAAGTTTTAGCAGCATACACAGATACTAAGATGGAACCAAAGAGCCACAGCTaGCCCTTGGCCTTCCCCACT | + |
|
Preference number: 5 (lower is better) Translates to: WNVCSREVLAAYTDTKMEPKSHS*PLAFPT Trigger: AGTGGGGAAGGCCAAGGGCAAGCTGTGGCTCTTTGG...TTCCATCTTAGTATCTGTGTATGCTGCTAAAACTTCCCTACTGCAAACGTTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
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| CDS-3UTR CAA 90 bp | GATGACGACAGTCCTAACGGACAGCCCAAAATAAGACAAACTTTAAGACAGCTCGTGGGGACTGTGGCTTaGGCTTCTTTCCAAAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: DDDSPNGQPKIRQTLRQLVGTVA*ASFQRA Trigger: GGCTCTTTGGAAAGAAGCCAAAGCCACAGTCCCCAC...GAGCTGTCTTAAAGTTTGTCTTATTTTGGGCTGTCCGTTAGGACTGTCGTCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
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| CDS TCA 90 bp | CTGTGGACTTGGAATCCATCTTGCCACTCTCCTGTTTGGCTGCACTaGTGGTCCCGTCAGAAATGGTTCTGTAAATGTGCTGACTGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: LWTWNPSCHSPVWLH*WSRQKWFCKCADCN Trigger: ATTACAGTCAGCACATTTACAGAACCATTTCTGACGGGACCATCAGTGCAGCCAAACAGGAGAGTGGCAAGATGGATTCCAAGTCCACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
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| CDS-3UTR CAA 90 bp | GAGAACTCTGAAACACAAGATGATCAAAGGCCAGTGTTACTGCCTCCTCCCTTTTCTGCCTTGGTGGCATaGGTGTCATTATCCAACCTC | + |
|
Preference number: 5 (lower is better) Translates to: ENSETQDDQRPVLLPPPFSALVA*VSLSNL Trigger: GAGGTTGGATAATGACACCAATGCCACCAAGGCAGA...AAAGGGAGGAGGCAGTAACACTGGCCTTTGATCATCTTGTGTTTCAGAGTTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR CAA 90 bp | GATGACGACAGTCCTAACGGACAGCCCAAAATAAGACAAACTTTAAGACAGCTCTTCCCCACTGTGGACTaGGAATCCATCTTGCCACTC | + |
|
Preference number: 5 (lower is better) Translates to: DDDSPNGQPKIRQTLRQLFPTVD*ESILPL Trigger: GAGTGGCAAGATGGATTCCAAGTCCACAGTGGGGAA...GAGCTGTCTTAAAGTTTGTCTTATTTTGGGCTGTCCGTTAGGACTGTCGTCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
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| CDS-3UTR CAA 90 bp | ATACTTCAGGTTCACAGACTATGTCTTCATGTCAAAACTGGAACGTTTGCAGTACCAAAGAGCCACAGCTaGCCCTTGGCCTTCCCCACT | + |
|
Preference number: 5 (lower is better) Translates to: ILQVHRLCLHVKTGTFAVPKSHS*PLAFPT Trigger: AGTGGGGAAGGCCAAGGGCAAGCTGTGGCTCTTTGG...TACTGCAAACGTTCCAGTTTTGACATGAAGACATAGTCTGTGAACCTGAAGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CAA 90 bp | AGTTGGCTACTAAACACACCAGAGAACTCTGAAACACAAGATGATCAAAGGCCAGTGGGGACTGTGGCTTaGGCTTCTTTCCAAAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SWLLNTPENSETQDDQRPVGTVA*ASFQRA Trigger: GGCTCTTTGGAAAGAAGCCAAAGCCACAGTCCCCAC...TGGCCTTTGATCATCTTGTGTTTCAGAGTTCTCTGGTGTGTTTAGTAGCCAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR CAA 90 bp | ATACTTCAGGTTCACAGACTATGTCTTCATGTCAAAACTGGAACGTTTGCAGTAACTGTGGTGGCCATGTaGTTGGGGTGGCCCACGAAC | + |
|
Preference number: 5 (lower is better) Translates to: ILQVHRLCLHVKTGTFAVTVVAM*LGWPTN Trigger: GTTCGTGGGCCACCCCAACAACATGGCCACCACAGT...TACTGCAAACGTTCCAGTTTTGACATGAAGACATAGTCTGTGAACCTGAAGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CAA 90 bp | AGTTGGCTACTAAACACACCAGAGAACTCTGAAACACAAGATGATCAAAGGCCAGCTGGGCCCCCTCTTTaGAGGCTTCTGAAAGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SWLLNTPENSETQDDQRPAGPPL*RLLKEG Trigger: TCCTTCTTTCAGAAGCCTCAAAAGAGGGGGCCCAGC...TGGCCTTTGATCATCTTGTGTTTCAGAGTTCTCTGGTGTGTTTAGTAGCCAACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000239148.2 |
||
| CDS-3UTR CAA 90 bp | TCTCCTCTAAGAACACGCCTGCCACACTTTCTTCCTCCACTCCAGACTGTCCCTAACCAGATTTCTCAATaGTTTCGCATAGTTCTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SPLRTRLPHFLPPLQTVPNQISQ*FRIVLF Trigger: GAACAGAACTATGCGAAACAATTGAGAAATCTGGTT...AGGGACAGTCTGGAGTGGAGGAAGAAAGTGTGGCAGGCGTGTTCTTAGAGGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR CAA 90 bp | GATGACGACAGTCCTAACGGACAGCCCAAAATAAGACAAACTTTAAGACAGCTCTCTGCCTTGGTGGCATaGGTGTCATTATCCAACCTC | + |
|
Preference number: 5 (lower is better) Translates to: DDDSPNGQPKIRQTLRQLSALVA*VSLSNL Trigger: GAGGTTGGATAATGACACCAATGCCACCAAGGCAGA...GAGCTGTCTTAAAGTTTGTCTTATTTTGGGCTGTCCGTTAGGACTGTCGTCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CAA 90 bp | ATACTTCAGGTTCACAGACTATGTCTTCATGTCAAAACTGGAACGTTTGCAGTATTGCCACTCTCCTGTTaGGCTGCACTGATGGTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: ILQVHRLCLHVKTGTFAVLPLSC*AALMVP Trigger: CGGGACCATCAGTGCAGCCAAACAGGAGAGTGGCAA...TACTGCAAACGTTCCAGTTTTGACATGAAGACATAGTCTGTGAACCTGAAGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CAA 90 bp | TATAAGGCAGAAAAAGCACACATCCTTTACACACACTTAGGCAGGACAGAAAGCTTCCCCACTGTGGACTaGGAATCCATCTTGCCACTC | + |
|
Preference number: 5 (lower is better) Translates to: YKAEKAHILYTHLGRTESFPTVD*ESILPL Trigger: GAGTGGCAAGATGGATTCCAAGTCCACAGTGGGGAA...GCTTTCTGTCCTGCCTAAGTGTGTGTAAAGGATGTGTGCTTTTTCTGCCTTATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR CAA 90 bp | GAGAACTCTGAAACACAAGATGATCAAAGGCCAGTGTTACTGCCTCCTCCCTTTATCGACCACCCTCTTTaGAGGCTTCTGAAAGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: ENSETQDDQRPVLLPPPFIDHPL*RLLKEG Trigger: TCCTTCTTTCAGAAGCCTCAAAAGAGGGTGGTCGAT...AAAGGGAGGAGGCAGTAACACTGGCCTTTGATCATCTTGTGTTTCAGAGTTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162947.3 |
||
| CDS-3UTR CAA 90 bp | TTGACAATAGTCCCTTCGGTGTTATTATGCCAGGCCTTCAGTGCTGACCAGATTTGGCCCACGAACTTCTaGGTTTGCATCATCAGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: LTIVPSVLLCQAFSADQIWPTNF*VCIISV Trigger: TACACTGATGATGCAAACCAAGAAGTTCGTGGGCCA...AATCTGGTCAGCACTGAAGGCCTGGCATAATAACACCGAAGGGACTATTGTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CAA 90 bp | TGGAAGCAGCTGACTTTTGACAATAGTCCCTTCGGTGTTATTATGCCAGGCCTTTGGCCCACGAACTTCTaGGTTTGCATCATCAGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: WKQLTFDNSPFGVIMPGLWPTNF*VCIISV Trigger: TACACTGATGATGCAAACCAAGAAGTTCGTGGGCCA...AAGGCCTGGCATAATAACACCGAAGGGACTATTGTCAAAAGTCAGCTGCTTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CAA 90 bp | TGGAACGTTTGCAGTAGGGAAGTTTTAGCAGCATACACAGATACTAAGATGGAACTAGTGCTGGGCCCTTaGGCTTCTTTCCAAAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: WNVCSREVLAAYTDTKMELVLGP*ASFQRA Trigger: GGCTCTTTGGAAAGAAGCCAAAGGGCCCAGCACTAG...TTCCATCTTAGTATCTGTGTATGCTGCTAAAACTTCCCTACTGCAAACGTTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162409.8 |
||
| CDS-3UTR CAA 90 bp | AGTTGGCTACTAAACACACCAGAGAACTCTGAAACACAAGATGATCAAAGGCCATCTGCCTTGGTGGCATaGGTGTCATTATCCAACCTC | + |
|
Preference number: 5 (lower is better) Translates to: SWLLNTPENSETQDDQRPSALVA*VSLSNL Trigger: GAGGTTGGATAATGACACCAATGCCACCAAGGCAGA...TGGCCTTTGATCATCTTGTGTTTCAGAGTTCTCTGGTGTGTTTAGTAGCCAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR CAA 90 bp | GATGACGACAGTCCTAACGGACAGCCCAAAATAAGACAAACTTTAAGACAGCTCTGGCCCACGAACTTCTaGGTTTGCATCATCAGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: DDDSPNGQPKIRQTLRQLWPTNF*VCIISV Trigger: TACACTGATGATGCAAACCAAGAAGTTCGTGGGCCA...GAGCTGTCTTAAAGTTTGTCTTATTTTGGGCTGTCCGTTAGGACTGTCGTCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CAA 90 bp | TGGAAGCAGCTGACTTTTGACAATAGTCCCTTCGGTGTTATTATGCCAGGCCTTGTCCATCCATCACCTTaGTCCTCCTCAATAATGTAC | + |
|
Preference number: 5 (lower is better) Translates to: WKQLTFDNSPFGVIMPGLVHPSP*SSSIMY Trigger: GTACATTATTGAGGAGGACAAAGGTGATGGATGGAC...AAGGCCTGGCATAATAACACCGAAGGGACTATTGTCAAAAGTCAGCTGCTTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CAA 90 bp | AGTTGGCTACTAAACACACCAGAGAACTCTGAAACACAAGATGATCAAAGGCCATCTTTGGAGGAGCGTTaGGGACAGTACTTCTTAACC | + |
|
Preference number: 5 (lower is better) Translates to: SWLLNTPENSETQDDQRPSLEER*GQYFLT Trigger: GGTTAAGAAGTACTGTCCCAAACGCTCCTCCAAAGA...TGGCCTTTGATCATCTTGTGTTTCAGAGTTCTCTGGTGTGTTTAGTAGCCAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR CAA 90 bp | ATACTTCAGGTTCACAGACTATGTCTTCATGTCAAAACTGGAACGTTTGCAGTACTTGGCTCTTCATCTTaGGAGGAGCGTTTGGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: ILQVHRLCLHVKTGTFAVLGSSS*EERLGQ Trigger: CTGTCCCAAACGCTCCTCCAAAGATGAAGAGCCAAG...TACTGCAAACGTTCCAGTTTTGACATGAAGACATAGTCTGTGAACCTGAAGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR CAA 90 bp | GAGAACTCTGAAACACAAGATGATCAAAGGCCAGTGTTACTGCCTCCTCCCTTTACACATGTCAAGGTATaGTTGAGCTTTTCGTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ENSETQDDQRPVLLPPPFTHVKV*LSFSSF Trigger: GAAGGACGAAAAGCTCAACAATACCTTGACATGTGT...AAAGGGAGGAGGCAGTAACACTGGCCTTTGATCATCTTGTGTTTCAGAGTTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR CAA 90 bp | TGGAAGCAGCTGACTTTTGACAATAGTCCCTTCGGTGTTATTATGCCAGGCCTTTTTTCAACATCTGCCTaGGTGGCATTGGTGTCATTA | + |
|
Preference number: 5 (lower is better) Translates to: WKQLTFDNSPFGVIMPGLFSTSA*VALVSL Trigger: TAATGACACCAATGCCACCAAGGCAGATGTTGAAAA...AAGGCCTGGCATAATAACACCGAAGGGACTATTGTCAAAAGTCAGCTGCTTCCA 44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CAA 90 bp | GATGACGACAGTCCTAACGGACAGCCCAAAATAAGACAAACTTTAAGACAGCTCGGTTCAAAGCCAGACTaGAAGGAGTCTACTACCATT | + |
|
Preference number: 5 (lower is better) Translates to: DDDSPNGQPKIRQTLRQLGSKPD*KESTTI Trigger: AATGGTAGTAGACTCCTTCAAGTCTGGCTTTGAACC...GAGCTGTCTTAAAGTTTGTCTTATTTTGGGCTGTCCGTTAGGACTGTCGTCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CAA 90 bp | ATACTTCAGGTTCACAGACTATGTCTTCATGTCAAAACTGGAACGTTTGCAGTATTCCCCACTGTGGACTaGGAATCCATCTTGCCACTC | + |
|
Preference number: 5 (lower is better) Translates to: ILQVHRLCLHVKTGTFAVFPTVD*ESILPL Trigger: GAGTGGCAAGATGGATTCCAAGTCCACAGTGGGGAA...TACTGCAAACGTTCCAGTTTTGACATGAAGACATAGTCTGTGAACCTGAAGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CAA 90 bp | GCAGCATTTGAATGGAAGCAGCTGACTTTTGACAATAGTCCCTTCGGTGTTATTATCGACCACCCTCTTTaGAGGCTTCTGAAAGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: AAFEWKQLTFDNSPFGVIIDHPL*RLLKEG Trigger: TCCTTCTTTCAGAAGCCTCAAAAGAGGGTGGTCGAT...AATAACACCGAAGGGACTATTGTCAAAAGTCAGCTGCTTCCATTCAAATGCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162947.3 ENSMUST00000197259.5 |
||
| CDS-3UTR CAA 90 bp | TGGAAGCAGCTGACTTTTGACAATAGTCCCTTCGGTGTTATTATGCCAGGCCTTCTTCACCTTCTTTCATaGCCAGAGTACCTTCATTAT | + |
|
Preference number: 5 (lower is better) Translates to: WKQLTFDNSPFGVIMPGLLHLLS*PEYLHY Trigger: ATAATGAAGGTACTCTGGCAATGAAAGAAGGTGAAG...AAGGCCTGGCATAATAACACCGAAGGGACTATTGTCAAAAGTCAGCTGCTTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CAA 90 bp | TTGACAATAGTCCCTTCGGTGTTATTATGCCAGGCCTTCAGTGCTGACCAGATTCTTCACCTTCTTTCATaGCCAGAGTACCTTCATTAT | + |
|
Preference number: 5 (lower is better) Translates to: LTIVPSVLLCQAFSADQILHLLS*PEYLHY Trigger: ATAATGAAGGTACTCTGGCAATGAAAGAAGGTGAAG...AATCTGGTCAGCACTGAAGGCCTGGCATAATAACACCGAAGGGACTATTGTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CAA 90 bp | TTGACAATAGTCCCTTCGGTGTTATTATGCCAGGCCTTCAGTGCTGACCAGATTAACCAGATTTCTCAATaGTTTCGCATAGTTCTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LTIVPSVLLCQAFSADQINQISQ*FRIVLF Trigger: GAACAGAACTATGCGAAACAATTGAGAAATCTGGTT...AATCTGGTCAGCACTGAAGGCCTGGCATAATAACACCGAAGGGACTATTGTCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR CAA 90 bp | TGGAAGCAGCTGACTTTTGACAATAGTCCCTTCGGTGTTATTATGCCAGGCCTTAACCAGATTTCTCAATaGTTTCGCATAGTTCTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: WKQLTFDNSPFGVIMPGLNQISQ*FRIVLF Trigger: GAACAGAACTATGCGAAACAATTGAGAAATCTGGTT...AAGGCCTGGCATAATAACACCGAAGGGACTATTGTCAAAAGTCAGCTGCTTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR CAA 90 bp | GCAGCATTTGAATGGAAGCAGCTGACTTTTGACAATAGTCCCTTCGGTGTTATTCATGTCAAGGTATTGTaGAGCTTTTCGTCCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: AAFEWKQLTFDNSPFGVIHVKVL*SFSSFL Trigger: CAAGAAGGACGAAAAGCTCAACAATACCTTGACATG...AATAACACCGAAGGGACTATTGTCAAAAGTCAGCTGCTTCCATTCAAATGCTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR CAA 90 bp | TATAAGGCAGAAAAAGCACACATCCTTTACACACACTTAGGCAGGACAGAAAGCCATGTCAAGGTATTGTaGAGCTTTTCGTCCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: YKAEKAHILYTHLGRTESHVKVL*SFSSFL Trigger: CAAGAAGGACGAAAAGCTCAACAATACCTTGACATG...GCTTTCTGTCCTGCCTAAGTGTGTGTAAAGGATGTGTGCTTTTTCTGCCTTATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR CAA 90 bp | TATAAGGCAGAAAAAGCACACATCCTTTACACACACTTAGGCAGGACAGAAAGCACACATGTCAAGGTATaGTTGAGCTTTTCGTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: YKAEKAHILYTHLGRTESTHVKV*LSFSSF Trigger: GAAGGACGAAAAGCTCAACAATACCTTGACATGTGT...GCTTTCTGTCCTGCCTAAGTGTGTGTAAAGGATGTGTGCTTTTTCTGCCTTATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR CAA 90 bp | TTGACAATAGTCCCTTCGGTGTTATTATGCCAGGCCTTCAGTGCTGACCAGATTTTCTCCATTAAAATTTaGCAGCTGTGCAGCATATTC | + |
|
Preference number: 5 (lower is better) Translates to: LTIVPSVLLCQAFSADQIFSIKI*QLCSIF Trigger: GAATATGCTGCACAGCTGCAAAATTTTAATGGAGAA...AATCTGGTCAGCACTGAAGGCCTGGCATAATAACACCGAAGGGACTATTGTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CAA 90 bp | GAGAACTCTGAAACACAAGATGATCAAAGGCCAGTGTTACTGCCTCCTCCCTTTTTCTCCATTAAAATTTaGCAGCTGTGCAGCATATTC | + |
|
Preference number: 5 (lower is better) Translates to: ENSETQDDQRPVLLPPPFFSIKI*QLCSIF Trigger: GAATATGCTGCACAGCTGCAAAATTTTAATGGAGAA...AAAGGGAGGAGGCAGTAACACTGGCCTTTGATCATCTTGTGTTTCAGAGTTCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR CAA 90 bp | TTTGAATGGAAGCAGCTGACTTTTGACAATAGTCCCTTCGGTGTTATTATGCCAGGTTCAAAGCCAGACTaGAAGGAGTCTACTACCATT | + |
|
Preference number: 5 (lower is better) Translates to: FEWKQLTFDNSPFGVIMPGSKPD*KESTTI Trigger: AATGGTAGTAGACTCCTTCAAGTCTGGCTTTGAACC...TGGCATAATAACACCGAAGGGACTATTGTCAAAAGTCAGCTGCTTCCATTCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CAA 90 bp | TTGGTAAGACCAAAAGGGGCATTCAGTTTAAAGTGTCTGTCCCAAATGTACCTAAGCCATGCCTCATTCTaGTGGATTTCCATTCGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: LVRPKGAFSLKCLSQMYLSHASF*WISIRK Trigger: CTTACGAATGGAAATCCACAAGAATGAGGCATGGCT...TAGGTACATTTGGGACAGACACTTTAAACTGAATGCCCCTTTTGGTCTTACCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR CAA 90 bp | TTGGTAAGACCAAAAGGGGCATTCAGTTTAAAGTGTCTGTCCCAAATGTACCTACCTCTTATACCTGTTTaGCCTTCAACTTCAGAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LVRPKGAFSLKCLSQMYLPLIPV*PSTSES Trigger: GCTCTCTGAAGTTGAAGGCAAAACAGGTATAAGAGG...TAGGTACATTTGGGACAGACACTTTAAACTGAATGCCCCTTTTGGTCTTACCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR CAA 90 bp | AGTTGGCTACTAAACACACCAGAGAACTCTGAAACACAAGATGATCAAAGGCCACACGAACTTCTTGGTTaGCATCATCAGTGTAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: SWLLNTPENSETQDDQRPHELLG*HHQCNF Trigger: GAAGTTACACTGATGATGCAAACCAAGAAGTTCGTG...TGGCCTTTGATCATCTTGTGTTTCAGAGTTCTCTGGTGTGTTTAGTAGCCAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR CAA 90 bp | TATAAGGCAGAAAAAGCACACATCCTTTACACACACTTAGGCAGGACAGAAAGCAGCTTTTCGTCCTTCTaGGAGATGCATTTTTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: YKAEKAHILYTHLGRTESSFSSF*EMHFSF Trigger: GAAAGAAAAATGCATCTCCAAGAAGGACGAAAAGCT...GCTTTCTGTCCTGCCTAAGTGTGTGTAAAGGATGTGTGCTTTTTCTGCCTTATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR CAA 90 bp | GCAGCATTTGAATGGAAGCAGCTGACTTTTGACAATAGTCCCTTCGGTGTTATTAGCTTTTCGTCCTTCTaGGAGATGCATTTTTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: AAFEWKQLTFDNSPFGVISFSSF*EMHFSF Trigger: GAAAGAAAAATGCATCTCCAAGAAGGACGAAAAGCT...AATAACACCGAAGGGACTATTGTCAAAAGTCAGCTGCTTCCATTCAAATGCTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR CAA 90 bp | TTGGTAAGACCAAAAGGGGCATTCAGTTTAAAGTGTCTGTCCCAAATGTACCTACATGTCAAGGTATTGTaGAGCTTTTCGTCCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LVRPKGAFSLKCLSQMYLHVKVL*SFSSFL Trigger: CAAGAAGGACGAAAAGCTCAACAATACCTTGACATG...TAGGTACATTTGGGACAGACACTTTAAACTGAATGCCCCTTTTGGTCTTACCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR CAA 90 bp | TTTGAATGGAAGCAGCTGACTTTTGACAATAGTCCCTTCGGTGTTATTATGCCATTTTCAACATCTGCCTaGGTGGCATTGGTGTCATTA | + |
|
Preference number: 5 (lower is better) Translates to: FEWKQLTFDNSPFGVIMPFSTSA*VALVSL Trigger: TAATGACACCAATGCCACCAAGGCAGATGTTGAAAA...TGGCATAATAACACCGAAGGGACTATTGTCAAAAGTCAGCTGCTTCCATTCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CAA 90 bp | GCAGCATTTGAATGGAAGCAGCTGACTTTTGACAATAGTCCCTTCGGTGTTATTATGATAGGAATAACTTaGCGTTCTGAGTCTGCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: AAFEWKQLTFDNSPFGVIMIGIT*RSESAN Trigger: GTTTGCAGACTCAGAACGCAAAGTTATTCCTATCAT...AATAACACCGAAGGGACTATTGTCAAAAGTCAGCTGCTTCCATTCAAATGCTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CAA 90 bp | AGTTGGCTACTAAACACACCAGAGAACTCTGAAACACAAGATGATCAAAGGCCAATGATAGGAATAACTTaGCGTTCTGAGTCTGCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: SWLLNTPENSETQDDQRPMIGIT*RSESAN Trigger: GTTTGCAGACTCAGAACGCAAAGTTATTCCTATCAT...TGGCCTTTGATCATCTTGTGTTTCAGAGTTCTCTGGTGTGTTTAGTAGCCAACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR CAA 90 bp | GATGACGACAGTCCTAACGGACAGCCCAAAATAAGACAAACTTTAAGACAGCTCACATCCTTCATTTTGTaGAGTGCTTCTTTTTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: DDDSPNGQPKIRQTLRQLTSFIL*SASFWS Trigger: AGACCAAAAAGAAGCACTCAACAAAATGAAGGATGT...GAGCTGTCTTAAAGTTTGTCTTATTTTGGGCTGTCCGTTAGGACTGTCGTCATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CAA 90 bp | ATACTTCAGGTTCACAGACTATGTCTTCATGTCAAAACTGGAACGTTTGCAGTACCTCTTATACCTGTTTaGCCTTCAACTTCAGAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: ILQVHRLCLHVKTGTFAVPLIPV*PSTSES Trigger: GCTCTCTGAAGTTGAAGGCAAAACAGGTATAAGAGG...TACTGCAAACGTTCCAGTTTTGACATGAAGACATAGTCTGTGAACCTGAAGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CAA 90 bp | TGGAACGTTTGCAGTAGGGAAGTTTTAGCAGCATACACAGATACTAAGATGGAACACGAACTTCTTGGTTaGCATCATCAGTGTAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: WNVCSREVLAAYTDTKMEHELLG*HHQCNF Trigger: GAAGTTACACTGATGATGCAAACCAAGAAGTTCGTG...TTCCATCTTAGTATCTGTGTATGCTGCTAAAACTTCCCTACTGCAAACGTTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CAA 90 bp | AGTTGGCTACTAAACACACCAGAGAACTCTGAAACACAAGATGATCAAAGGCCACTTCACCTTCTTTCATaGCCAGAGTACCTTCATTAT | + |
|
Preference number: 5 (lower is better) Translates to: SWLLNTPENSETQDDQRPLHLLS*PEYLHY Trigger: ATAATGAAGGTACTCTGGCAATGAAAGAAGGTGAAG...TGGCCTTTGATCATCTTGTGTTTCAGAGTTCTCTGGTGTGTTTAGTAGCCAACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
||
| CDS-3UTR CAA 90 bp | ATACTTCAGGTTCACAGACTATGTCTTCATGTCAAAACTGGAACGTTTGCAGTAGTCCATCCATCACCTTaGTCCTCCTCAATAATGTAC | + |
|
Preference number: 5 (lower is better) Translates to: ILQVHRLCLHVKTGTFAVVHPSP*SSSIMY Trigger: GTACATTATTGAGGAGGACAAAGGTGATGGATGGAC...TACTGCAAACGTTCCAGTTTTGACATGAAGACATAGTCTGTGAACCTGAAGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
||
| CDS-3UTR CAA 90 bp | TGGAACGTTTGCAGTAGGGAAGTTTTAGCAGCATACACAGATACTAAGATGGAAAGCTTTTCGTCCTTCTaGGAGATGCATTTTTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: WNVCSREVLAAYTDTKMESFSSF*EMHFSF Trigger: GAAAGAAAAATGCATCTCCAAGAAGGACGAAAAGCT...TTCCATCTTAGTATCTGTGTATGCTGCTAAAACTTCCCTACTGCAAACGTTCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
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| CDS-3UTR CAA 90 bp | ATACTTCAGGTTCACAGACTATGTCTTCATGTCAAAACTGGAACGTTTGCAGTATTTTCAACATCTGCCTaGGTGGCATTGGTGTCATTA | + |
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Preference number: 5 (lower is better) Translates to: ILQVHRLCLHVKTGTFAVFSTSA*VALVSL Trigger: TAATGACACCAATGCCACCAAGGCAGATGTTGAAAA...TACTGCAAACGTTCCAGTTTTGACATGAAGACATAGTCTGTGAACCTGAAGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
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| CDS-3UTR CAA 90 bp | GCAGCATTTGAATGGAAGCAGCTGACTTTTGACAATAGTCCCTTCGGTGTTATTTTCTCCATTAAAATTTaGCAGCTGTGCAGCATATTC | + |
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Preference number: 5 (lower is better) Translates to: AAFEWKQLTFDNSPFGVIFSIKI*QLCSIF Trigger: GAATATGCTGCACAGCTGCAAAATTTTAATGGAGAA...AATAACACCGAAGGGACTATTGTCAAAAGTCAGCTGCTTCCATTCAAATGCTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
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| CDS-3UTR CAA 90 bp | TTTGAATGGAAGCAGCTGACTTTTGACAATAGTCCCTTCGGTGTTATTATGCCAATGATAGGAATAACTTaGCGTTCTGAGTCTGCAAAC | + |
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Preference number: 5 (lower is better) Translates to: FEWKQLTFDNSPFGVIMPMIGIT*RSESAN Trigger: GTTTGCAGACTCAGAACGCAAAGTTATTCCTATCAT...TGGCATAATAACACCGAAGGGACTATTGTCAAAAGTCAGCTGCTTCCATTCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
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| CDS-3UTR CAA 90 bp | TATAAGGCAGAAAAAGCACACATCCTTTACACACACTTAGGCAGGACAGAAAGCACATCCTTCATTTTGTaGAGTGCTTCTTTTTGGTCT | + |
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Preference number: 5 (lower is better) Translates to: YKAEKAHILYTHLGRTESTSFIL*SASFWS Trigger: AGACCAAAAAGAAGCACTCAACAAAATGAAGGATGT...GCTTTCTGTCCTGCCTAAGTGTGTGTAAAGGATGTGTGCTTTTTCTGCCTTATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
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| CDS CCA 90 bp | TTTCGTCCTTCTTGGAGATGCATTTTTCTTTCCGTTTTCAGATCATaGGCATATCTCATTAATTCACCATATACTCTGTGCGCCATTTCT | + |
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Preference number: 5 (lower is better) Translates to: FRPSWRCIFLSVFRS*AYLINSPYTLCAIS Trigger: AGAAATGGCGCACAGAGTATATGGTGAATTAATGAGATATGCCCATGATCTGAAAACGGAAAGAAAAATGCATCTCCAAGAAGGACGAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
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| CDS-3UTR CAA 90 bp | TGGAACGTTTGCAGTAGGGAAGTTTTAGCAGCATACACAGATACTAAGATGGAATTCTCCATTAAAATTTaGCAGCTGTGCAGCATATTC | + |
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Preference number: 5 (lower is better) Translates to: WNVCSREVLAAYTDTKMEFSIKI*QLCSIF Trigger: GAATATGCTGCACAGCTGCAAAATTTTAATGGAGAA...TTCCATCTTAGTATCTGTGTATGCTGCTAAAACTTCCCTACTGCAAACGTTCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
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| CDS-3UTR CAA 90 bp | ATACTTCAGGTTCACAGACTATGTCTTCATGTCAAAACTGGAACGTTTGCAGTAATGATAGGAATAACTTaGCGTTCTGAGTCTGCAAAC | + |
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Preference number: 5 (lower is better) Translates to: ILQVHRLCLHVKTGTFAVMIGIT*RSESAN Trigger: GTTTGCAGACTCAGAACGCAAAGTTATTCCTATCAT...TACTGCAAACGTTCCAGTTTTGACATGAAGACATAGTCTGTGAACCTGAAGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
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| CDS CAA 90 bp | TTTCCAAAGAGCCACAGCTTGCCCTTGGCCTTCCCCACTGTGGACTaGGAATCCATCTTGCCACTCTCCTGTTTGGCTGCACTGATGGTC | + |
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Preference number: 6 (lower is better) Translates to: FPKSHSLPLAFPTVD*ESILPLSCLAALMV Trigger: GACCATCAGTGCAGCCAAACAGGAGAGTGGCAAGATGGATTCCAAGTCCACAGTGGGGAAGGCCAAGGGCAAGCTGTGGCTCTTTGGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
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| CDS CAA 72 bp | GTGGTGGCCATGTTGTTGGGGTGGCCCACGAACTTCTaGGTTTGCATCATCAGTGTAACTTCCCTCAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: VVAMLLGWPTNF*VCIISVTSLRA Trigger: AGCCCTGAGGGAAGTTACACTGATGATGCAAACCAAGAAGTTCGTGGGCCACCCCAACAACATGGCCACCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
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| CDS GCA 72 bp | GCCATGTTGTTGGGGTGGCCCACGAACTTCTTGGTTTaGATCATCAGTGTAACTTCCCTCAGGGCTTTCTCG | + |
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Preference number: 6 (lower is better) Translates to: AMLLGWPTNFLV*IISVTSLRAFS Trigger: CGAGAAAGCCCTGAGGGAAGTTACACTGATGATGCAAACCAAGAAGTTCGTGGGCCACCCCAACAACATGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
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| CDS CAA 72 bp | GGCCATGTTGTTGGGGTGGCCCACGAACTTCTTGGTTaGCATCATCAGTGTAACTTCCCTCAGGGCTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: GHVVGVAHELLG*HHQCNFPQGFL Trigger: GAGAAAGCCCTGAGGGAAGTTACACTGATGATGCAAACCAAGAAGTTCGTGGGCCACCCCAACAACATGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
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| CDS CAA 90 bp | AAACTCACTGTGGTGGCCATGTTGTTGGGGTGGCCCACGAACTTCTaGGTTTGCATCATCAGTGTAACTTCCCTCAGGGCTTTCTCGTCC | + |
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Preference number: 6 (lower is better) Translates to: KLTVVAMLLGWPTNF*VCIISVTSLRAFSS Trigger: GGACGAGAAAGCCCTGAGGGAAGTTACACTGATGATGCAAACCAAGAAGTTCGTGGGCCACCCCAACAACATGGCCACCACAGTGAGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
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| CDS TCA 72 bp | GTAACTTCTTCCGCCTCTGCTCTGGTGGCAAATGACTaGAATCTTCTAGTGCTGGGCCCATCTTCATCGACC | + |
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Preference number: 6 (lower is better) Translates to: VTSSASALVAND*NLLVLGPSSST Trigger: GGTCGATGAAGATGGGCCCAGCACTAGAAGATTTCAGTCATTTGCCACCAGAGCAGAGGCGGAAGAAGTTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000162947.3 ENSMUST00000197259.5 |
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| CDS CAA 72 bp | ACTGTGGACTTGGAATCCATCTTGCCACTCTCCTGTTaGGCTGCACTGATGGTCCCGTCAGAAATGGTTCTG | + |
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Preference number: 6 (lower is better) Translates to: TVDLESILPLSC*AALMVPSEMVL Trigger: CAGAACCATTTCTGACGGGACCATCAGTGCAGCCAAACAGGAGAGTGGCAAGATGGATTCCAAGTCCACAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
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| CDS TCA 72 bp | GTAACTTCTTCCGCCTCTGCTCTGGTGGCAAATGACTaGAATCTTCTAGTGCTGGGCCCTTTGGCTTCTTTC | + |
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Preference number: 6 (lower is better) Translates to: VTSSASALVAND*NLLVLGPLASF Trigger: GAAAGAAGCCAAAGGGCCCAGCACTAGAAGATTTCAGTCATTTGCCACCAGAGCAGAGGCGGAAGAAGTTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162409.8 |
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| CDS CCA 72 bp | GGATCATCATCTTCGAACTCATCATCAAACTCACTGTaGTGGCCATGTTGTTGGGGTGGCCCACGAACTTCT | + |
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Preference number: 6 (lower is better) Translates to: GSSSSNSSSNSL*WPCCWGGPRTS Trigger: AGAAGTTCGTGGGCCACCCCAACAACATGGCCACCACAGTGAGTTTGATGATGAGTTCGAAGATGATGATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
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| CDS CAA 72 bp | TTCGAACTCATCATCAAACTCACTGTGGTGGCCATGTaGTTGGGGTGGCCCACGAACTTCTTGGTTTGCATC | + |
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Preference number: 6 (lower is better) Translates to: FELIIKLTVVAM*LGWPTNFLVCI Trigger: GATGCAAACCAAGAAGTTCGTGGGCCACCCCAACAACATGGCCACCACAGTGAGTTTGATGATGAGTTCGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
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| CDS GCA 72 bp | ATTTTGTTGAGTGCTTCTTTTTGGTCTGCTTCCTTCTaGAGCCCTCGGTTAAGCTCGTCAATGCGCTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: ILLSASFWSASF*SPRLSSSMRCC Trigger: ACAGCAGCGCATTGACGAGCTTAACCGAGGGCTGCAGAAGGAAGCAGACCAAAAAGAAGCACTCAACAAAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
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| CDS CCA 72 bp | ATCATCAAACTCACTGTGGTGGCCATGTTGTTGGGGTaGCCCACGAACTTCTTGGTTTGCATCATCAGTGTA | + |
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Preference number: 6 (lower is better) Translates to: IIKLTVVAMLLG*PTNFLVCIISV Trigger: TACACTGATGATGCAAACCAAGAAGTTCGTGGGCCACCCCAACAACATGGCCACCACAGTGAGTTTGATGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
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| CDS CCA 72 bp | AACTCATCATCAAACTCACTGTGGTGGCCATGTTGTTaGGGTGGCCCACGAACTTCTTGGTTTGCATCATCA | + |
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Preference number: 6 (lower is better) Translates to: NSSSNSLWWPCC*GGPRTSWFASS Trigger: TGATGATGCAAACCAAGAAGTTCGTGGGCCACCCCAACAACATGGCCACCACAGTGAGTTTGATGATGAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
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| CDS CAA 90 bp | ATCATCATCTTCGAACTCATCATCAAACTCACTGTGGTGGCCATGTaGTTGGGGTGGCCCACGAACTTCTTGGTTTGCATCATCAGTGTA | + |
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Preference number: 6 (lower is better) Translates to: IIIFELIIKLTVVAM*LGWPTNFLVCIISV Trigger: TACACTGATGATGCAAACCAAGAAGTTCGTGGGCCACCCCAACAACATGGCCACCACAGTGAGTTTGATGATGAGTTCGAAGATGATGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
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| CDS CAA 90 bp | CCTTCTTCACCGTTCTGTCTCCGAGCTCTTGTCCATCCATCACCTTaGTCCTCCTCAATAATGTACAGAACTTCACCTTCTTTCATTGCC | + |
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Preference number: 6 (lower is better) Translates to: PSSPFCLRALVHPSP*SSSIMYRTSPSFIA Trigger: GGCAATGAAAGAAGGTGAAGTTCTGTACATTATTGAGGAGGACAAAGGTGATGGATGGACAAGAGCTCGGAGACAGAACGGTGAAGAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
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| CDS CAA 72 bp | CCGTTCTGTCTCCGAGCTCTTGTCCATCCATCACCTTaGTCCTCCTCAATAATGTACAGAACTTCACCTTCT | + |
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Preference number: 6 (lower is better) Translates to: PFCLRALVHPSP*SSSIMYRTSPS Trigger: AGAAGGTGAAGTTCTGTACATTATTGAGGAGGACAAAGGTGATGGATGGACAAGAGCTCGGAGACAGAACGG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
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| CDS GCA 72 bp | CACATCCTTCATTTTGTTGAGTGCTTCTTTTTGGTCTaGTTCCTTCTGCAGCCCTCGGTTAAGCTCGTCAAT | + |
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Preference number: 6 (lower is better) Translates to: HILHFVECFFLV*FLLQPSVKLVN Trigger: ATTGACGAGCTTAACCGAGGGCTGCAGAAGGAAGCAGACCAAAAAGAAGCACTCAACAAAATGAAGGATGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
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| CDS CAA 72 bp | AAGGCGATACATGAAGTAAACCTTGGCTCTTCATCTTaGGAGGAGCGTTTGGGACAGTACTTCTTAACCAGA | + |
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Preference number: 6 (lower is better) Translates to: KAIHEVNLGSSS*EERLGQYFLTR Trigger: TCTGGTTAAGAAGTACTGTCCCAAACGCTCCTCCAAAGATGAAGAGCCAAGGTTTACTTCATGTATCGCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
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| CDS TCA 72 bp | CAAATGGAAAGTCTCCTGGAGGTTCAAAGCCAGACTTaGAGGAGTCTACTACCATTTGAGAATCTCTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: QMESLLEVQSQT*RSLLPFENLFF Trigger: AAAGAAGAGATTCTCAAATGGTAGTAGACTCCTTCAAGTCTGGCTTTGAACCTCCAGGAGACTTTCCATTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
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| CDS CAA 72 bp | GAAGTAAACCTTGGCTCTTCATCTTTGGAGGAGCGTTaGGGACAGTACTTCTTAACCAGATTTCTCAATTGT | + |
|
Preference number: 6 (lower is better) Translates to: EVNLGSSSLEER*GQYFLTRFLNC Trigger: ACAATTGAGAAATCTGGTTAAGAAGTACTGTCCCAAACGCTCCTCCAAAGATGAAGAGCCAAGGTTTACTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
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| CDS GCA 72 bp | ATTGGTGTCATTATCCAACCTCTCATAACTCTGCTGTaGTTTCTCCGCTTCTCTACATTCTCTTTCAAACTT | + |
|
Preference number: 6 (lower is better) Translates to: IGVIIQPLITLL*FLRFSTFSFKL Trigger: AAGTTTGAAAGAGAATGTAGAGAAGCGGAGAAAGCACAGCAGAGTTATGAGAGGTTGGATAATGACACCAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
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| CDS GCA 72 bp | TGTGCAGCATATTCATTTTTATTCTCATCAGCCATATaGGTACGAAGGTTCAACTGCTGTTTGGCCTTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: CAAYSFLFSSAI*VRRFNCCLAFS Trigger: TGAAAAGGCCAAACAGCAGTTGAACCTTCGTACGCATATGGCTGATGAGAATAAAAATGAATATGCTGCACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000197259.5 ENSMUST00000239148.2 |
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| CDS TCA 72 bp | TTATCCATCTGTTTCCAACACATGTCAAGGTATTGTTaGGCTTTTCGTCCTTCTTGGAGATGCATTTTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: LSICFQHMSRYC*AFRPSWRCIFL Trigger: AAGAAAAATGCATCTCCAAGAAGGACGAAAAGCTCAACAATACCTTGACATGTGTTGGAAACAGATGGATAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
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| CDS CAA 72 bp | ATTATCCATCTGTTTCCAACACATGTCAAGGTATTGTaGAGCTTTTCGTCCTTCTTGGAGATGCATTTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: IIHLFPTHVKVL*SFSSFLEMHFS Trigger: AGAAAAATGCATCTCCAAGAAGGACGAAAAGCTCAACAATACCTTGACATGTGTTGGAAACAGATGGATAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
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| CDS CAA 72 bp | ACTATTATCCATCTGTTTCCAACACATGTCAAGGTATaGTTGAGCTTTTCGTCCTTCTTGGAGATGCATTTT | + |
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Preference number: 6 (lower is better) Translates to: TIIHLFPTHVKV*LSFSSFLEMHF Trigger: AAAATGCATCTCCAAGAAGGACGAAAAGCTCAACAATACCTTGACATGTGTTGGAAACAGATGGATAATAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162409.8 ENSMUST00000162947.3 ENSMUST00000239148.2 |
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