Pregenerated sensors for FNBP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075415Ensembl transcript IDs: ENSMUST00000073879.12, ENSMUST00000075326.11, ENSMUST00000100207.9, ENSMUST00000100208.9, ENSMUST00000113552.9, ENSMUST00000113555.8, ENSMUST00000113559.10, ENSMUST00000113560.8, ENSMUST00000113562.9, ENSMUST00000113564.9, ENSMUST00000128431.3, ENSMUST00000128500.8, ENSMUST00000136181.8, ENSMUST00000149196.2
Found 620 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCAGCCTGCAGGTGGGCTGGAGGCTGCCCAGCCAGCCTGAGTGGTaGTGGAGGCCTGTGGGGACAAGCGGGCTGGACGATGATGGCTCC | + |
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Preference number: 1 (lower is better) Translates to: PSLQVGWRLPSQPEW*WRPVGTSGLDDDGS Trigger: GGAGCCATCATCGTCCAGCCCGCTTGTCCCCACAGGCCTCCAGCACCACTCAGGCTGGCTGGGCAGCCTCCAGCCCACCTGCAGGCTGGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| 3UTR CCA 90 bp | TGGGCTGGAGGCTGCCCAGCCAGCCTGAGTGGTGCTGGAGGCCTGTaGGGACAAGCGGGCTGGACGATGATGGCTCCCTCCCGGGAGGCT | + |
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Preference number: 1 (lower is better) Translates to: WAGGCPASLSGAGGL*GQAGWTMMAPSREA Trigger: AGCCTCCCGGGAGGGAGCCATCATCGTCCAGCCCGCTTGTCCCCACAGGCCTCCAGCACCACTCAGGCTGGCTGGGCAGCCTCCAGCCCA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| 3UTR CCA 90 bp | GCCCGGAAGGAGCAGGGACACAGGGCACATGCCCAGCTGTCTTGGTaGCCTGGGTGGGAAGGGAGCAGAGTAAAGTGGACAGCCCCCGTG | + |
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Preference number: 1 (lower is better) Translates to: ARKEQGHRAHAQLSW*PGWEGSRVKWTAPV Trigger: CACGGGGGCTGTCCACTTTACTCTGCTCCCTTCCCACCCAGGCCACCAAGACAGCTGGGCATGTGCCCTGTGTCCCTGCTCCTTCCGGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| 3UTR CCA 90 bp | GGAGCCCGGAAGGAGCAGGGACACAGGGCACATGCCCAGCTGTCTTaGTGGCCTGGGTGGGAAGGGAGCAGAGTAAAGTGGACAGCCCCC | + |
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Preference number: 1 (lower is better) Translates to: GARKEQGHRAHAQLS*WPGWEGSRVKWTAP Trigger: GGGGGCTGTCCACTTTACTCTGCTCCCTTCCCACCCAGGCCACCAAGACAGCTGGGCATGTGCCCTGTGTCCCTGCTCCTTCCGGGCTCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| 3UTR GCA 90 bp | AGCAGGTGGACTGGGAGCCCGGAAGGAGCAGGGACACAGGGCACATaGCCAGCTGTCTTGGTGGCCTGGGTGGGAAGGGAGCAGAGTAAA | + |
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Preference number: 1 (lower is better) Translates to: SRWTGSPEGAGTQGT*PAVLVAWVGREQSK Trigger: TTTACTCTGCTCCCTTCCCACCCAGGCCACCAAGACAGCTGGGCATGTGCCCTGTGTCCCTGCTCCTTCCGGGCTCCCAGTCCACCTGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| 3UTR CCA 90 bp | CAGTGTGAGATGTGCAAGGAGTGGCCAGGCGATGAGCAGGTGGACTaGGAGCCCGGAAGGAGCAGGGACACAGGGCACATGCCCAGCTGT | + |
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Preference number: 1 (lower is better) Translates to: QCEMCKEWPGDEQVD*EPGRSRDTGHMPSC Trigger: ACAGCTGGGCATGTGCCCTGTGTCCCTGCTCCTTCCGGGCTCCCAGTCCACCTGCTCATCGCCTGGCCACTCCTTGCACATCTCACACTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| 3UTR CCA 90 bp | AGGCACAGTGTGAGATGTGCAAGGAGTGGCCAGGCGATGAGCAGGTaGACTGGGAGCCCGGAAGGAGCAGGGACACAGGGCACATGCCCA | + |
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Preference number: 1 (lower is better) Translates to: RHSVRCARSGQAMSR*TGSPEGAGTQGTCP Trigger: TGGGCATGTGCCCTGTGTCCCTGCTCCTTCCGGGCTCCCAGTCCACCTGCTCATCGCCTGGCCACTCCTTGCACATCTCACACTGTGCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| 3UTR GCA 90 bp | ATTAGGCCCACAGGGGCGCTGGGGCGCCGGGCTGCTAAGCAAGCTTaGCTCAACAGCTTGAAGATACTCTACCACCGATGGAGCCAGGAG | + |
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Preference number: 1 (lower is better) Translates to: IRPTGALGRRAAKQA*LNSLKILYHRWSQE Trigger: CTCCTGGCTCCATCGGTGGTAGAGTATCTTCAAGCTGTTGAGGCAAGCTTGCTTAGCAGCCCGGCGCCCCAGCGCCCCTGTGGGCCTAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
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| 3UTR TCA 90 bp | CATGGAGGATGCGGTCCACAGAGGGGGCGGAAAGGAGAGGGTCCGTaGGTACGCGACAGGACAGCAGAAGATCATGACCCAAAGCTCATG | + |
|
Preference number: 1 (lower is better) Translates to: HGGCGPQRGRKGEGP*VRDRTAEDHDPKLM Trigger: CATGAGCTTTGGGTCATGATCTTCTGCTGTCCTGTCGCGTACTCACGGACCCTCTCCTTTCCGCCCCCTCTGTGGACCGCATCCTCCATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113552.9 |
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| 3UTR GCA 90 bp | AGGCAGGAGGGCAGGGTGTGGAAGAGGCTAAGTGGGGGCGGCTCCTaGATGGCTGCTAACCTCAGATATGGTCCTCAGCTAAAAGAAGGC | + |
|
Preference number: 1 (lower is better) Translates to: RQEGRVWKRLSGGGS*MAANLRYGPQLKEG Trigger: GCCTTCTTTTAGCTGAGGACCATATCTGAGGTTAGCAGCCATGCAGGAGCCGCCCCCACTTAGCCTCTTCCACACCCTGCCCTCCTGCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
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| 3UTR TCA 90 bp | AGGAGGCGGGGCCAAGAAAGCCTGAAGCTAATCCTTGCTTGCTCTTaGAACCCAAAGCCAGGCCCACCTTGTCAGCTGCTCCCCCACCTT | + |
|
Preference number: 1 (lower is better) Translates to: RRRGQESLKLILACS*NPKPGPPCQLLPHL Trigger: AAGGTGGGGGAGCAGCTGACAAGGTGGGCCTGGCTTTGGGTTTCAAGAGCAAGCAAGGATTAGCTTCAGGCTTTCTTGGCCCCGCCTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| 3UTR CCA 90 bp | TTGATGGCCTTGAGGTGGGCTGTCATGATGGGCACCATTCAGTCCTaGGCTTGGCAGCTGCCTCTGCACATGCCCAGTGTTATTCTCCGC | + |
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Preference number: 1 (lower is better) Translates to: LMALRWAVMMGTIQS*AWQLPLHMPSVILR Trigger: GCGGAGAATAACACTGGGCATGTGCAGAGGCAGCTGCCAAGCCCAGGACTGAATGGTGCCCATCATGACAGCCCACCTCAAGGCCATCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
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| 3UTR CCA 90 bp | AGGATGGGGGTGGGTGACAGGGCTGTGAGGTCAGTGATGTTAGTGTaGGTGACCCGGTCCTGGGACAACGCATCTGCAATAAGACAGAGG | + |
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Preference number: 1 (lower is better) Translates to: RMGVGDRAVRSVMLV*VTRSWDNASAIRQR Trigger: CCTCTGTCTTATTGCAGATGCGTTGTCCCAGGACCGGGTCACCCACACTAACATCACTGACCTCACAGCCCTGTCACCCACCCCCATCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113552.9 |
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| 3UTR GCA 90 bp | GCCTTGAGTACTTCTGTACCAGGAAAGGAGAGAGTGGCTCAAAGGTaGGAAGGACCACCTCGGTACTCCCCCAAGCTCCACCACTCTAGG | + |
|
Preference number: 1 (lower is better) Translates to: ALSTSVPGKERVAQR*EGPPRYSPKLHHSR Trigger: CCTAGAGTGGTGGAGCTTGGGGGAGTACCGAGGTGGTCCTTCGCACCTTTGAGCCACTCTCTCCTTTCCTGGTACAGAAGTACTCAAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| 3UTR CCA 90 bp | GTAATACTGGCCCCAATGCATGGATGTCAGCACTTCCACAAACCGTaGACAAAGCACAGGCCCAACCCTGAGGACCTGCCCTCTCTGTCC | + |
|
Preference number: 1 (lower is better) Translates to: VILAPMHGCQHFHKP*TKHRPNPEDLPSLS Trigger: GGACAGAGAGGGCAGGTCCTCAGGGTTGGGCCTGTGCTTTGTCCACGGTTTGTGGAAGTGCTGACATCCATGCATTGGGGCCAGTATTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| 3UTR CCA 90 bp | GGTTCTGGAGTTAGATGCCTGGTAACCTGCTGGAGCGAAACTGCCTaGGCCACAGGTCAGACTAACTGTGTCAGCGCTGAGACCCTGACT | + |
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Preference number: 1 (lower is better) Translates to: GSGVRCLVTCWSETA*ATGQTNCVSAETLT Trigger: AGTCAGGGTCTCAGCGCTGACACAGTTAGTCTGACCTGTGGCCCAGGCAGTTTCGCTCCAGCAGGTTACCAGGCATCTAACTCCAGAACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| 3UTR GCA 90 bp | TGTGGTCAGCCCAACTTGCTGAAAGTCAGAGGTTCTGGAGTTAGATaGCTGGTAACCTGCTGGAGCGAAACTGCCTGGGCCACAGGTCAG | + |
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Preference number: 1 (lower is better) Translates to: CGQPNLLKVRGSGVR*LVTCWSETAWATGQ Trigger: CTGACCTGTGGCCCAGGCAGTTTCGCTCCAGCAGGTTACCAGGCATCTAACTCCAGAACCTCTGACTTTCAGCAAGTTGGGCTGACCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| 3UTR GCA 90 bp | CAAGACCAAGACCTGACAGCTCTGAGGGCCTTCCCAACAGTGCCCTaGCCTCAAGGCTTAGAATTAGCACGCACACACACACACACACAC | + |
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Preference number: 1 (lower is better) Translates to: QDQDLTALRAFPTVP*PQGLELARTHTHTH Trigger: GTGTGTGTGTGTGTGTGTGCGTGCTAATTCTAAGCCTTGAGGGCAGGGCACTGTTGGGAAGGCCCTCAGAGCTGTCAGGTCTTGGTCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 |
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| 3UTR CCA 90 bp | AGGACACATCTGACGATGAGTCCCAAGAGACGCATGGATGACAGCTaGGTGCTCAGTCCACCTGATGCACAACTGGCCCTCCTTGTCAGA | + |
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Preference number: 1 (lower is better) Translates to: RTHLTMSPKRRMDDS*VLSPPDAQLALLVR Trigger: TCTGACAAGGAGGGCCAGTTGTGCATCAGGTGGACTGAGCACCCAGCTGTCATCCATGCGTCTCTTGGGACTCATCGTCAGATGTGTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| 3UTR CCA 90 bp | GACAGGGCTGTGAGGTCAGTGATGTTAGTGTGGGTGACCCGGTCCTaGGACAACGCATCTGCAATAAGACAGAGGCCATGGCAAAGACTC | + |
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Preference number: 1 (lower is better) Translates to: DRAVRSVMLVWVTRS*DNASAIRQRPWQRL Trigger: GAGTCTTTGCCATGGCCTCTGTCTTATTGCAGATGCGTTGTCCCAGGACCGGGTCACCCACACTAACATCACTGACCTCACAGCCCTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113552.9 |
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| 3UTR GCA 90 bp | GAGGGCTTCTCCAGTCTTTCTAGCCACCTGGTCACATGCCCAATTTaGCCTTCCTCCTATCCAATCAGAAGGCTCTTCAGGGGTTCAGGG | + |
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Preference number: 1 (lower is better) Translates to: EGFSSLSSHLVTCPI*PSSYPIRRLFRGSG Trigger: CCCTGAACCCCTGAAGAGCCTTCTGATTGGATAGGAGGAAGGGCAAATTGGGCATGTGACCAGGTGGCTAGAAAGACTGGAGAAGCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
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| 3UTR GCA 90 bp | AAAGCAGCAGGTGAGAGAGAGGCAGGCGGTTTGCCGCTGGCAAACTaGTTGCCTTGTGGAGAAGGGAGGGGCTTAAGTAATTGGTTACCA | + |
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Preference number: 1 (lower is better) Translates to: KAAGEREAGGLPLAN*LPCGEGRGLSNWLP Trigger: TGGTAACCAATTACTTAAGCCCCTCCCTTCTCCACAAGGCAAGCAGTTTGCCAGCGGCAAACCGCCTGCCTCTCTCTCACCTGCTGCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
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| 3UTR GCA 90 bp | ACTTCCACAAACCGTGGACAAAGCACAGGCCCAACCCTGAGGACCTaGCCTCTCTGTCCCTGTCTCTGGTTTTGTAAGACTTCCCTGTCT | + |
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Preference number: 1 (lower is better) Translates to: TSTNRGQSTGPTLRT*PLCPCLWFCKTSLS Trigger: AGACAGGGAAGTCTTACAAAACCAGAGACAGGGACAGAGAGGGCAGGTCCTCAGGGTTGGGCCTGTGCTTTGTCCACGGTTTGTGGAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| 3UTR CCA 90 bp | CTGGCAAACTGCTTGCCTTGTGGAGAAGGGAGGGGCTTAAGTAATTaGTTACCACAGTGGCTCTGCCATGGGGAGCTTTCGAGGCTACGT | + |
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Preference number: 1 (lower is better) Translates to: LANCLPCGEGRGLSN*LPQWLCHGELSRLR Trigger: ACGTAGCCTCGAAAGCTCCCCATGGCAGAGCCACTGTGGTAACCAATTACTTAAGCCCCTCCCTTCTCCACAAGGCAAGCAGTTTGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
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| 3UTR CCA 90 bp | GGGCAACAGCTTCAAAAGCGAGCTCCATCCATTCTCTGGGGCTTCTaGAGAACAGGATCCGATGAAGAAGCAGTGGCCAGAGCCATTGGA | + |
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Preference number: 1 (lower is better) Translates to: GQQLQKRAPSILWGF*RTGSDEEAVARAIG Trigger: TCCAATGGCTCTGGCCACTGCTTCTTCATCGGATCCTGTTCTCCAGAAGCCCCAGAGAATGGATGGAGCTCGCTTTTGAAGCTGTTGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| 3UTR TCA 90 bp | CTTCCACTTAAAAGGGAACATGTTGAGTCCATTGCTTGCAACGGCTaGCACACCAGGCTCTGTTCGCAGCAAAGCTGCTCCTCTGGCCAC | + |
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Preference number: 1 (lower is better) Translates to: LPLKREHVESIACNG*HTRLCSQQSCSSGH Trigger: GTGGCCAGAGGAGCAGCTTTGCTGCGAACAGAGCCTGGTGTGTCAGCCGTTGCAAGCAATGGACTCAACATGTTCCCTTTTAAGTGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
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| 3UTR GCA 90 bp | GTCAGTGATGTTAGTGTGGGTGACCCGGTCCTGGGACAACGCATCTaGAATAAGACAGAGGCCATGGCAAAGACTCCAACACCAGAGACA | + |
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Preference number: 1 (lower is better) Translates to: VSDVSVGDPVLGQRI*NKTEAMAKTPTPET Trigger: TGTCTCTGGTGTTGGAGTCTTTGCCATGGCCTCTGTCTTATTGCAGATGCGTTGTCCCAGGACCGGGTCACCCACACTAACATCACTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113552.9 |
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| 3UTR CCA 90 bp | TTGCTGAAAGTCAGAGGTTCTGGAGTTAGATGCCTGGTAACCTGCTaGAGCGAAACTGCCTGGGCCACAGGTCAGACTAACTGTGTCAGC | + |
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Preference number: 1 (lower is better) Translates to: LLKVRGSGVRCLVTC*SETAWATGQTNCVS Trigger: GCTGACACAGTTAGTCTGACCTGTGGCCCAGGCAGTTTCGCTCCAGCAGGTTACCAGGCATCTAACTCCAGAACCTCTGACTTTCAGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| 3UTR TCA 90 bp | TTCCACAGGATGTCCACGGCAGACCGACTTTCTCAGAGAACGGCCTaGAGACGCTCATCCACCATCCTTTCTGGATGTAAGGTAGTACAG | + |
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Preference number: 1 (lower is better) Translates to: FHRMSTADRLSQRTA*RRSSTILSGCKVVQ Trigger: CTGTACTACCTTACATCCAGAAAGGATGGTGGATGAGCGTCTTCAGGCCGTTCTCTGAGAAAGTCGGTCTGCCGTGGACATCCTGTGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| 3UTR GCA 90 bp | TTTGGGACACTCAGACAAGAAATGGGTAACACAGGAAACCCGAGCTaGAACGTCAGGTTACTCAGTGTGGGCACCAGGAGAACGTTCCAG | + |
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Preference number: 1 (lower is better) Translates to: FGTLRQEMGNTGNPS*NVRLLSVGTRRTFQ Trigger: CTGGAACGTTCTCCTGGTGCCCACACTGAGTAACCTGACGTTGCAGCTCGGGTTTCCTGTGTTACCCATTTCTTGTCTGAGTGTCCCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
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| 3UTR GCA 90 bp | CCTTTGATGAGAGGGGAATCTAAGGCTGCCCAGGGCCTCACTAAATaGGAAAGCTCTCCATCGCCAGAGGGAGACAAGATGCAAGAAAAG | + |
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Preference number: 1 (lower is better) Translates to: PLMRGESKAAQGLTK*ESSPSPEGDKMQEK Trigger: CTTTTCTTGCATCTTGTCTCCCTCTGGCGATGGAGAGCTTTCGCATTTAGTGAGGCCCTGGGCAGCCTTAGATTCCCCTCTCATCAAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
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| 3UTR GCA 90 bp | AACTTGCTGAAAGTCAGAGGTTCTGGAGTTAGATGCCTGGTAACCTaGTGGAGCGAAACTGCCTGGGCCACAGGTCAGACTAACTGTGTC | + |
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Preference number: 1 (lower is better) Translates to: NLLKVRGSGVRCLVT*WSETAWATGQTNCV Trigger: GACACAGTTAGTCTGACCTGTGGCCCAGGCAGTTTCGCTCCAGCAGGTTACCAGGCATCTAACTCCAGAACCTCTGACTTTCAGCAAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| 3UTR CCA 90 bp | TTGCCTTGTGGAGAAGGGAGGGGCTTAAGTAATTGGTTACCACAGTaGCTCTGCCATGGGGAGCTTTCGAGGCTACGTCTTCTGTTTGGA | + |
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Preference number: 1 (lower is better) Translates to: LPCGEGRGLSNWLPQ*LCHGELSRLRLLFG Trigger: TCCAAACAGAAGACGTAGCCTCGAAAGCTCCCCATGGCAGAGCCACTGTGGTAACCAATTACTTAAGCCCCTCCCTTCTCCACAAGGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
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| 3UTR TCA 90 bp | CCTTGTCAGAATTTTGTTAGTCACCAGGAAACCAGGGGTGACAGTTaGCAAAGGCACAGTGTGAGATGTGCAAGGAGTGGCCAGGCGATG | + |
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Preference number: 1 (lower is better) Translates to: PCQNFVSHQETRGDS*QRHSVRCARSGQAM Trigger: CATCGCCTGGCCACTCCTTGCACATCTCACACTGTGCCTTTGTCAACTGTCACCCCTGGTTTCCTGGTGACTAACAAAATTCTGACAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| 3UTR CCA 90 bp | CCATCCTGGGCCTCTTTTGGTTGTTTGGGACACTCAGACAAGAAATaGGTAACACAGGAAACCCGAGCTGCAACGTCAGGTTACTCAGTG | + |
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Preference number: 1 (lower is better) Translates to: PSWASFGCLGHSDKK*VTQETRAATSGYSV Trigger: CACTGAGTAACCTGACGTTGCAGCTCGGGTTTCCTGTGTTACCCATTTCTTGTCTGAGTGTCCCAAACAACCAAAAGAGGCCCAGGATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
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| 3UTR CCA 90 bp | AGTGTGCACATGTGCCATGGTGCACGAAGGTCAGAGGTCAACTTCTaGGACACAGGTCAACTTAGGGGAGTTGGTCTTTTCCTTCAACCA | + |
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Preference number: 1 (lower is better) Translates to: SVHMCHGARRSEVNF*DTGQLRGVGLFLQP Trigger: TGGTTGAAGGAAAAGACCAACTCCCCTAAGTTGACCTGTGTCCCAGAAGTTGACCTCTGACCTTCGTGCACCATGGCACATGTGCACACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
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| 3UTR TCA 90 bp | TATGACTTATTTTTACTGGGTCTTACTCTGAAGCCCAGGCTAGCCTaGAACTCACTTGGATGCTCTGAAGCCCAGGCTAGCCTGAAACTC | + |
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Preference number: 1 (lower is better) Translates to: YDLFLLGLTLKPRLA*NSLGCSEAQASLKL Trigger: GAGTTTCAGGCTAGCCTGGGCTTCAGAGCATCCAAGTGAGTTTCAGGCTAGCCTGGGCTTCAGAGTAAGACCCAGTAAAAATAAGTCATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
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| 3UTR TCA 90 bp | ATACTCTACCACCGATGGAGCCAGGAGATGAATGTCAAGTCAAAATaGATCGCTCAAGGAGTGCACCATCCTGGGCCTCTTTTGGTTGTT | + |
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Preference number: 1 (lower is better) Translates to: ILYHRWSQEMNVKSK*IAQGVHHPGPLLVV Trigger: AACAACCAAAAGAGGCCCAGGATGGTGCACTCCTTGAGCGATTCATTTTGACTTGACATTCATCTCCTGGCTCCATCGGTGGTAGAGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
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| 3UTR GCA 90 bp | GGCTTCAGGAAGGCCATGGGGACCTCTTTGTGCCACTTATGTAACTaGCAACAGCCAGTCACTACTATGAAATATTGTCTTTATCTTGGC | + |
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Preference number: 1 (lower is better) Translates to: GFRKAMGTSLCHLCN*QQPVTTMKYCLYLG Trigger: GCCAAGATAAAGACAATATTTCATAGTAGTGACTGGCTGTTGGCAGTTACATAAGTGGCACAAAGAGGTCCCCATGGCCTTCCTGAAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
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| 3UTR CCA 90 bp | AGTCAAAATGAATCGCTCAAGGAGTGCACCATCCTGGGCCTCTTTTaGTTGTTTGGGACACTCAGACAAGAAATGGGTAACACAGGAAAC | + |
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Preference number: 1 (lower is better) Translates to: SQNESLKECTILGLF*LFGTLRQEMGNTGN Trigger: GTTTCCTGTGTTACCCATTTCTTGTCTGAGTGTCCCAAACAACCAAAAGAGGCCCAGGATGGTGCACTCCTTGAGCGATTCATTTTGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
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| 3UTR CCA 90 bp | GGCCGTTCACCAGCTCACTGCTGGACCTCTCTCTTTGAGATGTTTTaGGCTTTGTTTTTAAGACAGGGTCTATCTTATGTAGTTCTAGTT | + |
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Preference number: 1 (lower is better) Translates to: GRSPAHCWTSLFEMF*ALFLRQGLSYVVLV Trigger: AACTAGAACTACATAAGATAGACCCTGTCTTAAAAACAAAGCCCAAAACATCTCAAAGAGAGAGGTCCAGCAGTGAGCTGGTGAACGGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
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| 3UTR CAA 90 bp | GGGAGCCCGGAAGGAGCAGGGACACAGGGCACATGCCCAGCTGTCTaGGTGGCCTGGGTGGGAAGGGAGCAGAGTAAAGTGGACAGCCCC | + |
|
Preference number: 2 (lower is better) Translates to: GSPEGAGTQGTCPAV*VAWVGREQSKVDSP Trigger: GGGGCTGTCCACTTTACTCTGCTCCCTTCCCACCCAGGCCACCAAGACAGCTGGGCATGTGCCCTGTGTCCCTGCTCCTTCCGGGCTCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| 3UTR-3UTR CCA 90 bp | GTCAGCACTTCCACAAACCGTGGACAAAGCACAGGCCCAACCCTGAGGACCTGCGACCCAGCCTGCAGGTaGGCTGGAGGCTGCCCAGCC | + |
|
Preference number: 2 (lower is better) Translates to: VSTSTNRGQSTGPTLRTCDPACR*AGGCPA Trigger: GGCTGGGCAGCCTCCAGCCCACCTGCAGGCTGGGTC...GCAGGTCCTCAGGGTTGGGCCTGTGCTTTGTCCACGGTTTGTGGAAGTGCTGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| 3UTR-3UTR CCA 90 bp | CACCCGTGCCGTACACAGGCAGAGGGACTGGCGGAGCCACAGGAACATGCTGTGAGGGGAGGCAGGATATaGGGACCCAGCCTGCAGGTG | + |
|
Preference number: 2 (lower is better) Translates to: HPCRTQAEGLAEPQEHAVRGGRI*GPSLQV Trigger: CACCTGCAGGCTGGGTCCCCATATCCTGCCTCCCCT...CACAGCATGTTCCTGTGGCTCCGCCAGTCCCTCTGCCTGTGTACGGCACGGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| 3UTR-3UTR TCA 90 bp | CTAGGTCTTCCTCATGTGAGTCCTGAACAGCCTCACAGGGGTCCCAGAGGGCAGAAGCGGGCTGGACGATaGTGGCTCCCTCCCGGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: LGLPHVSPEQPHRGPRGQKRAGR*WLPPGR Trigger: CCTCCCGGGAGGGAGCCATCATCGTCCAGCCCGCTT...CTGCCCTCTGGGACCCCTGTGAGGCTGTTCAGGACTCACATGAGGAAGACCTAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| 3UTR-3UTR GCA 90 bp | CACCCGTGCCGTACACAGGCAGAGGGACTGGCGGAGCCACAGGAACATGCTGTGAGTCTGAGGTGTGGCTaGTGGGGCTTCAGGAAGGCC | + |
|
Preference number: 2 (lower is better) Translates to: HPCRTQAEGLAEPQEHAVSLRCG*WGFRKA Trigger: GGCCTTCCTGAAGCCCCAGCAGCCACACCTCAGACT...CACAGCATGTTCCTGTGGCTCCGCCAGTCCCTCTGCCTGTGTACGGCACGGGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| 3UTR-3UTR GCA 90 bp | GCCTCCCTGTGTGTTGTTTGGGCTGGGGCCCTGGATAAGCATGCTCAGCCTAGAGGGCAGAGGGCAGTGTaGCGGGCTTGGCCTTACGGG | + |
|
Preference number: 2 (lower is better) Translates to: ASLCVVWAGALDKHAQPRGQRAV*RAWPYG Trigger: CCCGTAAGGCCAAGCCCGGCACACTGCCCTCTGCCC...TCTAGGCTGAGCATGCTTATCCAGGGCCCCAGCCCAAACAACACACAGGGAGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 |
||
| 3UTR-3UTR CCA 90 bp | GCCTCCCTGTGTGTTGTTTGGGCTGGGGCCCTGGATAAGCATGCTCAGCCTAGAAGCCTGCAGGTGGGCTaGAGGCTGCCCAGCCAGCCT | + |
|
Preference number: 2 (lower is better) Translates to: ASLCVVWAGALDKHAQPRSLQVG*RLPSQP Trigger: AGGCTGGCTGGGCAGCCTCCAGCCCACCTGCAGGCT...TCTAGGCTGAGCATGCTTATCCAGGGCCCCAGCCCAAACAACACACAGGGAGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 |
||
| 3UTR-3UTR TCA 90 bp | GCCTCCCTGTGTGTTGTTTGGGCTGGGGCCCTGGATAAGCATGCTCAGCCTAGAGCACAGGCCCAACCCTaGGGACCTGCCCTCTCTGTC | + |
|
Preference number: 2 (lower is better) Translates to: ASLCVVWAGALDKHAQPRAQAQP*GPALSV Trigger: GACAGAGAGGGCAGGTCCTCAGGGTTGGGCCTGTGC...TCTAGGCTGAGCATGCTTATCCAGGGCCCCAGCCCAAACAACACACAGGGAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 |
||
| 3UTR-3UTR CCA 90 bp | GTAACCTGCTGGAGCGAAACTGCCTGGGCCACAGGTCAGACTAACTGTGTCAGCAGCCTGCAGGTGGGCTaGAGGCTGCCCAGCCAGCCT | + |
|
Preference number: 2 (lower is better) Translates to: VTCWSETAWATGQTNCVSSLQVG*RLPSQP Trigger: AGGCTGGCTGGGCAGCCTCCAGCCCACCTGCAGGCT...GCTGACACAGTTAGTCTGACCTGTGGCCCAGGCAGTTTCGCTCCAGCAGGTTAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| 3UTR-3UTR CCA 90 bp | CTGGATAAGCATGCTCAGCCTAGAGGGAGGGGCCATTGCAGCTTCACGTCCTGCGCCCAGCTGTCTTGGTaGCCTGGGTGGGAAGGGAGC | + |
|
Preference number: 2 (lower is better) Translates to: LDKHAQPRGRGHCSFTSCAQLSW*PGWEGS Trigger: GCTCCCTTCCCACCCAGGCCACCAAGACAGCTGGGC...GCAGGACGTGAAGCTGCAATGGCCCCTCCCTCTAGGCTGAGCATGCTTATCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 |
||
| 3UTR-3UTR TCA 90 bp | CACCCGTGCCGTACACAGGCAGAGGGACTGGCGGAGCCACAGGAACATGCTGTGAAGCCCAGGCTAGCCTaGAACTCACTTGGCTACTCC | + |
|
Preference number: 2 (lower is better) Translates to: HPCRTQAEGLAEPQEHAVKPRLA*NSLGYS Trigger: GGAGTAGCCAAGTGAGTTTCAGGCTAGCCTGGGCTT...CACAGCATGTTCCTGTGGCTCCGCCAGTCCCTCTGCCTGTGTACGGCACGGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| 3UTR-3UTR TCA 90 bp | GTAACCTGCTGGAGCGAAACTGCCTGGGCCACAGGTCAGACTAACTGTGTCAGCGCACAGGCCCAACCCTaGGGACCTGCCCTCTCTGTC | + |
|
Preference number: 2 (lower is better) Translates to: VTCWSETAWATGQTNCVSAQAQP*GPALSV Trigger: GACAGAGAGGGCAGGTCCTCAGGGTTGGGCCTGTGC...GCTGACACAGTTAGTCTGACCTGTGGCCCAGGCAGTTTCGCTCCAGCAGGTTAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| 3UTR-3UTR CCA 90 bp | AGAGGCAGGCGGTTTGCCGCTGGCAAACTGCTTGCCTTGTGGAGAAGGGAGGGGGGGGCGGCTCCTGCATaGCTGCTAACCTCAGATATG | + |
|
Preference number: 2 (lower is better) Translates to: RGRRFAAGKLLALWRREGGAAPA*LLTSDM Trigger: CATATCTGAGGTTAGCAGCCATGCAGGAGCCGCCCC...CCCCTCCCTTCTCCACAAGGCAAGCAGTTTGCCAGCGGCAAACCGCCTGCCTCT 61% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| 3UTR-3UTR CCA 90 bp | GTCAGCACTTCCACAAACCGTGGACAAAGCACAGGCCCAACCCTGAGGACCTGCAGGGGAGGCAGGATATaGGGACCCAGCCTGCAGGTG | + |
|
Preference number: 2 (lower is better) Translates to: VSTSTNRGQSTGPTLRTCRGGRI*GPSLQV Trigger: CACCTGCAGGCTGGGTCCCCATATCCTGCCTCCCCT...GCAGGTCCTCAGGGTTGGGCCTGTGCTTTGTCCACGGTTTGTGGAAGTGCTGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| 3UTR-3UTR CCA 90 bp | GTCAGCACTTCCACAAACCGTGGACAAAGCACAGGCCCAACCCTGAGGACCTGCCATGCCCAGCTGTCTTaGTGGCCTGGGTGGGAAGGG | + |
|
Preference number: 2 (lower is better) Translates to: VSTSTNRGQSTGPTLRTCHAQLS*WPGWEG Trigger: CCCTTCCCACCCAGGCCACCAAGACAGCTGGGCATG...GCAGGTCCTCAGGGTTGGGCCTGTGCTTTGTCCACGGTTTGTGGAAGTGCTGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| 3UTR-3UTR CCA 90 bp | CTAGGTCTTCCTCATGTGAGTCCTGAACAGCCTCACAGGGGTCCCAGAGGGCAGCAGGCGATGAGCAGGTaGACTGGGAGCCCGGAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: LGLPHVSPEQPHRGPRGQQAMSR*TGSPEG Trigger: TCCTTCCGGGCTCCCAGTCCACCTGCTCATCGCCTG...CTGCCCTCTGGGACCCCTGTGAGGCTGTTCAGGACTCACATGAGGAAGACCTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| 3UTR-3UTR CCA 90 bp | GCCTCCCTGTGTGTTGTTTGGGCTGGGGCCCTGGATAAGCATGCTCAGCCTAGACAGGCGATGAGCAGGTaGACTGGGAGCCCGGAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: ASLCVVWAGALDKHAQPRQAMSR*TGSPEG Trigger: TCCTTCCGGGCTCCCAGTCCACCTGCTCATCGCCTG...TCTAGGCTGAGCATGCTTATCCAGGGCCCCAGCCCAAACAACACACAGGGAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 |
||
| 3UTR-3UTR TCA 90 bp | GCCTCCCTGTGTGTTGTTTGGGCTGGGGCCCTGGATAAGCATGCTCAGCCTAGAATGACAGGGAAGGCCTaGGGCAGCAGCCTCTGGACA | + |
|
Preference number: 2 (lower is better) Translates to: ASLCVVWAGALDKHAQPRMTGKA*GSSLWT Trigger: TGTCCAGAGGCTGCTGCCTCAGGCCTTCCCTGTCAT...TCTAGGCTGAGCATGCTTATCCAGGGCCCCAGCCCAAACAACACACAGGGAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 |
||
| 3UTR-3UTR CCA 90 bp | CTGGATAAGCATGCTCAGCCTAGAGGGAGGGGCCATTGCAGCTTCACGTCCTGCGCTGTCTTGGTGGCCTaGGTGGGAAGGGAGCAGAGT | + |
|
Preference number: 2 (lower is better) Translates to: LDKHAQPRGRGHCSFTSCAVLVA*VGREQS Trigger: ACTCTGCTCCCTTCCCACCCAGGCCACCAAGACAGC...GCAGGACGTGAAGCTGCAATGGCCCCTCCCTCTAGGCTGAGCATGCTTATCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 |
||
| 3UTR CAA 90 bp | GAGGAGGCGGGGCCAAGAAAGCCTGAAGCTAATCCTTGCTTGCTCTaGAAACCCAAAGCCAGGCCCACCTTGTCAGCTGCTCCCCCACCT | + |
|
Preference number: 2 (lower is better) Translates to: EEAGPRKPEANPCLL*KPKARPTLSAAPPP Trigger: AGGTGGGGGAGCAGCTGACAAGGTGGGCCTGGCTTTGGGTTTCAAGAGCAAGCAAGGATTAGCTTCAGGCTTTCTTGGCCCCGCCTCCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| 3UTR CAA 90 bp | TACGGGGAGGAGGCGGGGCCAAGAAAGCCTGAAGCTAATCCTTGCTaGCTCTTGAAACCCAAAGCCAGGCCCACCTTGTCAGCTGCTCCC | + |
|
Preference number: 2 (lower is better) Translates to: YGEEAGPRKPEANPC*LLKPKARPTLSAAP Trigger: GGGAGCAGCTGACAAGGTGGGCCTGGCTTTGGGTTTCAAGAGCAAGCAAGGATTAGCTTCAGGCTTTCTTGGCCCCGCCTCCTCCCCGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| 3UTR-3UTR TCA 90 bp | GTCAGCACTTCCACAAACCGTGGACAAAGCACAGGCCCAACCCTGAGGACCTGCCACAGGAACATGCTGTaGAGGAGAAGGGGAGGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: VSTSTNRGQSTGPTLRTCHRNML*RRRGGR Trigger: CCTGCCTCCCCTTCTCCTTCACAGCATGTTCCTGTG...GCAGGTCCTCAGGGTTGGGCCTGTGCTTTGTCCACGGTTTGTGGAAGTGCTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| 3UTR-3UTR TCA 90 bp | CTAGGTCTTCCTCATGTGAGTCCTGAACAGCCTCACAGGGGTCCCAGAGGGCAGCACAGGAACATGCTGTaGAGGAGAAGGGGAGGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: LGLPHVSPEQPHRGPRGQHRNML*RRRGGR Trigger: CCTGCCTCCCCTTCTCCTTCACAGCATGTTCCTGTG...CTGCCCTCTGGGACCCCTGTGAGGCTGTTCAGGACTCACATGAGGAAGACCTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| 3UTR-3UTR TCA 90 bp | GCCTCCCTGTGTGTTGTTTGGGCTGGGGCCCTGGATAAGCATGCTCAGCCTAGAGGTAACAGTGCTGGATaGCAGGGAAGGCCTGAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: ASLCVVWAGALDKHAQPRGNSAG*QGRPEA Trigger: TGCCTCAGGCCTTCCCTGTCATCCAGCACTGTTACC...TCTAGGCTGAGCATGCTTATCCAGGGCCCCAGCCCAAACAACACACAGGGAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 |
||
| 3UTR-3UTR TCA 90 bp | CTAGGTCTTCCTCATGTGAGTCCTGAACAGCCTCACAGGGGTCCCAGAGGGCAGGGTAACAGTGCTGGATaGCAGGGAAGGCCTGAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: LGLPHVSPEQPHRGPRGQGNSAG*QGRPEA Trigger: TGCCTCAGGCCTTCCCTGTCATCCAGCACTGTTACC...CTGCCCTCTGGGACCCCTGTGAGGCTGTTCAGGACTCACATGAGGAAGACCTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| 3UTR-3UTR GCA 90 bp | ATGACAGCTGGGTGCTCAGTCCACCTGATGCACAACTGGCCCTCCTTGTCAGAAGGGACACAGGGCACATaGCCAGCTGTCTTGGTGGCC | + |
|
Preference number: 2 (lower is better) Translates to: MTAGCSVHLMHNWPSLSEGTQGT*PAVLVA Trigger: GGCCACCAAGACAGCTGGGCATGTGCCCTGTGTCCC...TTCTGACAAGGAGGGCCAGTTGTGCATCAGGTGGACTGAGCACCCAGCTGTCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| 3UTR-3UTR GCA 90 bp | GTAACCTGCTGGAGCGAAACTGCCTGGGCCACAGGTCAGACTAACTGTGTCAGCCCAACCCTGAGGACCTaGCCTCTCTGTCCCTGTCTC | + |
|
Preference number: 2 (lower is better) Translates to: VTCWSETAWATGQTNCVSPTLRT*PLCPCL Trigger: GAGACAGGGACAGAGAGGGCAGGTCCTCAGGGTTGG...GCTGACACAGTTAGTCTGACCTGTGGCCCAGGCAGTTTCGCTCCAGCAGGTTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| 3UTR-3UTR GCA 90 bp | CTAGGTCTTCCTCATGTGAGTCCTGAACAGCCTCACAGGGGTCCCAGAGGGCAGTGGTACCCTCCCCTCTaGTCTGAGGTGGTACCTCAC | + |
|
Preference number: 2 (lower is better) Translates to: LGLPHVSPEQPHRGPRGQWYPPL*SEVVPH Trigger: GTGAGGTACCACCTCAGAGCAGAGGGGAGGGTACCA...CTGCCCTCTGGGACCCCTGTGAGGCTGTTCAGGACTCACATGAGGAAGACCTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| 3UTR-3UTR CCA 90 bp | GTAACCTGCTGGAGCGAAACTGCCTGGGCCACAGGTCAGACTAACTGTGTCAGCCACAGGCAGAGGGACTaGCGGAGCCACAGGAACATG | + |
|
Preference number: 2 (lower is better) Translates to: VTCWSETAWATGQTNCVSHRQRD*RSHRNM Trigger: CATGTTCCTGTGGCTCCGCCAGTCCCTCTGCCTGTG...GCTGACACAGTTAGTCTGACCTGTGGCCCAGGCAGTTTCGCTCCAGCAGGTTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| 3UTR-3UTR CCA 90 bp | GTAACCTGCTGGAGCGAAACTGCCTGGGCCACAGGTCAGACTAACTGTGTCAGCGCTGTCTTGGTGGCCTaGGTGGGAAGGGAGCAGAGT | + |
|
Preference number: 2 (lower is better) Translates to: VTCWSETAWATGQTNCVSAVLVA*VGREQS Trigger: ACTCTGCTCCCTTCCCACCCAGGCCACCAAGACAGC...GCTGACACAGTTAGTCTGACCTGTGGCCCAGGCAGTTTCGCTCCAGCAGGTTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| 3UTR CAA 90 bp | GAAGCTAATCCTTGCTTGCTCTTGAAACCCAAAGCCAGGCCCACCTaGTCAGCTGCTCCCCCACCTTGGTACCCTCCCCTCTGCTCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: EANPCLLLKPKARPT*SAAPPPWYPPLCSE Trigger: CTCAGAGCAGAGGGGAGGGTACCAAGGTGGGGGAGCAGCTGACAAGGTGGGCCTGGCTTTGGGTTTCAAGAGCAAGCAAGGATTAGCTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| 3UTR-3UTR TCA 90 bp | CACCCGTGCCGTACACAGGCAGAGGGACTGGCGGAGCCACAGGAACATGCTGTGCAGTTGAACCAAGTCTaGGCAAAATTAGGCCCACAG | + |
|
Preference number: 2 (lower is better) Translates to: HPCRTQAEGLAEPQEHAVQLNQV*AKLGPQ Trigger: CTGTGGGCCTAATTTTGCTCAGACTTGGTTCAACTG...CACAGCATGTTCCTGTGGCTCCGCCAGTCCCTCTGCCTGTGTACGGCACGGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| 3UTR-3UTR GCA 90 bp | GCCTCCCTGTGTGTTGTTTGGGCTGGGGCCCTGGATAAGCATGCTCAGCCTAGAGGAGCCACAGGAACATaGTGTGAAGGAGAAGGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: ASLCVVWAGALDKHAQPRGATGT*CEGEGE Trigger: CTCCCCTTCTCCTTCACAGCATGTTCCTGTGGCTCC...TCTAGGCTGAGCATGCTTATCCAGGGCCCCAGCCCAAACAACACACAGGGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 |
||
| 3UTR-3UTR GCA 90 bp | GTCAGCACTTCCACAAACCGTGGACAAAGCACAGGCCCAACCCTGAGGACCTGCGGAGCCACAGGAACATaGTGTGAAGGAGAAGGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: VSTSTNRGQSTGPTLRTCGATGT*CEGEGE Trigger: CTCCCCTTCTCCTTCACAGCATGTTCCTGTGGCTCC...GCAGGTCCTCAGGGTTGGGCCTGTGCTTTGTCCACGGTTTGTGGAAGTGCTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| 3UTR-3UTR GCA 90 bp | CTAGGTCTTCCTCATGTGAGTCCTGAACAGCCTCACAGGGGTCCCAGAGGGCAGTGGATGACAGCTGGGTaGTCAGTCCACCTGATGCAC | + |
|
Preference number: 2 (lower is better) Translates to: LGLPHVSPEQPHRGPRGQWMTAG*SVHLMH Trigger: GTGCATCAGGTGGACTGAGCACCCAGCTGTCATCCA...CTGCCCTCTGGGACCCCTGTGAGGCTGTTCAGGACTCACATGAGGAAGACCTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| 3UTR-3UTR GCA 90 bp | GTCAGCACTTCCACAAACCGTGGACAAAGCACAGGCCCAACCCTGAGGACCTGCAGAGTGGCTCAAAGGTaGGAAGGACCACCTCGGTAC | + |
|
Preference number: 2 (lower is better) Translates to: VSTSTNRGQSTGPTLRTCRVAQR*EGPPRY Trigger: GTACCGAGGTGGTCCTTCGCACCTTTGAGCCACTCT...GCAGGTCCTCAGGGTTGGGCCTGTGCTTTGTCCACGGTTTGTGGAAGTGCTGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| 3UTR-3UTR CCA 90 bp | CCAGAGCCAGTACAGTTCCACAGGATGTCCACGGCAGACCGACTTTCTCAGAGAGGCACCATTCAGTCCTaGGCTTGGCAGCTGCCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: PEPVQFHRMSTADRLSQRGTIQS*AWQLPL Trigger: CAGAGGCAGCTGCCAAGCCCAGGACTGAATGGTGCC...TCTCTGAGAAAGTCGGTCTGCCGTGGACATCCTGTGGAACTGTACTGGCTCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| 3UTR-3UTR CCA 90 bp | ATGACAGCTGGGTGCTCAGTCCACCTGATGCACAACTGGCCCTCCTTGTCAGAACACAGGCAGAGGGACTaGCGGAGCCACAGGAACATG | + |
|
Preference number: 2 (lower is better) Translates to: MTAGCSVHLMHNWPSLSEHRQRD*RSHRNM Trigger: CATGTTCCTGTGGCTCCGCCAGTCCCTCTGCCTGTG...TTCTGACAAGGAGGGCCAGTTGTGCATCAGGTGGACTGAGCACCCAGCTGTCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| 3UTR-3UTR CCA 90 bp | GTCAGCACTTCCACAAACCGTGGACAAAGCACAGGCCCAACCCTGAGGACCTGCTCTTGGTGGCCTGGGTaGGAAGGGAGCAGAGTAAAG | + |
|
Preference number: 2 (lower is better) Translates to: VSTSTNRGQSTGPTLRTCSWWPG*EGSRVK Trigger: CTTTACTCTGCTCCCTTCCCACCCAGGCCACCAAGA...GCAGGTCCTCAGGGTTGGGCCTGTGCTTTGTCCACGGTTTGTGGAAGTGCTGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| 3UTR-3UTR CCA 90 bp | ATGACAGCTGGGTGCTCAGTCCACCTGATGCACAACTGGCCCTCCTTGTCAGAAGCTGTCTTGGTGGCCTaGGTGGGAAGGGAGCAGAGT | + |
|
Preference number: 2 (lower is better) Translates to: MTAGCSVHLMHNWPSLSEAVLVA*VGREQS Trigger: ACTCTGCTCCCTTCCCACCCAGGCCACCAAGACAGC...TTCTGACAAGGAGGGCCAGTTGTGCATCAGGTGGACTGAGCACCCAGCTGTCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| 3UTR-3UTR CCA 90 bp | GTCAGCACTTCCACAAACCGTGGACAAAGCACAGGCCCAACCCTGAGGACCTGCCGCATGGATGACAGCTaGGTGCTCAGTCCACCTGAT | + |
|
Preference number: 2 (lower is better) Translates to: VSTSTNRGQSTGPTLRTCRMDDS*VLSPPD Trigger: ATCAGGTGGACTGAGCACCCAGCTGTCATCCATGCG...GCAGGTCCTCAGGGTTGGGCCTGTGCTTTGTCCACGGTTTGTGGAAGTGCTGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| 3UTR-3UTR CCA 90 bp | CTGGATAAGCATGCTCAGCCTAGAGGGAGGGGCCATTGCAGCTTCACGTCCTGCCTCAAATGCTACTTATaGGACTCCGCAGGCCCGCCT | + |
|
Preference number: 2 (lower is better) Translates to: LDKHAQPRGRGHCSFTSCLKCYL*DSAGPP Trigger: AGGCGGGCCTGCGGAGTCCCATAAGTAGCATTTGAG...GCAGGACGTGAAGCTGCAATGGCCCCTCCCTCTAGGCTGAGCATGCTTATCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 |
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| 3UTR CAA 90 bp | GCAGCAGGTGAGAGAGAGGCAGGCGGTTTGCCGCTGGCAAACTGCTaGCCTTGTGGAGAAGGGAGGGGCTTAAGTAATTGGTTACCACAG | + |
|
Preference number: 2 (lower is better) Translates to: AAGEREAGGLPLANC*PCGEGRGLSNWLPQ Trigger: CTGTGGTAACCAATTACTTAAGCCCCTCCCTTCTCCACAAGGCAAGCAGTTTGCCAGCGGCAAACCGCCTGCCTCTCTCTCACCTGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
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| 3UTR CAA 90 bp | AACCCTGAGTTAGGAAAAGCAGCAGGTGAGAGAGAGGCAGGCGGTTaGCCGCTGGCAAACTGCTTGCCTTGTGGAGAAGGGAGGGGCTTA | + |
|
Preference number: 2 (lower is better) Translates to: NPELGKAAGEREAGG*PLANCLPCGEGRGL Trigger: TAAGCCCCTCCCTTCTCCACAAGGCAAGCAGTTTGCCAGCGGCAAACCGCCTGCCTCTCTCTCACCTGCTGCTTTTCCTAACTCAGGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| 3UTR-3UTR GCA 90 bp | GTAACCTGCTGGAGCGAAACTGCCTGGGCCACAGGTCAGACTAACTGTGTCAGCGCACAGTGTGAGATGTaGAAGGAGTGGCCAGGCGAT | + |
|
Preference number: 2 (lower is better) Translates to: VTCWSETAWATGQTNCVSAQCEM*KEWPGD Trigger: ATCGCCTGGCCACTCCTTGCACATCTCACACTGTGC...GCTGACACAGTTAGTCTGACCTGTGGCCCAGGCAGTTTCGCTCCAGCAGGTTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| 3UTR-3UTR GCA 90 bp | GTAACCTGCTGGAGCGAAACTGCCTGGGCCACAGGTCAGACTAACTGTGTCAGCAGAGTGGCTCAAAGGTaGGAAGGACCACCTCGGTAC | + |
|
Preference number: 2 (lower is better) Translates to: VTCWSETAWATGQTNCVSRVAQR*EGPPRY Trigger: GTACCGAGGTGGTCCTTCGCACCTTTGAGCCACTCT...GCTGACACAGTTAGTCTGACCTGTGGCCCAGGCAGTTTCGCTCCAGCAGGTTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| 3UTR-3UTR CCA 90 bp | GTAACCTGCTGGAGCGAAACTGCCTGGGCCACAGGTCAGACTAACTGTGTCAGCCCGATGAAGAAGCAGTaGCCAGAGCCATTGGAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: VTCWSETAWATGQTNCVSPMKKQ*PEPLEG Trigger: TCCCTCCAATGGCTCTGGCCACTGCTTCTTCATCGG...GCTGACACAGTTAGTCTGACCTGTGGCCCAGGCAGTTTCGCTCCAGCAGGTTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| 3UTR-3UTR CCA 90 bp | CTGGATAAGCATGCTCAGCCTAGAGGGAGGGGCCATTGCAGCTTCACGTCCTGCGCTCCATCCATTCTCTaGGGCTTCTGGAGAACAGGA | + |
|
Preference number: 2 (lower is better) Translates to: LDKHAQPRGRGHCSFTSCAPSIL*GFWRTG Trigger: TCCTGTTCTCCAGAAGCCCCAGAGAATGGATGGAGC...GCAGGACGTGAAGCTGCAATGGCCCCTCCCTCTAGGCTGAGCATGCTTATCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 |
||
| 3UTR-3UTR TCA 90 bp | ATGACAGCTGGGTGCTCAGTCCACCTGATGCACAACTGGCCCTCCTTGTCAGAAGACAAAGGCACAGTGTaGGATGTGCAAGGAGTGGCC | + |
|
Preference number: 2 (lower is better) Translates to: MTAGCSVHLMHNWPSLSEDKGTV*DVQGVA Trigger: GGCCACTCCTTGCACATCTCACACTGTGCCTTTGTC...TTCTGACAAGGAGGGCCAGTTGTGCATCAGGTGGACTGAGCACCCAGCTGTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| 3UTR-3UTR CCA 90 bp | TGGCACAACAGCCCTGGCCTTTTAGTTCCCATGTTTAGCTGGCCCCATTTCTGGTCACTTGGCTACTCCTaGCTCCGCCTCCTGAGAGCT | + |
|
Preference number: 2 (lower is better) Translates to: WHNSPGLLVPMFSWPHFWSLGYS*LRLLRA Trigger: AGCTCTCAGGAGGCGGAGCCAGGAGTAGCCAAGTGA...CCAGAAATGGGGCCAGCTAAACATGGGAACTAAAAGGCCAGGGCTGTTGTGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| 3UTR-3UTR CCA 90 bp | CTAGGTCTTCCTCATGTGAGTCCTGAACAGCCTCACAGGGGTCCCAGAGGGCAGGCAAAGCTGCTCCTCTaGCCACAAACAGTTGAACCA | + |
|
Preference number: 2 (lower is better) Translates to: LGLPHVSPEQPHRGPRGQAKLLL*PQTVEP Trigger: TGGTTCAACTGTTTGTGGCCAGAGGAGCAGCTTTGC...CTGCCCTCTGGGACCCCTGTGAGGCTGTTCAGGACTCACATGAGGAAGACCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
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| 3UTR-3UTR CCA 90 bp | CTAGGTCTTCCTCATGTGAGTCCTGAACAGCCTCACAGGGGTCCCAGAGGGCAGACTGGCCCCAATGCATaGATGTCAGCACTTCCACAA | + |
|
Preference number: 2 (lower is better) Translates to: LGLPHVSPEQPHRGPRGQTGPNA*MSALPQ Trigger: TTGTGGAAGTGCTGACATCCATGCATTGGGGCCAGT...CTGCCCTCTGGGACCCCTGTGAGGCTGTTCAGGACTCACATGAGGAAGACCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| 3UTR CAA 90 bp | GCTTCTGGAGAACAGGATCCGATGAAGAAGCAGTGGCCAGAGCCATaGGAGGGACTACAAGAGGCACAAGGTCTTTGGTGGGAACAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: ASGEQDPMKKQWPEP*EGLQEAQGLWWEQR Trigger: CCTCTGTTCCCACCAAAGACCTTGTGCCTCTTGTAGTCCCTCCAATGGCTCTGGCCACTGCTTCTTCATCGGATCCTGTTCTCCAGAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| 3UTR CAA 90 bp | CTCATACTTGTGGGGCACCCTTCACAGGGGCTTGTGGCCAAAGCCTaGAGTACTTCTGTACCAGGAAAGGAGAGAGTGGCTCAAAGGTGC | + |
|
Preference number: 2 (lower is better) Translates to: LILVGHPSQGLVAKA*STSVPGKERVAQRC Trigger: GCACCTTTGAGCCACTCTCTCCTTTCCTGGTACAGAAGTACTCAAGGCTTTGGCCACAAGCCCCTGTGAAGGGTGCCCCACAAGTATGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| 3UTR-3UTR TCA 90 bp | ATGACAGCTGGGTGCTCAGTCCACCTGATGCACAACTGGCCCTCCTTGTCAGAAAAGCAGGTGAATCTCTaGGTTCAAGGCCAGCCTGGT | + |
|
Preference number: 2 (lower is better) Translates to: MTAGCSVHLMHNWPSLSEKQVNL*VQGQPG Trigger: ACCAGGCTGGCCTTGAACTCAGAGATTCACCTGCTT...TTCTGACAAGGAGGGCCAGTTGTGCATCAGGTGGACTGAGCACCCAGCTGTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
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| 3UTR-3UTR TCA 90 bp | ATGACAGCTGGGTGCTCAGTCCACCTGATGCACAACTGGCCCTCCTTGTCAGAAGGAGGCAAAAGCAGGTaGATCTCTGAGTTCAAGGCC | + |
|
Preference number: 2 (lower is better) Translates to: MTAGCSVHLMHNWPSLSEGGKSR*ISEFKA Trigger: GGCCTTGAACTCAGAGATTCACCTGCTTTTGCCTCC...TTCTGACAAGGAGGGCCAGTTGTGCATCAGGTGGACTGAGCACCCAGCTGTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| 3UTR-3UTR TCA 90 bp | GTCAGCACTTCCACAAACCGTGGACAAAGCACAGGCCCAACCCTGAGGACCTGCTTGTGGCCAAAGCCTTaGGTACTTCTGTACCAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: VSTSTNRGQSTGPTLRTCLWPKP*VLLYQE Trigger: TTCCTGGTACAGAAGTACTCAAGGCTTTGGCCACAA...GCAGGTCCTCAGGGTTGGGCCTGTGCTTTGTCCACGGTTTGTGGAAGTGCTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| 3UTR-3UTR GCA 90 bp | CTAGGTCTTCCTCATGTGAGTCCTGAACAGCCTCACAGGGGTCCCAGAGGGCAGGTCACATGCCCAATTTaGCCTTCCTCCTATCCAATC | + |
|
Preference number: 2 (lower is better) Translates to: LGLPHVSPEQPHRGPRGQVTCPI*PSSYPI Trigger: GATTGGATAGGAGGAAGGGCAAATTGGGCATGTGAC...CTGCCCTCTGGGACCCCTGTGAGGCTGTTCAGGACTCACATGAGGAAGACCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
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| 3UTR-3UTR CCA 90 bp | CTAGGTCTTCCTCATGTGAGTCCTGAACAGCCTCACAGGGGTCCCAGAGGGCAGCTAGATCCCCTGGAATaGAGTGTGGAAGGTAACAGT | + |
|
Preference number: 2 (lower is better) Translates to: LGLPHVSPEQPHRGPRGQLDPLE*SVEGNS Trigger: ACTGTTACCTTCCACACTCCATTCCAGGGGATCTAG...CTGCCCTCTGGGACCCCTGTGAGGCTGTTCAGGACTCACATGAGGAAGACCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| 3UTR-3UTR CCA 90 bp | CTGGATAAGCATGCTCAGCCTAGAGGGAGGGGCCATTGCAGCTTCACGTCCTGCATTCTCTGGGGCTTCTaGAGAACAGGATCCGATGAA | + |
|
Preference number: 2 (lower is better) Translates to: LDKHAQPRGRGHCSFTSCILWGF*RTGSDE Trigger: TTCATCGGATCCTGTTCTCCAGAAGCCCCAGAGAAT...GCAGGACGTGAAGCTGCAATGGCCCCTCCCTCTAGGCTGAGCATGCTTATCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 |
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| 3UTR-3UTR TCA 90 bp | ATGACAGCTGGGTGCTCAGTCCACCTGATGCACAACTGGCCCTCCTTGTCAGAAAGGCTGGCCTTGAACTaGCAGATCTACCTTCATCTG | + |
|
Preference number: 2 (lower is better) Translates to: MTAGCSVHLMHNWPSLSERLALN*QIYLHL Trigger: CAGATGAAGGTAGATCTGTCAGTTCAAGGCCAGCCT...TTCTGACAAGGAGGGCCAGTTGTGCATCAGGTGGACTGAGCACCCAGCTGTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
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| 3UTR-3UTR GCA 90 bp | GCCTCCCTGTGTGTTGTTTGGGCTGGGGCCCTGGATAAGCATGCTCAGCCTAGACATCTGGGTCCCAAGTaGTGGGATTACATTGATTTG | + |
|
Preference number: 2 (lower is better) Translates to: ASLCVVWAGALDKHAQPRHLGPK*WDYIDL Trigger: CAAATCAATGTAATCCCAGCACTTGGGACCCAGATG...TCTAGGCTGAGCATGCTTATCCAGGGCCCCAGCCCAAACAACACACAGGGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
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| 3UTR-3UTR GCA 90 bp | GGTAAATGTCACGTTCCTTTTATTTCCATCTCTAAGTCATCTGCAGGGCAGGTTGGGCAGAGGGCAGTGTaGCGGGCTTGGCCTTACGGG | + |
|
Preference number: 2 (lower is better) Translates to: GKCHVPFISISKSSAGQVGQRAV*RAWPYG Trigger: CCCGTAAGGCCAAGCCCGGCACACTGCCCTCTGCCC...AACCTGCCCTGCAGATGACTTAGAGATGGAAATAAAAGGAACGTGACATTTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 |
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| 3UTR-3UTR CCA 90 bp | ATGACAGCTGGGTGCTCAGTCCACCTGATGCACAACTGGCCCTCCTTGTCAGAAGTCTTTCTAGCCACCTaGTCACATGCCCAATTTGCC | + |
|
Preference number: 2 (lower is better) Translates to: MTAGCSVHLMHNWPSLSEVFLAT*SHAQFA Trigger: GGCAAATTGGGCATGTGACCAGGTGGCTAGAAAGAC...TTCTGACAAGGAGGGCCAGTTGTGCATCAGGTGGACTGAGCACCCAGCTGTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
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| 3UTR-3UTR CCA 90 bp | GGTAAATGTCACGTTCCTTTTATTTCCATCTCTAAGTCATCTGCAGGGCAGGTTAGCCTGCAGGTGGGCTaGAGGCTGCCCAGCCAGCCT | + |
|
Preference number: 2 (lower is better) Translates to: GKCHVPFISISKSSAGQVSLQVG*RLPSQP Trigger: AGGCTGGCTGGGCAGCCTCCAGCCCACCTGCAGGCT...AACCTGCCCTGCAGATGACTTAGAGATGGAAATAAAAGGAACGTGACATTTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 |
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| 3UTR-3UTR CCA 90 bp | TGTGAGGTCAGTGATGTTAGTGTGGGTGACCCGGTCCTGGGACAACGCATCTGCATAAGACAGAGGCCATaGCAAAGACTCCAACACCAG | + |
|
Preference number: 2 (lower is better) Translates to: CEVSDVSVGDPVLGQRICIRQRP*QRLQHQ Trigger: CTGGTGTTGGAGTCTTTGCCATGGCCTCTGTCTTAT...GCAGATGCGTTGTCCCAGGACCGGGTCACCCACACTAACATCACTGACCTCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113552.9 |
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| 3UTR-3UTR TCA 90 bp | ATGACAGCTGGGTGCTCAGTCCACCTGATGCACAACTGGCCCTCCTTGTCAGAACTTGCCTCAACAGCTTaGAGATACTCTACCACCGAT | + |
|
Preference number: 2 (lower is better) Translates to: MTAGCSVHLMHNWPSLSELASTA*RYSTTD Trigger: ATCGGTGGTAGAGTATCTTCAAGCTGTTGAGGCAAG...TTCTGACAAGGAGGGCCAGTTGTGCATCAGGTGGACTGAGCACCCAGCTGTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
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| 3UTR-3UTR TCA 90 bp | TGGACATTCTACGTTCACTACAGATGCCACCAGAAGGCATTAATGGCCTCCCTGGCCTGGTCTACAGAGTaGGTTCAGGCTGTCCAGGAT | + |
|
Preference number: 2 (lower is better) Translates to: WTFYVHYRCHQKALMASLAWSTE*VQAVQD Trigger: ATCCTGGACAGCCTGAACTCACTCTGTAGACCAGGC...CAGGGAGGCCATTAATGCCTTCTGGTGGCATCTGTAGTGAACGTAGAATGTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
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| 3UTR-3UTR CCA 90 bp | AAAGGTGCGAAGGACCACCTCGGTACTCCCCCAAGCTCCACCACTCTAGGAGGGACACATTTTGTTGAATaGAATGGAAACGCCGATCAG | + |
|
Preference number: 2 (lower is better) Translates to: KGAKDHLGTPPSSTTLGGTHFVE*NGNADQ Trigger: CTGATCGGCGTTTCCATTCCATTCAACAAAATGTGT...CCCTCCTAGAGTGGTGGAGCTTGGGGGAGTACCGAGGTGGTCCTTCGCACCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
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| 3UTR CAA 90 bp | GTGCTCAGTCCACCTGATGCACAACTGGCCCTCCTTGTCAGAATTTaGTTAGTCACCAGGAAACCAGGGGTGACAGTTGACAAAGGCACA | + |
|
Preference number: 2 (lower is better) Translates to: VLSPPDAQLALLVRI*LVTRKPGVTVDKGT Trigger: TGTGCCTTTGTCAACTGTCACCCCTGGTTTCCTGGTGACTAACAAAATTCTGACAAGGAGGGCCAGTTGTGCATCAGGTGGACTGAGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| 3UTR-3UTR GCA 90 bp | GAGTGCTCTCTACTGAAAGCACTTTGTTTGGTTTTAATTCCACCTCCAGAGTCACCTGGGCTTGGCAGCTaGCTCTGCACATGCCCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: ECSLLKALCLVLIPPPESPGLGS*LCTCPV Trigger: CACTGGGCATGTGCAGAGGCAGCTGCCAAGCCCAGG...TGACTCTGGAGGTGGAATTAAAACCAAACAAAGTGCTTTCAGTAGAGAGCACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
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| 3UTR-3UTR CCA 90 bp | CTGGATAAGCATGCTCAGCCTAGAGGGAGGGGCCATTGCAGCTTCACGTCCTGCAAGGCTGGATATGGCTaGATGTTTTCTCATTTCCAT | + |
|
Preference number: 2 (lower is better) Translates to: LDKHAQPRGRGHCSFTSCKAGYG*MFSHFH Trigger: ATGGAAATGAGAAAACATCCAGCCATATCCAGCCTT...GCAGGACGTGAAGCTGCAATGGCCCCTCCCTCTAGGCTGAGCATGCTTATCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
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| 3UTR CAA 90 bp | ATGAATCGCTCAAGGAGTGCACCATCCTGGGCCTCTTTTGGTTGTTaGGGACACTCAGACAAGAAATGGGTAACACAGGAAACCCGAGCT | + |
|
Preference number: 2 (lower is better) Translates to: MNRSRSAPSWASFGC*GHSDKKWVTQETRA Trigger: AGCTCGGGTTTCCTGTGTTACCCATTTCTTGTCTGAGTGTCCCAAACAACCAAAAGAGGCCCAGGATGGTGCACTCCTTGAGCGATTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
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| 3UTR-3UTR TCA 90 bp | GTCAGCACTTCCACAAACCGTGGACAAAGCACAGGCCCAACCCTGAGGACCTGCGAAAAGTATTTGGCTTaGAAAGTCCTCAGTACTAGA | + |
|
Preference number: 2 (lower is better) Translates to: VSTSTNRGQSTGPTLRTCEKYLA*KVLSTR Trigger: TCTAGTACTGAGGACTTTTCAAGCCAAATACTTTTC...GCAGGTCCTCAGGGTTGGGCCTGTGCTTTGTCCACGGTTTGTGGAAGTGCTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
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| 3UTR-3UTR CCA 90 bp | TGGACATTCTACGTTCACTACAGATGCCACCAGAAGGCATTAATGGCCTCCCTGACTGGCCCCAATGCATaGATGTCAGCACTTCCACAA | + |
|
Preference number: 2 (lower is better) Translates to: WTFYVHYRCHQKALMASLTGPNA*MSALPQ Trigger: TTGTGGAAGTGCTGACATCCATGCATTGGGGCCAGT...CAGGGAGGCCATTAATGCCTTCTGGTGGCATCTGTAGTGAACGTAGAATGTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 |
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| 3UTR CAA 90 bp | CAAAATGAATCGCTCAAGGAGTGCACCATCCTGGGCCTCTTTTGGTaGTTTGGGACACTCAGACAAGAAATGGGTAACACAGGAAACCCG | + |
|
Preference number: 2 (lower is better) Translates to: QNESLKECTILGLFW*FGTLRQEMGNTGNP Trigger: CGGGTTTCCTGTGTTACCCATTTCTTGTCTGAGTGTCCCAAACAACCAAAAGAGGCCCAGGATGGTGCACTCCTTGAGCGATTCATTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| 3UTR-3UTR GCA 90 bp | TGGACATTCTACGTTCACTACAGATGCCACCAGAAGGCATTAATGGCCTCCCTGAGGAGAGTCCTCAAATaGTACTTATGGGACTCCGCA | + |
|
Preference number: 2 (lower is better) Translates to: WTFYVHYRCHQKALMASLRRVLK*YLWDSA Trigger: TGCGGAGTCCCATAAGTAGCATTTGAGGACTCTCCT...CAGGGAGGCCATTAATGCCTTCTGGTGGCATCTGTAGTGAACGTAGAATGTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 |
||
| 3UTR-3UTR GCA 90 bp | GGTAAATGTCACGTTCCTTTTATTTCCATCTCTAAGTCATCTGCAGGGCAGGTTTGGTACCCTCCCCTCTaGTCTGAGGTGGTACCTCAC | + |
|
Preference number: 2 (lower is better) Translates to: GKCHVPFISISKSSAGQVWYPPL*SEVVPH Trigger: GTGAGGTACCACCTCAGAGCAGAGGGGAGGGTACCA...AACCTGCCCTGCAGATGACTTAGAGATGGAAATAAAAGGAACGTGACATTTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 |
||
| 3UTR-3UTR CCA 90 bp | GAGTGCTCTCTACTGAAAGCACTTTGTTTGGTTTTAATTCCACCTCCAGAGTCACCGCCTCCTGAGAGCTaGGATTATAGGCACGAGCCA | + |
|
Preference number: 2 (lower is better) Translates to: ECSLLKALCLVLIPPPESPPPES*DYRHEP Trigger: TGGCTCGTGCCTATAATCCCAGCTCTCAGGAGGCGG...TGACTCTGGAGGTGGAATTAAAACCAAACAAAGTGCTTTCAGTAGAGAGCACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| 3UTR-3UTR CCA 90 bp | TGGACATTCTACGTTCACTACAGATGCCACCAGAAGGCATTAATGGCCTCCCTGCACCTGATGCACAACTaGCCCTCCTTGTCAGAATTT | + |
|
Preference number: 2 (lower is better) Translates to: WTFYVHYRCHQKALMASLHLMHN*PSLSEF Trigger: AAATTCTGACAAGGAGGGCCAGTTGTGCATCAGGTG...CAGGGAGGCCATTAATGCCTTCTGGTGGCATCTGTAGTGAACGTAGAATGTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 |
||
| 3UTR-3UTR TCA 90 bp | GGTAAATGTCACGTTCCTTTTATTTCCATCTCTAAGTCATCTGCAGGGCAGGTTCCAGGAAACCAGGGGTaGCAGTTGACAAAGGCACAG | + |
|
Preference number: 2 (lower is better) Translates to: GKCHVPFISISKSSAGQVPGNQG*QLTKAQ Trigger: CTGTGCCTTTGTCAACTGTCACCCCTGGTTTCCTGG...AACCTGCCCTGCAGATGACTTAGAGATGGAAATAAAAGGAACGTGACATTTACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 |
||
| 3UTR-3UTR GCA 90 bp | GGTAAATGTCACGTTCCTTTTATTTCCATCTCTAAGTCATCTGCAGGGCAGGTTGCACAGTGTGAGATGTaGAAGGAGTGGCCAGGCGAT | + |
|
Preference number: 2 (lower is better) Translates to: GKCHVPFISISKSSAGQVAQCEM*KEWPGD Trigger: ATCGCCTGGCCACTCCTTGCACATCTCACACTGTGC...AACCTGCCCTGCAGATGACTTAGAGATGGAAATAAAAGGAACGTGACATTTACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 |
||
| 3UTR-3UTR TCA 90 bp | GGTAAATGTCACGTTCCTTTTATTTCCATCTCTAAGTCATCTGCAGGGCAGGTTAAGCCCAGGCTAGCCTaGAACTCACTTGGATGCTCT | + |
|
Preference number: 2 (lower is better) Translates to: GKCHVPFISISKSSAGQVKPRLA*NSLGCS Trigger: AGAGCATCCAAGTGAGTTTCAGGCTAGCCTGGGCTT...AACCTGCCCTGCAGATGACTTAGAGATGGAAATAAAAGGAACGTGACATTTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| 3UTR-3UTR CCA 90 bp | CTCTCCATTTTACCTTTGTGGCAAGTCTTTCCTTGTCCTTCATGCATTAATGAGATTCAGTCCTGGGCTTaGCAGCTGCCTCTGCACATG | + |
|
Preference number: 2 (lower is better) Translates to: LSILPLWQVFPCPSCINEIQSWA*QLPLHM Trigger: CATGTGCAGAGGCAGCTGCCAAGCCCAGGACTGAAT...CTCATTAATGCATGAAGGACAAGGAAAGACTTGCCACAAAGGTAAAATGGAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| 3UTR-3UTR CCA 90 bp | AAATGTCACGTTCCTTTTATTTCCATCTCTAAGTCATCTGCAGGGCAGGTTCTTATTAAACAGGTCTGGTaGGCTGGGTCAGCTCGAGAC | + |
|
Preference number: 2 (lower is better) Translates to: KCHVPFISISKSSAGQVLIKQVW*AGSARD Trigger: GTCTCGAGCTGACCCAGCCCACCAGACCTGTTTAAT...AAGAACCTGCCCTGCAGATGACTTAGAGATGGAAATAAAAGGAACGTGACATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| 3UTR-3UTR CCA 90 bp | GGTAAATGTCACGTTCCTTTTATTTCCATCTCTAAGTCATCTGCAGGGCAGGTTCTAGATCCCCTGGAATaGAGTGTGGAAGGTAACAGT | + |
|
Preference number: 2 (lower is better) Translates to: GKCHVPFISISKSSAGQVLDPLE*SVEGNS Trigger: ACTGTTACCTTCCACACTCCATTCCAGGGGATCTAG...AACCTGCCCTGCAGATGACTTAGAGATGGAAATAAAAGGAACGTGACATTTACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 |
||
| 3UTR CAA 90 bp | TCCCCTGACACACATCTCCAGTCTCCCTTTTTAAACAGCAAACTATaGGAAGAAATGTCTGTGTTCGCCACTGAGGAGATAGAAACTACA | + |
|
Preference number: 2 (lower is better) Translates to: SPDTHLQSPFLNSKL*EEMSVFATEEIETT Trigger: TGTAGTTTCTATCTCCTCAGTGGCGAACACAGACATTTCTTCCAATAGTTTGCTGTTTAAAAAGGGAGACTGGAGATGTGTGTCAGGGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| 3UTR-3UTR TCA 90 bp | GGTAAATGTCACGTTCCTTTTATTTCCATCTCTAAGTCATCTGCAGGGCAGGTTCTGTCTTTCATCCTCTaGCTTGATGCTAAGCTACCA | + |
|
Preference number: 2 (lower is better) Translates to: GKCHVPFISISKSSAGQVLSFIL*LDAKLP Trigger: TGGTAGCTTAGCATCAAGTCAGAGGATGAAAGACAG...AACCTGCCCTGCAGATGACTTAGAGATGGAAATAAAAGGAACGTGACATTTACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 |
||
| 3UTR-3UTR TCA 90 bp | TCTGGTTTTGTAAGACTTCCCTGTCTTTCATCCTCTGACTTGATGCTAAGCTACGATGGAGCCAGGAGATaGATGTCAAGTCAAAATGAA | + |
|
Preference number: 2 (lower is better) Translates to: SGFVRLPCLSSSDLMLSYDGARR*MSSQNE Trigger: TTCATTTTGACTTGACATTCATCTCCTGGCTCCATC...GTAGCTTAGCATCAAGTCAGAGGATGAAAGACAGGGAAGTCTTACAAAACCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| 3UTR-3UTR GCA 90 bp | AAATGTCACGTTCCTTTTATTTCCATCTCTAAGTCATCTGCAGGGCAGGTTCTTGCTGCTAAGCAAGCTTaGCTCAACAGCTTGAAGATA | + |
|
Preference number: 2 (lower is better) Translates to: KCHVPFISISKSSAGQVLAAKQA*LNSLKI Trigger: TATCTTCAAGCTGTTGAGGCAAGCTTGCTTAGCAGC...AAGAACCTGCCCTGCAGATGACTTAGAGATGGAAATAAAAGGAACGTGACATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| 3UTR CAA 90 bp | TTTAAAGGTCATCTGAAGAAGACTGGCAGCCTCTCCATTTTACCTTaGTGGCAAGTCTTTCCTTGTCCTTCATGCATTAATGAGATCTGT | + |
|
Preference number: 2 (lower is better) Translates to: FKGHLKKTGSLSILP*WQVFPCPSCINEIC Trigger: ACAGATCTCATTAATGCATGAAGGACAAGGAAAGACTTGCCACAAAGGTAAAATGGAGAGGCTGCCAGTCTTCTTCAGATGACCTTTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| 3UTR CAA 90 bp | GCACGAGCCACCACCATACATCATATTTTAAATTTACACATTTTGTaGAATGGAATGGAAACGCCGATCAGATTTCAAACGACACAGATG | + |
|
Preference number: 2 (lower is better) Translates to: ARATTIHHILNLHIL*NGMETPIRFQTTQM Trigger: CATCTGTGTCGTTTGAAATCTGATCGGCGTTTCCATTCCATTCAACAAAATGTGTAAATTTAAAATATGATGTATGGTGGTGGCTCGTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073879.12 ENSMUST00000128500.8 |
||
| 3UTR-3UTR TCA 90 bp | AAATGTCACGTTCCTTTTATTTCCATCTCTAAGTCATCTGCAGGGCAGGTTCTTATTTACACATTTTGTTaGATGGAATGGAAACGCCGA | + |
|
Preference number: 2 (lower is better) Translates to: KCHVPFISISKSSAGQVLIYTFC*MEWKRR Trigger: TCGGCGTTTCCATTCCATTCAACAAAATGTGTAAAT...AAGAACCTGCCCTGCAGATGACTTAGAGATGGAAATAAAAGGAACGTGACATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| 3UTR TCA 72 bp | GTGCTGGAGGCCTGTGGGGACAAGCGGGCTGGACGATaGTGGCTCCCTCCCGGGAGGCTCTCGGGGGACTCT | + |
|
Preference number: 3 (lower is better) Translates to: VLEACGDKRAGR*WLPPGRLSGDS Trigger: AGAGTCCCCCGAGAGCCTCCCGGGAGGGAGCCATCATCGTCCAGCCCGCTTGTCCCCACAGGCCTCCAGCAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| 3UTR CCA 72 bp | GGCTGCCCAGCCAGCCTGAGTGGTGCTGGAGGCCTGTaGGGACAAGCGGGCTGGACGATGATGGCTCCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: GCPASLSGAGGL*GQAGWTMMAPS Trigger: GGAGGGAGCCATCATCGTCCAGCCCGCTTGTCCCCACAGGCCTCCAGCACCACTCAGGCTGGCTGGGCAGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| 3UTR CCA 72 bp | GTGAGATGTGCAAGGAGTGGCCAGGCGATGAGCAGGTaGACTGGGAGCCCGGAAGGAGCAGGGACACAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: VRCARSGQAMSR*TGSPEGAGTQG Trigger: GCCCTGTGTCCCTGCTCCTTCCGGGCTCCCAGTCCACCTGCTCATCGCCTGGCCACTCCTTGCACATCTCAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| 3UTR CCA 72 bp | CACAGGGCACATGCCCAGCTGTCTTGGTGGCCTGGGTaGGAAGGGAGCAGAGTAAAGTGGACAGCCCCCGTG | + |
|
Preference number: 3 (lower is better) Translates to: HRAHAQLSWWPG*EGSRVKWTAPV Trigger: CACGGGGGCTGTCCACTTTACTCTGCTCCCTTCCCACCCAGGCCACCAAGACAGCTGGGCATGTGCCCTGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| 3UTR CCA 72 bp | ATGTGCAAGGAGTGGCCAGGCGATGAGCAGGTGGACTaGGAGCCCGGAAGGAGCAGGGACACAGGGCACATG | + |
|
Preference number: 3 (lower is better) Translates to: MCKEWPGDEQVD*EPGRSRDTGHM Trigger: CATGTGCCCTGTGTCCCTGCTCCTTCCGGGCTCCCAGTCCACCTGCTCATCGCCTGGCCACTCCTTGCACAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| 3UTR-3UTR CAA 90 bp | AGGCTCTCGGGGGACTCTGGCCATGTGCACCACGCCTTTAGGAACCTGCGGCACCATTCAGTCCTGGGCTaGGCAGCTGCCTCTGCACAT | + |
|
Preference number: 3 (lower is better) Translates to: RLSGDSGHVHHAFRNLRHHSVLG*AAASAH Trigger: ATGTGCAGAGGCAGCTGCCAAGCCCAGGACTGAATG...GTGCCGCAGGTTCCTAAAGGCGTGGTGCACATGGCCAGAGTCCCCCGAGAGCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| 3UTR TCA 72 bp | TCTGGTGGGCTGGGTCAGCTCGAGACTGCACTAGTCTaGGGTGTGGCTGCTGGGGCTTCAGGAAGGCCATGG | + |
|
Preference number: 3 (lower is better) Translates to: SGGLGQLETALV*GVAAGASGRPW Trigger: CCATGGCCTTCCTGAAGCCCCAGCAGCCACACCTCAGACTAGTGCAGTCTCGAGCTGACCCAGCCCACCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| 3UTR-3UTR CAA 90 bp | AGGCTCTCGGGGGACTCTGGCCATGTGCACCACGCCTTTAGGAACCTGCGGCACTGGCTCTTGATGGCCTaGAGGTGGGCTGTCATGATG | + |
|
Preference number: 3 (lower is better) Translates to: RLSGDSGHVHHAFRNLRHWLLMA*RWAVMM Trigger: CATCATGACAGCCCACCTCAAGGCCATCAAGAGCCA...GTGCCGCAGGTTCCTAAAGGCGTGGTGCACATGGCCAGAGTCCCCCGAGAGCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| 3UTR TCA 72 bp | TGCGGTCCACAGAGGGGGCGGAAAGGAGAGGGTCCGTaGGTACGCGACAGGACAGCAGAAGATCATGACCCA | + |
|
Preference number: 3 (lower is better) Translates to: CGPQRGRKGEGP*VRDRTAEDHDP Trigger: TGGGTCATGATCTTCTGCTGTCCTGTCGCGTACTCACGGACCCTCTCCTTTCCGCCCCCTCTGTGGACCGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113552.9 |
||
| 3UTR CCA 72 bp | AAGCAGCAGGTGAGAGAGAGGCAGGCGGTTTGCCGCTaGCAAACTGCTTGCCTTGTGGAGAAGGGAGGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: KQQVRERQAVCR*QTACLVEKGGA Trigger: AGCCCCTCCCTTCTCCACAAGGCAAGCAGTTTGCCAGCGGCAAACCGCCTGCCTCTCTCTCACCTGCTGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| 3UTR GCA 72 bp | CACAGCCAAGTTGGACAAGCGAACCCAGGCACAAGATaGCCCCAGTTCCCCGAGTGTCTGAGTCGCTTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: HSQVGQANPGTR*PQFPECLSRLL Trigger: GAGCAAGCGACTCAGACACTCGGGGAACTGGGGGCATCTTGTGCCTGGGTTCGCTTGTCCAACTTGGCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073879.12 ENSMUST00000128500.8 |
||
| 3UTR GCA 72 bp | GGCAGGGTGTGGAAGAGGCTAAGTGGGGGCGGCTCCTaGATGGCTGCTAACCTCAGATATGGTCCTCAGCTA | + |
|
Preference number: 3 (lower is better) Translates to: GRVWKRLSGGGS*MAANLRYGPQL Trigger: TAGCTGAGGACCATATCTGAGGTTAGCAGCCATGCAGGAGCCGCCCCCACTTAGCCTCTTCCACACCCTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| 3UTR CCA 72 bp | TCAGCTCGAGACTGCACTAGTCTGAGGTGTGGCTGCTaGGGCTTCAGGAAGGCCATGGGGACCTCTTTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: SARDCTSLRCGC*GFRKAMGTSLC Trigger: GCACAAAGAGGTCCCCATGGCCTTCCTGAAGCCCCAGCAGCCACACCTCAGACTAGTGCAGTCTCGAGCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| 3UTR CCA 72 bp | GCCCCAATGCATGGATGTCAGCACTTCCACAAACCGTaGACAAAGCACAGGCCCAACCCTGAGGACCTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: APMHGCQHFHKP*TKHRPNPEDLP Trigger: GGGCAGGTCCTCAGGGTTGGGCCTGTGCTTTGTCCACGGTTTGTGGAAGTGCTGACATCCATGCATTGGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| 3UTR-3UTR CAA 90 bp | AAAGGTGCGAAGGACCACCTCGGTACTCCCCCAAGCTCCACCACTCTAGGAGGGCTGTACACAGCCAAGTaGGACAAGCGAACCCAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: KGAKDHLGTPPSSTTLGGLYTAK*DKRTQA Trigger: TGCCTGGGTTCGCTTGTCCAACTTGGCTGTGTACAG...CCCTCCTAGAGTGGTGGAGCTTGGGGGAGTACCGAGGTGGTCCTTCGCACCTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| 3UTR CCA 72 bp | CTGACGATGAGTCCCAAGAGACGCATGGATGACAGCTaGGTGCTCAGTCCACCTGATGCACAACTGGCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: LTMSPKRRMDDS*VLSPPDAQLAL Trigger: GAGGGCCAGTTGTGCATCAGGTGGACTGAGCACCCAGCTGTCATCCATGCGTCTCTTGGGACTCATCGTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| 3UTR-3UTR CAA 90 bp | CTAGGTCTTCCTCATGTGAGTCCTGAACAGCCTCACAGGGGTCCCAGAGGGCAGGGCTACGTCTTCTGTTaGGAGACAGGCTCTCAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: LGLPHVSPEQPHRGPRGQGYVFC*ETGSQV Trigger: TACCTGAGAGCCTGTCTCCAAACAGAAGACGTAGCC...CTGCCCTCTGGGACCCCTGTGAGGCTGTTCAGGACTCACATGAGGAAGACCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| 3UTR-3UTR CAA 90 bp | GCCTCCCTGTGTGTTGTTTGGGCTGGGGCCCTGGATAAGCATGCTCAGCCTAGAAATCCTTGCTTGCTCTaGAAACCCAAAGCCAGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: ASLCVVWAGALDKHAQPRNPCLL*KPKARP Trigger: GGGCCTGGCTTTGGGTTTCAAGAGCAAGCAAGGATT...TCTAGGCTGAGCATGCTTATCCAGGGCCCCAGCCCAAACAACACACAGGGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 |
||
| 3UTR TCA 72 bp | GAAACTCACTTGGATGCTCTGAAGCCCAGGCTAGCCTaGAACTCACTTGGCTACTCCTGGCTCCGCCTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: ETHLDALKPRLA*NSLGYSWLRLL Trigger: CAGGAGGCGGAGCCAGGAGTAGCCAAGTGAGTTTCAGGCTAGCCTGGGCTTCAGAGCATCCAAGTGAGTTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| 3UTR TCA 72 bp | TGGGGCACCCTTCACAGGGGCTTGTGGCCAAAGCCTTaGGTACTTCTGTACCAGGAAAGGAGAGAGTGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: WGTLHRGLWPKP*VLLYQERREWL Trigger: GAGCCACTCTCTCCTTTCCTGGTACAGAAGTACTCAAGGCTTTGGCCACAAGCCCCTGTGAAGGGTGCCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| 3UTR GCA 72 bp | GGTGAGAGAGAGGCAGGCGGTTTGCCGCTGGCAAACTaGTTGCCTTGTGGAGAAGGGAGGGGCTTAAGTAAT | + |
|
Preference number: 3 (lower is better) Translates to: GEREAGGLPLAN*LPCGEGRGLSN Trigger: ATTACTTAAGCCCCTCCCTTCTCCACAAGGCAAGCAGTTTGCCAGCGGCAAACCGCCTGCCTCTCTCTCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| 3UTR GCA 72 bp | ACTTCTGTACCAGGAAAGGAGAGAGTGGCTCAAAGGTaGGAAGGACCACCTCGGTACTCCCCCAAGCTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: TSVPGKERVAQR*EGPPRYSPKLH Trigger: GTGGAGCTTGGGGGAGTACCGAGGTGGTCCTTCGCACCTTTGAGCCACTCTCTCCTTTCCTGGTACAGAAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| 3UTR GCA 72 bp | GAGGAGGCGGGGCCAAGAAAGCCTGAAGCTAATCCTTaGTTGCTCTTGAAACCCAAAGCCAGGCCCACCTTG | + |
|
Preference number: 3 (lower is better) Translates to: EEAGPRKPEANP*LLLKPKARPTL Trigger: CAAGGTGGGCCTGGCTTTGGGTTTCAAGAGCAAGCAAGGATTAGCTTCAGGCTTTCTTGGCCCCGCCTCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| 3UTR GCA 72 bp | GACCTGACAGCTCTGAGGGCCTTCCCAACAGTGCCCTaGCCTCAAGGCTTAGAATTAGCACGCACACACACA | + |
|
Preference number: 3 (lower is better) Translates to: DLTALRAFPTVP*PQGLELARTHT Trigger: TGTGTGTGTGCGTGCTAATTCTAAGCCTTGAGGGCAGGGCACTGTTGGGAAGGCCCTCAGAGCTGTCAGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 |
||
| 3UTR TCA 72 bp | ATCCCAGCACGGAGGAGGCAAAAGCAGGTGAATCTCTaGGTTCAAGGCCAGCCTGGTCTACAGGGGGAATTC | + |
|
Preference number: 3 (lower is better) Translates to: IPARRRQKQVNL*VQGQPGLQGEF Trigger: GAATTCCCCCTGTAGACCAGGCTGGCCTTGAACTCAGAGATTCACCTGCTTTTGCCTCCTCCGTGCTGGGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| 3UTR GCA 72 bp | CTTACTCAGAGCCCAGGGGTTTACAATAAAGTCAAGTaGGCAGCAGCCAGCCGGGGACCTAGCTACAGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: LTQSPGVYNKVK*AAASRGPSYSA Trigger: TGCACTGTAGCTAGGTCCCCGGCTGGCTGCTGCGCACTTGACTTTATTGTAAACCCCTGGGCTCTGAGTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| 3UTR GCA 72 bp | CCCAACTTGCTGAAAGTCAGAGGTTCTGGAGTTAGATaGCTGGTAACCTGCTGGAGCGAAACTGCCTGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: PNLLKVRGSGVR*LVTCWSETAWA Trigger: GGCCCAGGCAGTTTCGCTCCAGCAGGTTACCAGGCATCTAACTCCAGAACCTCTGACTTTCAGCAAGTTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| 3UTR GCA 72 bp | ATATCGATGCCACGGTACAAAAGAAATCATGGAGGATaGGGTCCACAGAGGGGGCGGAAAGGAGAGGGTCCG | + |
|
Preference number: 3 (lower is better) Translates to: ISMPRYKRNHGG*GPQRGRKGEGP Trigger: CGGACCCTCTCCTTTCCGCCCCCTCTGTGGACCGCATCCTCCATGATTTCTTTTGTACCGTGGCATCGATAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113552.9 |
||
| 3UTR CCA 72 bp | GGGGCTTCTGGAGAACAGGATCCGATGAAGAAGCAGTaGCCAGAGCCATTGGAGGGACTACAAGAGGCACAA | + |
|
Preference number: 3 (lower is better) Translates to: GASGEQDPMKKQ*PEPLEGLQEAQ Trigger: TTGTGCCTCTTGTAGTCCCTCCAATGGCTCTGGCCACTGCTTCTTCATCGGATCCTGTTCTCCAGAAGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| 3UTR CCA 72 bp | GTCAGAGGTTCTGGAGTTAGATGCCTGGTAACCTGCTaGAGCGAAACTGCCTGGGCCACAGGTCAGACTAAC | + |
|
Preference number: 3 (lower is better) Translates to: VRGSGVRCLVTC*SETAWATGQTN Trigger: GTTAGTCTGACCTGTGGCCCAGGCAGTTTCGCTCCAGCAGGTTACCAGGCATCTAACTCCAGAACCTCTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| 3UTR CCA 72 bp | CACCAGAAGGCATTAATGGCCTCCCTGTGTGTTGTTTaGGCTGGGGCCCTGGATAAGCATGCTCAGCCTAGA | + |
|
Preference number: 3 (lower is better) Translates to: HQKALMASLCVV*AGALDKHAQPR Trigger: TCTAGGCTGAGCATGCTTATCCAGGGCCCCAGCCCAAACAACACACAGGGAGGCCATTAATGCCTTCTGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 |
||
| 3UTR CCA 72 bp | GTGAGGTCAGTGATGTTAGTGTGGGTGACCCGGTCCTaGGACAACGCATCTGCAATAAGACAGAGGCCATGG | + |
|
Preference number: 3 (lower is better) Translates to: VRSVMLVWVTRS*DNASAIRQRPW Trigger: CCATGGCCTCTGTCTTATTGCAGATGCGTTGTCCCAGGACCGGGTCACCCACACTAACATCACTGACCTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113552.9 |
||
| 3UTR TCA 72 bp | ATCTCTGTGAGTCTGAGTCCGGCCTGGTCTACAGAGTaGGTTCAGGCTGTCCAGGATAGCCAGGGCTACATA | + |
|
Preference number: 3 (lower is better) Translates to: ISVSLSPAWSTE*VQAVQDSQGYI Trigger: TATGTAGCCCTGGCTATCCTGGACAGCCTGAACTCACTCTGTAGACCAGGCCGGACTCAGACTCACAGAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| 3UTR TCA 72 bp | GGCCAAGAAAGCCTGAAGCTAATCCTTGCTTGCTCTTaGAACCCAAAGCCAGGCCCACCTTGTCAGCTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: GQESLKLILACS*NPKPGPPCQLL Trigger: GAGCAGCTGACAAGGTGGGCCTGGCTTTGGGTTTCAAGAGCAAGCAAGGATTAGCTTCAGGCTTTCTTGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| 3UTR GCA 72 bp | AAAGTCAGAGGTTCTGGAGTTAGATGCCTGGTAACCTaGTGGAGCGAAACTGCCTGGGCCACAGGTCAGACT | + |
|
Preference number: 3 (lower is better) Translates to: KVRGSGVRCLVT*WSETAWATGQT Trigger: AGTCTGACCTGTGGCCCAGGCAGTTTCGCTCCAGCAGGTTACCAGGCATCTAACTCCAGAACCTCTGACTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| 3UTR GCA 72 bp | GTTAGTGTGGGTGACCCGGTCCTGGGACAACGCATCTaGAATAAGACAGAGGCCATGGCAAAGACTCCAACA | + |
|
Preference number: 3 (lower is better) Translates to: VSVGDPVLGQRI*NKTEAMAKTPT Trigger: TGTTGGAGTCTTTGCCATGGCCTCTGTCTTATTGCAGATGCGTTGTCCCAGGACCGGGTCACCCACACTAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113552.9 |
||
| 3UTR CCA 72 bp | GGAGAAGGGAGGGGCTTAAGTAATTGGTTACCACAGTaGCTCTGCCATGGGGAGCTTTCGAGGCTACGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: GEGRGLSNWLPQ*LCHGELSRLRL Trigger: AAGACGTAGCCTCGAAAGCTCCCCATGGCAGAGCCACTGTGGTAACCAATTACTTAAGCCCCTCCCTTCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| 3UTR CCA 72 bp | TGCTTGCCTTGTGGAGAAGGGAGGGGCTTAAGTAATTaGTTACCACAGTGGCTCTGCCATGGGGAGCTTTCG | + |
|
Preference number: 3 (lower is better) Translates to: CLPCGEGRGLSN*LPQWLCHGELS Trigger: CGAAAGCTCCCCATGGCAGAGCCACTGTGGTAACCAATTACTTAAGCCCCTCCCTTCTCCACAAGGCAAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| 3UTR TCA 72 bp | AAAAGGGAACATGTTGAGTCCATTGCTTGCAACGGCTaGCACACCAGGCTCTGTTCGCAGCAAAGCTGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: KREHVESIACNG*HTRLCSQQSCS Trigger: GGAGCAGCTTTGCTGCGAACAGAGCCTGGTGTGTCAGCCGTTGCAAGCAATGGACTCAACATGTTCCCTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| 3UTR TCA 72 bp | ATGTCCACGGCAGACCGACTTTCTCAGAGAACGGCCTaGAGACGCTCATCCACCATCCTTTCTGGATGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: MSTADRLSQRTA*RRSSTILSGCK Trigger: CTTACATCCAGAAAGGATGGTGGATGAGCGTCTTCAGGCCGTTCTCTGAGAAAGTCGGTCTGCCGTGGACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| 3UTR TCA 72 bp | GGGTCCGTGAGTACGCGACAGGACAGCAGAAGATCATaGCCCAAAGCTCATGCAGACAGTGACATGCAATCT | + |
|
Preference number: 3 (lower is better) Translates to: GSVSTRQDSRRS*PKAHADSDMQS Trigger: AGATTGCATGTCACTGTCTGCATGAGCTTTGGGTCATGATCTTCTGCTGTCCTGTCGCGTACTCACGGACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113552.9 |
||
| 3UTR GCA 72 bp | CTCAGACAAGAAATGGGTAACACAGGAAACCCGAGCTaGAACGTCAGGTTACTCAGTGTGGGCACCAGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: LRQEMGNTGNPS*NVRLLSVGTRR Trigger: TCTCCTGGTGCCCACACTGAGTAACCTGACGTTGCAGCTCGGGTTTCCTGTGTTACCCATTTCTTGTCTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| 3UTR GCA 72 bp | GAGGGCTTCTCCAGTCTTTCTAGCCACCTGGTCACATaGCCAATTTGCCCTTCCTCCTATCCAATCAGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: EGFSSLSSHLVT*PICPSSYPIRR Trigger: CCTTCTGATTGGATAGGAGGAAGGGCAAATTGGGCATGTGACCAGGTGGCTAGAAAGACTGGAGAAGCCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| 3UTR CCA 72 bp | CCGGTTCACCTAGCAGGCCGTTCACCAGCTCACTGCTaGACCTCTCTCTTTGAGATGTTTTGGGCTTTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: PVHLAGRSPAHC*TSLFEMFWALF Trigger: AAACAAAGCCCAAAACATCTCAAAGAGAGAGGTCCAGCAGTGAGCTGGTGAACGGCCTGCTAGGTGAACCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| 3UTR CCA 72 bp | CTTCAAAAGCGAGCTCCATCCATTCTCTGGGGCTTCTaGAGAACAGGATCCGATGAAGAAGCAGTGGCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: LQKRAPSILWGF*RTGSDEEAVAR Trigger: TCTGGCCACTGCTTCTTCATCGGATCCTGTTCTCCAGAAGCCCCAGAGAATGGATGGAGCTCGCTTTTGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| 3UTR-3UTR CAA 90 bp | CTGGATAAGCATGCTCAGCCTAGAGGGAGGGGCCATTGCAGCTTCACGTCCTGCCTCTCCATTTTACCTTaGTGGCAAGTCTTTCCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: LDKHAQPRGRGHCSFTSCLSILP*WQVFPC Trigger: ACAAGGAAAGACTTGCCACAAAGGTAAAATGGAGAG...GCAGGACGTGAAGCTGCAATGGCCCCTCCCTCTAGGCTGAGCATGCTTATCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 |
||
| 3UTR-3UTR CAA 90 bp | TGGACATTCTACGTTCACTACAGATGCCACCAGAAGGCATTAATGGCCTCCCTGAATCCTTGCTTGCTCTaGAAACCCAAAGCCAGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: WTFYVHYRCHQKALMASLNPCLL*KPKARP Trigger: GGGCCTGGCTTTGGGTTTCAAGAGCAAGCAAGGATT...CAGGGAGGCCATTAATGCCTTCTGGTGGCATCTGTAGTGAACGTAGAATGTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 |
||
| 3UTR TCA 72 bp | TTTTTACTGGGTCTTACTCTGAAGCCCAGGCTAGCCTaGAACTCACTTGGATGCTCTGAAGCCCAGGCTAGC | + |
|
Preference number: 3 (lower is better) Translates to: FLLGLTLKPRLA*NSLGCSEAQAS Trigger: GCTAGCCTGGGCTTCAGAGCATCCAAGTGAGTTTCAGGCTAGCCTGGGCTTCAGAGTAAGACCCAGTAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| 3UTR TCA 72 bp | CACCGATGGAGCCAGGAGATGAATGTCAAGTCAAAATaGATCGCTCAAGGAGTGCACCATCCTGGGCCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: HRWSQEMNVKSK*IAQGVHHPGPL Trigger: AAGAGGCCCAGGATGGTGCACTCCTTGAGCGATTCATTTTGACTTGACATTCATCTCCTGGCTCCATCGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| 3UTR TCA 72 bp | GGGACACAGGGACAGGCGCAGGCTTTAAAGGTCATCTaGAGAAGACTGGCAGCCTCTCCATTTTACCTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: GTQGQAQALKVI*RRLAASPFYLC Trigger: ACAAAGGTAAAATGGAGAGGCTGCCAGTCTTCTTCAGATGACCTTTAAAGCCTGCGCCTGTCCCTGTGTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| 3UTR GCA 72 bp | TCCAGTCTTTCTAGCCACCTGGTCACATGCCCAATTTaGCCTTCCTCCTATCCAATCAGAAGGCTCTTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: SSLSSHLVTCPI*PSSYPIRRLFR Trigger: CCTGAAGAGCCTTCTGATTGGATAGGAGGAAGGGCAAATTGGGCATGTGACCAGGTGGCTAGAAAGACTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| 3UTR CCA 72 bp | GAATCGCTCAAGGAGTGCACCATCCTGGGCCTCTTTTaGTTGTTTGGGACACTCAGACAAGAAATGGGTAAC | + |
|
Preference number: 3 (lower is better) Translates to: ESLKECTILGLF*LFGTLRQEMGN Trigger: GTTACCCATTTCTTGTCTGAGTGTCCCAAACAACCAAAAGAGGCCCAGGATGGTGCACTCCTTGAGCGATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| 3UTR CCA 72 bp | TGGATAAAGAGGGCTTCTCCAGTCTTTCTAGCCACCTaGTCACATGCCCAATTTGCCCTTCCTCCTATCCAA | + |
|
Preference number: 3 (lower is better) Translates to: WIKRASPVFLAT*SHAQFALPPIQ Trigger: TTGGATAGGAGGAAGGGCAAATTGGGCATGTGACCAGGTGGCTAGAAAGACTGGAGAAGCCCTCTTTATCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| 3UTR CCA 72 bp | AAAAGGAGGGGGAGATCACAGCCAAGAAGTGAGTTCTaGATAAAGAGGGCTTCTCCAGTCTTTCTAGCCACC | + |
|
Preference number: 3 (lower is better) Translates to: KRRGRSQPRSEF*IKRASPVFLAT Trigger: GGTGGCTAGAAAGACTGGAGAAGCCCTCTTTATCCAGAACTCACTTCTTGGCTGTGATCTCCCCCTCCTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| 3UTR TCA 72 bp | GCAAGACTCACTCGGAGAAAATGTGAGCTACAAAGCTaGTGTGTATTAAACAGGTCTGGTGGGCTGGGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: ARLTRRKCELQS*CVLNRSGGLGQ Trigger: CTGACCCAGCCCACCAGACCTGTTTAATACACATCAGCTTTGTAGCTCACATTTTCTCCGAGTGAGTCTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| 3UTR TCA 72 bp | GAACAGGAAAAGGAGGGGGAGATCACAGCCAAGAAGTaGGTTCTGGATAAAGAGGGCTTCTCCAGTCTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: EQEKEGEITAKK*VLDKEGFSSLS Trigger: AGAAAGACTGGAGAAGCCCTCTTTATCCAGAACTCACTTCTTGGCTGTGATCTCCCCCTCCTTTTCCTGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| 3UTR TCA 72 bp | GGGACAAATGTCTTCACATACCGAGCCACCTTCCCCTaGCACACATCTCCAGTCTCCCTTTTTAAACAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: GTNVFTYRATFP*HTSPVSLFKQQ Trigger: TTGCTGTTTAAAAAGGGAGACTGGAGATGTGTGTCAGGGGAAGGTGGCTCGGTATGTGAAGACATTTGTCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| 3UTR TCA 72 bp | CTCTGGTTTTGTAAGACTTCCCTGTCTTTCATCCTCTaGCTTGATGCTAAGCTACCAACTGCCCAGAGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: LWFCKTSLSFIL*LDAKLPTAQRE Trigger: CTCCCTCTGGGCAGTTGGTAGCTTAGCATCAAGTCAGAGGATGAAAGACAGGGAAGTCTTACAAAACCAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| 3UTR CCA 72 bp | CAAGTCAAAATGAATCGCTCAAGGAGTGCACCATCCTaGGCCTCTTTTGGTTGTTTGGGACACTCAGACAAG | + |
|
Preference number: 3 (lower is better) Translates to: QVKMNRSRSAPS*ASFGCLGHSDK Trigger: CTTGTCTGAGTGTCCCAAACAACCAAAAGAGGCCCAGGATGGTGCACTCCTTGAGCGATTCATTTTGACTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| 3UTR CCA 72 bp | ACCTCACAAAATGTCTGTAATACTGGCCCCAATGCATaGATGTCAGCACTTCCACAAACCGTGGACAAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: TSQNVCNTGPNA*MSALPQTVDKA Trigger: TGCTTTGTCCACGGTTTGTGGAAGTGCTGACATCCATGCATTGGGGCCAGTATTACAGACATTTTGTGAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| 3UTR-3UTR CAA 90 bp | TCTGGTTTTGTAAGACTTCCCTGTCTTTCATCCTCTGACTTGATGCTAAGCTACCTGGGCCTCTTTTGGTaGTTTGGGACACTCAGACAA | + |
|
Preference number: 3 (lower is better) Translates to: SGFVRLPCLSSSDLMLSYLGLFW*FGTLRQ Trigger: TTGTCTGAGTGTCCCAAACAACCAAAAGAGGCCCAG...GTAGCTTAGCATCAAGTCAGAGGATGAAAGACAGGGAAGTCTTACAAAACCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| 3UTR GCA 72 bp | GCTAACCTCAGATATGGTCCTCAGCTAAAAGAAGGCTaGAGGCAGCTCAGCTCTCTCCTTATTTACTTATTT | + |
|
Preference number: 3 (lower is better) Translates to: ANLRYGPQLKEG*RQLSSLLIYLF Trigger: AAATAAGTAAATAAGGAGAGAGCTGAGCTGCCTGCAGCCTTCTTTTAGCTGAGGACCATATCTGAGGTTAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| 3UTR GCA 72 bp | TTTAACTTCATGTGGACATTCTACGTTCACTACAGATaGCACCAGAAGGCATTAATGGCCTCCCTGTGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: FNFMWTFYVHYR*HQKALMASLCV Trigger: AACACACAGGGAGGCCATTAATGCCTTCTGGTGGCATCTGTAGTGAACGTAGAATGTCCACATGAAGTTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 |
||
| 3UTR TCA 72 bp | AAGTACTGTGACAGCAAGACTCACTCGGAGAAAATGTaGGCTACAAAGCTGATGTGTATTAAACAGGTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: KYCDSKTHSEKM*ATKLMCIKQVW Trigger: CCAGACCTGTTTAATACACATCAGCTTTGTAGCTCACATTTTCTCCGAGTGAGTCTTGCTGTCACAGTACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| 3UTR CCA 72 bp | TGGATGTTTTCTCATTTCCATCCATTTATTTACAACTaGCTCTTGATGGCCTTGAGGTGGGCTGTCATGATG | + |
|
Preference number: 3 (lower is better) Translates to: WMFSHFHPFIYN*LLMALRWAVMM Trigger: CATCATGACAGCCCACCTCAAGGCCATCAAGAGCCAGTTGTAAATAAATGGATGGAAATGAGAAAACATCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| 3UTR-3UTR CAA 90 bp | GGTAAATGTCACGTTCCTTTTATTTCCATCTCTAAGTCATCTGCAGGGCAGGTTCTCTCCATTTTACCTTaGTGGCAAGTCTTTCCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: GKCHVPFISISKSSAGQVLSILP*WQVFPC Trigger: ACAAGGAAAGACTTGCCACAAAGGTAAAATGGAGAG...AACCTGCCCTGCAGATGACTTAGAGATGGAAATAAAAGGAACGTGACATTTACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 |
||
| 3UTR TCA 72 bp | TATGAAATATTGTCTTTATCTTGGCCATCACGAGGCTaGGGCAGAGGAATAGGAATTGTGAGTTCAAGGCTA | + |
|
Preference number: 3 (lower is better) Translates to: YEILSLSWPSRG*GRGIGIVSSRL Trigger: TAGCCTTGAACTCACAATTCCTATTCCTCTGCCTCAGCCTCGTGATGGCCAAGATAAAGACAATATTTCATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| 3UTR GCA 72 bp | TCTAGGTTCCAAAGTGCAATATATACAAATATATCCTaGTGTGCAGGATCACAGACATGGTCAAACAGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: SRFQSAIYTNIS*CAGSQTWSNRK Trigger: CTTCCTGTTTGACCATGTCTGTGATCCTGCACAGCAGGATATATTTGTATATATTGCACTTTGGAACCTAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| CDS-3UTR CCA 90 bp | AGGGCAGTGTGCCGGGCTTGGCCTTACGGGGAGGAGGCGGGGCCAAGAAAGCCTGGAGAGGGGTTCCTTTaGCTGCTTGGGAGACTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RAVCRAWPYGEEAGPRKPGEGFL*LLGRLG Trigger: CCCCAGTCTCCCAAGCAGCCAAAGGAACCCCTCTCC...AGGCTTTCTTGGCCCCGCCTCCTCCCCGTAAGGCCAAGCCCGGCACACTGCCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000113559.10 ENSMUST00000113560.8 |
||
| CDS-3UTR TCA 90 bp | AGGGCAGTGTGCCGGGCTTGGCCTTACGGGGAGGAGGCGGGGCCAAGAAAGCCTTCCAAGTTGTCAAACTaGTCCCAGAGCTCAGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RAVCRAWPYGEEAGPRKPSKLSN*SQSSVP Trigger: GGGCACTGAGCTCTGGGATCAGTTTGACAACTTGGA...AGGCTTTCTTGGCCCCGCCTCCTCCCCGTAAGGCCAAGCCCGGCACACTGCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR TCA 90 bp | CCCGTGCCGTACACAGGCAGAGGGACTGGCGGAGCCACAGGAACATGCTGTGAACCAGGCACTTCCCGATaGTGGGTATCACCTGCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: PVPYTGRGTGGATGTCCEPGTSR*WVSPAG Trigger: ACCGGCAGGTGATACCCATCATCGGGAAGTGCCTGG...TTCACAGCATGTTCCTGTGGCTCCGCCAGTCCCTCTGCCTGTGTACGGCACGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR GCA 90 bp | GTCAGCACTTCCACAAACCGTGGACAAAGCACAGGCCCAACCCTGAGGACCTGCCTCTGCCGGCGTGCCTaGTCACTCCGAGCTGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: VSTSTNRGQSTGPTLRTCLCRRA*SLRAGS Trigger: ACTCCCAGCTCGGAGTGAGCAGGCACGCCGGCAGAG...GCAGGTCCTCAGGGTTGGGCCTGTGCTTTGTCCACGGTTTGTGGAAGTGCTGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR GCA 90 bp | AGGGCAGTGTGCCGGGCTTGGCCTTACGGGGAGGAGGCGGGGCCAAGAAAGCCTCCTCGTCTTCATTTCTaGGGATGCGAGTCCACCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RAVCRAWPYGEEAGPRKPPRLHF*GCESTH Trigger: ATGGGTGGACTCGCATCCGCAGAAATGAAGACGAGG...AGGCTTTCTTGGCCCCGCCTCCTCCCCGTAAGGCCAAGCCCGGCACACTGCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CCA 90 bp | AAAGGTGCGAAGGACCACCTCGGTACTCCCCCAAGCTCCACCACTCTAGGAGGGGAGACTGGGGGCCGTTaGGAACAGCAGAGGGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KGAKDHLGTPPSSTTLGGETGGR*EQQRVR Trigger: CCTCACCCTCTGCTGTTCCCAACGGCCCCCAGTCTC...CCCTCCTAGAGTGGTGGAGCTTGGGGGAGTACCGAGGTGGTCCTTCGCACCTTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000113559.10 ENSMUST00000113560.8 |
||
| CDS-3UTR GCA 90 bp | AGGGCAGTGTGCCGGGCTTGGCCTTACGGGGAGGAGGCGGGGCCAAGAAAGCCTCTGAGCTTGTTGTCGTaGCTTTTCCACATCCGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RAVCRAWPYGEEAGPRKPLSLLS*LFHIRL Trigger: AAGGCGGATGTGGAAAAGGCACGACAACAAGCTCAG...AGGCTTTCTTGGCCCCGCCTCCTCCCCGTAAGGCCAAGCCCGGCACACTGCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR GCA 90 bp | CCCGTGCCGTACACAGGCAGAGGGACTGGCGGAGCCACAGGAACATGCTGTGAACTGCCGGTCCACCTCTaGGTACGTCTTCATGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: PVPYTGRGTGGATGTCCELPVHL*VRLHGL Trigger: GAGTCCATGAAGACGTACGCAGAGGTGGACCGGCAG...TTCACAGCATGTTCCTGTGGCTCCGCCAGTCCCTCTGCCTGTGTACGGCACGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR GCA 90 bp | CTAGGTCTTCCTCATGTGAGTCCTGAACAGCCTCACAGGGGTCCCAGAGGGCAGGGGGCCAGGACCTTGTaGTCGCTCTCCTGGCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LGLPHVSPEQPHRGPRGQGARTL*SLSWLC Trigger: GCAAAGCCAGGAGAGCGAGCACAAGGTCCTGGCCCC...CTGCCCTCTGGGACCCCTGTGAGGCTGTTCAGGACTCACATGAGGAAGACCTAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR GCA 90 bp | GTCAGCACTTCCACAAACCGTGGACAAAGCACAGGCCCAACCCTGAGGACCTGCAGGGGTTCCTTTGGCTaGTTGGGAGACTGGGGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: VSTSTNRGQSTGPTLRTCRGSFG*LGDWGP Trigger: CGGCCCCCAGTCTCCCAAGCAGCCAAAGGAACCCCT...GCAGGTCCTCAGGGTTGGGCCTGTGCTTTGTCCACGGTTTGTGGAAGTGCTGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113559.10 ENSMUST00000113560.8 |
||
| CDS-3UTR CCA 90 bp | CCCGTGCCGTACACAGGCAGAGGGACTGGCGGAGCCACAGGAACATGCTGTGAAGCAGGTCCCTATGGCTaGAAGCGGCTCCTCATCATC | + |
|
Preference number: 4 (lower is better) Translates to: PVPYTGRGTGGATGTCCEAGPYG*KRLLII Trigger: GATGATGAGGAGCCGCTTCCAGCCATAGGGACCTGC...TTCACAGCATGTTCCTGTGGCTCCGCCAGTCCCTCTGCCTGTGTACGGCACGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| 3UTR CAA 72 bp | GCCCAGAGGGAGACGCCAACCTCCTCAAGCTCATACTaGTGGGGCACCCTTCACAGGGGCTTGTGGCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: AQRETPTSSSSY*WGTLHRGLWPK Trigger: CTTTGGCCACAAGCCCCTGTGAAGGGTGCCCCACAAGTATGAGCTTGAGGAGGTTGGCGTCTCCCTCTGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| 3UTR CAA 72 bp | CCTTGCTTGCTCTTGAAACCCAAAGCCAGGCCCACCTaGTCAGCTGCTCCCCCACCTTGGTACCCTCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PCLLLKPKARPT*SAAPPPWYPPL Trigger: GAGGGGAGGGTACCAAGGTGGGGGAGCAGCTGACAAGGTGGGCCTGGCTTTGGGTTTCAAGAGCAAGCAAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR GCA 90 bp | CCCCAGTTCCCCGAGTGTCTGAGTCGCTTGCTCTCTGCTGACCTCTTGAAGGCCCTGCCGGTCCACCTCTaGGTACGTCTTCATGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: PQFPECLSRLLSADLLKALPVHL*VRLHGL Trigger: GAGTCCATGAAGACGTACGCAGAGGTGGACCGGCAG...GGCCTTCAAGAGGTCAGCAGAGAGCAAGCGACTCAGACACTCGGGGAACTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
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| CDS-3UTR GCA 90 bp | GGGGCTTGTGGCCAAAGCCTTGAGTACTTCTGTACCAGGAAAGGAGAGAGTGGCCTCTGCCGGCGTGCCTaGTCACTCCGAGCTGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GACGQSLEYFCTRKGESGLCRRA*SLRAGS Trigger: ACTCCCAGCTCGGAGTGAGCAGGCACGCCGGCAGAG...GCCACTCTCTCCTTTCCTGGTACAGAAGTACTCAAGGCTTTGGCCACAAGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR GCA 90 bp | GGGGAGGAGGCGGGGCCAAGAAAGCCTGAAGCTAATCCTTGCTTGCTCTTGAAACTCTGCCGGCGTGCCTaGTCACTCCGAGCTGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GEEAGPRKPEANPCLLLKLCRRA*SLRAGS Trigger: ACTCCCAGCTCGGAGTGAGCAGGCACGCCGGCAGAG...TTTCAAGAGCAAGCAAGGATTAGCTTCAGGCTTTCTTGGCCCCGCCTCCTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| CDS-3UTR GCA 90 bp | CTGAGTCGCTTGCTCTCTGCTGACCTCTTGAAGGCCTGTAACAGCCACAGTGGTCTCTGCCGGCGTGCCTaGTCACTCCGAGCTGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LSRLLSADLLKACNSHSGLCRRA*SLRAGS Trigger: ACTCCCAGCTCGGAGTGAGCAGGCACGCCGGCAGAG...ACCACTGTGGCTGTTACAGGCCTTCAAGAGGTCAGCAGAGAGCAAGCGACTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073879.12 ENSMUST00000128500.8 |
||
| CDS-3UTR GCA 90 bp | CTAGCCGGTGGCAGTTCTGTACACAGCCAAGTTGGACAAGCGAACCCAGGCACAGGGGCCAGGACCTTGTaGTCGCTCTCCTGGCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LAGGSSVHSQVGQANPGTGARTL*SLSWLC Trigger: GCAAAGCCAGGAGAGCGAGCACAAGGTCCTGGCCCC...TGTGCCTGGGTTCGCTTGTCCAACTTGGCTGTGTACAGAACTGCCACCGGCTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073879.12 ENSMUST00000128500.8 |
||
| CDS-3UTR GCA 90 bp | CACCCGTGCCGTACACAGGCAGAGGGACTGGCGGAGCCACAGGAACATGCTGTGCTTCATTTCTGCGGATaGGAGTCCACCCATCGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: HPCRTQAEGLAEPQEHAVLHFCG*ESTHRL Trigger: AAGGCGATGGGTGGACTCGCATCCGCAGAAATGAAG...CACAGCATGTTCCTGTGGCTCCGCCAGTCCCTCTGCCTGTGTACGGCACGGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR GCA 90 bp | CACCCGTGCCGTACACAGGCAGAGGGACTGGCGGAGCCACAGGAACATGCTGTGCCTCGTCTTCATTTCTaGGGATGCGAGTCCACCCAT | + |
|
Preference number: 4 (lower is better) Translates to: HPCRTQAEGLAEPQEHAVPRLHF*GCESTH Trigger: ATGGGTGGACTCGCATCCGCAGAAATGAAGACGAGG...CACAGCATGTTCCTGTGGCTCCGCCAGTCCCTCTGCCTGTGTACGGCACGGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| CDS-3UTR CCA 90 bp | CTAGGTCTTCCTCATGTGAGTCCTGAACAGCCTCACAGGGGTCCCAGAGGGCAGGCTTCTGGTCCAGGCTaGCTGGGTCTCCCATCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LGLPHVSPEQPHRGPRGQASGPG*LGLPSE Trigger: CTCAGATGGGAGACCCAGCCAGCCTGGACCAGAAGC...CTGCCCTCTGGGACCCCTGTGAGGCTGTTCAGGACTCACATGAGGAAGACCTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CCA 90 bp | CTGGATAAGCATGCTCAGCCTAGAGGGAGGGGCCATTGCAGCTTCACGTCCTGCGCTTCTGGTCCAGGCTaGCTGGGTCTCCCATCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LDKHAQPRGRGHCSFTSCASGPG*LGLPSE Trigger: CTCAGATGGGAGACCCAGCCAGCCTGGACCAGAAGC...GCAGGACGTGAAGCTGCAATGGCCCCTCCCTCTAGGCTGAGCATGCTTATCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 |
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| CDS-3UTR CCA 90 bp | TGCGAAGGACCACCTCGGTACTCCCCCAAGCTCCACCACTCTAGGAGGGCAACAGCAGGTCCCTATGGCTaGAAGCGGCTCCTCATCATC | + |
|
Preference number: 4 (lower is better) Translates to: CEGPPRYSPKLHHSRRATAGPYG*KRLLII Trigger: GATGATGAGGAGCCGCTTCCAGCCATAGGGACCTGC...TGTTGCCCTCCTAGAGTGGTGGAGCTTGGGGGAGTACCGAGGTGGTCCTTCGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| CDS-3UTR CCA 90 bp | AGGGAAGGCCTGAGGCAGCAGCCTCTGGACATGAAGGACACATCTGACGATGAGGGCTGCTTGGGAGACTaGGGGCCGTTGGGAACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: REGLRQQPLDMKDTSDDEGCLGD*GPLGTA Trigger: TGCTGTTCCCAACGGCCCCCAGTCTCCCAAGCAGCC...CTCATCGTCAGATGTGTCCTTCATGTCCAGAGGCTGCTGCCTCAGGCCTTCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113559.10 ENSMUST00000113560.8 |
||
| CDS-3UTR GCA 90 bp | GTCAGGCTGGCAAGCTTGATTAGATGGGACTCGGTCCCCTTGCTCCCAGCAGTCCTGCCGGTCCACCTCTaGGTACGTCTTCATGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: VRLASLIRWDSVPLLPAVLPVHL*VRLHGL Trigger: GAGTCCATGAAGACGTACGCAGAGGTGGACCGGCAG...GACTGCTGGGAGCAAGGGGACCGAGTCCCATCTAATCAAGCTTGCCAGCCTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113552.9 |
||
| CDS-3UTR GCA 90 bp | AGGGCAGTGTGCCGGGCTTGGCCTTACGGGGAGGAGGCGGGGCCAAGAAAGCCTCAACTACGGAAATGGTaGCTTCGTTCTGACCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: RAVCRAWPYGEEAGPRKPQLRKW*LRSDLQ Trigger: TTGAAGGTCAGAACGAAGGCACCATTTCCGTAGTTG...AGGCTTTCTTGGCCCCGCCTCCTCCCCGTAAGGCCAAGCCCGGCACACTGCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CCA 90 bp | GTAACCTGCTGGAGCGAAACTGCCTGGGCCACAGGTCAGACTAACTGTGTCAGCGCTTCTGGTCCAGGCTaGCTGGGTCTCCCATCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VTCWSETAWATGQTNCVSASGPG*LGLPSE Trigger: CTCAGATGGGAGACCCAGCCAGCCTGGACCAGAAGC...GCTGACACAGTTAGTCTGACCTGTGGCCCAGGCAGTTTCGCTCCAGCAGGTTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| CDS-3UTR CCA 90 bp | CTGGATAAGCATGCTCAGCCTAGAGGGAGGGGCCATTGCAGCTTCACGTCCTGCACTTCGGTGAGCTTCTaGTCCAGGCTGGCTGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LDKHAQPRGRGHCSFTSCTSVSF*SRLAGS Trigger: AGACCCAGCCAGCCTGGACCAGAAGCTCACCGAAGT...GCAGGACGTGAAGCTGCAATGGCCCCTCCCTCTAGGCTGAGCATGCTTATCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 |
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| CDS-3UTR CCA 90 bp | CTAGGTCTTCCTCATGTGAGTCCTGAACAGCCTCACAGGGGTCCCAGAGGGCAGGCAGGTCCCTATGGCTaGAAGCGGCTCCTCATCATC | + |
|
Preference number: 4 (lower is better) Translates to: LGLPHVSPEQPHRGPRGQAGPYG*KRLLII Trigger: GATGATGAGGAGCCGCTTCCAGCCATAGGGACCTGC...CTGCCCTCTGGGACCCCTGTGAGGCTGTTCAGGACTCACATGAGGAAGACCTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| CDS-3UTR CCA 90 bp | GTCAGCACTTCCACAAACCGTGGACAAAGCACAGGCCCAACCCTGAGGACCTGCCCTTGCAGGTCCCTATaGCTGGAAGCGGCTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VSTSTNRGQSTGPTLRTCPCRSL*LEAAPH Trigger: ATGAGGAGCCGCTTCCAGCCATAGGGACCTGCAAGG...GCAGGTCCTCAGGGTTGGGCCTGTGCTTTGTCCACGGTTTGTGGAAGTGCTGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| CDS-3UTR CCA 90 bp | CTAGGTCTTCCTCATGTGAGTCCTGAACAGCCTCACAGGGGTCCCAGAGGGCAGCCTTGCAGGTCCCTATaGCTGGAAGCGGCTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LGLPHVSPEQPHRGPRGQPCRSL*LEAAPH Trigger: ATGAGGAGCCGCTTCCAGCCATAGGGACCTGCAAGG...CTGCCCTCTGGGACCCCTGTGAGGCTGTTCAGGACTCACATGAGGAAGACCTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| CDS-3UTR CCA 90 bp | GGGGAGGAGGCGGGGCCAAGAAAGCCTGAAGCTAATCCTTGCTTGCTCTTGAAAGAGACTGGGGGCCGTTaGGAACAGCAGAGGGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GEEAGPRKPEANPCLLLKETGGR*EQQRVR Trigger: CCTCACCCTCTGCTGTTCCCAACGGCCCCCAGTCTC...TTTCAAGAGCAAGCAAGGATTAGCTTCAGGCTTTCTTGGCCCCGCCTCCTCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000113559.10 ENSMUST00000113560.8 |
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| CDS-3UTR TCA 90 bp | ACCTTGTCAGCTGCTCCCCCACCTTGGTACCCTCCCCTCTGCTCTGAGGTGGTACCGCCTTGGTCACGTTaGTGTCAGCGTCCATTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TLSAAPPPWYPPLCSEVVPPWSR*CQRPFS Trigger: AGAAAATGGACGCTGACATCAACGTGACCAAGGCGG...TACCACCTCAGAGCAGAGGGGAGGGTACCAAGGTGGGGGAGCAGCTGACAAGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| CDS-3UTR TCA 90 bp | GGGGCTTGTGGCCAAAGCCTTGAGTACTTCTGTACCAGGAAAGGAGAGAGTGGCCCAGGCACTTCCCGATaGTGGGTATCACCTGCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: GACGQSLEYFCTRKGESGPGTSR*WVSPAG Trigger: ACCGGCAGGTGATACCCATCATCGGGAAGTGCCTGG...GCCACTCTCTCCTTTCCTGGTACAGAAGTACTCAAGGCTTTGGCCACAAGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| CDS-3UTR TCA 90 bp | ATGACAGCTGGGTGCTCAGTCCACCTGATGCACAACTGGCCCTCCTTGTCAGAACCAGGCACTTCCCGATaGTGGGTATCACCTGCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: MTAGCSVHLMHNWPSLSEPGTSR*WVSPAG Trigger: ACCGGCAGGTGATACCCATCATCGGGAAGTGCCTGG...TTCTGACAAGGAGGGCCAGTTGTGCATCAGGTGGACTGAGCACCCAGCTGTCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| CDS-3UTR TCA 90 bp | GTAACCTGCTGGAGCGAAACTGCCTGGGCCACAGGTCAGACTAACTGTGTCAGCCAGGCCTCAAACTTCTaGGCCTCCAGCCGCAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VTCWSETAWATGQTNCVSQASNF*ASSRSF Trigger: GAAACTGCGGCTGGAGGCTCAGAAGTTTGAGGCCTG...GCTGACACAGTTAGTCTGACCTGTGGCCCAGGCAGTTTCGCTCCAGCAGGTTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| CDS-3UTR TCA 90 bp | CAGTTCCCCGAGTGTCTGAGTCGCTTGCTCTCTGCTGACCTCTTGAAGGCCTGTCAGGCCTCAAACTTCTaGGCCTCCAGCCGCAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: QFPECLSRLLSADLLKACQASNF*ASSRSF Trigger: GAAACTGCGGCTGGAGGCTCAGAAGTTTGAGGCCTG...ACAGGCCTTCAAGAGGTCAGCAGAGAGCAAGCGACTCAGACACTCGGGGAACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073879.12 ENSMUST00000128500.8 |
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| CDS-3UTR GCA 90 bp | AGGGAAGGCCTGAGGCAGCAGCCTCTGGACATGAAGGACACATCTGACGATGAGCTGCCGGTCCACCTCTaGGTACGTCTTCATGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: REGLRQQPLDMKDTSDDELPVHL*VRLHGL Trigger: GAGTCCATGAAGACGTACGCAGAGGTGGACCGGCAG...CTCATCGTCAGATGTGTCCTTCATGTCCAGAGGCTGCTGCCTCAGGCCTTCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| CDS-3UTR GCA 90 bp | ACCTTGTCAGCTGCTCCCCCACCTTGGTACCCTCCCCTCTGCTCTGAGGTGGTACTTCATTTCTGCGGATaGGAGTCCACCCATCGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TLSAAPPPWYPPLCSEVVLHFCG*ESTHRL Trigger: AAGGCGATGGGTGGACTCGCATCCGCAGAAATGAAG...TACCACCTCAGAGCAGAGGGGAGGGTACCAAGGTGGGGGAGCAGCTGACAAGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| CDS-3UTR GCA 90 bp | AAAGGTGCGAAGGACCACCTCGGTACTCCCCCAAGCTCCACCACTCTAGGAGGGCTTCATTTCTGCGGATaGGAGTCCACCCATCGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KGAKDHLGTPPSSTTLGGLHFCG*ESTHRL Trigger: AAGGCGATGGGTGGACTCGCATCCGCAGAAATGAAG...CCCTCCTAGAGTGGTGGAGCTTGGGGGAGTACCGAGGTGGTCCTTCGCACCTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| CDS-3UTR CCA 90 bp | CAGTTGACAAAGGCACAGTGTGAGATGTGCAAGGAGTGGCCAGGCGATGAGCAGGCTTCTGGTCCAGGCTaGCTGGGTCTCCCATCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: QLTKAQCEMCKEWPGDEQASGPG*LGLPSE Trigger: CTCAGATGGGAGACCCAGCCAGCCTGGACCAGAAGC...CTGCTCATCGCCTGGCCACTCCTTGCACATCTCACACTGTGCCTTTGTCAACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| CDS-3UTR CCA 90 bp | TTGCTCTCTGCTGACCTCTTGAAGGCCTGTAACAGCCACAGTGGTGGGGAGAGAGCTTCTGGTCCAGGCTaGCTGGGTCTCCCATCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLSADLLKACNSHSGGERASGPG*LGLPSE Trigger: CTCAGATGGGAGACCCAGCCAGCCTGGACCAGAAGC...TCTCTCCCCACCACTGTGGCTGTTACAGGCCTTCAAGAGGTCAGCAGAGAGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073879.12 ENSMUST00000128500.8 |
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| CDS-3UTR CCA 90 bp | CTAGCCGGTGGCAGTTCTGTACACAGCCAAGTTGGACAAGCGAACCCAGGCACAACTTCGGTGAGCTTCTaGTCCAGGCTGGCTGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LAGGSSVHSQVGQANPGTTSVSF*SRLAGS Trigger: AGACCCAGCCAGCCTGGACCAGAAGCTCACCGAAGT...TGTGCCTGGGTTCGCTTGTCCAACTTGGCTGTGTACAGAACTGCCACCGGCTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073879.12 ENSMUST00000128500.8 |
||
| CDS-3UTR CCA 90 bp | GTAACCTGCTGGAGCGAAACTGCCTGGGCCACAGGTCAGACTAACTGTGTCAGCGCAGGTCCCTATGGCTaGAAGCGGCTCCTCATCATC | + |
|
Preference number: 4 (lower is better) Translates to: VTCWSETAWATGQTNCVSAGPYG*KRLLII Trigger: GATGATGAGGAGCCGCTTCCAGCCATAGGGACCTGC...GCTGACACAGTTAGTCTGACCTGTGGCCCAGGCAGTTTCGCTCCAGCAGGTTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CCA 90 bp | AGGGAAGGCCTGAGGCAGCAGCCTCTGGACATGAAGGACACATCTGACGATGAGCCTTGCAGGTCCCTATaGCTGGAAGCGGCTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: REGLRQQPLDMKDTSDDEPCRSL*LEAAPH Trigger: ATGAGGAGCCGCTTCCAGCCATAGGGACCTGCAAGG...CTCATCGTCAGATGTGTCCTTCATGTCCAGAGGCTGCTGCCTCAGGCCTTCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CCA 90 bp | AGTCGCTTGCTCTCTGCTGACCTCTTGAAGGCCTGTAACAGCCACAGTGGTGGGCCTTGCAGGTCCCTATaGCTGGAAGCGGCTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SRLLSADLLKACNSHSGGPCRSL*LEAAPH Trigger: ATGAGGAGCCGCTTCCAGCCATAGGGACCTGCAAGG...CCCACCACTGTGGCTGTTACAGGCCTTCAAGAGGTCAGCAGAGAGCAAGCGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073879.12 ENSMUST00000128500.8 |
||
| CDS-3UTR CCA 90 bp | CAGTTGACAAAGGCACAGTGTGAGATGTGCAAGGAGTGGCCAGGCGATGAGCAGGGAGAGGGGTTCCTTTaGCTGCTTGGGAGACTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QLTKAQCEMCKEWPGDEQGEGFL*LLGRLG Trigger: CCCCAGTCTCCCAAGCAGCCAAAGGAACCCCTCTCC...CTGCTCATCGCCTGGCCACTCCTTGCACATCTCACACTGTGCCTTTGTCAACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113559.10 ENSMUST00000113560.8 |
||
| 3UTR CAA 72 bp | CCCGAGTGTCTGAGTCGCTTGCTCTCTGCTGACCTCTaGAAGGCCTGTAACAGCCACAGTGGTGGGGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PECLSRLLSADL*KACNSHSGGER Trigger: TCTCTCCCCACCACTGTGGCTGTTACAGGCCTTCAAGAGGTCAGCAGAGAGCAAGCGACTCAGACACTCGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073879.12 ENSMUST00000128500.8 |
||
| CDS-3UTR TCA 90 bp | CTAGGTCTTCCTCATGTGAGTCCTGAACAGCCTCACAGGGGTCCCAGAGGGCAGTCCAAGTTGTCAAACTaGTCCCAGAGCTCAGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LGLPHVSPEQPHRGPRGQSKLSN*SQSSVP Trigger: GGGCACTGAGCTCTGGGATCAGTTTGACAACTTGGA...CTGCCCTCTGGGACCCCTGTGAGGCTGTTCAGGACTCACATGAGGAAGACCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR TCA 90 bp | GTCAGCACTTCCACAAACCGTGGACAAAGCACAGGCCCAACCCTGAGGACCTGCCCGCCTTGGTCACGTTaGTGTCAGCGTCCATTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VSTSTNRGQSTGPTLRTCPPWSR*CQRPFS Trigger: AGAAAATGGACGCTGACATCAACGTGACCAAGGCGG...GCAGGTCCTCAGGGTTGGGCCTGTGCTTTGTCCACGGTTTGTGGAAGTGCTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR TCA 90 bp | TGCCCCCAGTTCCCCGAGTGTCTGAGTCGCTTGCTCTCTGCTGACCTCTTGAAGCCGCCTTGGTCACGTTaGTGTCAGCGTCCATTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CPQFPECLSRLLSADLLKPPWSR*CQRPFS Trigger: AGAAAATGGACGCTGACATCAACGTGACCAAGGCGG...CTTCAAGAGGTCAGCAGAGAGCAAGCGACTCAGACACTCGGGGAACTGGGGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000073879.12 ENSMUST00000128500.8 |
||
| CDS-3UTR TCA 90 bp | CTGGATAAGCATGCTCAGCCTAGAGGGAGGGGCCATTGCAGCTTCACGTCCTGCGCTGGGTCTCCCATCTaGGGGTTCTTTAGGTACACA | + |
|
Preference number: 4 (lower is better) Translates to: LDKHAQPRGRGHCSFTSCAGSPI*GFFRYT Trigger: TGTGTACCTAAAGAACCCTCAGATGGGAGACCCAGC...GCAGGACGTGAAGCTGCAATGGCCCCTCCCTCTAGGCTGAGCATGCTTATCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 |
||
| CDS-3UTR TCA 90 bp | CTAGGTCTTCCTCATGTGAGTCCTGAACAGCCTCACAGGGGTCCCAGAGGGCAGGCTGGGTCTCCCATCTaGGGGTTCTTTAGGTACACA | + |
|
Preference number: 4 (lower is better) Translates to: LGLPHVSPEQPHRGPRGQAGSPI*GFFRYT Trigger: TGTGTACCTAAAGAACCCTCAGATGGGAGACCCAGC...CTGCCCTCTGGGACCCCTGTGAGGCTGTTCAGGACTCACATGAGGAAGACCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR TCA 90 bp | TGCCCCCAGTTCCCCGAGTGTCTGAGTCGCTTGCTCTCTGCTGACCTCTTGAAGGCTGGGTCTCCCATCTaGGGGTTCTTTAGGTACACA | + |
|
Preference number: 4 (lower is better) Translates to: CPQFPECLSRLLSADLLKAGSPI*GFFRYT Trigger: TGTGTACCTAAAGAACCCTCAGATGGGAGACCCAGC...CTTCAAGAGGTCAGCAGAGAGCAAGCGACTCAGACACTCGGGGAACTGGGGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000073879.12 ENSMUST00000128500.8 |
||
| CDS-3UTR TCA 90 bp | GGGGCTTGTGGCCAAAGCCTTGAGTACTTCTGTACCAGGAAAGGAGAGAGTGGCCAGGCCTCAAACTTCTaGGCCTCCAGCCGCAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GACGQSLEYFCTRKGESGQASNF*ASSRSF Trigger: GAAACTGCGGCTGGAGGCTCAGAAGTTTGAGGCCTG...GCCACTCTCTCCTTTCCTGGTACAGAAGTACTCAAGGCTTTGGCCACAAGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR GCA 90 bp | AGGGCAGTGTGCCGGGCTTGGCCTTACGGGGAGGAGGCGGGGCCAAGAAAGCCTTTACTTGACTCCAGTTaGTTCCAACACGTTTCTATG | + |
|
Preference number: 4 (lower is better) Translates to: RAVCRAWPYGEEAGPRKPLLDSS*FQHVSM Trigger: CATAGAAACGTGTTGGAAGCAACTGGAGTCAAGTAA...AGGCTTTCTTGGCCCCGCCTCCTCCCCGTAAGGCCAAGCCCGGCACACTGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR GCA 90 bp | TACCCTCCCCTCTGCTCTGAGGTGGTACCTCACAAAATGTCTGTAATACTGGCCGGGGCCAGGACCTTGTaGTCGCTCTCCTGGCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: YPPLCSEVVPHKMSVILAGARTL*SLSWLC Trigger: GCAAAGCCAGGAGAGCGAGCACAAGGTCCTGGCCCC...GGCCAGTATTACAGACATTTTGTGAGGTACCACCTCAGAGCAGAGGGGAGGGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR GCA 90 bp | CTGGATAAGCATGCTCAGCCTAGAGGGAGGGGCCATTGCAGCTTCACGTCCTGCATGTGTAGAGGGCCTTaGAGGTCCCTATGGCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LDKHAQPRGRGHCSFTSCMCRGP*RSLWLE Trigger: TTCCAGCCATAGGGACCTGCAAGGCCCTCTACACAT...GCAGGACGTGAAGCTGCAATGGCCCCTCCCTCTAGGCTGAGCATGCTTATCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 |
||
| CDS-3UTR GCA 90 bp | GTCAGCACTTCCACAAACCGTGGACAAAGCACAGGCCCAACCCTGAGGACCTGCATGTGTAGAGGGCCTTaGAGGTCCCTATGGCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VSTSTNRGQSTGPTLRTCMCRGP*RSLWLE Trigger: TTCCAGCCATAGGGACCTGCAAGGCCCTCTACACAT...GCAGGTCCTCAGGGTTGGGCCTGTGCTTTGTCCACGGTTTGTGGAAGTGCTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CCA 90 bp | GTAACCTGCTGGAGCGAAACTGCCTGGGCCACAGGTCAGACTAACTGTGTCAGCAACTCGTTGAAGCGGTaGGAGAGGGGTTCCTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VTCWSETAWATGQTNCVSNSLKR*ERGSFG Trigger: GCCAAAGGAACCCCTCTCCCACCGCTTCAACGAGTT...GCTGACACAGTTAGTCTGACCTGTGGCCCAGGCAGTTTCGCTCCAGCAGGTTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113559.10 ENSMUST00000113560.8 |
||
| CDS-3UTR CCA 90 bp | TGCGAAGGACCACCTCGGTACTCCCCCAAGCTCCACCACTCTAGGAGGGCAACAGTGATGGCATCTCTCTaGTCCGTCTCCTTCTGTATC | + |
|
Preference number: 4 (lower is better) Translates to: CEGPPRYSPKLHHSRRATVMASL*SVSFCI Trigger: GATACAGAAGGAGACGGACCAGAGAGATGCCATCAC...TGTTGCCCTCCTAGAGTGGTGGAGCTTGGGGGAGTACCGAGGTGGTCCTTCGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CCA 90 bp | GAGTGTCTGAGTCGCTTGCTCTCTGCTGACCTCTTGAAGGCCTGTAACAGCCACGCAGGTCCCTATGGCTaGAAGCGGCTCCTCATCATC | + |
|
Preference number: 4 (lower is better) Translates to: ECLSRLLSADLLKACNSHAGPYG*KRLLII Trigger: GATGATGAGGAGCCGCTTCCAGCCATAGGGACCTGC...GTGGCTGTTACAGGCCTTCAAGAGGTCAGCAGAGAGCAAGCGACTCAGACACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073879.12 ENSMUST00000128500.8 |
||
| CDS-3UTR CCA 90 bp | CAGTTGACAAAGGCACAGTGTGAGATGTGCAAGGAGTGGCCAGGCGATGAGCAGCCTTGCAGGTCCCTATaGCTGGAAGCGGCTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QLTKAQCEMCKEWPGDEQPCRSL*LEAAPH Trigger: ATGAGGAGCCGCTTCCAGCCATAGGGACCTGCAAGG...CTGCTCATCGCCTGGCCACTCCTTGCACATCTCACACTGTGCCTTTGTCAACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| 3UTR CAA 72 bp | GTGGGCTGTCATGATGGGCACCATTCAGTCCTGGGCTaGGCAGCTGCCTCTGCACATGCCCAGTGTTATTCT | + |
|
Preference number: 4 (lower is better) Translates to: VGCHDGHHSVLG*AAASAHAQCYS Trigger: AGAATAACACTGGGCATGTGCAGAGGCAGCTGCCAAGCCCAGGACTGAATGGTGCCCATCATGACAGCCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| 3UTR CAA 72 bp | GAGAGAGAGGCAGGCGGTTTGCCGCTGGCAAACTGCTaGCCTTGTGGAGAAGGGAGGGGCTTAAGTAATTGG | + |
|
Preference number: 4 (lower is better) Translates to: EREAGGLPLANC*PCGEGRGLSNW Trigger: CCAATTACTTAAGCCCCTCCCTTCTCCACAAGGCAAGCAGTTTGCCAGCGGCAAACCGCCTGCCTCTCTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| 3UTR CAA 72 bp | GTGGGGCACCCTTCACAGGGGCTTGTGGCCAAAGCCTaGAGTACTTCTGTACCAGGAAAGGAGAGAGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VGHPSQGLVAKA*STSVPGKERVA Trigger: AGCCACTCTCTCCTTTCCTGGTACAGAAGTACTCAAGGCTTTGGCCACAAGCCCCTGTGAAGGGTGCCCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR TCA 90 bp | CAGTTCCCCGAGTGTCTGAGTCGCTTGCTCTCTGCTGACCTCTTGAAGGCCTGTCCGCCTTGGTCACGTTaGTGTCAGCGTCCATTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QFPECLSRLLSADLLKACPPWSR*CQRPFS Trigger: AGAAAATGGACGCTGACATCAACGTGACCAAGGCGG...ACAGGCCTTCAAGAGGTCAGCAGAGAGCAAGCGACTCAGACACTCGGGGAACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073879.12 ENSMUST00000128500.8 |
||
| CDS-3UTR TCA 90 bp | GTAACCTGCTGGAGCGAAACTGCCTGGGCCACAGGTCAGACTAACTGTGTCAGCGCTGGGTCTCCCATCTaGGGGTTCTTTAGGTACACA | + |
|
Preference number: 4 (lower is better) Translates to: VTCWSETAWATGQTNCVSAGSPI*GFFRYT Trigger: TGTGTACCTAAAGAACCCTCAGATGGGAGACCCAGC...GCTGACACAGTTAGTCTGACCTGTGGCCCAGGCAGTTTCGCTCCAGCAGGTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR GCA 90 bp | CTGGATAAGCATGCTCAGCCTAGAGGGAGGGGCCATTGCAGCTTCACGTCCTGCTGCTTTGCTGTCCTCTaGCATTTGCTGGCGTATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LDKHAQPRGRGHCSFTSCCFAVL*HLLAYL Trigger: CAGATACGCCAGCAAATGGCAGAGGACAGCAAAGCA...GCAGGACGTGAAGCTGCAATGGCCCCTCCCTCTAGGCTGAGCATGCTTATCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 |
||
| CDS-3UTR GCA 90 bp | CTAGGTCTTCCTCATGTGAGTCCTGAACAGCCTCACAGGGGTCCCAGAGGGCAGTGCTTTGCTGTCCTCTaGCATTTGCTGGCGTATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LGLPHVSPEQPHRGPRGQCFAVL*HLLAYL Trigger: CAGATACGCCAGCAAATGGCAGAGGACAGCAAAGCA...CTGCCCTCTGGGACCCCTGTGAGGCTGTTCAGGACTCACATGAGGAAGACCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR GCA 90 bp | CAAAGGCACAGTGTGAGATGTGCAAGGAGTGGCCAGGCGATGAGCAGGTGGACTATGTGTAGAGGGCCTTaGAGGTCCCTATGGCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QRHSVRCARSGQAMSRWTMCRGP*RSLWLE Trigger: TTCCAGCCATAGGGACCTGCAAGGCCCTCTACACAT...AGTCCACCTGCTCATCGCCTGGCCACTCCTTGCACATCTCACACTGTGCCTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR GCA 90 bp | CAGTTCCCCGAGTGTCTGAGTCGCTTGCTCTCTGCTGACCTCTTGAAGGCCTGTCTTCATTTCTGCGGATaGGAGTCCACCCATCGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QFPECLSRLLSADLLKACLHFCG*ESTHRL Trigger: AAGGCGATGGGTGGACTCGCATCCGCAGAAATGAAG...ACAGGCCTTCAAGAGGTCAGCAGAGAGCAAGCGACTCAGACACTCGGGGAACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073879.12 ENSMUST00000128500.8 |
||
| CDS-3UTR GCA 90 bp | CTGGCTCTTGATGGCCTTGAGGTGGGCTGTCATGATGGGCACCATTCAGTCCTGCCTCGTCTTCATTTCTaGGGATGCGAGTCCACCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LALDGLEVGCHDGHHSVLPRLHF*GCESTH Trigger: ATGGGTGGACTCGCATCCGCAGAAATGAAGACGAGG...CAGGACTGAATGGTGCCCATCATGACAGCCCACCTCAAGGCCATCAAGAGCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| CDS-3UTR GCA 90 bp | CAGTTCCCCGAGTGTCTGAGTCGCTTGCTCTCTGCTGACCTCTTGAAGGCCTGTCCTCGTCTTCATTTCTaGGGATGCGAGTCCACCCAT | + |
|
Preference number: 4 (lower is better) Translates to: QFPECLSRLLSADLLKACPRLHF*GCESTH Trigger: ATGGGTGGACTCGCATCCGCAGAAATGAAGACGAGG...ACAGGCCTTCAAGAGGTCAGCAGAGAGCAAGCGACTCAGACACTCGGGGAACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073879.12 ENSMUST00000128500.8 |
||
| CDS-3UTR CCA 90 bp | CACCCGTGCCGTACACAGGCAGAGGGACTGGCGGAGCCACAGGAACATGCTGTGTATTCCCATTGCTCCTaGTTGAATCTCTGCAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: HPCRTQAEGLAEPQEHAVYSHCS*LNLCRI Trigger: AATCCTGCAGAGATTCAACCAGGAGCAATGGGAATA...CACAGCATGTTCCTGTGGCTCCGCCAGTCCCTCTGCCTGTGTACGGCACGGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CCA 90 bp | CCCCAGTTCCCCGAGTGTCTGAGTCGCTTGCTCTCTGCTGACCTCTTGAAGGCCTGCCTTCTTTGGAGCTaGAAAGGCTGTTGTCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: PQFPECLSRLLSADLLKACLLWS*KGCCLT Trigger: TGTCAGACAACAGCCTTTCCAGCTCCAAAGAAGGCA...GGCCTTCAAGAGGTCAGCAGAGAGCAAGCGACTCAGACACTCGGGGAACTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| CDS-3UTR CCA 90 bp | CAGTTGACAAAGGCACAGTGTGAGATGTGCAAGGAGTGGCCAGGCGATGAGCAGAACTCGTTGAAGCGGTaGGAGAGGGGTTCCTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: QLTKAQCEMCKEWPGDEQNSLKR*ERGSFG Trigger: GCCAAAGGAACCCCTCTCCCACCGCTTCAACGAGTT...CTGCTCATCGCCTGGCCACTCCTTGCACATCTCACACTGTGCCTTTGTCAACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113559.10 ENSMUST00000113560.8 |
||
| CDS-3UTR CCA 90 bp | CTAGGTCTTCCTCATGTGAGTCCTGAACAGCCTCACAGGGGTCCCAGAGGGCAGCCTTCTCTGCTCAGGTaGGAAGTTGCTGAAGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LGLPHVSPEQPHRGPRGQPSLLR*EVAEVF Trigger: GAAGACTTCAGCAACTTCCCACCTGAGCAGAGAAGG...CTGCCCTCTGGGACCCCTGTGAGGCTGTTCAGGACTCACATGAGGAAGACCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CCA 90 bp | TCACAGGGGCTTGTGGCCAAAGCCTTGAGTACTTCTGTACCAGGAAAGGAGAGAGCTTCTGGTCCAGGCTaGCTGGGTCTCCCATCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SQGLVAKALSTSVPGKERASGPG*LGLPSE Trigger: CTCAGATGGGAGACCCAGCCAGCCTGGACCAGAAGC...TCTCTCCTTTCCTGGTACAGAAGTACTCAAGGCTTTGGCCACAAGCCCCTGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CCA 90 bp | CCCGTGCCGTACACAGGCAGAGGGACTGGCGGAGCCACAGGAACATGCTGTGAACTTCAACTACGGAAATaGTGCCTTCGTTCTGACCTT | + |
|
Preference number: 4 (lower is better) Translates to: PVPYTGRGTGGATGTCCELQLRK*CLRSDL Trigger: AAGGTCAGAACGAAGGCACCATTTCCGTAGTTGAAG...TTCACAGCATGTTCCTGTGGCTCCGCCAGTCCCTCTGCCTGTGTACGGCACGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| 3UTR CAA 72 bp | GAGGCGGGGCCAAGAAAGCCTGAAGCTAATCCTTGCTaGCTCTTGAAACCCAAAGCCAGGCCCACCTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: EAGPRKPEANPC*LLKPKARPTLS Trigger: TGACAAGGTGGGCCTGGCTTTGGGTTTCAAGAGCAAGCAAGGATTAGCTTCAGGCTTTCTTGGCCCCGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR TCA 90 bp | CCGGTCCTGGGACAACGCATCTGCAATAAGACAGAGGCCATGGCAAAGACTCCACCGCCTTGGTCACGTTaGTGTCAGCGTCCATTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PVLGQRICNKTEAMAKTPPPWSR*CQRPFS Trigger: AGAAAATGGACGCTGACATCAACGTGACCAAGGCGG...TGGAGTCTTTGCCATGGCCTCTGTCTTATTGCAGATGCGTTGTCCCAGGACCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113552.9 |
||
| CDS-3UTR TCA 90 bp | GGGGAGGAGGCGGGGCCAAGAAAGCCTGAAGCTAATCCTTGCTTGCTCTTGAAACCGCCTTGGTCACGTTaGTGTCAGCGTCCATTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GEEAGPRKPEANPCLLLKPPWSR*CQRPFS Trigger: AGAAAATGGACGCTGACATCAACGTGACCAAGGCGG...TTTCAAGAGCAAGCAAGGATTAGCTTCAGGCTTTCTTGGCCCCGCCTCCTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR TCA 90 bp | CTAGGTCTTCCTCATGTGAGTCCTGAACAGCCTCACAGGGGTCCCAGAGGGCAGATTTGCTGGCGTATCTaGGCTTGTTGTCGTGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LGLPHVSPEQPHRGPRGQICWRI*ACCRAF Trigger: AAAGGCACGACAACAAGCTCAGATACGCCAGCAAAT...CTGCCCTCTGGGACCCCTGTGAGGCTGTTCAGGACTCACATGAGGAAGACCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR TCA 90 bp | TGGACATTCTACGTTCACTACAGATGCCACCAGAAGGCATTAATGGCCTCCCTGCCAGGCACTTCCCGATaGTGGGTATCACCTGCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: WTFYVHYRCHQKALMASLPGTSR*WVSPAG Trigger: ACCGGCAGGTGATACCCATCATCGGGAAGTGCCTGG...CAGGGAGGCCATTAATGCCTTCTGGTGGCATCTGTAGTGAACGTAGAATGTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 |
||
| CDS-3UTR TCA 90 bp | TACCCTCCCCTCTGCTCTGAGGTGGTACCTCACAAAATGTCTGTAATACTGGCCCAGGCCTCAAACTTCTaGGCCTCCAGCCGCAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: YPPLCSEVVPHKMSVILAQASNF*ASSRSF Trigger: GAAACTGCGGCTGGAGGCTCAGAAGTTTGAGGCCTG...GGCCAGTATTACAGACATTTTGTGAGGTACCACCTCAGAGCAGAGGGGAGGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR GCA 90 bp | AGGGAAGGCCTGAGGCAGCAGCCTCTGGACATGAAGGACACATCTGACGATGAGTGCTTTGCTGTCCTCTaGCATTTGCTGGCGTATCTG | + |
|
Preference number: 4 (lower is better) Translates to: REGLRQQPLDMKDTSDDECFAVL*HLLAYL Trigger: CAGATACGCCAGCAAATGGCAGAGGACAGCAAAGCA...CTCATCGTCAGATGTGTCCTTCATGTCCAGAGGCTGCTGCCTCAGGCCTTCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR GCA 90 bp | TCACAGGGGCTTGTGGCCAAAGCCTTGAGTACTTCTGTACCAGGAAAGGAGAGACTGCCGGTCCACCTCTaGGTACGTCTTCATGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: SQGLVAKALSTSVPGKERLPVHL*VRLHGL Trigger: GAGTCCATGAAGACGTACGCAGAGGTGGACCGGCAG...TCTCTCCTTTCCTGGTACAGAAGTACTCAAGGCTTTGGCCACAAGCCCCTGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR GCA 90 bp | GGGGCTTGTGGCCAAAGCCTTGAGTACTTCTGTACCAGGAAAGGAGAGAGTGGCATGTGTAGAGGGCCTTaGAGGTCCCTATGGCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GACGQSLEYFCTRKGESGMCRGP*RSLWLE Trigger: TTCCAGCCATAGGGACCTGCAAGGCCCTCTACACAT...GCCACTCTCTCCTTTCCTGGTACAGAAGTACTCAAGGCTTTGGCCACAAGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR GCA 90 bp | GGGGAGGAGGCGGGGCCAAGAAAGCCTGAAGCTAATCCTTGCTTGCTCTTGAAAATGTGTAGAGGGCCTTaGAGGTCCCTATGGCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GEEAGPRKPEANPCLLLKMCRGP*RSLWLE Trigger: TTCCAGCCATAGGGACCTGCAAGGCCCTCTACACAT...TTTCAAGAGCAAGCAAGGATTAGCTTCAGGCTTTCTTGGCCCCGCCTCCTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR GCA 90 bp | CTGAGTCGCTTGCTCTCTGCTGACCTCTTGAAGGCCTGTAACAGCCACAGTGGTATGTGTAGAGGGCCTTaGAGGTCCCTATGGCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LSRLLSADLLKACNSHSGMCRGP*RSLWLE Trigger: TTCCAGCCATAGGGACCTGCAAGGCCCTCTACACAT...ACCACTGTGGCTGTTACAGGCCTTCAAGAGGTCAGCAGAGAGCAAGCGACTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073879.12 ENSMUST00000128500.8 |
||
| CDS-3UTR GCA 90 bp | ATGACAGCTGGGTGCTCAGTCCACCTGATGCACAACTGGCCCTCCTTGTCAGAACTTCATTTCTGCGGATaGGAGTCCACCCATCGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: MTAGCSVHLMHNWPSLSELHFCG*ESTHRL Trigger: AAGGCGATGGGTGGACTCGCATCCGCAGAAATGAAG...TTCTGACAAGGAGGGCCAGTTGTGCATCAGGTGGACTGAGCACCCAGCTGTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CCA 90 bp | CTGGATAAGCATGCTCAGCCTAGAGGGAGGGGCCATTGCAGCTTCACGTCCTGCTGCCTTCTTTGGAGCTaGAAAGGCTGTTGTCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: LDKHAQPRGRGHCSFTSCCLLWS*KGCCLT Trigger: TGTCAGACAACAGCCTTTCCAGCTCCAAAGAAGGCA...GCAGGACGTGAAGCTGCAATGGCCCCTCCCTCTAGGCTGAGCATGCTTATCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 |
||
| CDS-3UTR CCA 90 bp | AGGGAAGGCCTGAGGCAGCAGCCTCTGGACATGAAGGACACATCTGACGATGAGCCTTCTCTGCTCAGGTaGGAAGTTGCTGAAGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: REGLRQQPLDMKDTSDDEPSLLR*EVAEVF Trigger: GAAGACTTCAGCAACTTCCCACCTGAGCAGAGAAGG...CTCATCGTCAGATGTGTCCTTCATGTCCAGAGGCTGCTGCCTCAGGCCTTCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CCA 90 bp | GTAACCTGCTGGAGCGAAACTGCCTGGGCCACAGGTCAGACTAACTGTGTCAGCGTGATGGCATCTCTCTaGTCCGTCTCCTTCTGTATC | + |
|
Preference number: 4 (lower is better) Translates to: VTCWSETAWATGQTNCVSVMASL*SVSFCI Trigger: GATACAGAAGGAGACGGACCAGAGAGATGCCATCAC...GCTGACACAGTTAGTCTGACCTGTGGCCCAGGCAGTTTCGCTCCAGCAGGTTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CCA 90 bp | AGTCGCTTGCTCTCTGCTGACCTCTTGAAGGCCTGTAACAGCCACAGTGGTGGGGTGATGGCATCTCTCTaGTCCGTCTCCTTCTGTATC | + |
|
Preference number: 4 (lower is better) Translates to: SRLLSADLLKACNSHSGGVMASL*SVSFCI Trigger: GATACAGAAGGAGACGGACCAGAGAGATGCCATCAC...CCCACCACTGTGGCTGTTACAGGCCTTCAAGAGGTCAGCAGAGAGCAAGCGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073879.12 ENSMUST00000128500.8 |
||
| CDS-3UTR CCA 90 bp | TACCCTCCCCTCTGCTCTGAGGTGGTACCTCACAAAATGTCTGTAATACTGGCCACTTCGGTGAGCTTCTaGTCCAGGCTGGCTGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: YPPLCSEVVPHKMSVILATSVSF*SRLAGS Trigger: AGACCCAGCCAGCCTGGACCAGAAGCTCACCGAAGT...GGCCAGTATTACAGACATTTTGTGAGGTACCACCTCAGAGCAGAGGGGAGGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| 3UTR CAA 72 bp | GAACAGGATCCGATGAAGAAGCAGTGGCCAGAGCCATaGGAGGGACTACAAGAGGCACAAGGTCTTTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: EQDPMKKQWPEP*EGLQEAQGLWW Trigger: CCACCAAAGACCTTGTGCCTCTTGTAGTCCCTCCAATGGCTCTGGCCACTGCTTCTTCATCGGATCCTGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR TCA 90 bp | CCAGAGCCAGTACAGTTCCACAGGATGTCCACGGCAGACCGACTTTCTCAGAGACCCATTGCTCCTGGTTaGATCTCTGCAGGATTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PEPVQFHRMSTADRLSQRPIAPG*ISAGLR Trigger: CCTTAATCCTGCAGAGATTCAACCAGGAGCAATGGG...TCTCTGAGAAAGTCGGTCTGCCGTGGACATCCTGTGGAACTGTACTGGCTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR TCA 90 bp | GGGGCTTGTGGCCAAAGCCTTGAGTACTTCTGTACCAGGAAAGGAGAGAGTGGCCCCATTGCTCCTGGTTaGATCTCTGCAGGATTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GACGQSLEYFCTRKGESGPIAPG*ISAGLR Trigger: CCTTAATCCTGCAGAGATTCAACCAGGAGCAATGGG...GCCACTCTCTCCTTTCCTGGTACAGAAGTACTCAAGGCTTTGGCCACAAGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR GCA 90 bp | CCCCAGTTCCCCGAGTGTCTGAGTCGCTTGCTCTCTGCTGACCTCTTGAAGGCCTGGAAAGAAAGGCTTTaGAAGCCGTGTACTTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: PQFPECLSRLLSADLLKAWKERL*KPCTCT Trigger: AGTACAAGTACACGGCTTGCAAAGCCTTTCTTTCCA...GGCCTTCAAGAGGTCAGCAGAGAGCAAGCGACTCAGACACTCGGGGAACTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073879.12 ENSMUST00000128500.8 |
||
| CDS-3UTR GCA 90 bp | ACCTTGTCAGCTGCTCCCCCACCTTGGTACCCTCCCCTCTGCTCTGAGGTGGTATGGAAAGAAAGGCTTTaGAAGCCGTGTACTTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: TLSAAPPPWYPPLCSEVVWKERL*KPCTCT Trigger: AGTACAAGTACACGGCTTGCAAAGCCTTTCTTTCCA...TACCACCTCAGAGCAGAGGGGAGGGTACCAAGGTGGGGGAGCAGCTGACAAGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR GCA 90 bp | CAGTTGACAAAGGCACAGTGTGAGATGTGCAAGGAGTGGCCAGGCGATGAGCAGTGCTTTGCTGTCCTCTaGCATTTGCTGGCGTATCTG | + |
|
Preference number: 4 (lower is better) Translates to: QLTKAQCEMCKEWPGDEQCFAVL*HLLAYL Trigger: CAGATACGCCAGCAAATGGCAGAGGACAGCAAAGCA...CTGCTCATCGCCTGGCCACTCCTTGCACATCTCACACTGTGCCTTTGTCAACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR GCA 90 bp | GGGGAGGAGGCGGGGCCAAGAAAGCCTGAAGCTAATCCTTGCTTGCTCTTGAAATGCTTTGCTGTCCTCTaGCATTTGCTGGCGTATCTG | + |
|
Preference number: 4 (lower is better) Translates to: GEEAGPRKPEANPCLLLKCFAVL*HLLAYL Trigger: CAGATACGCCAGCAAATGGCAGAGGACAGCAAAGCA...TTTCAAGAGCAAGCAAGGATTAGCTTCAGGCTTTCTTGGCCCCGCCTCCTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR GCA 90 bp | CTGGATAAGCATGCTCAGCCTAGAGGGAGGGGCCATTGCAGCTTCACGTCCTGCCAACTACGGAAATGGTaGCTTCGTTCTGACCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LDKHAQPRGRGHCSFTSCQLRKW*LRSDLQ Trigger: TTGAAGGTCAGAACGAAGGCACCATTTCCGTAGTTG...GCAGGACGTGAAGCTGCAATGGCCCCTCCCTCTAGGCTGAGCATGCTTATCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 |
||
| CDS-3UTR CCA 90 bp | TGCGAAGGACCACCTCGGTACTCCCCCAAGCTCCACCACTCTAGGAGGGCAACATTTTCTGGAAGATGTTaGGGATGTGGGTATGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: CEGPPRYSPKLHHSRRATFSGRC*GCGYGS Trigger: ACTACCATACCCACATCCCCAACATCTTCCAGAAAA...TGTTGCCCTCCTAGAGTGGTGGAGCTTGGGGGAGTACCGAGGTGGTCCTTCGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CCA 90 bp | AAAGGTGCGAAGGACCACCTCGGTACTCCCCCAAGCTCCACCACTCTAGGAGGGTTTTCTGGAAGATGTTaGGGATGTGGGTATGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: KGAKDHLGTPPSSTTLGGFSGRC*GCGYGS Trigger: ACTACCATACCCACATCCCCAACATCTTCCAGAAAA...CCCTCCTAGAGTGGTGGAGCTTGGGGGAGTACCGAGGTGGTCCTTCGCACCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| CDS-3UTR CCA 90 bp | CAAAGGCACAGTGTGAGATGTGCAAGGAGTGGCCAGGCGATGAGCAGGTGGACTTGCCTTCTTTGGAGCTaGAAAGGCTGTTGTCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: QRHSVRCARSGQAMSRWTCLLWS*KGCCLT Trigger: TGTCAGACAACAGCCTTTCCAGCTCCAAAGAAGGCA...AGTCCACCTGCTCATCGCCTGGCCACTCCTTGCACATCTCACACTGTGCCTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CCA 90 bp | ATGACAGCTGGGTGCTCAGTCCACCTGATGCACAACTGGCCCTCCTTGTCAGAACCTTCTCTGCTCAGGTaGGAAGTTGCTGAAGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: MTAGCSVHLMHNWPSLSEPSLLR*EVAEVF Trigger: GAAGACTTCAGCAACTTCCCACCTGAGCAGAGAAGG...TTCTGACAAGGAGGGCCAGTTGTGCATCAGGTGGACTGAGCACCCAGCTGTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| CDS-3UTR CCA 90 bp | GGGGCTTGTGGCCAAAGCCTTGAGTACTTCTGTACCAGGAAAGGAGAGAGTGGCCCTTCTCTGCTCAGGTaGGAAGTTGCTGAAGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GACGQSLEYFCTRKGESGPSLLR*EVAEVF Trigger: GAAGACTTCAGCAACTTCCCACCTGAGCAGAGAAGG...GCCACTCTCTCCTTTCCTGGTACAGAAGTACTCAAGGCTTTGGCCACAAGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| CDS-3UTR CCA 90 bp | CTGAGTCGCTTGCTCTCTGCTGACCTCTTGAAGGCCTGTAACAGCCACAGTGGTCCTTCTCTGCTCAGGTaGGAAGTTGCTGAAGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LSRLLSADLLKACNSHSGPSLLR*EVAEVF Trigger: GAAGACTTCAGCAACTTCCCACCTGAGCAGAGAAGG...ACCACTGTGGCTGTTACAGGCCTTCAAGAGGTCAGCAGAGAGCAAGCGACTCAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073879.12 ENSMUST00000128500.8 |
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| CDS-3UTR CCA 90 bp | GGGGCTTGTGGCCAAAGCCTTGAGTACTTCTGTACCAGGAAAGGAGAGAGTGGCGTGATGGCATCTCTCTaGTCCGTCTCCTTCTGTATC | + |
|
Preference number: 4 (lower is better) Translates to: GACGQSLEYFCTRKGESGVMASL*SVSFCI Trigger: GATACAGAAGGAGACGGACCAGAGAGATGCCATCAC...GCCACTCTCTCCTTTCCTGGTACAGAAGTACTCAAGGCTTTGGCCACAAGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| CDS-3UTR CCA 90 bp | CAGTTGACAAAGGCACAGTGTGAGATGTGCAAGGAGTGGCCAGGCGATGAGCAGGTGATGGCATCTCTCTaGTCCGTCTCCTTCTGTATC | + |
|
Preference number: 4 (lower is better) Translates to: QLTKAQCEMCKEWPGDEQVMASL*SVSFCI Trigger: GATACAGAAGGAGACGGACCAGAGAGATGCCATCAC...CTGCTCATCGCCTGGCCACTCCTTGCACATCTCACACTGTGCCTTTGTCAACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| CDS-3UTR CCA 90 bp | CTACAAGAGGCACAAGGTCTTTGGTGGGAACAGAGGAGAGTCCTCAAATGCTACACTTCGGTGAGCTTCTaGTCCAGGCTGGCTGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LQEAQGLWWEQRRVLKCYTSVSF*SRLAGS Trigger: AGACCCAGCCAGCCTGGACCAGAAGCTCACCGAAGT...GTAGCATTTGAGGACTCTCCTCTGTTCCCACCAAAGACCTTGTGCCTCTTGTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| CDS-3UTR TCA 90 bp | GTAACCTGCTGGAGCGAAACTGCCTGGGCCACAGGTCAGACTAACTGTGTCAGCAAACCTCCTCTTACTTaGCTCCAGTTGCTTCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: VTCWSETAWATGQTNCVSKPPLT*LQLLPT Trigger: TGTTGGAAGCAACTGGAGTCAAGTAAGAGGAGGTTT...GCTGACACAGTTAGTCTGACCTGTGGCCCAGGCAGTTTCGCTCCAGCAGGTTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| CDS-3UTR TCA 90 bp | CAGTTCCCCGAGTGTCTGAGTCGCTTGCTCTCTGCTGACCTCTTGAAGGCCTGTAAACCTCCTCTTACTTaGCTCCAGTTGCTTCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: QFPECLSRLLSADLLKACKPPLT*LQLLPT Trigger: TGTTGGAAGCAACTGGAGTCAAGTAAGAGGAGGTTT...ACAGGCCTTCAAGAGGTCAGCAGAGAGCAAGCGACTCAGACACTCGGGGAACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073879.12 ENSMUST00000128500.8 |
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| CDS-3UTR GCA 90 bp | GTCAGGCTGGCAAGCTTGATTAGATGGGACTCGGTCCCCTTGCTCCCAGCAGTCTGGAAAGAAAGGCTTTaGAAGCCGTGTACTTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: VRLASLIRWDSVPLLPAVWKERL*KPCTCT Trigger: AGTACAAGTACACGGCTTGCAAAGCCTTTCTTTCCA...GACTGCTGGGAGCAAGGGGACCGAGTCCCATCTAATCAAGCTTGCCAGCCTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113552.9 |
||
| CDS-3UTR GCA 90 bp | GAGTGCTCTCTACTGAAAGCACTTTGTTTGGTTTTAATTCCACCTCCAGAGTCACTCTGCCGGCGTGCCTaGTCACTCCGAGCTGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: ECSLLKALCLVLIPPPESLCRRA*SLRAGS Trigger: ACTCCCAGCTCGGAGTGAGCAGGCACGCCGGCAGAG...TGACTCTGGAGGTGGAATTAAAACCAAACAAAGTGCTTTCAGTAGAGAGCACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 |
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| CDS-3UTR GCA 90 bp | GTAACCTGCTGGAGCGAAACTGCCTGGGCCACAGGTCAGACTAACTGTGTCAGCCAACTACGGAAATGGTaGCTTCGTTCTGACCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: VTCWSETAWATGQTNCVSQLRKW*LRSDLQ Trigger: TTGAAGGTCAGAACGAAGGCACCATTTCCGTAGTTG...GCTGACACAGTTAGTCTGACCTGTGGCCCAGGCAGTTTCGCTCCAGCAGGTTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR GCA 90 bp | GCACAACTGGCCCTCCTTGTCAGAATTTTGTTAGTCACCAGGAAACCAGGGGTGCCTCGTCTTCATTTCTaGGGATGCGAGTCCACCCAT | + |
|
Preference number: 4 (lower is better) Translates to: AQLALLVRILLVTRKPGVPRLHF*GCESTH Trigger: ATGGGTGGACTCGCATCCGCAGAAATGAAGACGAGG...CACCCCTGGTTTCCTGGTGACTAACAAAATTCTGACAAGGAGGGCCAGTTGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CCA 90 bp | ACCTTGTCAGCTGCTCCCCCACCTTGGTACCCTCCCCTCTGCTCTGAGGTGGTAATCTCTTGTATTTTCTaGAAGATGTTGGGGATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TLSAAPPPWYPPLCSEVVISCIF*KMLGMW Trigger: CCACATCCCCAACATCTTCCAGAAAATACAAGAGAT...TACCACCTCAGAGCAGAGGGGAGGGTACCAAGGTGGGGGAGCAGCTGACAAGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CCA 90 bp | CTAGGTCTTCCTCATGTGAGTCCTGAACAGCCTCACAGGGGTCCCAGAGGGCAGCACTGTGCGTTTCATTaGCTGTGTGTAATCTTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: LGLPHVSPEQPHRGPRGQHCAFH*LCVIFE Trigger: TTCGAAGATTACACACAGCCAATGAAACGCACAGTG...CTGCCCTCTGGGACCCCTGTGAGGCTGTTCAGGACTCACATGAGGAAGACCTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CCA 90 bp | GTCAGGCTGGCAAGCTTGATTAGATGGGACTCGGTCCCCTTGCTCCCAGCAGTCCACTGTGCGTTTCATTaGCTGTGTGTAATCTTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: VRLASLIRWDSVPLLPAVHCAFH*LCVIFE Trigger: TTCGAAGATTACACACAGCCAATGAAACGCACAGTG...GACTGCTGGGAGCAAGGGGACCGAGTCCCATCTAATCAAGCTTGCCAGCCTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113552.9 |
||
| CDS-3UTR CCA 90 bp | CTGGATAAGCATGCTCAGCCTAGAGGGAGGGGCCATTGCAGCTTCACGTCCTGCCACTGTGCGTTTCATTaGCTGTGTGTAATCTTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: LDKHAQPRGRGHCSFTSCHCAFH*LCVIFE Trigger: TTCGAAGATTACACACAGCCAATGAAACGCACAGTG...GCAGGACGTGAAGCTGCAATGGCCCCTCCCTCTAGGCTGAGCATGCTTATCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 |
||
| CDS-3UTR CCA 90 bp | CCAGAGCCAGTACAGTTCCACAGGATGTCCACGGCAGACCGACTTTCTCAGAGATGCCTTCTTTGGAGCTaGAAAGGCTGTTGTCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: PEPVQFHRMSTADRLSQRCLLWS*KGCCLT Trigger: TGTCAGACAACAGCCTTTCCAGCTCCAAAGAAGGCA...TCTCTGAGAAAGTCGGTCTGCCGTGGACATCCTGTGGAACTGTACTGGCTCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CCA 90 bp | GGGGAGGAGGCGGGGCCAAGAAAGCCTGAAGCTAATCCTTGCTTGCTCTTGAAATGCCTTCTTTGGAGCTaGAAAGGCTGTTGTCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: GEEAGPRKPEANPCLLLKCLLWS*KGCCLT Trigger: TGTCAGACAACAGCCTTTCCAGCTCCAAAGAAGGCA...TTTCAAGAGCAAGCAAGGATTAGCTTCAGGCTTTCTTGGCCCCGCCTCCTCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CCA 90 bp | AGGGAAGGCCTGAGGCAGCAGCCTCTGGACATGAAGGACACATCTGACGATGAGCTTCAACTACGGAAATaGTGCCTTCGTTCTGACCTT | + |
|
Preference number: 4 (lower is better) Translates to: REGLRQQPLDMKDTSDDELQLRK*CLRSDL Trigger: AAGGTCAGAACGAAGGCACCATTTCCGTAGTTGAAG...CTCATCGTCAGATGTGTCCTTCATGTCCAGAGGCTGCTGCCTCAGGCCTTCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CCA 90 bp | CAAAGGCACAGTGTGAGATGTGCAAGGAGTGGCCAGGCGATGAGCAGGTGGACTCTTCAACTACGGAAATaGTGCCTTCGTTCTGACCTT | + |
|
Preference number: 4 (lower is better) Translates to: QRHSVRCARSGQAMSRWTLQLRK*CLRSDL Trigger: AAGGTCAGAACGAAGGCACCATTTCCGTAGTTGAAG...AGTCCACCTGCTCATCGCCTGGCCACTCCTTGCACATCTCACACTGTGCCTTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CCA 90 bp | GTAACCTGCTGGAGCGAAACTGCCTGGGCCACAGGTCAGACTAACTGTGTCAGCCTTCAACTACGGAAATaGTGCCTTCGTTCTGACCTT | + |
|
Preference number: 4 (lower is better) Translates to: VTCWSETAWATGQTNCVSLQLRK*CLRSDL Trigger: AAGGTCAGAACGAAGGCACCATTTCCGTAGTTGAAG...GCTGACACAGTTAGTCTGACCTGTGGCCCAGGCAGTTTCGCTCCAGCAGGTTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CCA 90 bp | CTACAAGAGGCACAAGGTCTTTGGTGGGAACAGAGGAGAGTCCTCAAATGCTACTGTGTAACTACCATCTaGGCTGCTCTCCCGGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LQEAQGLWWEQRRVLKCYCVTTI*AALPVL Trigger: CAGGACCGGGAGAGCAGCCCAGATGGTAGTTACACA...GTAGCATTTGAGGACTCTCCTCTGTTCCCACCAAAGACCTTGTGCCTCTTGTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113564.9 |
||
| CDS-3UTR TCA 90 bp | CCGGTCCTGGGACAACGCATCTGCAATAAGACAGAGGCCATGGCAAAGACTCCAAAACCTCCTCTTACTTaGCTCCAGTTGCTTCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: PVLGQRICNKTEAMAKTPKPPLT*LQLLPT Trigger: TGTTGGAAGCAACTGGAGTCAAGTAAGAGGAGGTTT...TGGAGTCTTTGCCATGGCCTCTGTCTTATTGCAGATGCGTTGTCCCAGGACCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113552.9 |
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| CDS-3UTR TCA 90 bp | GGGACACTCAGACAAGAAATGGGTAACACAGGAAACCCGAGCTGCAACGTCAGGATTTGCTGGCGTATCTaGGCTTGTTGTCGTGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GTLRQEMGNTGNPSCNVRICWRI*ACCRAF Trigger: AAAGGCACGACAACAAGCTCAGATACGCCAGCAAAT...CCTGACGTTGCAGCTCGGGTTTCCTGTGTTACCCATTTCTTGTCTGAGTGTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| CDS-3UTR TCA 90 bp | AGGTCAGTGATGTTAGTGTGGGTGACCCGGTCCTGGGACAACGCATCTGCAATAATTTGCTGGCGTATCTaGGCTTGTTGTCGTGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RSVMLVWVTRSWDNASAIICWRI*ACCRAF Trigger: AAAGGCACGACAACAAGCTCAGATACGCCAGCAAAT...TATTGCAGATGCGTTGTCCCAGGACCGGGTCACCCACACTAACATCACTGACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113552.9 |
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| CDS-3UTR TCA 90 bp | GCACAACTGGCCCTCCTTGTCAGAATTTTGTTAGTCACCAGGAAACCAGGGGTGCCCATTGCTCCTGGTTaGATCTCTGCAGGATTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: AQLALLVRILLVTRKPGVPIAPG*ISAGLR Trigger: CCTTAATCCTGCAGAGATTCAACCAGGAGCAATGGG...CACCCCTGGTTTCCTGGTGACTAACAAAATTCTGACAAGGAGGGCCAGTTGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR TCA 90 bp | AACCAGTTTAAGCCAGAGGTAAACACGTCCACATCTAAGCTAACGCAGTTCGATCCAGGCACTTCCCGATaGTGGGTATCACCTGCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: NQFKPEVNTSTSKLTQFDPGTSR*WVSPAG Trigger: ACCGGCAGGTGATACCCATCATCGGGAAGTGCCTGG...ATCGAACTGCGTTAGCTTAGATGTGGACGTGTTTACCTCTGGCTTAAACTGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113552.9 |
||
| CDS-3UTR GCA 90 bp | CTAGGTCTTCCTCATGTGAGTCCTGAACAGCCTCACAGGGGTCCCAGAGGGCAGTTACTTGACTCCAGTTaGTTCCAACACGTTTCTATG | + |
|
Preference number: 4 (lower is better) Translates to: LGLPHVSPEQPHRGPRGQLLDSS*FQHVSM Trigger: CATAGAAACGTGTTGGAAGCAACTGGAGTCAAGTAA...CTGCCCTCTGGGACCCCTGTGAGGCTGTTCAGGACTCACATGAGGAAGACCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR GCA 90 bp | CAGTTGACAAAGGCACAGTGTGAGATGTGCAAGGAGTGGCCAGGCGATGAGCAGTGTTGTCTGACACTGTaGGTTTCATTGGCTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QLTKAQCEMCKEWPGDEQCCLTL*VSLAVC Trigger: ACACACAGCCAATGAAACGCACAGTGTCAGACAACA...CTGCTCATCGCCTGGCCACTCCTTGCACATCTCACACTGTGCCTTTGTCAACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR GCA 90 bp | GGTAAATGTCACGTTCCTTTTATTTCCATCTCTAAGTCATCTGCAGGGCAGGTTGGGGCCAGGACCTTGTaGTCGCTCTCCTGGCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GKCHVPFISISKSSAGQVGARTL*SLSWLC Trigger: GCAAAGCCAGGAGAGCGAGCACAAGGTCCTGGCCCC...AACCTGCCCTGCAGATGACTTAGAGATGGAAATAAAAGGAACGTGACATTTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 |
||
| CDS-3UTR GCA 90 bp | GGGGCTTGTGGCCAAAGCCTTGAGTACTTCTGTACCAGGAAAGGAGAGAGTGGCCAACTACGGAAATGGTaGCTTCGTTCTGACCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: GACGQSLEYFCTRKGESGQLRKW*LRSDLQ Trigger: TTGAAGGTCAGAACGAAGGCACCATTTCCGTAGTTG...GCCACTCTCTCCTTTCCTGGTACAGAAGTACTCAAGGCTTTGGCCACAAGCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| CDS-3UTR GCA 90 bp | TTGCTCTCTGCTGACCTCTTGAAGGCCTGTAACAGCCACAGTGGTGGGGAGAGACAACTACGGAAATGGTaGCTTCGTTCTGACCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LLSADLLKACNSHSGGERQLRKW*LRSDLQ Trigger: TTGAAGGTCAGAACGAAGGCACCATTTCCGTAGTTG...TCTCTCCCCACCACTGTGGCTGTTACAGGCCTTCAAGAGGTCAGCAGAGAGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073879.12 ENSMUST00000128500.8 |
||
| CDS-3UTR CCA 90 bp | TGTGAGGTCAGTGATGTTAGTGTGGGTGACCCGGTCCTGGGACAACGCATCTGCTATTCCCATTGCTCCTaGTTGAATCTCTGCAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: CEVSDVSVGDPVLGQRICYSHCS*LNLCRI Trigger: AATCCTGCAGAGATTCAACCAGGAGCAATGGGAATA...GCAGATGCGTTGTCCCAGGACCGGGTCACCCACACTAACATCACTGACCTCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113552.9 |
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| CDS-3UTR CCA 90 bp | AGTCGCTTGCTCTCTGCTGACCTCTTGAAGGCCTGTAACAGCCACAGTGGTGGGTTTTCTGGAAGATGTTaGGGATGTGGGTATGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: SRLLSADLLKACNSHSGGFSGRC*GCGYGS Trigger: ACTACCATACCCACATCCCCAACATCTTCCAGAAAA...CCCACCACTGTGGCTGTTACAGGCCTTCAAGAGGTCAGCAGAGAGCAAGCGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| CDS-3UTR CCA 90 bp | TGTGAGGTCAGTGATGTTAGTGTGGGTGACCCGGTCCTGGGACAACGCATCTGCTTTTCTGGAAGATGTTaGGGATGTGGGTATGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: CEVSDVSVGDPVLGQRICFSGRC*GCGYGS Trigger: ACTACCATACCCACATCCCCAACATCTTCCAGAAAA...GCAGATGCGTTGTCCCAGGACCGGGTCACCCACACTAACATCACTGACCTCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113552.9 |
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| CDS-3UTR CCA 90 bp | CTAGGTCTTCCTCATGTGAGTCCTGAACAGCCTCACAGGGGTCCCAGAGGGCAGATCTCTTGTATTTTCTaGAAGATGTTGGGGATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LGLPHVSPEQPHRGPRGQISCIF*KMLGMW Trigger: CCACATCCCCAACATCTTCCAGAAAATACAAGAGAT...CTGCCCTCTGGGACCCCTGTGAGGCTGTTCAGGACTCACATGAGGAAGACCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CCA 90 bp | GTCAGCACTTCCACAAACCGTGGACAAAGCACAGGCCCAACCCTGAGGACCTGCATCTCTTGTATTTTCTaGAAGATGTTGGGGATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VSTSTNRGQSTGPTLRTCISCIF*KMLGMW Trigger: CCACATCCCCAACATCTTCCAGAAAATACAAGAGAT...GCAGGTCCTCAGGGTTGGGCCTGTGCTTTGTCCACGGTTTGTGGAAGTGCTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| CDS-3UTR CCA 90 bp | GTAACCTGCTGGAGCGAAACTGCCTGGGCCACAGGTCAGACTAACTGTGTCAGCCACTGTGCGTTTCATTaGCTGTGTGTAATCTTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: VTCWSETAWATGQTNCVSHCAFH*LCVIFE Trigger: TTCGAAGATTACACACAGCCAATGAAACGCACAGTG...GCTGACACAGTTAGTCTGACCTGTGGCCCAGGCAGTTTCGCTCCAGCAGGTTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CCA 90 bp | CCAGAGCCAGTACAGTTCCACAGGATGTCCACGGCAGACCGACTTTCTCAGAGAGTTTTTCTTGATGAATaGCCAGAGCTTGCCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PEPVQFHRMSTADRLSQRVFLDE*PELASG Trigger: TCCAGAGGCAAGCTCTGGCCATTCATCAAGAAAAAC...TCTCTGAGAAAGTCGGTCTGCCGTGGACATCCTGTGGAACTGTACTGGCTCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| CDS-3UTR CCA 90 bp | GGGGCTTGTGGCCAAAGCCTTGAGTACTTCTGTACCAGGAAAGGAGAGAGTGGCGTTTTTCTTGATGAATaGCCAGAGCTTGCCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GACGQSLEYFCTRKGESGVFLDE*PELASG Trigger: TCCAGAGGCAAGCTCTGGCCATTCATCAAGAAAAAC...GCCACTCTCTCCTTTCCTGGTACAGAAGTACTCAAGGCTTTGGCCACAAGCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| CDS-3UTR CCA 90 bp | ATGACAGCTGGGTGCTCAGTCCACCTGATGCACAACTGGCCCTCCTTGTCAGAAGTTTTTCTTGATGAATaGCCAGAGCTTGCCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: MTAGCSVHLMHNWPSLSEVFLDE*PELASG Trigger: TCCAGAGGCAAGCTCTGGCCATTCATCAAGAAAAAC...TTCTGACAAGGAGGGCCAGTTGTGCATCAGGTGGACTGAGCACCCAGCTGTCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| CDS-3UTR CCA 90 bp | GGGGAGGAGGCGGGGCCAAGAAAGCCTGAAGCTAATCCTTGCTTGCTCTTGAAAGTTTTTCTTGATGAATaGCCAGAGCTTGCCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GEEAGPRKPEANPCLLLKVFLDE*PELASG Trigger: TCCAGAGGCAAGCTCTGGCCATTCATCAAGAAAAAC...TTTCAAGAGCAAGCAAGGATTAGCTTCAGGCTTTCTTGGCCCCGCCTCCTCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| CDS-3UTR CCA 90 bp | GCACAACTGGCCCTCCTTGTCAGAATTTTGTTAGTCACCAGGAAACCAGGGGTGGTGATGGCATCTCTCTaGTCCGTCTCCTTCTGTATC | + |
|
Preference number: 4 (lower is better) Translates to: AQLALLVRILLVTRKPGVVMASL*SVSFCI Trigger: GATACAGAAGGAGACGGACCAGAGAGATGCCATCAC...CACCCCTGGTTTCCTGGTGACTAACAAAATTCTGACAAGGAGGGCCAGTTGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| CDS-3UTR CCA 90 bp | CTGAGTCGCTTGCTCTCTGCTGACCTCTTGAAGGCCTGTAACAGCCACAGTGGTCTTCAACTACGGAAATaGTGCCTTCGTTCTGACCTT | + |
|
Preference number: 4 (lower is better) Translates to: LSRLLSADLLKACNSHSGLQLRK*CLRSDL Trigger: AAGGTCAGAACGAAGGCACCATTTCCGTAGTTGAAG...ACCACTGTGGCTGTTACAGGCCTTCAAGAGGTCAGCAGAGAGCAAGCGACTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073879.12 ENSMUST00000128500.8 |
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| 3UTR CAA 72 bp | ACAGCCTTCCACTTAAAAGGGAACATGTTGAGTCCATaGCTTGCAACGGCTGACACACCAGGCTCTGTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: TAFHLKGNMLSP*LATADTPGSVR Trigger: GCGAACAGAGCCTGGTGTGTCAGCCGTTGCAAGCAATGGACTCAACATGTTCCCTTTTAAGTGGAAGGCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
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| CDS-3UTR TCA 90 bp | AAGGCCTGTAACAGCCACAGTGGTGGGGAGAGACAACTCCAATGCTTTTTGTTTTCCAAGTTGTCAAACTaGTCCCAGAGCTCAGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KACNSHSGGERQLQCFLFSKLSN*SQSSVP Trigger: GGGCACTGAGCTCTGGGATCAGTTTGACAACTTGGA...AAACAAAAAGCATTGGAGTTGTCTCTCCCCACCACTGTGGCTGTTACAGGCCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
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| CDS-3UTR TCA 90 bp | GGGACACTCAGACAAGAAATGGGTAACACAGGAAACCCGAGCTGCAACGTCAGGAAACCTCCTCTTACTTaGCTCCAGTTGCTTCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: GTLRQEMGNTGNPSCNVRKPPLT*LQLLPT Trigger: TGTTGGAAGCAACTGGAGTCAAGTAAGAGGAGGTTT...CCTGACGTTGCAGCTCGGGTTTCCTGTGTTACCCATTTCTTGTCTGAGTGTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
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| CDS-3UTR GCA 90 bp | ATGACAGCTGGGTGCTCAGTCCACCTGATGCACAACTGGCCCTCCTTGTCAGAATGGAAAGAAAGGCTTTaGAAGCCGTGTACTTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: MTAGCSVHLMHNWPSLSEWKERL*KPCTCT Trigger: AGTACAAGTACACGGCTTGCAAAGCCTTTCTTTCCA...TTCTGACAAGGAGGGCCAGTTGTGCATCAGGTGGACTGAGCACCCAGCTGTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| CDS-3UTR GCA 90 bp | CTAGCCGGTGGCAGTTCTGTACACAGCCAAGTTGGACAAGCGAACCCAGGCACATTACTTGACTCCAGTTaGTTCCAACACGTTTCTATG | + |
|
Preference number: 4 (lower is better) Translates to: LAGGSSVHSQVGQANPGTLLDSS*FQHVSM Trigger: CATAGAAACGTGTTGGAAGCAACTGGAGTCAAGTAA...TGTGCCTGGGTTCGCTTGTCCAACTTGGCTGTGTACAGAACTGCCACCGGCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073879.12 ENSMUST00000128500.8 |
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| CDS-3UTR GCA 90 bp | TGGACATTCTACGTTCACTACAGATGCCACCAGAAGGCATTAATGGCCTCCCTGCTGAGCTTGTTGTCGTaGCTTTTCCACATCCGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: WTFYVHYRCHQKALMASLLSLLS*LFHIRL Trigger: AAGGCGGATGTGGAAAAGGCACGACAACAAGCTCAG...CAGGGAGGCCATTAATGCCTTCTGGTGGCATCTGTAGTGAACGTAGAATGTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 |
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| CDS-3UTR GCA 90 bp | CTCTCCATTTTACCTTTGTGGCAAGTCTTTCCTTGTCCTTCATGCATTAATGAGGGGGCCAGGACCTTGTaGTCGCTCTCCTGGCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LSILPLWQVFPCPSCINEGARTL*SLSWLC Trigger: GCAAAGCCAGGAGAGCGAGCACAAGGTCCTGGCCCC...CTCATTAATGCATGAAGGACAAGGAAAGACTTGCCACAAAGGTAAAATGGAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| CDS-3UTR CCA 90 bp | GAGTGTCTGAGTCGCTTGCTCTCTGCTGACCTCTTGAAGGCCTGTAACAGCCACTATTCCCATTGCTCCTaGTTGAATCTCTGCAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: ECLSRLLSADLLKACNSHYSHCS*LNLCRI Trigger: AATCCTGCAGAGATTCAACCAGGAGCAATGGGAATA...GTGGCTGTTACAGGCCTTCAAGAGGTCAGCAGAGAGCAAGCGACTCAGACACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| CDS-3UTR CCA 90 bp | CCAGAGCCAGTACAGTTCCACAGGATGTCCACGGCAGACCGACTTTCTCAGAGATATTCCCATTGCTCCTaGTTGAATCTCTGCAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: PEPVQFHRMSTADRLSQRYSHCS*LNLCRI Trigger: AATCCTGCAGAGATTCAACCAGGAGCAATGGGAATA...TCTCTGAGAAAGTCGGTCTGCCGTGGACATCCTGTGGAACTGTACTGGCTCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CCA 90 bp | CCAGAGCCAGTACAGTTCCACAGGATGTCCACGGCAGACCGACTTTCTCAGAGATTTTCTGGAAGATGTTaGGGATGTGGGTATGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: PEPVQFHRMSTADRLSQRFSGRC*GCGYGS Trigger: ACTACCATACCCACATCCCCAACATCTTCCAGAAAA...TCTCTGAGAAAGTCGGTCTGCCGTGGACATCCTGTGGAACTGTACTGGCTCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| CDS-3UTR CCA 90 bp | CTCTCCATTTTACCTTTGTGGCAAGTCTTTCCTTGTCCTTCATGCATTAATGAGGGCTGCTTGGGAGACTaGGGGCCGTTGGGAACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSILPLWQVFPCPSCINEGCLGD*GPLGTA Trigger: TGCTGTTCCCAACGGCCCCCAGTCTCCCAAGCAGCC...CTCATTAATGCATGAAGGACAAGGAAAGACTTGCCACAAAGGTAAAATGGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113559.10 ENSMUST00000113560.8 |
||
| 3UTR CAA 72 bp | TCGCTCAAGGAGTGCACCATCCTGGGCCTCTTTTGGTaGTTTGGGACACTCAGACAAGAAATGGGTAACACA | + |
|
Preference number: 4 (lower is better) Translates to: SLKECTILGLFW*FGTLRQEMGNT Trigger: TGTGTTACCCATTTCTTGTCTGAGTGTCCCAAACAACCAAAAGAGGCCCAGGATGGTGCACTCCTTGAGCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| 3UTR CAA 72 bp | GGTTTTGTAAGACTTCCCTGTCTTTCATCCTCTGACTaGATGCTAAGCTACCAACTGCCCAGAGGGAGACGC | + |
|
Preference number: 4 (lower is better) Translates to: GFVRLPCLSSSD*MLSYQLPRGRR Trigger: GCGTCTCCCTCTGGGCAGTTGGTAGCTTAGCATCAAGTCAGAGGATGAAAGACAGGGAAGTCTTACAAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR TCA 90 bp | TGGACATTCTACGTTCACTACAGATGCCACCAGAAGGCATTAATGGCCTCCCTGATTTGCTGGCGTATCTaGGCTTGTTGTCGTGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: WTFYVHYRCHQKALMASLICWRI*ACCRAF Trigger: AAAGGCACGACAACAAGCTCAGATACGCCAGCAAAT...CAGGGAGGCCATTAATGCCTTCTGGTGGCATCTGTAGTGAACGTAGAATGTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 |
||
| CDS-3UTR TCA 90 bp | GCAGAAGATCATGACCCAAAGCTCATGCAGACAGTGACATGCAATCTAGGCTCTCCCATTGCTCCTGGTTaGATCTCTGCAGGATTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: AEDHDPKLMQTVTCNLGSPIAPG*ISAGLR Trigger: CCTTAATCCTGCAGAGATTCAACCAGGAGCAATGGG...AGAGCCTAGATTGCATGTCACTGTCTGCATGAGCTTTGGGTCATGATCTTCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113552.9 |
||
| CDS-3UTR TCA 90 bp | GGTAAATGTCACGTTCCTTTTATTTCCATCTCTAAGTCATCTGCAGGGCAGGTTCAGGCCTCAAACTTCTaGGCCTCCAGCCGCAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GKCHVPFISISKSSAGQVQASNF*ASSRSF Trigger: GAAACTGCGGCTGGAGGCTCAGAAGTTTGAGGCCTG...AACCTGCCCTGCAGATGACTTAGAGATGGAAATAAAAGGAACGTGACATTTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 |
||
| CDS-3UTR GCA 90 bp | GCAGAAGATCATGACCCAAAGCTCATGCAGACAGTGACATGCAATCTAGGCTCTCTGAGCTTGTTGTCGTaGCTTTTCCACATCCGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: AEDHDPKLMQTVTCNLGSLSLLS*LFHIRL Trigger: AAGGCGGATGTGGAAAAGGCACGACAACAAGCTCAG...AGAGCCTAGATTGCATGTCACTGTCTGCATGAGCTTTGGGTCATGATCTTCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113552.9 |
||
| CDS-3UTR GCA 90 bp | TCACAGGGGCTTGTGGCCAAAGCCTTGAGTACTTCTGTACCAGGAAAGGAGAGATGTTGTCTGACACTGTaGGTTTCATTGGCTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SQGLVAKALSTSVPGKERCCLTL*VSLAVC Trigger: ACACACAGCCAATGAAACGCACAGTGTCAGACAACA...TCTCTCCTTTCCTGGTACAGAAGTACTCAAGGCTTTGGCCACAAGCCCCTGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR GCA 90 bp | TCTAACTTGGAGTCTTATAGATGTCAACGATTAAACAGCCTTCCACTTAAAAGGCTCTGCCGGCGTGCCTaGTCACTCCGAGCTGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SNLESYRCQRLNSLPLKRLCRRA*SLRAGS Trigger: ACTCCCAGCTCGGAGTGAGCAGGCACGCCGGCAGAG...CCTTTTAAGTGGAAGGCTGTTTAATCGTTGACATCTATAAGACTCCAAGTTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| CDS-3UTR CCA 90 bp | GCACAACTGGCCCTCCTTGTCAGAATTTTGTTAGTCACCAGGAAACCAGGGGTGGTTTTTCTTGATGAATaGCCAGAGCTTGCCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: AQLALLVRILLVTRKPGVVFLDE*PELASG Trigger: TCCAGAGGCAAGCTCTGGCCATTCATCAAGAAAAAC...CACCCCTGGTTTCCTGGTGACTAACAAAATTCTGACAAGGAGGGCCAGTTGTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CCA 90 bp | TCTGGTTTTGTAAGACTTCCCTGTCTTTCATCCTCTGACTTGATGCTAAGCTACACTTCGGTGAGCTTCTaGTCCAGGCTGGCTGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SGFVRLPCLSSSDLMLSYTSVSF*SRLAGS Trigger: AGACCCAGCCAGCCTGGACCAGAAGCTCACCGAAGT...GTAGCTTAGCATCAAGTCAGAGGATGAAAGACAGGGAAGTCTTACAAAACCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CCA 90 bp | TCTGGTTTTGTAAGACTTCCCTGTCTTTCATCCTCTGACTTGATGCTAAGCTACGCAGGTCCCTATGGCTaGAAGCGGCTCCTCATCATC | + |
|
Preference number: 4 (lower is better) Translates to: SGFVRLPCLSSSDLMLSYAGPYG*KRLLII Trigger: GATGATGAGGAGCCGCTTCCAGCCATAGGGACCTGC...GTAGCTTAGCATCAAGTCAGAGGATGAAAGACAGGGAAGTCTTACAAAACCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| 3UTR CAA 72 bp | TCAAGGAGTGCACCATCCTGGGCCTCTTTTGGTTGTTaGGGACACTCAGACAAGAAATGGGTAACACAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SRSAPSWASFGC*GHSDKKWVTQE Trigger: TTCCTGTGTTACCCATTTCTTGTCTGAGTGTCCCAAACAACCAAAAGAGGCCCAGGATGGTGCACTCCTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| 3UTR CAA 72 bp | CACCGTAAGGCAAAGGGTTGGAGGAGTCTAAGGAGTTaGGCAATGGTTAGGCACATCATTGATACCAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: HRKAKGWRSLRS*AMVRHIIDTRE Trigger: CTCTCTGGTATCAATGATGTGCCTAACCATTGCCAAACTCCTTAGACTCCTCCAACCCTTTGCCTTACGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| CDS-3UTR TCA 90 bp | TGGACATTCTACGTTCACTACAGATGCCACCAGAAGGCATTAATGGCCTCCCTGAAACCTCCTCTTACTTaGCTCCAGTTGCTTCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: WTFYVHYRCHQKALMASLKPPLT*LQLLPT Trigger: TGTTGGAAGCAACTGGAGTCAAGTAAGAGGAGGTTT...CAGGGAGGCCATTAATGCCTTCTGGTGGCATCTGTAGTGAACGTAGAATGTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 |
||
| CDS-3UTR TCA 90 bp | CTACAAGAGGCACAAGGTCTTTGGTGGGAACAGAGGAGAGTCCTCAAATGCTACAAACCTCCTCTTACTTaGCTCCAGTTGCTTCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: LQEAQGLWWEQRRVLKCYKPPLT*LQLLPT Trigger: TGTTGGAAGCAACTGGAGTCAAGTAAGAGGAGGTTT...GTAGCATTTGAGGACTCTCCTCTGTTCCCACCAAAGACCTTGTGCCTCTTGTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR TCA 90 bp | CTCTCCATTTTACCTTTGTGGCAAGTCTTTCCTTGTCCTTCATGCATTAATGAGCAGGCCTCAAACTTCTaGGCCTCCAGCCGCAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LSILPLWQVFPCPSCINEQASNF*ASSRSF Trigger: GAAACTGCGGCTGGAGGCTCAGAAGTTTGAGGCCTG...CTCATTAATGCATGAAGGACAAGGAAAGACTTGCCACAAAGGTAAAATGGAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR GCA 90 bp | TCACAGGGGCTTGTGGCCAAAGCCTTGAGTACTTCTGTACCAGGAAAGGAGAGATGGAAAGAAAGGCTTTaGAAGCCGTGTACTTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: SQGLVAKALSTSVPGKERWKERL*KPCTCT Trigger: AGTACAAGTACACGGCTTGCAAAGCCTTTCTTTCCA...TCTCTCCTTTCCTGGTACAGAAGTACTCAAGGCTTTGGCCACAAGCCCCTGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR GCA 90 bp | AAATGTCACGTTCCTTTTATTTCCATCTCTAAGTCATCTGCAGGGCAGGTTCTTCTGCCGGTCCACCTCTaGGTACGTCTTCATGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: KCHVPFISISKSSAGQVLLPVHL*VRLHGL Trigger: GAGTCCATGAAGACGTACGCAGAGGTGGACCGGCAG...AAGAACCTGCCCTGCAGATGACTTAGAGATGGAAATAAAAGGAACGTGACATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR GCA 90 bp | CTACAAGAGGCACAAGGTCTTTGGTGGGAACAGAGGAGAGTCCTCAAATGCTACTGTTGTCTGACACTGTaGGTTTCATTGGCTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LQEAQGLWWEQRRVLKCYCCLTL*VSLAVC Trigger: ACACACAGCCAATGAAACGCACAGTGTCAGACAACA...GTAGCATTTGAGGACTCTCCTCTGTTCCCACCAAAGACCTTGTGCCTCTTGTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CCA 90 bp | TCACAGGGGCTTGTGGCCAAAGCCTTGAGTACTTCTGTACCAGGAAAGGAGAGATTTTCTGGAAGATGTTaGGGATGTGGGTATGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: SQGLVAKALSTSVPGKERFSGRC*GCGYGS Trigger: ACTACCATACCCACATCCCCAACATCTTCCAGAAAA...TCTCTCCTTTCCTGGTACAGAAGTACTCAAGGCTTTGGCCACAAGCCCCTGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CCA 90 bp | GCAGAAGATCATGACCCAAAGCTCATGCAGACAGTGACATGCAATCTAGGCTCTTGCCTTCTTTGGAGCTaGAAAGGCTGTTGTCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: AEDHDPKLMQTVTCNLGSCLLWS*KGCCLT Trigger: TGTCAGACAACAGCCTTTCCAGCTCCAAAGAAGGCA...AGAGCCTAGATTGCATGTCACTGTCTGCATGAGCTTTGGGTCATGATCTTCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113552.9 |
||
| CDS-3UTR GCA 90 bp | AACCAGTTTAAGCCAGAGGTAAACACGTCCACATCTAAGCTAACGCAGTTCGATTGCTTTGCTGTCCTCTaGCATTTGCTGGCGTATCTG | + |
|
Preference number: 4 (lower is better) Translates to: NQFKPEVNTSTSKLTQFDCFAVL*HLLAYL Trigger: CAGATACGCCAGCAAATGGCAGAGGACAGCAAAGCA...ATCGAACTGCGTTAGCTTAGATGTGGACGTGTTTACCTCTGGCTTAAACTGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113552.9 |
||
| CDS-3UTR GCA 90 bp | GCAGAAGATCATGACCCAAAGCTCATGCAGACAGTGACATGCAATCTAGGCTCTTGTTGTCTGACACTGTaGGTTTCATTGGCTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: AEDHDPKLMQTVTCNLGSCCLTL*VSLAVC Trigger: ACACACAGCCAATGAAACGCACAGTGTCAGACAACA...AGAGCCTAGATTGCATGTCACTGTCTGCATGAGCTTTGGGTCATGATCTTCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113552.9 |
||
| CDS-3UTR GCA 90 bp | TCTGGTTTTGTAAGACTTCCCTGTCTTTCATCCTCTGACTTGATGCTAAGCTACCTTCATTTCTGCGGATaGGAGTCCACCCATCGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SGFVRLPCLSSSDLMLSYLHFCG*ESTHRL Trigger: AAGGCGATGGGTGGACTCGCATCCGCAGAAATGAAG...GTAGCTTAGCATCAAGTCAGAGGATGAAAGACAGGGAAGTCTTACAAAACCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR GCA 90 bp | GGTAAATGTCACGTTCCTTTTATTTCCATCTCTAAGTCATCTGCAGGGCAGGTTCCTCGTCTTCATTTCTaGGGATGCGAGTCCACCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GKCHVPFISISKSSAGQVPRLHF*GCESTH Trigger: ATGGGTGGACTCGCATCCGCAGAAATGAAGACGAGG...AACCTGCCCTGCAGATGACTTAGAGATGGAAATAAAAGGAACGTGACATTTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 |
||
| CDS-3UTR CCA 90 bp | GCAGAAGATCATGACCCAAAGCTCATGCAGACAGTGACATGCAATCTAGGCTCTGTTTTTCTTGATGAATaGCCAGAGCTTGCCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: AEDHDPKLMQTVTCNLGSVFLDE*PELASG Trigger: TCCAGAGGCAAGCTCTGGCCATTCATCAAGAAAAAC...AGAGCCTAGATTGCATGTCACTGTCTGCATGAGCTTTGGGTCATGATCTTCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113552.9 |
||
| CDS-3UTR CCA 90 bp | GGTAAATGTCACGTTCCTTTTATTTCCATCTCTAAGTCATCTGCAGGGCAGGTTAGGCTCCGGAAGCAGTaGATTTTGGGTTTGGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GKCHVPFISISKSSAGQVRLRKQ*ILGLEV Trigger: GACCTCCAAACCCAAAATCCACTGCTTCCGGAGCCT...AACCTGCCCTGCAGATGACTTAGAGATGGAAATAAAAGGAACGTGACATTTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113559.10 ENSMUST00000113560.8 |
||
| CDS-3UTR TCA 90 bp | AAATGTCACGTTCCTTTTATTTCCATCTCTAAGTCATCTGCAGGGCAGGTTCTTTCCAAGTTGTCAAACTaGTCCCAGAGCTCAGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KCHVPFISISKSSAGQVLSKLSN*SQSSVP Trigger: GGGCACTGAGCTCTGGGATCAGTTTGACAACTTGGA...AAGAACCTGCCCTGCAGATGACTTAGAGATGGAAATAAAAGGAACGTGACATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| CDS-3UTR TCA 90 bp | GAGTGCTCTCTACTGAAAGCACTTTGTTTGGTTTTAATTCCACCTCCAGAGTCACCCATTGCTCCTGGTTaGATCTCTGCAGGATTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: ECSLLKALCLVLIPPPESPIAPG*ISAGLR Trigger: CCTTAATCCTGCAGAGATTCAACCAGGAGCAATGGG...TGACTCTGGAGGTGGAATTAAAACCAAACAAAGTGCTTTCAGTAGAGAGCACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 |
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| CDS-3UTR GCA 90 bp | TCTGGTTTTGTAAGACTTCCCTGTCTTTCATCCTCTGACTTGATGCTAAGCTACCTGAGCTTGTTGTCGTaGCTTTTCCACATCCGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SGFVRLPCLSSSDLMLSYLSLLS*LFHIRL Trigger: AAGGCGGATGTGGAAAAGGCACGACAACAAGCTCAG...GTAGCTTAGCATCAAGTCAGAGGATGAAAGACAGGGAAGTCTTACAAAACCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR GCA 90 bp | GAGTGCTCTCTACTGAAAGCACTTTGTTTGGTTTTAATTCCACCTCCAGAGTCACTGAGCTTGTTGTCGTaGCTTTTCCACATCCGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ECSLLKALCLVLIPPPESLSLLS*LFHIRL Trigger: AAGGCGGATGTGGAAAAGGCACGACAACAAGCTCAG...TGACTCTGGAGGTGGAATTAAAACCAAACAAAGTGCTTTCAGTAGAGAGCACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 |
||
| CDS-3UTR CCA 90 bp | CTACAAGAGGCACAAGGTCTTTGGTGGGAACAGAGGAGAGTCCTCAAATGCTACATCTCTTGTATTTTCTaGAAGATGTTGGGGATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LQEAQGLWWEQRRVLKCYISCIF*KMLGMW Trigger: CCACATCCCCAACATCTTCCAGAAAATACAAGAGAT...GTAGCATTTGAGGACTCTCCTCTGTTCCCACCAAAGACCTTGTGCCTCTTGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CCA 90 bp | AAATGTCACGTTCCTTTTATTTCCATCTCTAAGTCATCTGCAGGGCAGGTTCTTAGGCTCCGGAAGCAGTaGATTTTGGGTTTGGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: KCHVPFISISKSSAGQVLRLRKQ*ILGLEV Trigger: GACCTCCAAACCCAAAATCCACTGCTTCCGGAGCCT...AAGAACCTGCCCTGCAGATGACTTAGAGATGGAAATAAAAGGAACGTGACATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113559.10 ENSMUST00000113560.8 |
||
| CDS-3UTR CCA 90 bp | AAATGTCACGTTCCTTTTATTTCCATCTCTAAGTCATCTGCAGGGCAGGTTCTTGTTGCTGAAGTCTTCTaGTGTGACACCCCCACGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KCHVPFISISKSSAGQVLVAEVF*CDTPTL Trigger: AAGCGTGGGGGTGTCACACCAGAAGACTTCAGCAAC...AAGAACCTGCCCTGCAGATGACTTAGAGATGGAAATAAAAGGAACGTGACATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113559.10 |
||
| 3UTR CAA 72 bp | TTTTCTCATTTCCATCCATTTATTTACAACTGGCTCTaGATGGCCTTGAGGTGGGCTGTCATGATGGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: FSHFHPFIYNWL*MALRWAVMMGT Trigger: GGTGCCCATCATGACAGCCCACCTCAAGGCCATCAAGAGCCAGTTGTAAATAAATGGATGGAAATGAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| CDS-3UTR TCA 90 bp | GAGTGCTCTCTACTGAAAGCACTTTGTTTGGTTTTAATTCCACCTCCAGAGTCAATTTGCTGGCGTATCTaGGCTTGTTGTCGTGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ECSLLKALCLVLIPPPESICWRI*ACCRAF Trigger: AAAGGCACGACAACAAGCTCAGATACGCCAGCAAAT...TGACTCTGGAGGTGGAATTAAAACCAAACAAAGTGCTTTCAGTAGAGAGCACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 |
||
| CDS-3UTR CCA 90 bp | GCAGAAGATCATGACCCAAAGCTCATGCAGACAGTGACATGCAATCTAGGCTCTATCTCTTGTATTTTCTaGAAGATGTTGGGGATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: AEDHDPKLMQTVTCNLGSISCIF*KMLGMW Trigger: CCACATCCCCAACATCTTCCAGAAAATACAAGAGAT...AGAGCCTAGATTGCATGTCACTGTCTGCATGAGCTTTGGGTCATGATCTTCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113552.9 |
||
| CDS-3UTR TCA 90 bp | GATCCAAAGCAAGTAAAACACAAACCATTAATATCGATGCCACGGTACAAAAGATCCAAGTTGTCAAACTaGTCCCAGAGCTCAGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: DPKQVKHKPLISMPRYKRSKLSN*SQSSVP Trigger: GGGCACTGAGCTCTGGGATCAGTTTGACAACTTGGA...TCTTTTGTACCGTGGCATCGATATTAATGGTTTGTGTTTTACTTGCTTTGGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113552.9 |
||
| CDS-3UTR TCA 90 bp | AAATGTCACGTTCCTTTTATTTCCATCTCTAAGTCATCTGCAGGGCAGGTTCTTATTTGCTGGCGTATCTaGGCTTGTTGTCGTGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KCHVPFISISKSSAGQVLICWRI*ACCRAF Trigger: AAAGGCACGACAACAAGCTCAGATACGCCAGCAAAT...AAGAACCTGCCCTGCAGATGACTTAGAGATGGAAATAAAAGGAACGTGACATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR GCA 90 bp | GGTAAATGTCACGTTCCTTTTATTTCCATCTCTAAGTCATCTGCAGGGCAGGTTCAACTACGGAAATGGTaGCTTCGTTCTGACCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: GKCHVPFISISKSSAGQVQLRKW*LRSDLQ Trigger: TTGAAGGTCAGAACGAAGGCACCATTTCCGTAGTTG...AACCTGCCCTGCAGATGACTTAGAGATGGAAATAAAAGGAACGTGACATTTACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 |
||
| CDS-3UTR CCA 90 bp | TCTGGTTTTGTAAGACTTCCCTGTCTTTCATCCTCTGACTTGATGCTAAGCTACCTTCAACTACGGAAATaGTGCCTTCGTTCTGACCTT | + |
|
Preference number: 4 (lower is better) Translates to: SGFVRLPCLSSSDLMLSYLQLRK*CLRSDL Trigger: AAGGTCAGAACGAAGGCACCATTTCCGTAGTTGAAG...GTAGCTTAGCATCAAGTCAGAGGATGAAAGACAGGGAAGTCTTACAAAACCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| 3UTR CAA 72 bp | CATCTGAAGAAGACTGGCAGCCTCTCCATTTTACCTTaGTGGCAAGTCTTTCCTTGTCCTTCATGCATTAAT | + |
|
Preference number: 4 (lower is better) Translates to: HLKKTGSLSILP*WQVFPCPSCIN Trigger: ATTAATGCATGAAGGACAAGGAAAGACTTGCCACAAAGGTAAAATGGAGAGGCTGCCAGTCTTCTTCAGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| 3UTR CAA 72 bp | ATTACATGGGTAAGAGTGCTCTCTACTGAAAGCACTTaGTTTGGTTTTAATTCCACCTCCAGAGTCACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ITWVRVLSTEST*FGFNSTSRVTG Trigger: GCCTGTGACTCTGGAGGTGGAATTAAAACCAAACAAAGTGCTTTCAGTAGAGAGCACTCTTACCCATGTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 |
||
| CDS-3UTR TCA 90 bp | AAATGTCACGTTCCTTTTATTTCCATCTCTAAGTCATCTGCAGGGCAGGTTCTTAAACCTCCTCTTACTTaGCTCCAGTTGCTTCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: KCHVPFISISKSSAGQVLKPPLT*LQLLPT Trigger: TGTTGGAAGCAACTGGAGTCAAGTAAGAGGAGGTTT...AAGAACCTGCCCTGCAGATGACTTAGAGATGGAAATAAAAGGAACGTGACATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR GCA 90 bp | TCACAAAATGTCTGTAATACTGGCCCCAATGCATGGATGTCAGCACTTCCACAATTACTTGACTCCAGTTaGTTCCAACACGTTTCTATG | + |
|
Preference number: 4 (lower is better) Translates to: SQNVCNTGPNAWMSALPQLLDSS*FQHVSM Trigger: CATAGAAACGTGTTGGAAGCAACTGGAGTCAAGTAA...TTGTGGAAGTGCTGACATCCATGCATTGGGGCCAGTATTACAGACATTTTGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR GCA 90 bp | CTCTCCATTTTACCTTTGTGGCAAGTCTTTCCTTGTCCTTCATGCATTAATGAGTGTTGTCTGACACTGTaGGTTTCATTGGCTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LSILPLWQVFPCPSCINECCLTL*VSLAVC Trigger: ACACACAGCCAATGAAACGCACAGTGTCAGACAACA...CTCATTAATGCATGAAGGACAAGGAAAGACTTGCCACAAAGGTAAAATGGAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR GCA 90 bp | AAATGTCACGTTCCTTTTATTTCCATCTCTAAGTCATCTGCAGGGCAGGTTCTTTGTTGTCTGACACTGTaGGTTTCATTGGCTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KCHVPFISISKSSAGQVLCCLTL*VSLAVC Trigger: ACACACAGCCAATGAAACGCACAGTGTCAGACAACA...AAGAACCTGCCCTGCAGATGACTTAGAGATGGAAATAAAAGGAACGTGACATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CCA 90 bp | TCTGGTTTTGTAAGACTTCCCTGTCTTTCATCCTCTGACTTGATGCTAAGCTACTATTCCCATTGCTCCTaGTTGAATCTCTGCAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: SGFVRLPCLSSSDLMLSYYSHCS*LNLCRI Trigger: AATCCTGCAGAGATTCAACCAGGAGCAATGGGAATA...GTAGCTTAGCATCAAGTCAGAGGATGAAAGACAGGGAAGTCTTACAAAACCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CCA 90 bp | TCTGGTTTTGTAAGACTTCCCTGTCTTTCATCCTCTGACTTGATGCTAAGCTACCACTGTGCGTTTCATTaGCTGTGTGTAATCTTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: SGFVRLPCLSSSDLMLSYHCAFH*LCVIFE Trigger: TTCGAAGATTACACACAGCCAATGAAACGCACAGTG...GTAGCTTAGCATCAAGTCAGAGGATGAAAGACAGGGAAGTCTTACAAAACCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR GCA 90 bp | TCTGGTTTTGTAAGACTTCCCTGTCTTTCATCCTCTGACTTGATGCTAAGCTACTTACTTGACTCCAGTTaGTTCCAACACGTTTCTATG | + |
|
Preference number: 4 (lower is better) Translates to: SGFVRLPCLSSSDLMLSYLLDSS*FQHVSM Trigger: CATAGAAACGTGTTGGAAGCAACTGGAGTCAAGTAA...GTAGCTTAGCATCAAGTCAGAGGATGAAAGACAGGGAAGTCTTACAAAACCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CCA 90 bp | AAATGTCACGTTCCTTTTATTTCCATCTCTAAGTCATCTGCAGGGCAGGTTCTTATCTCTTGTATTTTCTaGAAGATGTTGGGGATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KCHVPFISISKSSAGQVLISCIF*KMLGMW Trigger: CCACATCCCCAACATCTTCCAGAAAATACAAGAGAT...AAGAACCTGCCCTGCAGATGACTTAGAGATGGAAATAAAAGGAACGTGACATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| 3UTR CAA 72 bp | GTGCCAGCAATCTCAAAGCCTCTGGTAAATTCTAACTaGGAGTCTTATAGATGTCAACGATTAAACAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VPAISKPLVNSN*ESYRCQRLNSL Trigger: AAGGCTGTTTAATCGTTGACATCTATAAGACTCCAAGTTAGAATTTACCAGAGGCTTTGAGATTGCTGGCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| 3UTR CAA 72 bp | CACTGCTGGACCTCTCTCTTTGAGATGTTTTGGGCTTaGTTTTTAAGACAGGGTCTATCTTATGTAGTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: HCWTSLFEMFWA*FLRQGLSYVVL Trigger: TAGAACTACATAAGATAGACCCTGTCTTAAAAACAAAGCCCAAAACATCTCAAAGAGAGAGGTCCAGCAGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| CDS-3UTR GCA 90 bp | GATCCAAAGCAAGTAAAACACAAACCATTAATATCGATGCCACGGTACAAAAGATTACTTGACTCCAGTTaGTTCCAACACGTTTCTATG | + |
|
Preference number: 4 (lower is better) Translates to: DPKQVKHKPLISMPRYKRLLDSS*FQHVSM Trigger: CATAGAAACGTGTTGGAAGCAACTGGAGTCAAGTAA...TCTTTTGTACCGTGGCATCGATATTAATGGTTTGTGTTTTACTTGCTTTGGATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113552.9 |
||
| CDS CCA 90 bp | GGGCTCTCCCGGTCCTGGGCACAGTTAGTGACCGTCTGGTGTGTCTaGCCATCATACAGTCCACTCTGCCGGCGTGCCTGCTCACTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: GLSRSWAQLVTVWCV*PSYSPLCRRACSLR Trigger: TCGGAGTGAGCAGGCACGCCGGCAGAGTGGACTGTATGATGGCCAGACACACCAGACGGTCACTAACTGTGCCCAGGACCGGGAGAGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000073879.12 ENSMUST00000075326.11 ENSMUST00000100207.9 ENSMUST00000100208.9 ENSMUST00000113555.8 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000128431.3 ENSMUST00000128500.8 |
||
| CDS CCA 90 bp | CCATCTGGGCTGCTCTCCCGGTCCTGGGCACAGTTAGTGACCGTCTaGTGTGTCTGGCCATCATACAGTCCACTCTGCCGGCGTGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PSGLLSRSWAQLVTV*CVWPSYSPLCRRAC Trigger: GCAGGCACGCCGGCAGAGTGGACTGTATGATGGCCAGACACACCAGACGGTCACTAACTGTGCCCAGGACCGGGAGAGCAGCCCAGATGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113564.9 |
||
| CDS-3UTR CAA 90 bp | TGCGAAGGACCACCTCGGTACTCCCCCAAGCTCCACCACTCTAGGAGGGCAACATCCGGGGCCAGGACCTaGTGCTCGCTCTCCTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: CEGPPRYSPKLHHSRRATSGART*CSLSWL Trigger: AAGCCAGGAGAGCGAGCACAAGGTCCTGGCCCCGGA...TGTTGCCCTCCTAGAGTGGTGGAGCTTGGGGGAGTACCGAGGTGGTCCTTCGCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CAA 90 bp | ACCTTGTCAGCTGCTCCCCCACCTTGGTACCCTCCCCTCTGCTCTGAGGTGGTATCCGGGGCCAGGACCTaGTGCTCGCTCTCCTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: TLSAAPPPWYPPLCSEVVSGART*CSLSWL Trigger: AAGCCAGGAGAGCGAGCACAAGGTCCTGGCCCCGGA...TACCACCTCAGAGCAGAGGGGAGGGTACCAAGGTGGGGGAGCAGCTGACAAGGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CAA 90 bp | AAAGGTGCGAAGGACCACCTCGGTACTCCCCCAAGCTCCACCACTCTAGGAGGGGGAGACTGGGGGCCGTaGGGAACAGCAGAGGGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: KGAKDHLGTPPSSTTLGGGDWGP*GTAEGE Trigger: CTCACCCTCTGCTGTTCCCAACGGCCCCCAGTCTCC...CCCTCCTAGAGTGGTGGAGCTTGGGGGAGTACCGAGGTGGTCCTTCGCACCTTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000113559.10 ENSMUST00000113560.8 |
||
| CDS GCA 90 bp | GTCTGGTGTGTCTGGCCATCATACAGTCCACTCTGCCGGCGTGCCTaGTCACTCCGAGCTGGGAGTCTGCCTTCTACCTCAGCCAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VWCVWPSYSPLCRRA*SLRAGSLPSTSASQ Trigger: CTGGCTGGCTGAGGTAGAAGGCAGACTCCCAGCTCGGAGTGAGCAGGCACGCCGGCAGAGTGGACTGTATGATGGCCAGACACACCAGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENSMUST00000073879.12 ENSMUST00000075326.11 ENSMUST00000100207.9 ENSMUST00000100208.9 ENSMUST00000113555.8 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 ENSMUST00000128431.3 ENSMUST00000128500.8 |
||
| CDS GCA 90 bp | GACCGTCTGGTGTGTCTGGCCATCATACAGTCCACTCTGCCGGCGTaGCTGCTCACTCCGAGCTGGGAGTCTGCCTTCTACCTCAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: DRLVCLAIIQSTLPA*LLTPSWESAFYLSQ Trigger: CTGGCTGAGGTAGAAGGCAGACTCCCAGCTCGGAGTGAGCAGGCACGCCGGCAGAGTGGACTGTATGATGGCCAGACACACCAGACGGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENSMUST00000073879.12 ENSMUST00000075326.11 ENSMUST00000100207.9 ENSMUST00000100208.9 ENSMUST00000113555.8 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 ENSMUST00000128431.3 ENSMUST00000128500.8 |
||
| CDS CCA 90 bp | CTACCATCTGGGCTCTCCCGGTCCTGGGCACAGTTAGTGACCGTCTaGTGTGTCTGGCCATCATACAGTCCACTCTGCCGGCGTGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LPSGLSRSWAQLVTV*CVWPSYSPLCRRAC Trigger: GCAGGCACGCCGGCAGAGTGGACTGTATGATGGCCAGACACACCAGACGGTCACTAACTGTGCCCAGGACCGGGAGAGCCCAGATGGTAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000073879.12 ENSMUST00000075326.11 ENSMUST00000100207.9 ENSMUST00000100208.9 ENSMUST00000113555.8 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000128431.3 ENSMUST00000128500.8 |
||
| CDS CCA 90 bp | CTGCTCTCCCGGTCCTGGGCACAGTTAGTGACCGTCTGGTGTGTCTaGCCATCATACAGTCCACTCTGCCGGCGTGCCTGCTCACTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: LLSRSWAQLVTVWCV*PSYSPLCRRACSLR Trigger: TCGGAGTGAGCAGGCACGCCGGCAGAGTGGACTGTATGATGGCCAGACACACCAGACGGTCACTAACTGTGCCCAGGACCGGGAGAGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113564.9 |
||
| CDS-3UTR CAA 90 bp | CACCCGTGCCGTACACAGGCAGAGGGACTGGCGGAGCCACAGGAACATGCTGTGGAGGTCATGAACTCGTaGAAGCGGTGGGAGAGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: HPCRTQAEGLAEPQEHAVEVMNS*KRWERG Trigger: ACCCCTCTCCCACCGCTTCAACGAGTTCATGACCTC...CACAGCATGTTCCTGTGGCTCCGCCAGTCCCTCTGCCTGTGTACGGCACGGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113559.10 ENSMUST00000113560.8 |
||
| CDS-3UTR CAA 90 bp | AGGGCAGTGTGCCGGGCTTGGCCTTACGGGGAGGAGGCGGGGCCAAGAAAGCCTTGCTCAGGTGGGAAGTaGCTGAAGTCTTCTGGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RAVCRAWPYGEEAGPRKPCSGGK*LKSSGV Trigger: CACACCAGAAGACTTCAGCAACTTCCCACCTGAGCA...AGGCTTTCTTGGCCCCGCCTCCTCCCCGTAAGGCCAAGCCCGGCACACTGCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS CCA 90 bp | GCCATCATACAGTCCACTCTGCCGGCGTGCCTGCTCACTCCGAGCTaGGAGTCTGCCTTCTACCTCAGCCAGCCAGGCCTCAAACTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: AIIQSTLPACLLTPS*ESAFYLSQPGLKLL Trigger: CAGAAGTTTGAGGCCTGGCTGGCTGAGGTAGAAGGCAGACTCCCAGCTCGGAGTGAGCAGGCACGCCGGCAGAGTGGACTGTATGATGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENSMUST00000073879.12 ENSMUST00000075326.11 ENSMUST00000100207.9 ENSMUST00000100208.9 ENSMUST00000113555.8 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 ENSMUST00000128431.3 ENSMUST00000128500.8 |
||
| CDS-3UTR CAA 90 bp | GCGGTCCACAGAGGGGGCGGAAAGGAGAGGGTCCGTGAGTACGCGACAGGACAGGAGCTGGAAAGGCTGTaGTCTGACACTGTGCGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: AVHRGGGKERVREYATGQELERL*SDTVRF Trigger: GAAACGCACAGTGTCAGACAACAGCCTTTCCAGCTC...CTGTCCTGTCGCGTACTCACGGACCCTCTCCTTTCCGCCCCCTCTGTGGACCGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113552.9 |
||
| CDS-3UTR CAA 90 bp | CCCGTGCCGTACACAGGCAGAGGGACTGGCGGAGCCACAGGAACATGCTGTGAAATGAATGGCCAGAGCTaGCCTCTGGACTTGCCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PVPYTGRGTGGATGTCCEMNGQS*PLDLPP Trigger: TGGCGGCAAGTCCAGAGGCAAGCTCTGGCCATTCAT...TTCACAGCATGTTCCTGTGGCTCCGCCAGTCCCTCTGCCTGTGTACGGCACGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CAA 90 bp | CAAAGGCACAGTGTGAGATGTGCAAGGAGTGGCCAGGCGATGAGCAGGTGGACTTCCGGGGCCAGGACCTaGTGCTCGCTCTCCTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: QRHSVRCARSGQAMSRWTSGART*CSLSWL Trigger: AAGCCAGGAGAGCGAGCACAAGGTCCTGGCCCCGGA...AGTCCACCTGCTCATCGCCTGGCCACTCCTTGCACATCTCACACTGTGCCTTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CAA 90 bp | AGGGAAGGCCTGAGGCAGCAGCCTCTGGACATGAAGGACACATCTGACGATGAGGGAGACTGGGGGCCGTaGGGAACAGCAGAGGGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: REGLRQQPLDMKDTSDDEGDWGP*GTAEGE Trigger: CTCACCCTCTGCTGTTCCCAACGGCCCCCAGTCTCC...CTCATCGTCAGATGTGTCCTTCATGTCCAGAGGCTGCTGCCTCAGGCCTTCCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113559.10 ENSMUST00000113560.8 |
||
| CDS-3UTR CAA 90 bp | GCCTCCCTGTGTGTTGTTTGGGCTGGGGCCCTGGATAAGCATGCTCAGCCTAGAGGTTCCTTTGGCTGCTaGGGAGACTGGGGGCCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: ASLCVVWAGALDKHAQPRGSFGC*GDWGPL Trigger: CAACGGCCCCCAGTCTCCCAAGCAGCCAAAGGAACC...TCTAGGCTGAGCATGCTTATCCAGGGCCCCAGCCCAAACAACACACAGGGAGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113559.10 ENSMUST00000113560.8 |
||
| CDS-3UTR CAA 90 bp | AGGGCAGTGTGCCGGGCTTGGCCTTACGGGGAGGAGGCGGGGCCAAGAAAGCCTCAAACCTCCTCTTACTaGACTCCAGTTGCTTCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: RAVCRAWPYGEEAGPRKPQTSSY*TPVASN Trigger: GTTGGAAGCAACTGGAGTCAAGTAAGAGGAGGTTTG...AGGCTTTCTTGGCCCCGCCTCCTCCCCGTAAGGCCAAGCCCGGCACACTGCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CAA 90 bp | ATGACAGCTGGGTGCTCAGTCCACCTGATGCACAACTGGCCCTCCTTGTCAGAATCCGGGGCCAGGACCTaGTGCTCGCTCTCCTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: MTAGCSVHLMHNWPSLSESGART*CSLSWL Trigger: AAGCCAGGAGAGCGAGCACAAGGTCCTGGCCCCGGA...TTCTGACAAGGAGGGCCAGTTGTGCATCAGGTGGACTGAGCACCCAGCTGTCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CAA 90 bp | GGGGAGGAGGCGGGGCCAAGAAAGCCTGAAGCTAATCCTTGCTTGCTCTTGAAATCCGGGGCCAGGACCTaGTGCTCGCTCTCCTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: GEEAGPRKPEANPCLLLKSGART*CSLSWL Trigger: AAGCCAGGAGAGCGAGCACAAGGTCCTGGCCCCGGA...TTTCAAGAGCAAGCAAGGATTAGCTTCAGGCTTTCTTGGCCCCGCCTCCTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS GCA 90 bp | GTCCAGGCACTTCCCGATGATGGGTATCACCTGCCGGTCCACCTCTaGGTACGTCTTCATGGACTCCCCAATACGCACAATCCGCCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: VQALPDDGYHLPVHL*VRLHGLPNTHNPPL Trigger: GAGAGGCGGATTGTGCGTATTGGGGAGTCCATGAAGACGTACGCAGAGGTGGACCGGCAGGTGATACCCATCATCGGGAAGTGCCTGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000073879.12 ENSMUST00000075326.11 ENSMUST00000100207.9 ENSMUST00000100208.9 ENSMUST00000113552.9 ENSMUST00000113555.8 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS GCA 90 bp | GCCTTCACTATCCCGTCCAGGCACTTCCCGATGATGGGTATCACCTaGCGGTCCACCTCTGCGTACGTCTTCATGGACTCCCCAATACGC | + |
|
Preference number: 5 (lower is better) Translates to: AFTIPSRHFPMMGIT*RSTSAYVFMDSPIR Trigger: GCGTATTGGGGAGTCCATGAAGACGTACGCAGAGGTGGACCGGCAGGTGATACCCATCATCGGGAAGTGCCTGGACGGGATAGTGAAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000073879.12 ENSMUST00000075326.11 ENSMUST00000100207.9 ENSMUST00000100208.9 ENSMUST00000113552.9 ENSMUST00000113555.8 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS CCA 90 bp | CTTGTGCTCGCTCTCCTGGCTTTGCTCCTCTGTGTAACTACCATCTaGGCTGCTCTCCCGGTCCTGGGCACAGTTAGTGACCGTCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LVLALLALLLCVTTI*AALPVLGTVSDRLV Trigger: CACCAGACGGTCACTAACTGTGCCCAGGACCGGGAGAGCAGCCCAGATGGTAGTTACACAGAGGAGCAAAGCCAGGAGAGCGAGCACAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113564.9 |
||
| CDS-3UTR CAA 90 bp | ACCTTGTCAGCTGCTCCCCCACCTTGGTACCCTCCCCTCTGCTCTGAGGTGGTACTCGCTCTCCTGGCTTaGCTCCTCTGTGTAACTACC | + |
|
Preference number: 5 (lower is better) Translates to: TLSAAPPPWYPPLCSEVVLALLA*LLCVTT Trigger: GGTAGTTACACAGAGGAGCAAAGCCAGGAGAGCGAG...TACCACCTCAGAGCAGAGGGGAGGGTACCAAGGTGGGGGAGCAGCTGACAAGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CAA 90 bp | AAAGGTGCGAAGGACCACCTCGGTACTCCCCCAAGCTCCACCACTCTAGGAGGGGGTGTGACACCCAGCTaGAGAGAAAGCCCACGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: KGAKDHLGTPPSSTTLGGGVTPS*RESPRF Trigger: AAAGCGTGGGCTTTCTCTCAAGCTGGGTGTCACACC...CCCTCCTAGAGTGGTGGAGCTTGGGGGAGTACCGAGGTGGTCCTTCGCACCTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000113560.8 |
||
| CDS CCA 90 bp | CTTGTGCTCGCTCTCCTGGCTTTGCTCCTCTGTGTAACTACCATCTaGGCTCTCCCGGTCCTGGGCACAGTTAGTGACCGTCTGGTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: LVLALLALLLCVTTI*ALPVLGTVSDRLVC Trigger: ACACACCAGACGGTCACTAACTGTGCCCAGGACCGGGAGAGCCCAGATGGTAGTTACACAGAGGAGCAAAGCCAGGAGAGCGAGCACAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000073879.12 ENSMUST00000075326.11 ENSMUST00000100207.9 ENSMUST00000100208.9 ENSMUST00000113555.8 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000128431.3 ENSMUST00000128500.8 |
||
| CDS-3UTR CAA 90 bp | TGCGAAGGACCACCTCGGTACTCCCCCAAGCTCCACCACTCTAGGAGGGCAACAGAGCTGGAAAGGCTGTaGTCTGACACTGTGCGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: CEGPPRYSPKLHHSRRATELERL*SDTVRF Trigger: GAAACGCACAGTGTCAGACAACAGCCTTTCCAGCTC...TGTTGCCCTCCTAGAGTGGTGGAGCTTGGGGGAGTACCGAGGTGGTCCTTCGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CAA 90 bp | CAGTTCCCCGAGTGTCTGAGTCGCTTGCTCTCTGCTGACCTCTTGAAGGCCTGTATGAATGGCCAGAGCTaGCCTCTGGACTTGCCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: QFPECLSRLLSADLLKACMNGQS*PLDLPP Trigger: TGGCGGCAAGTCCAGAGGCAAGCTCTGGCCATTCAT...ACAGGCCTTCAAGAGGTCAGCAGAGAGCAAGCGACTCAGACACTCGGGGAACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| CDS-3UTR CAA 90 bp | TGCCCCCAGTTCCCCGAGTGTCTGAGTCGCTTGCTCTCTGCTGACCTCTTGAAGCTCGCTCTCCTGGCTTaGCTCCTCTGTGTAACTACC | + |
|
Preference number: 5 (lower is better) Translates to: CPQFPECLSRLLSADLLKLALLA*LLCVTT Trigger: GGTAGTTACACAGAGGAGCAAAGCCAGGAGAGCGAG...CTTCAAGAGGTCAGCAGAGAGCAAGCGACTCAGACACTCGGGGAACTGGGGGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073879.12 ENSMUST00000128500.8 |
||
| CDS-3UTR CAA 90 bp | CTGGATAAGCATGCTCAGCCTAGAGGGAGGGGCCATTGCAGCTTCACGTCCTGCCTCGCTCTCCTGGCTTaGCTCCTCTGTGTAACTACC | + |
|
Preference number: 5 (lower is better) Translates to: LDKHAQPRGRGHCSFTSCLALLA*LLCVTT Trigger: GGTAGTTACACAGAGGAGCAAAGCCAGGAGAGCGAG...GCAGGACGTGAAGCTGCAATGGCCCCTCCCTCTAGGCTGAGCATGCTTATCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 |
||
| CDS-3UTR CAA 90 bp | AGATGTAAGCTAGCCGGTGGCAGTTCTGTACACAGCCAAGTTGGACAAGCGAACTCCGGGGCCAGGACCTaGTGCTCGCTCTCCTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: RCKLAGGSSVHSQVGQANSGART*CSLSWL Trigger: AAGCCAGGAGAGCGAGCACAAGGTCCTGGCCCCGGA...GTTCGCTTGTCCAACTTGGCTGTGTACAGAACTGCCACCGGCTAGCTTACATCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073879.12 ENSMUST00000128500.8 |
||
| CDS GCA 90 bp | TCCGCCTTGGTCACGTTGATGTCAGCGTCCATTTTCTCGAAGTACTaGTGTGCCCGGTCGGCTTCCTTACAGTCCCGCTCAAACCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SALVTLMSASIFSKY*CARSASLQSRSNLL Trigger: GAGGAGGTTTGAGCGGGACTGTAAGGAAGCCGACCGGGCACAGCAGTACTTCGAGAAAATGGACGCTGACATCAACGTGACCAAGGCGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENSMUST00000073879.12 ENSMUST00000075326.11 ENSMUST00000100207.9 ENSMUST00000100208.9 ENSMUST00000113552.9 ENSMUST00000113555.8 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 ENSMUST00000128500.8 ENSMUST00000149196.2 |
||
| CDS GCA 90 bp | CGTAGGAAGTGGGGACGTAACCCTCCTCGTCTTCATTTCTGCGGATaGGAGTCCACCCATCGCCTTTGTCCTCTTCAATCACGCTCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: RRKWGRNPPRLHFCG*ESTHRLCPLQSRSA Trigger: CGCTGAGCGTGATTGAAGAGGACAAAGGCGATGGGTGGACTCGCATCCGCAGAAATGAAGACGAGGAGGGTTACGTCCCCACTTCCTACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000073879.12 ENSMUST00000075326.11 ENSMUST00000100207.9 ENSMUST00000100208.9 ENSMUST00000113555.8 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 ENSMUST00000128500.8 |
||
| CDS-3UTR CAA 90 bp | TGCGAAGGACCACCTCGGTACTCCCCCAAGCTCCACCACTCTAGGAGGGCAACATTGCAAGCCGTGTACTaGTACTCCTCCTCTTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: CEGPPRYSPKLHHSRRATLQAVY*YSSSSF Trigger: GAAGGAAGAGGAGGAGTACAAGTACACGGCTTGCAA...TGTTGCCCTCCTAGAGTGGTGGAGCTTGGGGGAGTACCGAGGTGGTCCTTCGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CAA 90 bp | GTCAGCACTTCCACAAACCGTGGACAAAGCACAGGCCCAACCCTGAGGACCTGCTCCGCCTTGGTCACGTaGATGTCAGCGTCCATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VSTSTNRGQSTGPTLRTCSALVT*MSASIF Trigger: GAAAATGGACGCTGACATCAACGTGACCAAGGCGGA...GCAGGTCCTCAGGGTTGGGCCTGTGCTTTGTCCACGGTTTGTGGAAGTGCTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CAA 90 bp | CAAAGGCACAGTGTGAGATGTGCAAGGAGTGGCCAGGCGATGAGCAGGTGGACTGCTGTCCTCTGCCATTaGCTGGCGTATCTGAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: QRHSVRCARSGQAMSRWTAVLCH*LAYLSL Trigger: CAAGCTCAGATACGCCAGCAAATGGCAGAGGACAGC...AGTCCACCTGCTCATCGCCTGGCCACTCCTTGCACATCTCACACTGTGCCTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CAA 90 bp | CTGGATAAGCATGCTCAGCCTAGAGGGAGGGGCCATTGCAGCTTCACGTCCTGCGAGCTGGAAAGGCTGTaGTCTGACACTGTGCGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LDKHAQPRGRGHCSFTSCELERL*SDTVRF Trigger: GAAACGCACAGTGTCAGACAACAGCCTTTCCAGCTC...GCAGGACGTGAAGCTGCAATGGCCCCTCCCTCTAGGCTGAGCATGCTTATCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 |
||
| CDS-3UTR CAA 90 bp | CCAGAGCCAGTACAGTTCCACAGGATGTCCACGGCAGACCGACTTTCTCAGAGAATGAATGGCCAGAGCTaGCCTCTGGACTTGCCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PEPVQFHRMSTADRLSQRMNGQS*PLDLPP Trigger: TGGCGGCAAGTCCAGAGGCAAGCTCTGGCCATTCAT...TCTCTGAGAAAGTCGGTCTGCCGTGGACATCCTGTGGAACTGTACTGGCTCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CAA 90 bp | CAAAGGCACAGTGTGAGATGTGCAAGGAGTGGCCAGGCGATGAGCAGGTGGACTCTCGCTCTCCTGGCTTaGCTCCTCTGTGTAACTACC | + |
|
Preference number: 5 (lower is better) Translates to: QRHSVRCARSGQAMSRWTLALLA*LLCVTT Trigger: GGTAGTTACACAGAGGAGCAAAGCCAGGAGAGCGAG...AGTCCACCTGCTCATCGCCTGGCCACTCCTTGCACATCTCACACTGTGCCTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CAA 90 bp | CCCGAGTGTCTGAGTCGCTTGCTCTCTGCTGACCTCTTGAAGGCCTGTAACAGCCTCGCTCTCCTGGCTTaGCTCCTCTGTGTAACTACC | + |
|
Preference number: 5 (lower is better) Translates to: PECLSRLLSADLLKACNSLALLA*LLCVTT Trigger: GGTAGTTACACAGAGGAGCAAAGCCAGGAGAGCGAG...GCTGTTACAGGCCTTCAAGAGGTCAGCAGAGAGCAAGCGACTCAGACACTCGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073879.12 ENSMUST00000128500.8 |
||
| CDS-3UTR CAA 90 bp | TACCCTCCCCTCTGCTCTGAGGTGGTACCTCACAAAATGTCTGTAATACTGGCCGGTTCCTTTGGCTGCTaGGGAGACTGGGGGCCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: YPPLCSEVVPHKMSVILAGSFGC*GDWGPL Trigger: CAACGGCCCCCAGTCTCCCAAGCAGCCAAAGGAACC...GGCCAGTATTACAGACATTTTGTGAGGTACCACCTCAGAGCAGAGGGGAGGGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000113559.10 ENSMUST00000113560.8 |
||
| CDS GCA 90 bp | CTTCGACGTAGGAAGTGGGGACGTAACCCTCCTCGTCTTCATTTCTaGGGATGCGAGTCCACCCATCGCCTTTGTCCTCTTCAATCACGC | + |
|
Preference number: 5 (lower is better) Translates to: LRRRKWGRNPPRLHF*GCESTHRLCPLQSR Trigger: GCGTGATTGAAGAGGACAAAGGCGATGGGTGGACTCGCATCCGCAGAAATGAAGACGAGGAGGGTTACGTCCCCACTTCCTACGTCGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000073879.12 ENSMUST00000075326.11 ENSMUST00000100207.9 ENSMUST00000100208.9 ENSMUST00000113555.8 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 ENSMUST00000128500.8 |
||
| CDS-3UTR CAA 90 bp | GCCTCCCTGTGTGTTGTTTGGGCTGGGGCCCTGGATAAGCATGCTCAGCCTAGATTGCAAGCCGTGTACTaGTACTCCTCCTCTTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ASLCVVWAGALDKHAQPRLQAVY*YSSSSF Trigger: GAAGGAAGAGGAGGAGTACAAGTACACGGCTTGCAA...TCTAGGCTGAGCATGCTTATCCAGGGCCCCAGCCCAAACAACACACAGGGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073879.12 ENSMUST00000113560.8 ENSMUST00000113562.9 |
||
| CDS-3UTR CAA 90 bp | ACCTTGTCAGCTGCTCCCCCACCTTGGTACCCTCCCCTCTGCTCTGAGGTGGTACAAACCTCCTCTTACTaGACTCCAGTTGCTTCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: TLSAAPPPWYPPLCSEVVQTSSY*TPVASN Trigger: GTTGGAAGCAACTGGAGTCAAGTAAGAGGAGGTTTG...TACCACCTCAGAGCAGAGGGGAGGGTACCAAGGTGGGGGAGCAGCTGACAAGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CAA 90 bp | TGCGAAGGACCACCTCGGTACTCCCCCAAGCTCCACCACTCTAGGAGGGCAACACAAACCTCCTCTTACTaGACTCCAGTTGCTTCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: CEGPPRYSPKLHHSRRATQTSSY*TPVASN Trigger: GTTGGAAGCAACTGGAGTCAAGTAAGAGGAGGTTTG...TGTTGCCCTCCTAGAGTGGTGGAGCTTGGGGGAGTACCGAGGTGGTCCTTCGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CAA 90 bp | GAGTGTCTGAGTCGCTTGCTCTCTGCTGACCTCTTGAAGGCCTGTAACAGCCACGCTGTCCTCTGCCATTaGCTGGCGTATCTGAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: ECLSRLLSADLLKACNSHAVLCH*LAYLSL Trigger: CAAGCTCAGATACGCCAGCAAATGGCAGAGGACAGC...GTGGCTGTTACAGGCCTTCAAGAGGTCAGCAGAGAGCAAGCGACTCAGACACTC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| CDS-3UTR CAA 90 bp | CCGGTCCTGGGACAACGCATCTGCAATAAGACAGAGGCCATGGCAAAGACTCCAGCTGTCCTCTGCCATTaGCTGGCGTATCTGAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PVLGQRICNKTEAMAKTPAVLCH*LAYLSL Trigger: CAAGCTCAGATACGCCAGCAAATGGCAGAGGACAGC...TGGAGTCTTTGCCATGGCCTCTGTCTTATTGCAGATGCGTTGTCCCAGGACCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113552.9 |
||
| CDS-3UTR CAA 90 bp | AGTCGCTTGCTCTCTGCTGACCTCTTGAAGGCCTGTAACAGCCACAGTGGTGGGGAGCTGGAAAGGCTGTaGTCTGACACTGTGCGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SRLLSADLLKACNSHSGGELERL*SDTVRF Trigger: GAAACGCACAGTGTCAGACAACAGCCTTTCCAGCTC...CCCACCACTGTGGCTGTTACAGGCCTTCAAGAGGTCAGCAGAGAGCAAGCGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| CDS-3UTR CAA 90 bp | AGGGAAGGCCTGAGGCAGCAGCCTCTGGACATGAAGGACACATCTGACGATGAGGAGCTGGAAAGGCTGTaGTCTGACACTGTGCGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: REGLRQQPLDMKDTSDDEELERL*SDTVRF Trigger: GAAACGCACAGTGTCAGACAACAGCCTTTCCAGCTC...CTCATCGTCAGATGTGTCCTTCATGTCCAGAGGCTGCTGCCTCAGGCCTTCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CAA 90 bp | CAAAGGCACAGTGTGAGATGTGCAAGGAGTGGCCAGGCGATGAGCAGGTGGACTGAGCTGGAAAGGCTGTaGTCTGACACTGTGCGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: QRHSVRCARSGQAMSRWTELERL*SDTVRF Trigger: GAAACGCACAGTGTCAGACAACAGCCTTTCCAGCTC...AGTCCACCTGCTCATCGCCTGGCCACTCCTTGCACATCTCACACTGTGCCTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CAA 90 bp | CAGTTCCCCGAGTGTCTGAGTCGCTTGCTCTCTGCTGACCTCTTGAAGGCCTGTTCAGGCTTGCCTTCTTaGGAGCTGGAAAGGCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: QFPECLSRLLSADLLKACSGLPS*ELERLL Trigger: CAACAGCCTTTCCAGCTCCAAAGAAGGCAAGCCTGA...ACAGGCCTTCAAGAGGTCAGCAGAGAGCAAGCGACTCAGACACTCGGGGAACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073879.12 |
||
| CDS-3UTR CAA 90 bp | AGGGAAGGCCTGAGGCAGCAGCCTCTGGACATGAAGGACACATCTGACGATGAGTCAGGCTTGCCTTCTTaGGAGCTGGAAAGGCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: REGLRQQPLDMKDTSDDESGLPS*ELERLL Trigger: CAACAGCCTTTCCAGCTCCAAAGAAGGCAAGCCTGA...CTCATCGTCAGATGTGTCCTTCATGTCCAGAGGCTGCTGCCTCAGGCCTTCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CAA 90 bp | AGGTCAGTGATGTTAGTGTGGGTGACCCGGTCCTGGGACAACGCATCTGCAATAATGAATGGCCAGAGCTaGCCTCTGGACTTGCCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: RSVMLVWVTRSWDNASAIMNGQS*PLDLPP Trigger: TGGCGGCAAGTCCAGAGGCAAGCTCTGGCCATTCAT...TATTGCAGATGCGTTGTCCCAGGACCGGGTCACCCACACTAACATCACTGACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113552.9 |
||
| CDS-3UTR CAA 90 bp | CAGTTCCCCGAGTGTCTGAGTCGCTTGCTCTCTGCTGACCTCTTGAAGGCCTGTTGCTCAGGTGGGAAGTaGCTGAAGTCTTCTGGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: QFPECLSRLLSADLLKACCSGGK*LKSSGV Trigger: CACACCAGAAGACTTCAGCAACTTCCCACCTGAGCA...ACAGGCCTTCAAGAGGTCAGCAGAGAGCAAGCGACTCAGACACTCGGGGAACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073879.12 ENSMUST00000128500.8 |
||
| CDS TCA 90 bp | TCTGAGCTTGTTGTCGTGCCTTTTCCACATCCGCCTTGGTCACGTTaGTGTCAGCGTCCATTTTCTCGAAGTACTGCTGTGCCCGGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: SELVVVPFPHPPWSR*CQRPFSRSTAVPGR Trigger: CCGACCGGGCACAGCAGTACTTCGAGAAAATGGACGCTGACATCAACGTGACCAAGGCGGATGTGGAAAAGGCACGACAACAAGCTCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 11 transcripts: ENSMUST00000073879.12 ENSMUST00000075326.11 ENSMUST00000100207.9 ENSMUST00000100208.9 ENSMUST00000113552.9 ENSMUST00000113555.8 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 ENSMUST00000149196.2 |
||
| CDS CCA 90 bp | AAGTCTTCTGGTGTGACACCCCCACGCTTTAGGCTCCGGAAGCAGTaGATTTTGGGTTTGGAGGTCATGAACTCGTTGAAGCGGTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: KSSGVTPPRFRLRKQ*ILGLEVMNSLKRWE Trigger: CTCCCACCGCTTCAACGAGTTCATGACCTCCAAACCCAAAATCCACTGCTTCCGGAGCCTAAAGCGTGGGGGTGTCACACCAGAAGACTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000075326.11 ENSMUST00000100208.9 ENSMUST00000113559.10 |
||
| CDS CCA 90 bp | ACACCCAGCTTGAGAGAAAGCCCACGCTTTAGGCTCCGGAAGCAGTaGATTTTGGGTTTGGAGGTCATGAACTCGTTGAAGCGGTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: TPSLRESPRFRLRKQ*ILGLEVMNSLKRWE Trigger: CTCCCACCGCTTCAACGAGTTCATGACCTCCAAACCCAAAATCCACTGCTTCCGGAGCCTAAAGCGTGGGCTTTCTCTCAAGCTGGGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113555.8 ENSMUST00000113560.8 |
||
| CDS-3UTR CAA 90 bp | TGTGAGGTCAGTGATGTTAGTGTGGGTGACCCGGTCCTGGGACAACGCATCTGCTTGCAAGCCGTGTACTaGTACTCCTCCTCTTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: CEVSDVSVGDPVLGQRICLQAVY*YSSSSF Trigger: GAAGGAAGAGGAGGAGTACAAGTACACGGCTTGCAA...GCAGATGCGTTGTCCCAGGACCGGGTCACCCACACTAACATCACTGACCTCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113552.9 |
||
| CDS-3UTR CAA 90 bp | CTAGCCGGTGGCAGTTCTGTACACAGCCAAGTTGGACAAGCGAACCCAGGCACATTGCAAGCCGTGTACTaGTACTCCTCCTCTTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LAGGSSVHSQVGQANPGTLQAVY*YSSSSF Trigger: GAAGGAAGAGGAGGAGTACAAGTACACGGCTTGCAA...TGTGCCTGGGTTCGCTTGTCCAACTTGGCTGTGTACAGAACTGCCACCGGCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073879.12 ENSMUST00000128500.8 |
||
| CDS-3UTR CAA 90 bp | GTCAGGCTGGCAAGCTTGATTAGATGGGACTCGGTCCCCTTGCTCCCAGCAGTCCAAACCTCCTCTTACTaGACTCCAGTTGCTTCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: VRLASLIRWDSVPLLPAVQTSSY*TPVASN Trigger: GTTGGAAGCAACTGGAGTCAAGTAAGAGGAGGTTTG...GACTGCTGGGAGCAAGGGGACCGAGTCCCATCTAATCAAGCTTGCCAGCCTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113552.9 |
||
| CDS-3UTR CAA 90 bp | GGGGAGGAGGCGGGGCCAAGAAAGCCTGAAGCTAATCCTTGCTTGCTCTTGAAATCAGGCTTGCCTTCTTaGGAGCTGGAAAGGCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: GEEAGPRKPEANPCLLLKSGLPS*ELERLL Trigger: CAACAGCCTTTCCAGCTCCAAAGAAGGCAAGCCTGA...TTTCAAGAGCAAGCAAGGATTAGCTTCAGGCTTTCTTGGCCCCGCCTCCTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CAA 90 bp | CTGGATAAGCATGCTCAGCCTAGAGGGAGGGGCCATTGCAGCTTCACGTCCTGCCAGTGGATTTTGGGTTaGGAGGTCATGAACTCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LDKHAQPRGRGHCSFTSCQWILG*EVMNSL Trigger: CAACGAGTTCATGACCTCCAAACCCAAAATCCACTG...GCAGGACGTGAAGCTGCAATGGCCCCTCCCTCTAGGCTGAGCATGCTTATCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113559.10 ENSMUST00000113560.8 |
||
| CDS-3UTR CAA 90 bp | CAAAGGCACAGTGTGAGATGTGCAAGGAGTGGCCAGGCGATGAGCAGGTGGACTCGGAAGCAGTGGATTTaGGGTTTGGAGGTCATGAAC | + |
|
Preference number: 5 (lower is better) Translates to: QRHSVRCARSGQAMSRWTRKQWI*GLEVMN Trigger: GTTCATGACCTCCAAACCCAAAATCCACTGCTTCCG...AGTCCACCTGCTCATCGCCTGGCCACTCCTTGCACATCTCACACTGTGCCTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113559.10 ENSMUST00000113560.8 |
||
| CDS-3UTR CAA 90 bp | ATGACAGCTGGGTGCTCAGTCCACCTGATGCACAACTGGCCCTCCTTGTCAGAATGCTCAGGTGGGAAGTaGCTGAAGTCTTCTGGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: MTAGCSVHLMHNWPSLSECSGGK*LKSSGV Trigger: CACACCAGAAGACTTCAGCAACTTCCCACCTGAGCA...TTCTGACAAGGAGGGCCAGTTGTGCATCAGGTGGACTGAGCACCCAGCTGTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CAA 90 bp | GGGGCTTGTGGCCAAAGCCTTGAGTACTTCTGTACCAGGAAAGGAGAGAGTGGCTGCTCAGGTGGGAAGTaGCTGAAGTCTTCTGGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: GACGQSLEYFCTRKGESGCSGGK*LKSSGV Trigger: CACACCAGAAGACTTCAGCAACTTCCCACCTGAGCA...GCCACTCTCTCCTTTCCTGGTACAGAAGTACTCAAGGCTTTGGCCACAAGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CAA 90 bp | CAGTTGACAAAGGCACAGTGTGAGATGTGCAAGGAGTGGCCAGGCGATGAGCAGTGCTCAGGTGGGAAGTaGCTGAAGTCTTCTGGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: QLTKAQCEMCKEWPGDEQCSGGK*LKSSGV Trigger: CACACCAGAAGACTTCAGCAACTTCCCACCTGAGCA...CTGCTCATCGCCTGGCCACTCCTTGCACATCTCACACTGTGCCTTTGTCAACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS TCA 90 bp | TGCCCGGTCGGCTTCCTTACAGTCCCGCTCAAACCTCCTCTTACTTaGCTCCAGTTGCTTCCAACACGTTTCTATGTGCTGCTGAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: CPVGFLTVPLKPPLT*LQLLPTRFYVLLSL Trigger: AAGGCTCAGCAGCACATAGAAACGTGTTGGAAGCAACTGGAGTCAAGTAAGAGGAGGTTTGAGCGGGACTGTAAGGAAGCCGACCGGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000073879.12 ENSMUST00000075326.11 ENSMUST00000100207.9 ENSMUST00000100208.9 ENSMUST00000113552.9 ENSMUST00000113555.8 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 ENSMUST00000128500.8 ENSMUST00000149196.2 |
||
| CDS GCA 90 bp | CTTGGTCACGTTGATGTCAGCGTCCATTTTCTCGAAGTACTGCTGTaGCCGGTCGGCTTCCTTACAGTCCCGCTCAAACCTCCTCTTACT | + |
|
Preference number: 5 (lower is better) Translates to: LGHVDVSVHFLEVLL*PVGFLTVPLKPPLT Trigger: AGTAAGAGGAGGTTTGAGCGGGACTGTAAGGAAGCCGACCGGGCACAGCAGTACTTCGAGAAAATGGACGCTGACATCAACGTGACCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENSMUST00000073879.12 ENSMUST00000075326.11 ENSMUST00000100207.9 ENSMUST00000100208.9 ENSMUST00000113552.9 ENSMUST00000113555.8 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 ENSMUST00000128500.8 ENSMUST00000149196.2 |
||
| CDS-3UTR CAA 90 bp | CCAGAGCCAGTACAGTTCCACAGGATGTCCACGGCAGACCGACTTTCTCAGAGATTGCAAGCCGTGTACTaGTACTCCTCCTCTTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PEPVQFHRMSTADRLSQRLQAVY*YSSSSF Trigger: GAAGGAAGAGGAGGAGTACAAGTACACGGCTTGCAA...TCTCTGAGAAAGTCGGTCTGCCGTGGACATCCTGTGGAACTGTACTGGCTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CAA 90 bp | ATGACAGCTGGGTGCTCAGTCCACCTGATGCACAACTGGCCCTCCTTGTCAGAAAATCTGAGCTCAGGCTaGCCTTCTTTGGAGCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: MTAGCSVHLMHNWPSLSENLSSG*PSLELE Trigger: TTCCAGCTCCAAAGAAGGCAAGCCTGAGCTCAGATT...TTCTGACAAGGAGGGCCAGTTGTGCATCAGGTGGACTGAGCACCCAGCTGTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CAA 90 bp | CAGTTGACAAAGGCACAGTGTGAGATGTGCAAGGAGTGGCCAGGCGATGAGCAGAATCTGAGCTCAGGCTaGCCTTCTTTGGAGCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: QLTKAQCEMCKEWPGDEQNLSSG*PSLELE Trigger: TTCCAGCTCCAAAGAAGGCAAGCCTGAGCTCAGATT...CTGCTCATCGCCTGGCCACTCCTTGCACATCTCACACTGTGCCTTTGTCAACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CAA 90 bp | TGGACATTCTACGTTCACTACAGATGCCACCAGAAGGCATTAATGGCCTCCCTGATGAATGGCCAGAGCTaGCCTCTGGACTTGCCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: WTFYVHYRCHQKALMASLMNGQS*PLDLPP Trigger: TGGCGGCAAGTCCAGAGGCAAGCTCTGGCCATTCAT...CAGGGAGGCCATTAATGCCTTCTGGTGGCATCTGTAGTGAACGTAGAATGTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 |
||
| CDS-3UTR CAA 90 bp | CTACAAGAGGCACAAGGTCTTTGGTGGGAACAGAGGAGAGTCCTCAAATGCTACGAGGTCATGAACTCGTaGAAGCGGTGGGAGAGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LQEAQGLWWEQRRVLKCYEVMNS*KRWERG Trigger: ACCCCTCTCCCACCGCTTCAACGAGTTCATGACCTC...GTAGCATTTGAGGACTCTCCTCTGTTCCCACCAAAGACCTTGTGCCTCTTGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113559.10 ENSMUST00000113560.8 |
||
| CDS-3UTR CAA 90 bp | CCAGAGCCAGTACAGTTCCACAGGATGTCCACGGCAGACCGACTTTCTCAGAGACGGAAGCAGTGGATTTaGGGTTTGGAGGTCATGAAC | + |
|
Preference number: 5 (lower is better) Translates to: PEPVQFHRMSTADRLSQRRKQWI*GLEVMN Trigger: GTTCATGACCTCCAAACCCAAAATCCACTGCTTCCG...TCTCTGAGAAAGTCGGTCTGCCGTGGACATCCTGTGGAACTGTACTGGCTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113559.10 ENSMUST00000113560.8 |
||
| CDS-3UTR CAA 90 bp | GCCTCCCTGTGTGTTGTTTGGGCTGGGGCCCTGGATAAGCATGCTCAGCCTAGAACACCCTTGTTTTTCTaGATGAATGGCCAGAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: ASLCVVWAGALDKHAQPRTPLFF*MNGQSL Trigger: CAAGCTCTGGCCATTCATCAAGAAAAACAAGGGTGT...TCTAGGCTGAGCATGCTTATCCAGGGCCCCAGCCCAAACAACACACAGGGAGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073879.12 ENSMUST00000113562.9 |
||
| CDS-3UTR CAA 90 bp | GTCAGCACTTCCACAAACCGTGGACAAAGCACAGGCCCAACCCTGAGGACCTGCATCTCCGTCCTCTCCTaGACAAACTTGATGTATTTC | + |
|
Preference number: 5 (lower is better) Translates to: VSTSTNRGQSTGPTLRTCISVLS*TNLMYF Trigger: GAAATACATCAAGTTTGTCAAGGAGAGGACGGAGAT...GCAGGTCCTCAGGGTTGGGCCTGTGCTTTGTCCACGGTTTGTGGAAGTGCTGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CAA 90 bp | TTGCTCTCTGCTGACCTCTTGAAGGCCTGTAACAGCCACAGTGGTGGGGAGAGACAAACCTCCTCTTACTaGACTCCAGTTGCTTCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: LLSADLLKACNSHSGGERQTSSY*TPVASN Trigger: GTTGGAAGCAACTGGAGTCAAGTAAGAGGAGGTTTG...TCTCTCCCCACCACTGTGGCTGTTACAGGCCTTCAAGAGGTCAGCAGAGAGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073879.12 ENSMUST00000128500.8 |
||
| CDS-3UTR CAA 90 bp | TCACAGGGGCTTGTGGCCAAAGCCTTGAGTACTTCTGTACCAGGAAAGGAGAGATCCGCCTTGGTCACGTaGATGTCAGCGTCCATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SQGLVAKALSTSVPGKERSALVT*MSASIF Trigger: GAAAATGGACGCTGACATCAACGTGACCAAGGCGGA...TCTCTCCTTTCCTGGTACAGAAGTACTCAAGGCTTTGGCCACAAGCCCCTGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CAA 90 bp | GCACAACTGGCCCTCCTTGTCAGAATTTTGTTAGTCACCAGGAAACCAGGGGTGTCCGCCTTGGTCACGTaGATGTCAGCGTCCATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: AQLALLVRILLVTRKPGVSALVT*MSASIF Trigger: GAAAATGGACGCTGACATCAACGTGACCAAGGCGGA...CACCCCTGGTTTCCTGGTGACTAACAAAATTCTGACAAGGAGGGCCAGTTGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CAA 90 bp | GTCAGGCTGGCAAGCTTGATTAGATGGGACTCGGTCCCCTTGCTCCCAGCAGTCCAAATGGCCAGTACCTaGTTTTTCTTGATGAATGGC | + |
|
Preference number: 5 (lower is better) Translates to: VRLASLIRWDSVPLLPAVQMAST*FFLMNG Trigger: GCCATTCATCAAGAAAAACAAGGTACTGGCCATTTG...GACTGCTGGGAGCAAGGGGACCGAGTCCCATCTAATCAAGCTTGCCAGCCTGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113552.9 |
||
| CDS-3UTR CAA 90 bp | GGGGAGGAGGCGGGGCCAAGAAAGCCTGAAGCTAATCCTTGCTTGCTCTTGAAAGGAGGCTTGTTTTTCTaGATGAATGGCCAGAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GEEAGPRKPEANPCLLLKGGLFF*MNGQSL Trigger: CAAGCTCTGGCCATTCATCAAGAAAAACAAGCCTCC...TTTCAAGAGCAAGCAAGGATTAGCTTCAGGCTTTCTTGGCCCCGCCTCCTCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113559.10 |
||
| CDS GCA 90 bp | CGGAAATGGTGCCTTCGTTCTGACCTTCAAATGTGTAGAGGGCCTTaGAGGTCCCTATGGCTGGAAGCGGCTCCTCATCATCAAATTCAT | + |
|
Preference number: 5 (lower is better) Translates to: RKWCLRSDLQMCRGP*RSLWLEAAPHHQIH Trigger: ATGAATTTGATGATGAGGAGCCGCTTCCAGCCATAGGGACCTGCAAGGCCCTCTACACATTTGAAGGTCAGAACGAAGGCACCATTTCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENSMUST00000073879.12 ENSMUST00000075326.11 ENSMUST00000100207.9 ENSMUST00000100208.9 ENSMUST00000113555.8 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 ENSMUST00000128431.3 ENSMUST00000128500.8 |
||
| CDS-3UTR CAA 90 bp | TGTGAGGTCAGTGATGTTAGTGTGGGTGACCCGGTCCTGGGACAACGCATCTGCATCTCCGTCCTCTCCTaGACAAACTTGATGTATTTC | + |
|
Preference number: 5 (lower is better) Translates to: CEVSDVSVGDPVLGQRICISVLS*TNLMYF Trigger: GAAATACATCAAGTTTGTCAAGGAGAGGACGGAGAT...GCAGATGCGTTGTCCCAGGACCGGGTCACCCACACTAACATCACTGACCTCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113552.9 |
||
| CDS-3UTR CAA 90 bp | AGATGTAAGCTAGCCGGTGGCAGTTCTGTACACAGCCAAGTTGGACAAGCGAACTTGCAAGCCGTGTACTaGTACTCCTCCTCTTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RCKLAGGSSVHSQVGQANLQAVY*YSSSSF Trigger: GAAGGAAGAGGAGGAGTACAAGTACACGGCTTGCAA...GTTCGCTTGTCCAACTTGGCTGTGTACAGAACTGCCACCGGCTAGCTTACATCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073879.12 ENSMUST00000128500.8 |
||
| CDS-3UTR CAA 90 bp | TGGACATTCTACGTTCACTACAGATGCCACCAGAAGGCATTAATGGCCTCCCTGTCAGGCTTGCCTTCTTaGGAGCTGGAAAGGCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: WTFYVHYRCHQKALMASLSGLPS*ELERLL Trigger: CAACAGCCTTTCCAGCTCCAAAGAAGGCAAGCCTGA...CAGGGAGGCCATTAATGCCTTCTGGTGGCATCTGTAGTGAACGTAGAATGTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 |
||
| CDS-3UTR CAA 90 bp | GCACAACTGGCCCTCCTTGTCAGAATTTTGTTAGTCACCAGGAAACCAGGGGTGAATCTGAGCTCAGGCTaGCCTTCTTTGGAGCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: AQLALLVRILLVTRKPGVNLSSG*PSLELE Trigger: TTCCAGCTCCAAAGAAGGCAAGCCTGAGCTCAGATT...CACCCCTGGTTTCCTGGTGACTAACAAAATTCTGACAAGGAGGGCCAGTTGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CAA 90 bp | GGGGAGGAGGCGGGGCCAAGAAAGCCTGAAGCTAATCCTTGCTTGCTCTTGAAAACACCCTTGTTTTTCTaGATGAATGGCCAGAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GEEAGPRKPEANPCLLLKTPLFF*MNGQSL Trigger: CAAGCTCTGGCCATTCATCAAGAAAAACAAGGGTGT...TTTCAAGAGCAAGCAAGGATTAGCTTCAGGCTTTCTTGGCCCCGCCTCCTCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000073879.12 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| CDS-3UTR CAA 90 bp | CAGTTGACAAAGGCACAGTGTGAGATGTGCAAGGAGTGGCCAGGCGATGAGCAGACACCCTTGTTTTTCTaGATGAATGGCCAGAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: QLTKAQCEMCKEWPGDEQTPLFF*MNGQSL Trigger: CAAGCTCTGGCCATTCATCAAGAAAAACAAGGGTGT...CTGCTCATCGCCTGGCCACTCCTTGCACATCTCACACTGTGCCTTTGTCAACTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000073879.12 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| CDS GCA 90 bp | GCCCGGCGTAGTCATTCATCTCATTCAGGGTGGAAAGAAAGGCTTTaGAAGCCGTGTACTTGTACTCCTCCTCTTCCTTCGAGTTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: ARRSHSSHSGWKERL*KPCTCTPPLPSSSS Trigger: AGAAGAACTCGAAGGAAGAGGAGGAGTACAAGTACACGGCTTGCAAAGCCTTTCTTTCCACCCTGAATGAGATGAATGACTACGCCGGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000073879.12 ENSMUST00000075326.11 ENSMUST00000100207.9 ENSMUST00000100208.9 ENSMUST00000113552.9 ENSMUST00000113555.8 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 ENSMUST00000128500.8 ENSMUST00000136181.8 ENSMUST00000149196.2 |
||
| CDS CCA 90 bp | AGGAACCTTTGGCGTTTTTGTCTAAATAGACTTCGACGTAGGAAGTaGGGACGTAACCCTCCTCGTCTTCATTTCTGCGGATGCGAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RNLWRFCLNRLRRRK*GRNPPRLHFCGCES Trigger: GGACTCGCATCCGCAGAAATGAAGACGAGGAGGGTTACGTCCCCACTTCCTACGTCGAAGTCTATTTAGACAAAAACGCCAAAGGTTCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| CDS-3UTR CAA 90 bp | TTGCTCTCTGCTGACCTCTTGAAGGCCTGTAACAGCCACAGTGGTGGGGAGAGAATCTCCGTCCTCTCCTaGACAAACTTGATGTATTTC | + |
|
Preference number: 5 (lower is better) Translates to: LLSADLLKACNSHSGGERISVLS*TNLMYF Trigger: GAAATACATCAAGTTTGTCAAGGAGAGGACGGAGAT...TCTCTCCCCACCACTGTGGCTGTTACAGGCCTTCAAGAGGTCAGCAGAGAGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073879.12 ENSMUST00000128500.8 |
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| CDS-3UTR CAA 90 bp | GCACAACTGGCCCTCCTTGTCAGAATTTTGTTAGTCACCAGGAAACCAGGGGTGCAAACCTCCTCTTACTaGACTCCAGTTGCTTCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: AQLALLVRILLVTRKPGVQTSSY*TPVASN Trigger: GTTGGAAGCAACTGGAGTCAAGTAAGAGGAGGTTTG...CACCCCTGGTTTCCTGGTGACTAACAAAATTCTGACAAGGAGGGCCAGTTGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| CDS-3UTR CAA 90 bp | AAGGCCTGTAACAGCCACAGTGGTGGGGAGAGACAACTCCAATGCTTTTTGTTTTCCGCCTTGGTCACGTaGATGTCAGCGTCCATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: KACNSHSGGERQLQCFLFSALVT*MSASIF Trigger: GAAAATGGACGCTGACATCAACGTGACCAAGGCGGA...AAACAAAAAGCATTGGAGTTGTCTCTCCCCACCACTGTGGCTGTTACAGGCCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000073879.12 ENSMUST00000128500.8 |
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| CDS TCA 90 bp | CTCTTACTTGACTCCAGTTGCTTCCAACACGTTTCTATGTGCTGCTaGGCCTTCCGTCCATCATGGAAGTTCGATTTCCTCTCCTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LLLDSSCFQHVSMCC*AFRPSWKFDFLSCF Trigger: GAAGCAGGAGAGGAAATCGAACTTCCATGATGGACGGAAGGCTCAGCAGCACATAGAAACGTGTTGGAAGCAACTGGAGTCAAGTAAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000073879.12 ENSMUST00000075326.11 ENSMUST00000100207.9 ENSMUST00000100208.9 ENSMUST00000113552.9 ENSMUST00000113555.8 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 ENSMUST00000128500.8 ENSMUST00000149196.2 |
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| CDS-3UTR CAA 90 bp | TGGACATTCTACGTTCACTACAGATGCCACCAGAAGGCATTAATGGCCTCCCTGCAAACCTCCTCTTACTaGACTCCAGTTGCTTCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: WTFYVHYRCHQKALMASLQTSSY*TPVASN Trigger: GTTGGAAGCAACTGGAGTCAAGTAAGAGGAGGTTTG...CAGGGAGGCCATTAATGCCTTCTGGTGGCATCTGTAGTGAACGTAGAATGTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 |
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| CDS-3UTR CAA 90 bp | TCACAAAATGTCTGTAATACTGGCCCCAATGCATGGATGTCAGCACTTCCACAAGCTGTCCTCTGCCATTaGCTGGCGTATCTGAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SQNVCNTGPNAWMSALPQAVLCH*LAYLSL Trigger: CAAGCTCAGATACGCCAGCAAATGGCAGAGGACAGC...TTGTGGAAGTGCTGACATCCATGCATTGGGGCCAGTATTACAGACATTTTGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| CDS-3UTR CAA 90 bp | GCAGAAGATCATGACCCAAAGCTCATGCAGACAGTGACATGCAATCTAGGCTCTAATCTGAGCTCAGGCTaGCCTTCTTTGGAGCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: AEDHDPKLMQTVTCNLGSNLSSG*PSLELE Trigger: TTCCAGCTCCAAAGAAGGCAAGCCTGAGCTCAGATT...AGAGCCTAGATTGCATGTCACTGTCTGCATGAGCTTTGGGTCATGATCTTCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113552.9 |
||
| CDS-3UTR CAA 90 bp | GGTAAATGTCACGTTCCTTTTATTTCCATCTCTAAGTCATCTGCAGGGCAGGTTATGAATGGCCAGAGCTaGCCTCTGGACTTGCCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GKCHVPFISISKSSAGQVMNGQS*PLDLPP Trigger: TGGCGGCAAGTCCAGAGGCAAGCTCTGGCCATTCAT...AACCTGCCCTGCAGATGACTTAGAGATGGAAATAAAAGGAACGTGACATTTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 |
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| CDS GCA 90 bp | CAGGCTTGCCTTCTTTGGAGCTGGAAAGGCTGTTGTCTGACACTGTaGGTTTCATTGGCTGTGTGTAATCTTCGAATTCAATGTCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: QACLLWSWKGCCLTL*VSLAVCNLRIQCLQ Trigger: CTGGAGACATTGAATTCGAAGATTACACACAGCCAATGAAACGCACAGTGTCAGACAACAGCCTTTCCAGCTCCAAAGAAGGCAAGCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENSMUST00000073879.12 ENSMUST00000075326.11 ENSMUST00000100207.9 ENSMUST00000100208.9 ENSMUST00000113552.9 ENSMUST00000113555.8 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 ENSMUST00000128431.3 |
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| CDS-3UTR CAA 90 bp | AACCAGTTTAAGCCAGAGGTAAACACGTCCACATCTAAGCTAACGCAGTTCGATTCCGCCTTGGTCACGTaGATGTCAGCGTCCATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: NQFKPEVNTSTSKLTQFDSALVT*MSASIF Trigger: GAAAATGGACGCTGACATCAACGTGACCAAGGCGGA...ATCGAACTGCGTTAGCTTAGATGTGGACGTGTTTACCTCTGGCTTAAACTGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113552.9 |
||
| CDS-3UTR CAA 90 bp | TCTGGTTTTGTAAGACTTCCCTGTCTTTCATCCTCTGACTTGATGCTAAGCTACGCTGTCCTCTGCCATTaGCTGGCGTATCTGAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SGFVRLPCLSSSDLMLSYAVLCH*LAYLSL Trigger: CAAGCTCAGATACGCCAGCAAATGGCAGAGGACAGC...GTAGCTTAGCATCAAGTCAGAGGATGAAAGACAGGGAAGTCTTACAAAACCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CAA 90 bp | TCACAAAATGTCTGTAATACTGGCCCCAATGCATGGATGTCAGCACTTCCACAATCAGGCTTGCCTTCTTaGGAGCTGGAAAGGCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SQNVCNTGPNAWMSALPQSGLPS*ELERLL Trigger: CAACAGCCTTTCCAGCTCCAAAGAAGGCAAGCCTGA...TTGTGGAAGTGCTGACATCCATGCATTGGGGCCAGTATTACAGACATTTTGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CAA 90 bp | TCACAAAATGTCTGTAATACTGGCCCCAATGCATGGATGTCAGCACTTCCACAATGCTCAGGTGGGAAGTaGCTGAAGTCTTCTGGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SQNVCNTGPNAWMSALPQCSGGK*LKSSGV Trigger: CACACCAGAAGACTTCAGCAACTTCCCACCTGAGCA...TTGTGGAAGTGCTGACATCCATGCATTGGGGCCAGTATTACAGACATTTTGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CAA 90 bp | CTACAAGAGGCACAAGGTCTTTGGTGGGAACAGAGGAGAGTCCTCAAATGCTACATCTCCGTCCTCTCCTaGACAAACTTGATGTATTTC | + |
|
Preference number: 5 (lower is better) Translates to: LQEAQGLWWEQRRVLKCYISVLS*TNLMYF Trigger: GAAATACATCAAGTTTGTCAAGGAGAGGACGGAGAT...GTAGCATTTGAGGACTCTCCTCTGTTCCCACCAAAGACCTTGTGCCTCTTGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CAA 90 bp | CTCTCCATTTTACCTTTGTGGCAAGTCTTTCCTTGTCCTTCATGCATTAATGAGTCCGCCTTGGTCACGTaGATGTCAGCGTCCATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LSILPLWQVFPCPSCINESALVT*MSASIF Trigger: GAAAATGGACGCTGACATCAACGTGACCAAGGCGGA...CTCATTAATGCATGAAGGACAAGGAAAGACTTGCCACAAAGGTAAAATGGAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CAA 90 bp | GAGTGCTCTCTACTGAAAGCACTTTGTTTGGTTTTAATTCCACCTCCAGAGTCAAATCTGAGCTCAGGCTaGCCTTCTTTGGAGCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: ECSLLKALCLVLIPPPESNLSSG*PSLELE Trigger: TTCCAGCTCCAAAGAAGGCAAGCCTGAGCTCAGATT...TGACTCTGGAGGTGGAATTAAAACCAAACAAAGTGCTTTCAGTAGAGAGCACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 |
||
| CDS-3UTR CAA 90 bp | CTACAAGAGGCACAAGGTCTTTGGTGGGAACAGAGGAGAGTCCTCAAATGCTACATAAGCTTGTTTTTCTaGATGAATGGCCAGAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LQEAQGLWWEQRRVLKCYISLFF*MNGQSL Trigger: CAAGCTCTGGCCATTCATCAAGAAAAACAAGCTTAT...GTAGCATTTGAGGACTCTCCTCTGTTCCCACCAAAGACCTTGTGCCTCTTGTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113560.8 |
||
| CDS-3UTR CAA 90 bp | AAATGTCACGTTCCTTTTATTTCCATCTCTAAGTCATCTGCAGGGCAGGTTCTTAATCTGAGCTCAGGCTaGCCTTCTTTGGAGCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: KCHVPFISISKSSAGQVLNLSSG*PSLELE Trigger: TTCCAGCTCCAAAGAAGGCAAGCCTGAGCTCAGATT...AAGAACCTGCCCTGCAGATGACTTAGAGATGGAAATAAAAGGAACGTGACATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073879.12 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS-3UTR CAA 90 bp | GGTAAATGTCACGTTCCTTTTATTTCCATCTCTAAGTCATCTGCAGGGCAGGTTCAGTGGATTTTGGGTTaGGAGGTCATGAACTCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: GKCHVPFISISKSSAGQVQWILG*EVMNSL Trigger: CAACGAGTTCATGACCTCCAAACCCAAAATCCACTG...AACCTGCCCTGCAGATGACTTAGAGATGGAAATAAAAGGAACGTGACATTTACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113559.10 ENSMUST00000113560.8 |
||
| CDS-3UTR CAA 90 bp | GATCCAAAGCAAGTAAAACACAAACCATTAATATCGATGCCACGGTACAAAAGATCAGGCTTGCCTTCTTaGGAGCTGGAAAGGCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: DPKQVKHKPLISMPRYKRSGLPS*ELERLL Trigger: CAACAGCCTTTCCAGCTCCAAAGAAGGCAAGCCTGA...TCTTTTGTACCGTGGCATCGATATTAATGGTTTGTGTTTTACTTGCTTTGGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113552.9 |
||
| CDS-3UTR CAA 90 bp | GGTAAATGTCACGTTCCTTTTATTTCCATCTCTAAGTCATCTGCAGGGCAGGTTATCTCCGTCCTCTCCTaGACAAACTTGATGTATTTC | + |
|
Preference number: 5 (lower is better) Translates to: GKCHVPFISISKSSAGQVISVLS*TNLMYF Trigger: GAAATACATCAAGTTTGTCAAGGAGAGGACGGAGAT...AACCTGCCCTGCAGATGACTTAGAGATGGAAATAAAAGGAACGTGACATTTACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073879.12 ENSMUST00000113560.8 ENSMUST00000113562.9 |
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| CDS CCA 72 bp | CAGTCCACTCTGCCGGCGTGCCTGCTCACTCCGAGCTaGGAGTCTGCCTTCTACCTCAGCCAGCCAGGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: QSTLPACLLTPS*ESAFYLSQPGL Trigger: GAGGCCTGGCTGGCTGAGGTAGAAGGCAGACTCCCAGCTCGGAGTGAGCAGGCACGCCGGCAGAGTGGACTG 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENSMUST00000073879.12 ENSMUST00000075326.11 ENSMUST00000100207.9 ENSMUST00000100208.9 ENSMUST00000113555.8 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 ENSMUST00000128431.3 ENSMUST00000128500.8 |
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| CDS TCA 72 bp | CGGCCGCCTTCACTATCCCGTCCAGGCACTTCCCGATaGTGGGTATCACCTGCCGGTCCACCTCTGCGTACG | + |
|
Preference number: 6 (lower is better) Translates to: RPPSLSRPGTSR*WVSPAGPPLRT Trigger: CGTACGCAGAGGTGGACCGGCAGGTGATACCCATCATCGGGAAGTGCCTGGACGGGATAGTGAAGGCGGCCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000073879.12 ENSMUST00000075326.11 ENSMUST00000100207.9 ENSMUST00000100208.9 ENSMUST00000113552.9 ENSMUST00000113555.8 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| CDS CCA 72 bp | CGGTCCTGGGCACAGTTAGTGACCGTCTGGTGTGTCTaGCCATCATACAGTCCACTCTGCCGGCGTGCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: RSWAQLVTVWCV*PSYSPLCRRAC Trigger: GCAGGCACGCCGGCAGAGTGGACTGTATGATGGCCAGACACACCAGACGGTCACTAACTGTGCCCAGGACCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENSMUST00000073879.12 ENSMUST00000075326.11 ENSMUST00000100207.9 ENSMUST00000100208.9 ENSMUST00000113555.8 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 ENSMUST00000128431.3 ENSMUST00000128500.8 |
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| CDS CCA 72 bp | GGGCTCTCCCGGTCCTGGGCACAGTTAGTGACCGTCTaGTGTGTCTGGCCATCATACAGTCCACTCTGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: GLSRSWAQLVTV*CVWPSYSPLCR Trigger: CCGGCAGAGTGGACTGTATGATGGCCAGACACACCAGACGGTCACTAACTGTGCCCAGGACCGGGAGAGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000073879.12 ENSMUST00000075326.11 ENSMUST00000100207.9 ENSMUST00000100208.9 ENSMUST00000113555.8 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000128431.3 ENSMUST00000128500.8 |
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| CDS CAA 90 bp | ATCGTCGAAATCCGGGGCCAGGACCTTGTGCTCGCTCTCCTGGCTTaGCTCCTCTGTGTAACTACCATCTGGGCTCTCCCGGTCCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: IVEIRGQDLVLALLA*LLCVTTIWALPVLG Trigger: GCCCAGGACCGGGAGAGCCCAGATGGTAGTTACACAGAGGAGCAAAGCCAGGAGAGCGAGCACAAGGTCCTGGCCCCGGATTTCGACGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000073879.12 ENSMUST00000075326.11 ENSMUST00000100207.9 ENSMUST00000100208.9 ENSMUST00000113555.8 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000128431.3 ENSMUST00000128500.8 |
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| CDS GCA 72 bp | GTCTGGCCATCATACAGTCCACTCTGCCGGCGTGCCTaGTCACTCCGAGCTGGGAGTCTGCCTTCTACCTCA | + |
|
Preference number: 6 (lower is better) Translates to: VWPSYSPLCRRA*SLRAGSLPSTS Trigger: TGAGGTAGAAGGCAGACTCCCAGCTCGGAGTGAGCAGGCACGCCGGCAGAGTGGACTGTATGATGGCCAGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENSMUST00000073879.12 ENSMUST00000075326.11 ENSMUST00000100207.9 ENSMUST00000100208.9 ENSMUST00000113555.8 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 ENSMUST00000128431.3 ENSMUST00000128500.8 |
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| CDS GCA 72 bp | GTGTGTCTGGCCATCATACAGTCCACTCTGCCGGCGTaGCTGCTCACTCCGAGCTGGGAGTCTGCCTTCTAC | + |
|
Preference number: 6 (lower is better) Translates to: VCLAIIQSTLPA*LLTPSWESAFY Trigger: GTAGAAGGCAGACTCCCAGCTCGGAGTGAGCAGGCACGCCGGCAGAGTGGACTGTATGATGGCCAGACACAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENSMUST00000073879.12 ENSMUST00000075326.11 ENSMUST00000100207.9 ENSMUST00000100208.9 ENSMUST00000113555.8 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 ENSMUST00000128431.3 ENSMUST00000128500.8 |
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| CDS CCA 72 bp | CATGAACTCGTTGAAGCGGTGGGAGAGGGGTTCCTTTaGCTGCTTGGGAGACTGGGGGCCGTTGGGAACAGC | + |
|
Preference number: 6 (lower is better) Translates to: HELVEAVGEGFL*LLGRLGAVGNS Trigger: GCTGTTCCCAACGGCCCCCAGTCTCCCAAGCAGCCAAAGGAACCCCTCTCCCACCGCTTCAACGAGTTCATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000100208.9 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000128431.3 |
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| CDS CCA 72 bp | CTGCTCTCCCGGTCCTGGGCACAGTTAGTGACCGTCTaGTGTGTCTGGCCATCATACAGTCCACTCTGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: LLSRSWAQLVTV*CVWPSYSPLCR Trigger: CCGGCAGAGTGGACTGTATGATGGCCAGACACACCAGACGGTCACTAACTGTGCCCAGGACCGGGAGAGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113564.9 |
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| CDS CAA 90 bp | ATCGTCGAAATCCGGGGCCAGGACCTTGTGCTCGCTCTCCTGGCTTaGCTCCTCTGTGTAACTACCATCTGGGCTGCTCTCCCGGTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: IVEIRGQDLVLALLA*LLCVTTIWAALPVL Trigger: CAGGACCGGGAGAGCAGCCCAGATGGTAGTTACACAGAGGAGCAAAGCCAGGAGAGCGAGCACAAGGTCCTGGCCCCGGATTTCGACGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113564.9 |
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| CDS GCA 72 bp | ATCCCGTCCAGGCACTTCCCGATGATGGGTATCACCTaGCGGTCCACCTCTGCGTACGTCTTCATGGACTCC | + |
|
Preference number: 6 (lower is better) Translates to: IPSRHFPMMGIT*RSTSAYVFMDS Trigger: GGAGTCCATGAAGACGTACGCAGAGGTGGACCGGCAGGTGATACCCATCATCGGGAAGTGCCTGGACGGGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000073879.12 ENSMUST00000075326.11 ENSMUST00000100207.9 ENSMUST00000100208.9 ENSMUST00000113552.9 ENSMUST00000113555.8 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| CDS CCA 72 bp | GTATCACCTGCCGGTCCACCTCTGCGTACGTCTTCATaGACTCCCCAATACGCACAATCCGCCTCTCCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: VSPAGPPLRTSS*TPQYAQSASPP Trigger: TGGAGGAGAGGCGGATTGTGCGTATTGGGGAGTCCATGAAGACGTACGCAGAGGTGGACCGGCAGGTGATAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000073879.12 ENSMUST00000075326.11 ENSMUST00000100207.9 ENSMUST00000100208.9 ENSMUST00000113552.9 ENSMUST00000113555.8 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| CDS CCA 72 bp | GCTCTCCTGGCTTTGCTCCTCTGTGTAACTACCATCTaGGCTCTCCCGGTCCTGGGCACAGTTAGTGACCGT | + |
|
Preference number: 6 (lower is better) Translates to: ALLALLLCVTTI*ALPVLGTVSDR Trigger: ACGGTCACTAACTGTGCCCAGGACCGGGAGAGCCCAGATGGTAGTTACACAGAGGAGCAAAGCCAGGAGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000073879.12 ENSMUST00000075326.11 ENSMUST00000100207.9 ENSMUST00000100208.9 ENSMUST00000113555.8 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000128431.3 ENSMUST00000128500.8 |
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| CDS CCA 72 bp | GCTCTCCTGGCTTTGCTCCTCTGTGTAACTACCATCTaGGCTGCTCTCCCGGTCCTGGGCACAGTTAGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: ALLALLLCVTTI*AALPVLGTVSD Trigger: GTCACTAACTGTGCCCAGGACCGGGAGAGCAGCCCAGATGGTAGTTACACAGAGGAGCAAAGCCAGGAGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113564.9 |
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| CDS CAA 90 bp | GGCCAGAGCTTGCCTCTGGACTTGCCGCCAAATCTGAGCTCAGGCTaGCCTTCTTTGGAGCTGGAAAGGCTGTTGTCTGACACTGTGCGT | + |
|
Preference number: 6 (lower is better) Translates to: GQSLPLDLPPNLSSG*PSLELERLLSDTVR Trigger: ACGCACAGTGTCAGACAACAGCCTTTCCAGCTCCAAAGAAGGCAAGCCTGAGCTCAGATTTGGCGGCAAGTCCAGAGGCAAGCTCTGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENSMUST00000073879.12 ENSMUST00000075326.11 ENSMUST00000100207.9 ENSMUST00000100208.9 ENSMUST00000113552.9 ENSMUST00000113555.8 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 ENSMUST00000128431.3 |
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| CDS CAA 90 bp | AGGCTCCGGAAGCAGTGGATTTTGGGTTTGGAGGTCATGAACTCGTaGAAGCGGTGGGAGAGGGGTTCCTTTGGCTGCTTGGGAGACTGG | + |
|
Preference number: 6 (lower is better) Translates to: RLRKQWILGLEVMNS*KRWERGSFGCLGDW Trigger: CCAGTCTCCCAAGCAGCCAAAGGAACCCCTCTCCCACCGCTTCAACGAGTTCATGACCTCCAAACCCAAAATCCACTGCTTCCGGAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000100208.9 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000128431.3 |
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| CDS TCA 72 bp | ATGGCCAGAGCTTGCCTCTGGACTTGCCGCCAAATCTaGGCTCAGGCTTGCCTTCTTTGGAGCTGGAAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: MARACLWTCRQI*AQACLLWSWKG Trigger: GCCTTTCCAGCTCCAAAGAAGGCAAGCCTGAGCTCAGATTTGGCGGCAAGTCCAGAGGCAAGCTCTGGCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENSMUST00000073879.12 ENSMUST00000075326.11 ENSMUST00000100207.9 ENSMUST00000100208.9 ENSMUST00000113552.9 ENSMUST00000113555.8 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 ENSMUST00000128431.3 |
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| CDS CAA 90 bp | AGGCTCCGGAAGCAGTGGATTTTGGGTTTGGAGGTCATGAACTCGTaGAAGCGGTGGGAGAGGGGTTCCTTTGGCTGCTTGGGAGACTTG | + |
|
Preference number: 6 (lower is better) Translates to: RLRKQWILGLEVMNS*KRWERGSFGCLGDL Trigger: CAAGTCTCCCAAGCAGCCAAAGGAACCCCTCTCCCACCGCTTCAACGAGTTCATGACCTCCAAACCCAAAATCCACTGCTTCCGGAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075326.11 ENSMUST00000113555.8 |
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| CDS GCA 72 bp | GTCACGTTGATGTCAGCGTCCATTTTCTCGAAGTACTaGTGTGCCCGGTCGGCTTCCTTACAGTCCCGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: VTLMSASIFSKY*CARSASLQSRS Trigger: TGAGCGGGACTGTAAGGAAGCCGACCGGGCACAGCAGTACTTCGAGAAAATGGACGCTGACATCAACGTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENSMUST00000073879.12 ENSMUST00000075326.11 ENSMUST00000100207.9 ENSMUST00000100208.9 ENSMUST00000113552.9 ENSMUST00000113555.8 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 ENSMUST00000128500.8 ENSMUST00000149196.2 |
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| CDS GCA 72 bp | CTTCCCGATGATGGGTATCACCTGCCGGTCCACCTCTaGGTACGTCTTCATGGACTCCCCAATACGCACAAT | + |
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Preference number: 6 (lower is better) Translates to: LPDDGYHLPVHL*VRLHGLPNTHN Trigger: ATTGTGCGTATTGGGGAGTCCATGAAGACGTACGCAGAGGTGGACCGGCAGGTGATACCCATCATCGGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000073879.12 ENSMUST00000075326.11 ENSMUST00000100207.9 ENSMUST00000100208.9 ENSMUST00000113552.9 ENSMUST00000113555.8 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| CDS GCA 72 bp | AGGAAGTGGGGACGTAACCCTCCTCGTCTTCATTTCTaGGGATGCGAGTCCACCCATCGCCTTTGTCCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: RKWGRNPPRLHF*GCESTHRLCPL Trigger: AAGAGGACAAAGGCGATGGGTGGACTCGCATCCGCAGAAATGAAGACGAGGAGGGTTACGTCCCCACTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000073879.12 ENSMUST00000075326.11 ENSMUST00000100207.9 ENSMUST00000100208.9 ENSMUST00000113555.8 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 ENSMUST00000128500.8 |
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| CDS CAA 72 bp | CCACGCTTTAGGCTCCGGAAGCAGTGGATTTTGGGTTaGGAGGTCATGAACTCGTTGAAGCGGTGGGAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: PRFRLRKQWILG*EVMNSLKRWER Trigger: CCTCTCCCACCGCTTCAACGAGTTCATGACCTCCAAACCCAAAATCCACTGCTTCCGGAGCCTAAAGCGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000075326.11 ENSMUST00000100208.9 ENSMUST00000113555.8 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000128431.3 |
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| CDS CAA 72 bp | ACACCCCCACGCTTTAGGCTCCGGAAGCAGTGGATTTaGGGTTTGGAGGTCATGAACTCGTTGAAGCGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: TPPRFRLRKQWI*GLEVMNSLKRW Trigger: CCACCGCTTCAACGAGTTCATGACCTCCAAACCCAAAATCCACTGCTTCCGGAGCCTAAAGCGTGGGGGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075326.11 ENSMUST00000100208.9 ENSMUST00000113559.10 |
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| CDS CAA 72 bp | GGGAAGTTGCTGAAGTCTTCTGGTGTGACACCCAGCTaGAGAGAAAGCCCACGCTTTAGGCTCCGGAAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: GKLLKSSGVTPS*RESPRFRLRKQ Trigger: CTGCTTCCGGAGCCTAAAGCGTGGGCTTTCTCTCAAGCTGGGTGTCACACCAGAAGACTTCAGCAACTTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113555.8 ENSMUST00000113560.8 |
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| CDS CAA 72 bp | GGGGGAGGCTTGTTTTTCTTGATGAATGGCCAGAGCTaGCCTCTGGACTTGCCGCCAAATCTGAGCTCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: GGGLFFLMNGQS*PLDLPPNLSSG Trigger: GCCTGAGCTCAGATTTGGCGGCAAGTCCAGAGGCAAGCTCTGGCCATTCATCAAGAAAAACAAGCCTCCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000113559.10 ENSMUST00000128431.3 |
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| CDS CAA 72 bp | GCTGTCCTCTGCCATTTGCTGGCGTATCTGAGCTTGTaGTCGTGCCGATTTCCTCTCCTGCTTCAGCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: AVLCHLLAYLSL*SCRFPLLLQLL Trigger: CAGGAGCTGAAGCAGGAGAGGAAATCGGCACGACAACAAGCTCAGATACGCCAGCAAATGGCAGAGGACAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136181.8 |
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| CDS CAA 90 bp | GTGCCCGGTCGGCTTCCTTACAGTCCCGCTCAAACCTCCTCTTACTaGACTCCAGTTGCTTCCAACACGTTTCTATGTGCTGCTGAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: VPGRLPYSPAQTSSY*TPVASNTFLCAAEP Trigger: AGGCTCAGCAGCACATAGAAACGTGTTGGAAGCAACTGGAGTCAAGTAAGAGGAGGTTTGAGCGGGACTGTAAGGAAGCCGACCGGGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000073879.12 ENSMUST00000075326.11 ENSMUST00000100207.9 ENSMUST00000100208.9 ENSMUST00000113552.9 ENSMUST00000113555.8 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 ENSMUST00000128500.8 ENSMUST00000149196.2 |
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| CDS CAA 90 bp | CGGTGGGAGAGGGGTTCCTTTGGCTGCTTGGGAGACTTGTTTTTCTaGATGAATGGCCAGAGCTTGCCTCTGGACTTGCCGCCAAATCTG | + |
|
Preference number: 6 (lower is better) Translates to: RWERGSFGCLGDLFF*MNGQSLPLDLPPNL Trigger: CAGATTTGGCGGCAAGTCCAGAGGCAAGCTCTGGCCATTCATCAAGAAAAACAAGTCTCCCAAGCAGCCAAAGGAACCCCTCTCCCACCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075326.11 ENSMUST00000113555.8 |
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| CDS CAA 90 bp | TCGTTGAAGCGGTGGGAGAGGGGTTCCTTTGGCTGCTTGGGAGACTaGTTTTTCTTGATGAATGGCCAGAGCTTGCCTCTGGACTTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: SLKRWERGSFGCLGD*FFLMNGQSLPLDLP Trigger: CGGCAAGTCCAGAGGCAAGCTCTGGCCATTCATCAAGAAAAACAAGTCTCCCAAGCAGCCAAAGGAACCCCTCTCCCACCGCTTCAACGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075326.11 ENSMUST00000113555.8 |
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| CDS CAA 90 bp | CCCTCCTCGTCTTCATTTCTGCGGATGCGAGTCCACCCATCGCCTTaGTCCTCTTCAATCACGCTCAGCGTCTCTCCTTCAACTACGGAA | + |
|
Preference number: 6 (lower is better) Translates to: PSSSSFLRMRVHPSP*SSSITLSVSPSTTE Trigger: TTCCGTAGTTGAAGGAGAGACGCTGAGCGTGATTGAAGAGGACAAAGGCGATGGGTGGACTCGCATCCGCAGAAATGAAGACGAGGAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000073879.12 ENSMUST00000075326.11 ENSMUST00000100207.9 ENSMUST00000100208.9 ENSMUST00000113555.8 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 ENSMUST00000128500.8 |
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| CDS GCA 72 bp | GTTGATGTCAGCGTCCATTTTCTCGAAGTACTGCTGTaGCCGGTCGGCTTCCTTACAGTCCCGCTCAAACCT | + |
|
Preference number: 6 (lower is better) Translates to: VDVSVHFLEVLL*PVGFLTVPLKP Trigger: AGGTTTGAGCGGGACTGTAAGGAAGCCGACCGGGCACAGCAGTACTTCGAGAAAATGGACGCTGACATCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENSMUST00000073879.12 ENSMUST00000075326.11 ENSMUST00000100207.9 ENSMUST00000100208.9 ENSMUST00000113552.9 ENSMUST00000113555.8 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 ENSMUST00000128500.8 ENSMUST00000149196.2 |
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| CDS GCA 72 bp | TGGGGACGTAACCCTCCTCGTCTTCATTTCTGCGGATaGGAGTCCACCCATCGCCTTTGTCCTCTTCAATCA | + |
|
Preference number: 6 (lower is better) Translates to: WGRNPPRLHFCG*ESTHRLCPLQS Trigger: TGATTGAAGAGGACAAAGGCGATGGGTGGACTCGCATCCGCAGAAATGAAGACGAGGAGGGTTACGTCCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000073879.12 ENSMUST00000075326.11 ENSMUST00000100207.9 ENSMUST00000100208.9 ENSMUST00000113555.8 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 ENSMUST00000128500.8 |
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| CDS CCA 72 bp | GGTGTGACACCCCCACGCTTTAGGCTCCGGAAGCAGTaGATTTTGGGTTTGGAGGTCATGAACTCGTTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: GVTPPRFRLRKQ*ILGLEVMNSLK Trigger: CTTCAACGAGTTCATGACCTCCAAACCCAAAATCCACTGCTTCCGGAGCCTAAAGCGTGGGGGTGTCACACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000075326.11 ENSMUST00000100208.9 ENSMUST00000113559.10 |
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| CDS CCA 72 bp | ATTTTGGGTTTGGAGGTCATGAACTCGTTGAAGCGGTaGGAGAGGGGTTCCTTTGGCTGCTTGGGAGACTGG | + |
|
Preference number: 6 (lower is better) Translates to: ILGLEVMNSLKR*ERGSFGCLGDW Trigger: CCAGTCTCCCAAGCAGCCAAAGGAACCCCTCTCCCACCGCTTCAACGAGTTCATGACCTCCAAACCCAAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000100208.9 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000128431.3 |
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| CDS CAA 72 bp | GCTGTCCTCTGCCATTTGCTGGCGTATCTGAGCTTGTaGTCGTGCCTTTTCCACATCCGCCTTGGTCACGTT | + |
|
Preference number: 6 (lower is better) Translates to: AVLCHLLAYLSL*SCLFHIRLGHV Trigger: AACGTGACCAAGGCGGATGTGGAAAAGGCACGACAACAAGCTCAGATACGCCAGCAAATGGCAGAGGACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENSMUST00000073879.12 ENSMUST00000075326.11 ENSMUST00000100207.9 ENSMUST00000100208.9 ENSMUST00000113552.9 ENSMUST00000113555.8 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 ENSMUST00000149196.2 |
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| CDS CAA 72 bp | GACTTGCCGCCAAATCTGAGCTCAGGCTTGCCTTCTTaGGAGCTGGAAAGGCTGTTGTCTGACACTGTGCGT | + |
|
Preference number: 6 (lower is better) Translates to: DLPPNLSSGLPS*ELERLLSDTVR Trigger: ACGCACAGTGTCAGACAACAGCCTTTCCAGCTCCAAAGAAGGCAAGCCTGAGCTCAGATTTGGCGGCAAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENSMUST00000073879.12 ENSMUST00000075326.11 ENSMUST00000100207.9 ENSMUST00000100208.9 ENSMUST00000113552.9 ENSMUST00000113555.8 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 ENSMUST00000128431.3 |
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| CDS CAA 72 bp | CCACGCAGGGTCCAAATGGCCAGTACCTTGTTTTTCTaGATGAATGGCCAGAGCTTGCCTCTGGACTTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: PRRVQMASTLFF*MNGQSLPLDLP Trigger: CGGCAAGTCCAGAGGCAAGCTCTGGCCATTCATCAAGAAAAACAAGGTACTGGCCATTTGGACCCTGCGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113552.9 |
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| CDS CAA 72 bp | GAAAGCCCACGCTTTAGGCTCCGGAAGCAGTGGATTTaGGGTTTGGAGGTCATGAACTCGTTGAAGCGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: ESPRFRLRKQWI*GLEVMNSLKRW Trigger: CCACCGCTTCAACGAGTTCATGACCTCCAAACCCAAAATCCACTGCTTCCGGAGCCTAAAGCGTGGGCTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113555.8 ENSMUST00000113560.8 |
||
| CDS CAA 90 bp | TTGCCTCTGGACTTGCCGCCAAATCTGAGCTCAGGCTTGCCTTCTTaGGAGCTGGAAAGGCTGTTGTCTGACACTGTGCGTTTCATTGGC | + |
|
Preference number: 6 (lower is better) Translates to: LPLDLPPNLSSGLPS*ELERLLSDTVRFIG Trigger: GCCAATGAAACGCACAGTGTCAGACAACAGCCTTTCCAGCTCCAAAGAAGGCAAGCCTGAGCTCAGATTTGGCGGCAAGTCCAGAGGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENSMUST00000073879.12 ENSMUST00000075326.11 ENSMUST00000100207.9 ENSMUST00000100208.9 ENSMUST00000113552.9 ENSMUST00000113555.8 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 ENSMUST00000128431.3 |
||
| CDS CAA 90 bp | TGCTCAGGTGGGAAGTTGCTGAAGTCTTCTGGTGTGACACCCAGCTaGAGAGAAAGCCCACGCTTTAGGCTCCGGAAGCAGTGGATTTTG | + |
|
Preference number: 6 (lower is better) Translates to: CSGGKLLKSSGVTPS*RESPRFRLRKQWIL Trigger: CAAAATCCACTGCTTCCGGAGCCTAAAGCGTGGGCTTTCTCTCAAGCTGGGTGTCACACCAGAAGACTTCAGCAACTTCCCACCTGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113555.8 ENSMUST00000113560.8 |
||
| CDS CAA 90 bp | AAGTCTTCTGGTGTGACACCCTTTTCCACATCCGCCTTGGTCACGTaGATGTCAGCGTCCATTTTCTCGAAGTACTGCTGTGCCCGGTCG | + |
|
Preference number: 6 (lower is better) Translates to: KSSGVTPFSTSALVT*MSASIFSKYCCARS Trigger: CGACCGGGCACAGCAGTACTTCGAGAAAATGGACGCTGACATCAACGTGACCAAGGCGGATGTGGAAAAGGGTGTCACACCAGAAGACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128500.8 |
||
| CDS TCA 72 bp | TCTGCTTTGCTGTCCTCTGCCATTTGCTGGCGTATCTaGGCTTGTTGTCGTGCCTTTTCCACATCCGCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SALLSSAICWRI*ACCRAFSTSAL Trigger: CAAGGCGGATGTGGAAAAGGCACGACAACAAGCTCAGATACGCCAGCAAATGGCAGAGGACAGCAAAGCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENSMUST00000073879.12 ENSMUST00000075326.11 ENSMUST00000100207.9 ENSMUST00000100208.9 ENSMUST00000113552.9 ENSMUST00000113555.8 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 ENSMUST00000149196.2 |
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| CDS TCA 72 bp | TCTGCTTTGCTGTCCTCTGCCATTTGCTGGCGTATCTaGGCTTGTTGTCGTGCCGATTTCCTCTCCTGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SALLSSAICWRI*ACCRADFLSCF Trigger: GAAGCAGGAGAGGAAATCGGCACGACAACAAGCTCAGATACGCCAGCAAATGGCAGAGGACAGCAAAGCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136181.8 |
||
| CDS CCA 72 bp | ATTTTGGGTTTGGAGGTCATGAACTCGTTGAAGCGGTaGGAGAGGGGTTCCTTTGGCTGCTTGGGAGACTTG | + |
|
Preference number: 6 (lower is better) Translates to: ILGLEVMNSLKR*ERGSFGCLGDL Trigger: CAAGTCTCCCAAGCAGCCAAAGGAACCCCTCTCCCACCGCTTCAACGAGTTCATGACCTCCAAACCCAAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075326.11 ENSMUST00000113555.8 |
||
| CDS CAA 72 bp | TTTGCTGTCCTCTGCCATTTGCTGGCGTATCTGAGCTaGTTGTCGTGCCTTTTCCACATCCGCCTTGGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: FAVLCHLLAYLS*LSCLFHIRLGH Trigger: GTGACCAAGGCGGATGTGGAAAAGGCACGACAACAAGCTCAGATACGCCAGCAAATGGCAGAGGACAGCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENSMUST00000073879.12 ENSMUST00000075326.11 ENSMUST00000100207.9 ENSMUST00000100208.9 ENSMUST00000113552.9 ENSMUST00000113555.8 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 ENSMUST00000149196.2 |
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| CDS CAA 72 bp | AGGGGTTCCTTTGGCTGCTTGGGAGACTTGTTTTTCTaGATGAATGGCCAGAGCTTGCCTCTGGACTTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: RGSFGCLGDLFF*MNGQSLPLDLP Trigger: CGGCAAGTCCAGAGGCAAGCTCTGGCCATTCATCAAGAAAAACAAGTCTCCCAAGCAGCCAAAGGAACCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075326.11 ENSMUST00000113555.8 |
||
| CDS CAA 72 bp | AAGCAGTGGATTTTGGGTTTGGAGGTCATGAACTCGTaGAAGCGGTGGGAGAGGGGTTCCTTTGGCTGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: KQWILGLEVMNS*KRWERGSFGCL Trigger: CAAGCAGCCAAAGGAACCCCTCTCCCACCGCTTCAACGAGTTCATGACCTCCAAACCCAAAATCCACTGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000075326.11 ENSMUST00000100208.9 ENSMUST00000113555.8 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000128431.3 |
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| CDS CAA 72 bp | TCTTCATTTCTGCGGATGCGAGTCCACCCATCGCCTTaGTCCTCTTCAATCACGCTCAGCGTCTCTCCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: SSFLRMRVHPSP*SSSITLSVSPS Trigger: TGAAGGAGAGACGCTGAGCGTGATTGAAGAGGACAAAGGCGATGGGTGGACTCGCATCCGCAGAAATGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000073879.12 ENSMUST00000075326.11 ENSMUST00000100207.9 ENSMUST00000100208.9 ENSMUST00000113555.8 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 ENSMUST00000128500.8 |
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| CDS CAA 72 bp | GTGACACCCTTGTTTTTCTTGATGAATGGCCAGAGCTaGCCTCTGGACTTGCCGCCAAATCTGAGCTCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: VTPLFFLMNGQS*PLDLPPNLSSG Trigger: GCCTGAGCTCAGATTTGGCGGCAAGTCCAGAGGCAAGCTCTGGCCATTCATCAAGAAAAACAAGGGTGTCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000073879.12 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| CDS CAA 72 bp | GCCAGTACCTTGTTTTTCTTGATGAATGGCCAGAGCTaGCCTCTGGACTTGCCGCCAAATCTGAGCTCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: ASTLFFLMNGQS*PLDLPPNLSSG Trigger: GCCTGAGCTCAGATTTGGCGGCAAGTCCAGAGGCAAGCTCTGGCCATTCATCAAGAAAAACAAGGTACTGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113552.9 |
||
| CDS CAA 72 bp | TTTGCTGTCCTCTGCCATTTGCTGGCGTATCTGAGCTaGTTGTCGTGCCGATTTCCTCTCCTGCTTCAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: FAVLCHLLAYLS*LSCRFPLLLQL Trigger: GAGCTGAAGCAGGAGAGGAAATCGGCACGACAACAAGCTCAGATACGCCAGCAAATGGCAGAGGACAGCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136181.8 |
||
| CDS CAA 90 bp | GTCATGAACTCGTTGAAGCGGTGGGAGAGGGGTTCCTTTGGCTGCTaGGGAGACTTGTTTTTCTTGATGAATGGCCAGAGCTTGCCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: VMNSLKRWERGSFGC*GDLFFLMNGQSLPL Trigger: CAGAGGCAAGCTCTGGCCATTCATCAAGAAAAACAAGTCTCCCAAGCAGCCAAAGGAACCCCTCTCCCACCGCTTCAACGAGTTCATGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075326.11 ENSMUST00000113555.8 |
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| CDS CAA 90 bp | GGAGGCTTGTTTTTCTTGATGAATGGCCAGAGCTTGCCTCTGGACTaGCCGCCAAATCTGAGCTCAGGCTTGCCTTCTTTGGAGCTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: GGLFFLMNGQSLPLD*PPNLSSGLPSLELE Trigger: TTCCAGCTCCAAAGAAGGCAAGCCTGAGCTCAGATTTGGCGGCAAGTCCAGAGGCAAGCTCTGGCCATTCATCAAGAAAAACAAGCCTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113559.10 ENSMUST00000128431.3 |
||
| CDS CAA 90 bp | GTAATCTGCTTTGCTGTCCTCTGCCATTTGCTGGCGTATCTGAGCTaGTTGTCGTGCCTTTTCCACATCCGCCTTGGTCACGTTGATGTC | + |
|
Preference number: 6 (lower is better) Translates to: VICFAVLCHLLAYLS*LSCLFHIRLGHVDV Trigger: GACATCAACGTGACCAAGGCGGATGTGGAAAAGGCACGACAACAAGCTCAGATACGCCAGCAAATGGCAGAGGACAGCAAAGCAGATTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENSMUST00000073879.12 ENSMUST00000075326.11 ENSMUST00000100207.9 ENSMUST00000100208.9 ENSMUST00000113552.9 ENSMUST00000113555.8 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 ENSMUST00000149196.2 |
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| CDS CAA 90 bp | GGAGACTTGTTTTTCTTGATGAATGGCCAGAGCTTGCCTCTGGACTaGCCGCCAAATCTGAGCTCAGGCTTGCCTTCTTTGGAGCTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: GDLFFLMNGQSLPLD*PPNLSSGLPSLELE Trigger: TTCCAGCTCCAAAGAAGGCAAGCCTGAGCTCAGATTTGGCGGCAAGTCCAGAGGCAAGCTCTGGCCATTCATCAAGAAAAACAAGTCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075326.11 ENSMUST00000113555.8 |
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| CDS CAA 90 bp | TTTGGCTGCTTGGGAGACTTGTTTTTCTTGATGAATGGCCAGAGCTaGCCTCTGGACTTGCCGCCAAATCTGAGCTCAGGCTTGCCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: FGCLGDLFFLMNGQS*PLDLPPNLSSGLPS Trigger: AGAAGGCAAGCCTGAGCTCAGATTTGGCGGCAAGTCCAGAGGCAAGCTCTGGCCATTCATCAAGAAAAACAAGTCTCCCAAGCAGCCAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075326.11 ENSMUST00000113555.8 |
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| CDS CAA 90 bp | ACACCCTTGTTTTTCTTGATGAATGGCCAGAGCTTGCCTCTGGACTaGCCGCCAAATCTGAGCTCAGGCTTGCCTTCTTTGGAGCTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: TPLFFLMNGQSLPLD*PPNLSSGLPSLELE Trigger: TTCCAGCTCCAAAGAAGGCAAGCCTGAGCTCAGATTTGGCGGCAAGTCCAGAGGCAAGCTCTGGCCATTCATCAAGAAAAACAAGGGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000073879.12 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| CDS CAA 90 bp | TCTTCTGGTGTGACACCCTTGTTTTTCTTGATGAATGGCCAGAGCTaGCCTCTGGACTTGCCGCCAAATCTGAGCTCAGGCTTGCCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SSGVTPLFFLMNGQS*PLDLPPNLSSGLPS Trigger: AGAAGGCAAGCCTGAGCTCAGATTTGGCGGCAAGTCCAGAGGCAAGCTCTGGCCATTCATCAAGAAAAACAAGGGTGTCACACCAGAAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000073879.12 ENSMUST00000113562.9 ENSMUST00000113564.9 |
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| CDS CAA 90 bp | CCCAGCTTGAGAGAAAGCTTGTTTTTCTTGATGAATGGCCAGAGCTaGCCTCTGGACTTGCCGCCAAATCTGAGCTCAGGCTTGCCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: PSLRESLFFLMNGQS*PLDLPPNLSSGLPS Trigger: AGAAGGCAAGCCTGAGCTCAGATTTGGCGGCAAGTCCAGAGGCAAGCTCTGGCCATTCATCAAGAAAAACAAGCTTTCTCTCAAGCTGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100207.9 |
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| CDS CAA 90 bp | GTCCAAATGGCCAGTACCTTGTTTTTCTTGATGAATGGCCAGAGCTaGCCTCTGGACTTGCCGCCAAATCTGAGCTCAGGCTTGCCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: VQMASTLFFLMNGQS*PLDLPPNLSSGLPS Trigger: AGAAGGCAAGCCTGAGCTCAGATTTGGCGGCAAGTCCAGAGGCAAGCTCTGGCCATTCATCAAGAAAAACAAGGTACTGGCCATTTGGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113552.9 |
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| CDS TCA 72 bp | GTTGTCGTGCCTTTTCCACATCCGCCTTGGTCACGTTaGTGTCAGCGTCCATTTTCTCGAAGTACTGCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: VVVPFPHPPWSR*CQRPFSRSTAV Trigger: CACAGCAGTACTTCGAGAAAATGGACGCTGACATCAACGTGACCAAGGCGGATGTGGAAAAGGCACGACAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 11 transcripts: ENSMUST00000073879.12 ENSMUST00000075326.11 ENSMUST00000100207.9 ENSMUST00000100208.9 ENSMUST00000113552.9 ENSMUST00000113555.8 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 ENSMUST00000149196.2 |
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| CDS TCA 72 bp | CCAAGGCGTGTGTGGGTTTCCCTAGAGTCCTCTTCATaGGCTCTTTGTGATAACACAGAGACTGAGTCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: PRRVWVSLESSS*ALCDNTETESH Trigger: GTGGGACTCAGTCTCTGTGTTATCACAAAGAGCTCATGAAGAGGACTCTAGGGAAACCCACACACGCCTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128431.3 |
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| CDS GCA 72 bp | TCACGCTCAGCGTCTCTCCTTCAACTACGGAAATGGTaGCTTCGTTCTGACCTTCAAATGTGTAGAGGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SRSASLLQLRKW*LRSDLQMCRGP Trigger: AGGCCCTCTACACATTTGAAGGTCAGAACGAAGGCACCATTTCCGTAGTTGAAGGAGAGACGCTGAGCGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENSMUST00000073879.12 ENSMUST00000075326.11 ENSMUST00000100207.9 ENSMUST00000100208.9 ENSMUST00000113555.8 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 ENSMUST00000128431.3 ENSMUST00000128500.8 |
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| CDS CCA 72 bp | CGTGCTGCCCGGCGTAGTCATTCATCTCATTCAGGGTaGAAAGAAAGGCTTTGCAAGCCGTGTACTTGTACT | + |
|
Preference number: 6 (lower is better) Translates to: RAARRSHSSHSG*KERLCKPCTCT Trigger: AGTACAAGTACACGGCTTGCAAAGCCTTTCTTTCCACCCTGAATGAGATGAATGACTACGCCGGGCAGCACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000073879.12 ENSMUST00000075326.11 ENSMUST00000100207.9 ENSMUST00000100208.9 ENSMUST00000113552.9 ENSMUST00000113555.8 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 ENSMUST00000128500.8 ENSMUST00000136181.8 ENSMUST00000149196.2 |
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| CDS CAA 72 bp | TTGGGAGACTTGTTTTTCTTGATGAATGGCCAGAGCTaGCCTCTGGACTTGCCGCCAAATCTGAGCTCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: LGDLFFLMNGQS*PLDLPPNLSSG Trigger: GCCTGAGCTCAGATTTGGCGGCAAGTCCAGAGGCAAGCTCTGGCCATTCATCAAGAAAAACAAGTCTCCCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075326.11 ENSMUST00000113555.8 |
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| CDS CAA 72 bp | GGTGTGACACCCAGCTTGAGAGAAAGCTTGTTTTTCTaGATGAATGGCCAGAGCTTGCCTCTGGACTTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: GVTPSLRESLFF*MNGQSLPLDLP Trigger: CGGCAAGTCCAGAGGCAAGCTCTGGCCATTCATCAAGAAAAACAAGCTTTCTCTCAAGCTGGGTGTCACACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100207.9 |
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| CDS CAA 72 bp | GGTGTGACACCCTTTTCCACATCCGCCTTGGTCACGTaGATGTCAGCGTCCATTTTCTCGAAGTACTGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: GVTPFSTSALVT*MSASIFSKYCC Trigger: ACAGCAGTACTTCGAGAAAATGGACGCTGACATCAACGTGACCAAGGCGGATGTGGAAAAGGGTGTCACACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128500.8 |
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| CDS CAA 90 bp | GAAAGCTTGTTTTTCTTGATGAATGGCCAGAGCTTGCCTCTGGACTaGCCGCCAAATCTGAGCTCAGGCTTGCCTTCTTTGGAGCTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: ESLFFLMNGQSLPLD*PPNLSSGLPSLELE Trigger: TTCCAGCTCCAAAGAAGGCAAGCCTGAGCTCAGATTTGGCGGCAAGTCCAGAGGCAAGCTCTGGCCATTCATCAAGAAAAACAAGCTTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100207.9 |
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| CDS CAA 90 bp | AGTACCTTGTTTTTCTTGATGAATGGCCAGAGCTTGCCTCTGGACTaGCCGCCAAATCTGAGCTCAGGCTTGCCTTCTTTGGAGCTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: STLFFLMNGQSLPLD*PPNLSSGLPSLELE Trigger: TTCCAGCTCCAAAGAAGGCAAGCCTGAGCTCAGATTTGGCGGCAAGTCCAGAGGCAAGCTCTGGCCATTCATCAAGAAAAACAAGGTACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113552.9 |
||
| CDS TCA 72 bp | GACTCCAGTTGCTTCCAACACGTTTCTATGTGCTGCTaGGCCTTCCGTCCATCATGGAAGTTCGATTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: DSSCFQHVSMCC*AFRPSWKFDFL Trigger: GAGGAAATCGAACTTCCATGATGGACGGAAGGCTCAGCAGCACATAGAAACGTGTTGGAAGCAACTGGAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000073879.12 ENSMUST00000075326.11 ENSMUST00000100207.9 ENSMUST00000100208.9 ENSMUST00000113552.9 ENSMUST00000113555.8 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 ENSMUST00000128500.8 ENSMUST00000149196.2 |
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| CDS CCA 72 bp | CATGAACTCGTTGAAGCGGTGGGAGAGGGGTTCCTTTaGCTGCTTGGGAGACTTGTTTTTCTTGATGAATGG | + |
|
Preference number: 6 (lower is better) Translates to: HELVEAVGEGFL*LLGRLVFLDEW Trigger: CCATTCATCAAGAAAAACAAGTCTCCCAAGCAGCCAAAGGAACCCCTCTCCCACCGCTTCAACGAGTTCATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075326.11 ENSMUST00000113555.8 |
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| CDS CCA 72 bp | CAATCACGCTCAGCGTCTCTCCTTCAACTACGGAAATaGTGCCTTCGTTCTGACCTTCAAATGTGTAGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: QSRSASLLQLRK*CLRSDLQMCRG Trigger: CCCTCTACACATTTGAAGGTCAGAACGAAGGCACCATTTCCGTAGTTGAAGGAGAGACGCTGAGCGTGATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENSMUST00000073879.12 ENSMUST00000075326.11 ENSMUST00000100207.9 ENSMUST00000100208.9 ENSMUST00000113555.8 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 ENSMUST00000128431.3 ENSMUST00000128500.8 |
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| CDS CCA 72 bp | TTGAGAGAAAGCCCACGCTTTAGGCTCCGGAAGCAGTaGATTTTGGGTTTGGAGGTCATGAACTCGTTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LRESPRFRLRKQ*ILGLEVMNSLK Trigger: CTTCAACGAGTTCATGACCTCCAAACCCAAAATCCACTGCTTCCGGAGCCTAAAGCGTGGGCTTTCTCTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113555.8 ENSMUST00000113560.8 |
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| CDS CAA 72 bp | CGGCTTCCTTACAGTCCCGCTCAAACCTCCTCTTACTaGACTCCAGTTGCTTCCAACACGTTTCTATGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: RLPYSPAQTSSY*TPVASNTFLCA Trigger: AGCACATAGAAACGTGTTGGAAGCAACTGGAGTCAAGTAAGAGGAGGTTTGAGCGGGACTGTAAGGAAGCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000073879.12 ENSMUST00000075326.11 ENSMUST00000100207.9 ENSMUST00000100208.9 ENSMUST00000113552.9 ENSMUST00000113555.8 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 ENSMUST00000128500.8 ENSMUST00000149196.2 |
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| CDS CAA 72 bp | TGTTGTCGTGCCTTTTCCACATCCGCCTTGGTCACGTaGATGTCAGCGTCCATTTTCTCGAAGTACTGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: CCRAFSTSALVT*MSASIFSKYCC Trigger: ACAGCAGTACTTCGAGAAAATGGACGCTGACATCAACGTGACCAAGGCGGATGTGGAAAAGGCACGACAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 11 transcripts: ENSMUST00000073879.12 ENSMUST00000075326.11 ENSMUST00000100207.9 ENSMUST00000100208.9 ENSMUST00000113552.9 ENSMUST00000113555.8 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 ENSMUST00000149196.2 |
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| CDS CAA 72 bp | TTTTTCTTGATGAATGGCCAGAGCTTGCCTCTGGACTaGCCGCCAAATCTGAGCTCAGGCTTGCCTTCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: FFLMNGQSLPLD*PPNLSSGLPSL Trigger: CAAAGAAGGCAAGCCTGAGCTCAGATTTGGCGGCAAGTCCAGAGGCAAGCTCTGGCCATTCATCAAGAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 11 transcripts: ENSMUST00000073879.12 ENSMUST00000075326.11 ENSMUST00000100207.9 ENSMUST00000100208.9 ENSMUST00000113552.9 ENSMUST00000113555.8 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 ENSMUST00000128431.3 |
||
| CDS CAA 72 bp | TTGCTGAAGTCTTCTGGTGTGACACCCTTGTTTTTCTaGATGAATGGCCAGAGCTTGCCTCTGGACTTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: LLKSSGVTPLFF*MNGQSLPLDLP Trigger: CGGCAAGTCCAGAGGCAAGCTCTGGCCATTCATCAAGAAAAACAAGGGTGTCACACCAGAAGACTTCAGCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000073879.12 ENSMUST00000113562.9 ENSMUST00000113564.9 |
||
| CDS CAA 72 bp | AAGTCTTCTGGTGTGACACCCTTTTCCACATCCGCCTaGGTCACGTTGATGTCAGCGTCCATTTTCTCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: KSSGVTPFSTSA*VTLMSASIFSK Trigger: CTTCGAGAAAATGGACGCTGACATCAACGTGACCAAGGCGGATGTGGAAAAGGGTGTCACACCAGAAGACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128500.8 |
||
| CDS CAA 90 bp | ATAAGCTTGTTTTTCTTGATGAATGGCCAGAGCTTGCCTCTGGACTaGCCGCCAAATCTGAGCTCAGGCTTGCCTTCTTTGGAGCTGGAA | + |
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Preference number: 6 (lower is better) Translates to: ISLFFLMNGQSLPLD*PPNLSSGLPSLELE Trigger: TTCCAGCTCCAAAGAAGGCAAGCCTGAGCTCAGATTTGGCGGCAAGTCCAGAGGCAAGCTCTGGCCATTCATCAAGAAAAACAAGCTTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100208.9 ENSMUST00000113560.8 |
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| CDS CAA 90 bp | AAGTCTTCTGGTGTGACACCCAGCTTGAGAGAAAGCTTGTTTTTCTaGATGAATGGCCAGAGCTTGCCTCTGGACTTGCCGCCAAATCTG | + |
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Preference number: 6 (lower is better) Translates to: KSSGVTPSLRESLFF*MNGQSLPLDLPPNL Trigger: CAGATTTGGCGGCAAGTCCAGAGGCAAGCTCTGGCCATTCATCAAGAAAAACAAGCTTTCTCTCAAGCTGGGTGTCACACCAGAAGACTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100207.9 |
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| CDS CAA 90 bp | TGCTCAGGTGGGAAGTTGCTGAAGTCTTCTGGTGTGACACCCAGCTaGAGAGAAAGCTTGTTTTTCTTGATGAATGGCCAGAGCTTGCCT | + |
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Preference number: 6 (lower is better) Translates to: CSGGKLLKSSGVTPS*RESLFFLMNGQSLP Trigger: AGGCAAGCTCTGGCCATTCATCAAGAAAAACAAGCTTTCTCTCAAGCTGGGTGTCACACCAGAAGACTTCAGCAACTTCCCACCTGAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100207.9 |
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| CDS CAA 90 bp | AAGTTGCTGAAGTCTTCTGGTGTGACACCCTTTTCCACATCCGCCTaGGTCACGTTGATGTCAGCGTCCATTTTCTCGAAGTACTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: KLLKSSGVTPFSTSA*VTLMSASIFSKYCC Trigger: ACAGCAGTACTTCGAGAAAATGGACGCTGACATCAACGTGACCAAGGCGGATGTGGAAAAGGGTGTCACACCAGAAGACTTCAGCAACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128500.8 |
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| CDS TCA 72 bp | ATCTTCGAATTCAATGTCTCCAGGAGGCTCGAATCCTaGCTTATAGGCTTCTACGACCAGCTGGGAGTCGTT | + |
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Preference number: 6 (lower is better) Translates to: IFEFNVSRRLES*LIGFYDQLGVV Trigger: AACGACTCCCAGCTGGTCGTAGAAGCCTATAAGTCAGGATTCGAGCCTCCTGGAGACATTGAATTCGAAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENSMUST00000073879.12 ENSMUST00000075326.11 ENSMUST00000100207.9 ENSMUST00000100208.9 ENSMUST00000113552.9 ENSMUST00000113555.8 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 ENSMUST00000128431.3 |
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| CDS CCA 72 bp | TGGCGTTTTTGTCTAAATAGACTTCGACGTAGGAAGTaGGGACGTAACCCTCCTCGTCTTCATTTCTGCGGA | + |
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Preference number: 6 (lower is better) Translates to: WRFCLNRLRRRK*GRNPPRLHFCG Trigger: TCCGCAGAAATGAAGACGAGGAGGGTTACGTCCCCACTTCCTACGTCGAAGTCTATTTAGACAAAAACGCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENSMUST00000073879.12 ENSMUST00000075326.11 ENSMUST00000100207.9 ENSMUST00000100208.9 ENSMUST00000113555.8 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 ENSMUST00000128500.8 |
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| CDS CAA 90 bp | CTTCTTTGGAGCTGGAAAGGCTGTTGTCTGACACTGTGCGTTTCATaGGCTGTGTGTAATCTTCGAATTCAATGTCTCCAGGAGGCTCGA | + |
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Preference number: 6 (lower is better) Translates to: LLWSWKGCCLTLCVS*AVCNLRIQCLQEAR Trigger: TCGAGCCTCCTGGAGACATTGAATTCGAAGATTACACACAGCCAATGAAACGCACAGTGTCAGACAACAGCCTTTCCAGCTCCAAAGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENSMUST00000073879.12 ENSMUST00000075326.11 ENSMUST00000100207.9 ENSMUST00000100208.9 ENSMUST00000113552.9 ENSMUST00000113555.8 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 ENSMUST00000128431.3 |
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| CDS CAA 90 bp | GTTAAAAGGGACATAAGCTTGTTTTTCTTGATGAATGGCCAGAGCTaGCCTCTGGACTTGCCGCCAAATCTGAGCTCAGGCTTGCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: VKRDISLFFLMNGQS*PLDLPPNLSSGLPS Trigger: AGAAGGCAAGCCTGAGCTCAGATTTGGCGGCAAGTCCAGAGGCAAGCTCTGGCCATTCATCAAGAAAAACAAGCTTATGTCCCTTTTAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100208.9 ENSMUST00000113560.8 |
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| CDS GCA 72 bp | AGTCATTCATCTCATTCAGGGTGGAAAGAAAGGCTTTaGAAGCCGTGTACTTGTACTCCTCCTCTTCCTTCG | + |
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Preference number: 6 (lower is better) Translates to: SHSSHSGWKERL*KPCTCTPPLPS Trigger: CGAAGGAAGAGGAGGAGTACAAGTACACGGCTTGCAAAGCCTTTCTTTCCACCCTGAATGAGATGAATGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000073879.12 ENSMUST00000075326.11 ENSMUST00000100207.9 ENSMUST00000100208.9 ENSMUST00000113552.9 ENSMUST00000113555.8 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 ENSMUST00000128500.8 ENSMUST00000136181.8 ENSMUST00000149196.2 |
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| CDS CAA 72 bp | AGCTGGAAAGGCTGTTGTCTGACACTGTGCGTTTCATaGGCTGTGTGTAATCTTCGAATTCAATGTCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: SWKGCCLTLCVS*AVCNLRIQCLQ Trigger: CTGGAGACATTGAATTCGAAGATTACACACAGCCAATGAAACGCACAGTGTCAGACAACAGCCTTTCCAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENSMUST00000073879.12 ENSMUST00000075326.11 ENSMUST00000100207.9 ENSMUST00000100208.9 ENSMUST00000113552.9 ENSMUST00000113555.8 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 ENSMUST00000128431.3 |
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| CDS TCA 72 bp | TCTGAGGGTTCTTTAGGTACACATCTTTCATTTTGGTaGTGGCATCTCTCTGGTCCGTCTCCTTCTGTATCT | + |
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Preference number: 6 (lower is better) Translates to: SEGSLGTHLSFW*WHLSGPSPSVS Trigger: AGATACAGAAGGAGACGGACCAGAGAGATGCCATCACCAAAATGAAAGATGTGTACCTAAAGAACCCTCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENSMUST00000073879.12 ENSMUST00000075326.11 ENSMUST00000100207.9 ENSMUST00000100208.9 ENSMUST00000113555.8 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 ENSMUST00000128431.3 ENSMUST00000128500.8 |
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| CDS GCA 72 bp | CTTCTTTGGAGCTGGAAAGGCTGTTGTCTGACACTGTaGGTTTCATTGGCTGTGTGTAATCTTCGAATTCAA | + |
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Preference number: 6 (lower is better) Translates to: LLWSWKGCCLTL*VSLAVCNLRIQ Trigger: TTGAATTCGAAGATTACACACAGCCAATGAAACGCACAGTGTCAGACAACAGCCTTTCCAGCTCCAAAGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENSMUST00000073879.12 ENSMUST00000075326.11 ENSMUST00000100207.9 ENSMUST00000100208.9 ENSMUST00000113552.9 ENSMUST00000113555.8 ENSMUST00000113559.10 ENSMUST00000113560.8 ENSMUST00000113562.9 ENSMUST00000113564.9 ENSMUST00000128431.3 |
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