Pregenerated sensors for FN3KRP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039253Ensembl transcript IDs: ENSMUST00000038096.8
Found 64 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CGTGTGGGAATCCTAACAGTGGGAATGGAGGGTGTCCCTGACTCTTaGCTACTGTGCGACCCGTTCCCGTTCCCGTTCCCTCCTCCTGGG | + |
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Preference number: 1 (lower is better) Translates to: RVGILTVGMEGVPDS*LLCDPFPFPFPPPG Trigger: CCCAGGAGGAGGGAACGGGAACGGGAACGGGTCGCACAGTAGGCAAGAGTCAGGGACACCCTCCATTCCCACTGTTAGGATTCCCACACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| 3UTR GCA 90 bp | ATCCTAACAGTGGGAATGGAGGGTGTCCCTGACTCTTGCCTACTGTaGGACCCGTTCCCGTTCCCGTTCCCTCCTCCTGGGTTGCCTTAT | + |
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Preference number: 1 (lower is better) Translates to: ILTVGMEGVPDSCLL*DPFPFPFPPPGLPY Trigger: ATAAGGCAACCCAGGAGGAGGGAACGGGAACGGGAACGGGTCGCACAGTAGGCAAGAGTCAGGGACACCCTCCATTCCCACTGTTAGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| 3UTR CCA 90 bp | CTCTTGCCTACTGTGCGACCCGTTCCCGTTCCCGTTCCCTCCTCCTaGGTTGCCTTATCCAGCCTGGATGTGATGTTATGTGCCTGGCTT | + |
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Preference number: 1 (lower is better) Translates to: LLPTVRPVPVPVPSS*VALSSLDVMLCAWL Trigger: AAGCCAGGCACATAACATCACATCCAGGCTGGATAAGGCAACCCAGGAGGAGGGAACGGGAACGGGAACGGGTCGCACAGTAGGCAAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| 3UTR GCA 90 bp | TCCCTCCTCCTGGGTTGCCTTATCCAGCCTGGATGTGATGTTATGTaGCTGGCTTATTGTAGCTTGTTATACTGTGCTTGGTTGATGTCC | + |
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Preference number: 1 (lower is better) Translates to: SLLLGCLIQPGCDVM*LAYCSLLYCAWLMS Trigger: GGACATCAACCAAGCACAGTATAACAAGCTACAATAAGCCAGGCACATAACATCACATCCAGGCTGGATAAGGCAACCCAGGAGGAGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| 3UTR GCA 90 bp | CCAAACCAACCTCTAGACTTCTCAGCTTATAGCAGGGTCCAGAAGTaGTACATAAGCAAATGGAACGTTATTGATTTTAGAATTGGTCAT | + |
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Preference number: 1 (lower is better) Translates to: PNQPLDFSAYSRVQK*YISKWNVIDFRIGH Trigger: ATGACCAATTCTAAAATCAATAACGTTCCATTTGCTTATGTAGCACTTCTGGACCCTGCTATAAGCTGAGAAGTCTAGAGGTTGGTTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| 3UTR-3UTR CCA 90 bp | CGGGAGGGAGAGGCAGGTGGATATCCAAGTTCGAGGCCAGCCTGCTCTACAGAGGGGAAGTGGGCACATTaGCCACTTCCCTGCATGGTC | + |
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Preference number: 2 (lower is better) Translates to: REGEAGGYPSSRPACSTEGKWAH*PLPCMV Trigger: GACCATGCAGGGAAGTGGCCAATGTGCCCACTTCCC...CTCTGTAGAGCAGGCTGGCCTCGAACTTGGATATCCACCTGCCTCTCCCTCCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| 3UTR CAA 90 bp | GTCAACACCCTTCACCACACCAACAGTCACTCACAGTTCTCTACCTaGGCAGTGGAGTGTGGCTCACTATACCTAAACTTCAGTAAGTCT | + |
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Preference number: 2 (lower is better) Translates to: VNTLHHTNSHSQFST*AVECGSLYLNFSKS Trigger: AGACTTACTGAAGTTTAGGTATAGTGAGCCACACTCCACTGCCAAGGTAGAGAACTGTGAGTGACTGTTGGTGTGGTGAAGGGTGTTGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| 3UTR-3UTR GCA 90 bp | AGAAAGAAAGAAAGAAAGAAAGCACAAACTTGTATAACGGAGTATTTCCAGGCTGGTGTCCCTGACTCTTaGCTACTGTGCGACCCGTTC | + |
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Preference number: 2 (lower is better) Translates to: RKKERKKAQTCITEYFQAGVPDS*LLCDPF Trigger: GAACGGGTCGCACAGTAGGCAAGAGTCAGGGACACC...AGCCTGGAAATACTCCGTTATACAAGTTTGTGCTTTCTTTCTTTCTTTCTTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| 3UTR-3UTR CCA 90 bp | ACTGTGAATCACTCAGAAATGCTGACAATGCGCAAGGAAGAGATGGGAAGTGGGCTACCATGGAATAAATaGGAAGGATTCATGAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: TVNHSEMLTMRKEEMGSGLPWNK*EGFMRR Trigger: TCTCCTCATGAATCCTTCCCATTTATTCCATGGTAG...CCCACTTCCCATCTCTTCCTTGCGCATTGTCAGCATTTCTGAGTGATTCACAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| 3UTR-3UTR TCA 90 bp | AGAAGTCTAACCATCATAAAACATCACTGTGAATCACTCAGAAATGCTGACAATGAGCCTGTAGGAGTCTaGGCAAGTCCTCTGCATATG | + |
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Preference number: 2 (lower is better) Translates to: RSLTIIKHHCESLRNADNEPVGV*ASPLHM Trigger: CATATGCAGAGGACTTGCTCAGACTCCTACAGGCTC...ATTGTCAGCATTTCTGAGTGATTCACAGTGATGTTTTATGATGGTTAGACTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| 3UTR-3UTR CCA 90 bp | AGAAGTCTAACCATCATAAAACATCACTGTGAATCACTCAGAAATGCTGACAATCACAGTTCTCTACCTTaGCAGTGGAGTGTGGCTCAC | + |
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Preference number: 2 (lower is better) Translates to: RSLTIIKHHCESLRNADNHSSLP*QWSVAH Trigger: GTGAGCCACACTCCACTGCCAAGGTAGAGAACTGTG...ATTGTCAGCATTTCTGAGTGATTCACAGTGATGTTTTATGATGGTTAGACTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| 3UTR-3UTR CAA 90 bp | CGGGAGGGAGAGGCAGGTGGATATCCAAGTTCGAGGCCAGCCTGCTCTACAGAGTGGGAAGTGGGCACATaGGCCACTTCCCTGCATGGT | + |
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Preference number: 3 (lower is better) Translates to: REGEAGGYPSSRPACSTEWEVGT*ATSLHG Trigger: ACCATGCAGGGAAGTGGCCAATGTGCCCACTTCCCA...CTCTGTAGAGCAGGCTGGCCTCGAACTTGGATATCCACCTGCCTCTCCCTCCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| 3UTR CCA 72 bp | ACTGTGCGACCCGTTCCCGTTCCCGTTCCCTCCTCCTaGGTTGCCTTATCCAGCCTGGATGTGATGTTATGT | + |
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Preference number: 3 (lower is better) Translates to: TVRPVPVPVPSS*VALSSLDVMLC Trigger: ACATAACATCACATCCAGGCTGGATAAGGCAACCCAGGAGGAGGGAACGGGAACGGGAACGGGTCGCACAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| 3UTR TCA 72 bp | CCACAGAATCAACTGACCGGTACTGGGGGCTTGCAGTaGTCAGGAGCCTGTAGGAGTCTGAGCAAGTCCTCT | + |
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Preference number: 3 (lower is better) Translates to: PQNQLTGTGGLQ*SGACRSLSKSS Trigger: AGAGGACTTGCTCAGACTCCTACAGGCTCCTGATCACTGCAAGCCCCCAGTACCGGTCAGTTGATTCTGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| 3UTR TCA 72 bp | CTGGGGGCTTGCAGTGATCAGGAGCCTGTAGGAGTCTaGGCAAGTCCTCTGCATATGTTATGGCTGAGTAGC | + |
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Preference number: 3 (lower is better) Translates to: LGACSDQEPVGV*ASPLHMLWLSS Trigger: GCTACTCAGCCATAACATATGCAGAGGACTTGCTCAGACTCCTACAGGCTCCTGATCACTGCAAGCCCCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| 3UTR-3UTR CAA 90 bp | AGAGGCAGGTGGATATCCAAGTTCGAGGCCAGCCTGCTCTACAGAGTGAGTTTCTCCTTGACCAAATCGTaGGAGTCAGGTCACCTGACC | + |
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Preference number: 3 (lower is better) Translates to: RGRWISKFEASLLYRVSFSLTKS*ESGHLT Trigger: GGTCAGGTGACCTGACTCCAACGATTTGGTCAAGGA...GAAACTCACTCTGTAGAGCAGGCTGGCCTCGAACTTGGATATCCACCTGCCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| 3UTR-3UTR CAA 90 bp | AGAGGCAGGTGGATATCCAAGTTCGAGGCCAGCCTGCTCTACAGAGTGAGTTTCTCACAGTTCTCTACCTaGGCAGTGGAGTGTGGCTCA | + |
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Preference number: 3 (lower is better) Translates to: RGRWISKFEASLLYRVSFSQFST*AVECGS Trigger: TGAGCCACACTCCACTGCCAAGGTAGAGAACTGTGA...GAAACTCACTCTGTAGAGCAGGCTGGCCTCGAACTTGGATATCCACCTGCCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| 3UTR CCA 72 bp | AGAAATGCTGACAATGCGCAAGGAAGAGATGGGAAGTaGGCACATTGGCCACTTCCCTGCATGGTCAACACC | + |
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Preference number: 3 (lower is better) Translates to: RNADNAQGRDGK*AHWPLPCMVNT Trigger: GGTGTTGACCATGCAGGGAAGTGGCCAATGTGCCCACTTCCCATCTCTTCCTTGCGCATTGTCAGCATTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| 3UTR-3UTR CAA 90 bp | CGAGACCAAGTTACCCTTAAGGTTGGTAGCTTGGTTGGTCCCCAAACCAACCTCTTATGGCTGAGTAGCTaGGTGTTCGTGTGGGAATCC | + |
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Preference number: 3 (lower is better) Translates to: RDQVTLKVGSLVGPQTNLLWLSS*VFVWES Trigger: GGATTCCCACACGAACACCAAGCTACTCAGCCATAA...GAGGTTGGTTTGGGGACCAACCAAGCTACCAACCTTAAGGGTAACTTGGTCTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| 3UTR-3UTR CAA 90 bp | GATGAGTCCATGTCCAGAAGTCTAACCATCATAAAACATCACTGTGAATCACTCAGAATCATAACCTCCTaGACCAAATCGTTGGAGTCA | + |
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Preference number: 3 (lower is better) Translates to: DESMSRSLTIIKHHCESLRIITS*TKSLES Trigger: TGACTCCAACGATTTGGTCAAGGAGGTTATGATTCT...GAGTGATTCACAGTGATGTTTTATGATGGTTAGACTTCTGGACATGGACTCATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| 3UTR GCA 72 bp | CCTCTAGACTTCTCAGCTTATAGCAGGGTCCAGAAGTaGTACATAAGCAAATGGAACGTTATTGATTTTAGA | + |
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Preference number: 3 (lower is better) Translates to: PLDFSAYSRVQK*YISKWNVIDFR Trigger: TCTAAAATCAATAACGTTCCATTTGCTTATGTAGCACTTCTGGACCCTGCTATAAGCTGAGAAGTCTAGAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| 3UTR CCA 72 bp | GCTTATAGCAGGGTCCAGAAGTGCTACATAAGCAAATaGAACGTTATTGATTTTAGAATTGGTCATTATTCA | + |
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Preference number: 3 (lower is better) Translates to: AYSRVQKCYISK*NVIDFRIGHYS Trigger: TGAATAATGACCAATTCTAAAATCAATAACGTTCCATTTGCTTATGTAGCACTTCTGGACCCTGCTATAAGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| CDS-3UTR GCA 90 bp | CGGGAGGGAGAGGCAGGTGGATATCCAAGTTCGAGGCCAGCCTGCTCTACAGAGCACATACTGCCGCTCTaGCTGTTCACCTCCTTTCCC | + |
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Preference number: 4 (lower is better) Translates to: REGEAGGYPSSRPACSTEHILPL*LFTSFP Trigger: GGGAAAGGAGGTGAACAGGCAGAGCGGCAGTATGTG...CTCTGTAGAGCAGGCTGGCCTCGAACTTGGATATCCACCTGCCTCTCCCTCCCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| CDS-3UTR TCA 90 bp | CGGGAGGGAGAGGCAGGTGGATATCCAAGTTCGAGGCCAGCCTGCTCTACAGAGAGTAAAAGGAGCTACTaGAGCCGCCAAACATGCCCG | + |
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Preference number: 4 (lower is better) Translates to: REGEAGGYPSSRPACSTESKRSY*SRQTCP Trigger: CGGGCATGTTTGGCGGCTTCAGTAGCTCCTTTTACT...CTCTGTAGAGCAGGCTGGCCTCGAACTTGGATATCCACCTGCCTCTCCCTCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| CDS-3UTR CCA 90 bp | TCCCGTTCCCTCCTCCTGGGTTGCCTTATCCAGCCTGGATGTGATGTTATGTGCCCCCAGAGGTCTCCATaGAGTAAGGCGGGCACAATT | + |
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Preference number: 4 (lower is better) Translates to: SRSLLLGCLIQPGCDVMCPQRSP*SKAGTI Trigger: AATTGTGCCCGCCTTACTCCATGGAGACCTCTGGGG...GCACATAACATCACATCCAGGCTGGATAAGGCAACCCAGGAGGAGGGAACGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| CDS-3UTR GCA 90 bp | AGAGGCAGGTGGATATCCAAGTTCGAGGCCAGCCTGCTCTACAGAGTGAGTTTCCCATCTGGGGCTGAATaGGCTGCCTGGCATAGAATT | + |
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Preference number: 4 (lower is better) Translates to: RGRWISKFEASLLYRVSFPSGAE*AAWHRI Trigger: AATTCTATGCCAGGCAGCGCATTCAGCCCCAGATGG...GAAACTCACTCTGTAGAGCAGGCTGGCCTCGAACTTGGATATCCACCTGCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| CDS-3UTR CCA 90 bp | TCCCGTTCCCTCCTCCTGGGTTGCCTTATCCAGCCTGGATGTGATGTTATGTGCGCTGAATGCGCTGCCTaGCATAGAATTCGACCCAAT | + |
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Preference number: 4 (lower is better) Translates to: SRSLLLGCLIQPGCDVMCAECAA*HRIRPN Trigger: ATTGGGTCGAATTCTATGCCAGGCAGCGCATTCAGC...GCACATAACATCACATCCAGGCTGGATAAGGCAACCCAGGAGGAGGGAACGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| CDS-3UTR TCA 90 bp | AGAGGCAGGTGGATATCCAAGTTCGAGGCCAGCCTGCTCTACAGAGTGAGTTTCATGCTGGGTCAAAAATaGTGGGCCCAGAGGAATCTT | + |
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Preference number: 4 (lower is better) Translates to: RGRWISKFEASLLYRVSFMLGQK*WAQRNL Trigger: AAGATTCCTCTGGGCCCATCATTTTTGACCCAGCAT...GAAACTCACTCTGTAGAGCAGGCTGGCCTCGAACTTGGATATCCACCTGCCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| CDS-3UTR CCA 90 bp | CGAGACCAAGTTACCCTTAAGGTTGGTAGCTTGGTTGGTCCCCAAACCAACCTCTGCCAGTCATTTACCTaGGGGAGGTATCCACAGCAT | + |
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Preference number: 4 (lower is better) Translates to: RDQVTLKVGSLVGPQTNLCQSFT*GRYPQH Trigger: ATGCTGTGGATACCTCCCCCAGGTAAATGACTGGCA...GAGGTTGGTTTGGGGACCAACCAAGCTACCAACCTTAAGGGTAACTTGGTCTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| CDS-3UTR CCA 90 bp | AGAGGCAGGTGGATATCCAAGTTCGAGGCCAGCCTGCTCTACAGAGTGAGTTTCTCCATAGAAGGATGCTaGGTCAAAAATGATGGGCCC | + |
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Preference number: 4 (lower is better) Translates to: RGRWISKFEASLLYRVSFSIEGC*VKNDGP Trigger: GGGCCCATCATTTTTGACCCAGCATCCTTCTATGGA...GAAACTCACTCTGTAGAGCAGGCTGGCCTCGAACTTGGATATCCACCTGCCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| CDS-3UTR GCA 90 bp | CGAGACCAAGTTACCCTTAAGGTTGGTAGCTTGGTTGGTCCCCAAACCAACCTCTCAGGAATCTTCAACTaGAGAGCAGACCACAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: RDQVTLKVGSLVGPQTNLSGIFN*RADHSS Trigger: TGAGCTGTGGTCTGCTCTGCAGTTGAAGATTCCTGA...GAGGTTGGTTTGGGGACCAACCAAGCTACCAACCTTAAGGGTAACTTGGTCTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| CDS-3UTR GCA 90 bp | AGAGGCAGGTGGATATCCAAGTTCGAGGCCAGCCTGCTCTACAGAGTGAGTTTCGTGTCCATAGAAGGATaGTGGGTCAAAAATGATGGG | + |
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Preference number: 4 (lower is better) Translates to: RGRWISKFEASLLYRVSFVSIEG*WVKNDG Trigger: CCCATCATTTTTGACCCAGCATCCTTCTATGGACAC...GAAACTCACTCTGTAGAGCAGGCTGGCCTCGAACTTGGATATCCACCTGCCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| CDS-3UTR GCA 90 bp | ACTGTGAATCACTCAGAAATGCTGACAATGCGCAAGGAAGAGATGGGAAGTGGGTCGACCCAATTCTTCTaGCAGTCATTTACCTGGGGG | + |
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Preference number: 4 (lower is better) Translates to: TVNHSEMLTMRKEEMGSGSTQFF*QSFTWG Trigger: CCCCCAGGTAAATGACTGGCAGAAGAATTGGGTCGA...CCCACTTCCCATCTCTTCCTTGCGCATTGTCAGCATTTCTGAGTGATTCACAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| 3UTR CAA 72 bp | CTTCACCACACCAACAGTCACTCACAGTTCTCTACCTaGGCAGTGGAGTGTGGCTCACTATACCTAAACTTC | + |
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Preference number: 4 (lower is better) Translates to: LHHTNSHSQFST*AVECGSLYLNF Trigger: GAAGTTTAGGTATAGTGAGCCACACTCCACTGCCAAGGTAGAGAACTGTGAGTGACTGTTGGTGTGGTGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| CDS-3UTR GCA 90 bp | GATGAGTCCATGTCCAGAAGTCTAACCATCATAAAACATCACTGTGAATCACTCCTCCTTTCCCCACAGTaGCAGCCTCCTTTAGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: DESMSRSLTIIKHHCESLLLSPQ*QPPLAA Trigger: GGCTGCTAAAGGAGGCTGGCACTGTGGGGAAAGGAG...GAGTGATTCACAGTGATGTTTTATGATGGTTAGACTTCTGGACATGGACTCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| CDS-3UTR TCA 90 bp | GATGAGTCCATGTCCAGAAGTCTAACCATCATAAAACATCACTGTGAATCACTCCCAAGCTTGGTGGCATaGCTGCTCAGATACCGCATG | + |
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Preference number: 4 (lower is better) Translates to: DESMSRSLTIIKHHCESLPSLVA*LLRYRM Trigger: CATGCGGTATCTGAGCAGTCATGCCACCAAGCTTGG...GAGTGATTCACAGTGATGTTTTATGATGGTTAGACTTCTGGACATGGACTCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| CDS-3UTR CCA 90 bp | GTCCTACCATGGAATAAATGGGAAGGATTCATGAGGAGAGTGACTATGAAGAATGCTGGGTCCCAAGCTTaGTGGCATGACTGCTCAGAT | + |
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Preference number: 4 (lower is better) Translates to: VLPWNKWEGFMRRVTMKNAGSQA*WHDCSD Trigger: ATCTGAGCAGTCATGCCACCAAGCTTGGGACCCAGC...ATTCTTCATAGTCACTCTCCTCATGAATCCTTCCCATTTATTCCATGGTAGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| CDS-3UTR GCA 90 bp | AAAGAAAGAAAGAAAGCACAAACTTGTATAACGGAGTATTTCCAGGCTCCTAAAGCTCCATCACGAGCATaGTCCCACCTCCTGGGGCAT | + |
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Preference number: 4 (lower is better) Translates to: KERKKAQTCITEYFQAPKAPSRA*SHLLGH Trigger: ATGCCCCAGGAGGTGGGAGCATGCTCGTGATGGAGC...TTTAGGAGCCTGGAAATACTCCGTTATACAAGTTTGTGCTTTCTTTCTTTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| CDS-3UTR CCA 90 bp | AAGAAACAAGGGATCTTAAGCAAGTCCTACCATGGAATAAATGGGAAGGATTCAGGGTCCCAAGCTTGGTaGCATGACTGCTCAGATACC | + |
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Preference number: 4 (lower is better) Translates to: KKQGILSKSYHGINGKDSGSQAW*HDCSDT Trigger: GGTATCTGAGCAGTCATGCCACCAAGCTTGGGACCC...TGAATCCTTCCCATTTATTCCATGGTAGGACTTGCTTAAGATCCCTTGTTTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| CDS-3UTR CCA 90 bp | AAAGAAAGAAAGAAAGCACAAACTTGTATAACGGAGTATTTCCAGGCTCCTAAACATGCTCCCACCTCCTaGGGCATCGACAACCTTGAT | + |
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Preference number: 4 (lower is better) Translates to: KERKKAQTCITEYFQAPKHAPTS*GIDNLD Trigger: ATCAAGGTTGTCGATGCCCCAGGAGGTGGGAGCATG...TTTAGGAGCCTGGAAATACTCCGTTATACAAGTTTGTGCTTTCTTTCTTTCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| CDS-3UTR GCA 90 bp | AGAAGTCTAACCATCATAAAACATCACTGTGAATCACTCAGAAATGCTGACAATCCCAGAGGAATCTTCTaGTACATTCCCTCCCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: RSLTIIKHHCESLRNADNPRGIF*YIPSPE Trigger: CTCTGGGGAGGGAATGTAGCAGAAGATTCCTCTGGG...ATTGTCAGCATTTCTGAGTGATTCACAGTGATGTTTTATGATGGTTAGACTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| CDS-3UTR CCA 90 bp | AGAAGTCTAACCATCATAAAACATCACTGTGAATCACTCAGAAATGCTGACAATTGTAGATCTGCAAGCTaGGTCCCAAGCTTGGTGGCA | + |
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Preference number: 4 (lower is better) Translates to: RSLTIIKHHCESLRNADNCRSAS*VPSLVA Trigger: TGCCACCAAGCTTGGGACCCAGCTTGCAGATCTACA...ATTGTCAGCATTTCTGAGTGATTCACAGTGATGTTTTATGATGGTTAGACTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| CDS GCA 90 bp | GGTCCACATACTGCCGCTCTGCCTGTTCACCTCCTTTCCCCACAGTaGCAGCCTCCTTTAGCAGCCTCTCTCCAAGCCTCTTGTTCTCAA | + |
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Preference number: 5 (lower is better) Translates to: GPHTAALPVHLLSPQ*QPPLAASLQASCSQ Trigger: TTGAGAACAAGAGGCTTGGAGAGAGGCTGCTAAAGGAGGCTGGCACTGTGGGGAAAGGAGGTGAACAGGCAGAGCGGCAGTATGTGGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| CDS CCA 90 bp | GGCCCAGAGGAATCTTCTGCTACATTCCCTCCCCAGAGGTCTCCATaGAGTAAGGCGGGCACAATTTCCAGATCACGGAACAGGTCAGGA | + |
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Preference number: 5 (lower is better) Translates to: GPEESSATFPPQRSP*SKAGTISRSRNRSG Trigger: TCCTGACCTGTTCCGTGATCTGGAAATTGTGCCCGCCTTACTCCATGGAGACCTCTGGGGAGGGAATGTAGCAGAAGATTCCTCTGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| CDS-3UTR CAA 90 bp | CGGGAGGGAGAGGCAGGTGGATATCCAAGTTCGAGGCCAGCCTGCTCTACAGAGCTCTCTCCAAGCCTCTaGTTCTCAAGGTGTAGATCT | + |
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Preference number: 5 (lower is better) Translates to: REGEAGGYPSSRPACSTELSPSL*FSRCRS Trigger: AGATCTACACCTTGAGAACAAGAGGCTTGGAGAGAG...CTCTGTAGAGCAGGCTGGCCTCGAACTTGGATATCCACCTGCCTCTCCCTCCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| CDS GCA 90 bp | CAAGGTGTAGATCTGCAAGCTGGGTCCCAAGCTTGGTGGCATGACTaGTCAGATACCGCATGTCCAAATGCTCCATCACGAGCATGCTCC | + |
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Preference number: 5 (lower is better) Translates to: QGVDLQAGSQAWWHD*SDTACPNAPSRACS Trigger: GGAGCATGCTCGTGATGGAGCATTTGGACATGCGGTATCTGAGCAGTCATGCCACCAAGCTTGGGACCCAGCTTGCAGATCTACACCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| CDS CCA 90 bp | TCTTGTTCTCAAGGTGTAGATCTGCAAGCTGGGTCCCAAGCTTGGTaGCATGACTGCTCAGATACCGCATGTCCAAATGCTCCATCACGA | + |
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Preference number: 5 (lower is better) Translates to: SCSQGVDLQAGSQAW*HDCSDTACPNAPSR Trigger: TCGTGATGGAGCATTTGGACATGCGGTATCTGAGCAGTCATGCCACCAAGCTTGGGACCCAGCTTGCAGATCTACACCTTGAGAACAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| CDS-3UTR CAA 90 bp | AGAGGCAGGTGGATATCCAAGTTCGAGGCCAGCCTGCTCTACAGAGTGAGTTTCCTTCTAGCCTCTGCCTaGGAGTTCACTTTCACAAAC | + |
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Preference number: 5 (lower is better) Translates to: RGRWISKFEASLLYRVSFLLASA*EFTFTN Trigger: GTTTGTGAAAGTGAACTCCAAGGCAGAGGCTAGAAG...GAAACTCACTCTGTAGAGCAGGCTGGCCTCGAACTTGGATATCCACCTGCCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| CDS-3UTR CAA 90 bp | CGAGACCAAGTTACCCTTAAGGTTGGTAGCTTGGTTGGTCCCCAAACCAACCTCCAAACATGCCCGCTATaGCCAGCTCATATTCTGAGT | + |
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Preference number: 5 (lower is better) Translates to: RDQVTLKVGSLVGPQTNLQTCPL*PAHILS Trigger: ACTCAGAATATGAGCTGGCAATAGCGGGCATGTTTG...GAGGTTGGTTTGGGGACCAACCAAGCTACCAACCTTAAGGGTAACTTGGTCTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| CDS-3UTR CAA 90 bp | AAGAAACAAGGGATCTTAAGCAAGTCCTACCATGGAATAAATGGGAAGGATTCAGAATGGCAGTTAAGCTaGCCATCTCACCCTCAAACA | + |
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Preference number: 5 (lower is better) Translates to: KKQGILSKSYHGINGKDSEWQLS*PSHPQT Trigger: TGTTTGAGGGTGAGATGGCAAGCTTAACTGCCATTC...TGAATCCTTCCCATTTATTCCATGGTAGGACTTGCTTAAGATCCCTTGTTTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| CDS CAA 72 bp | ACGAGCATGCTCCCACCTCCTGGGGCATCGACAACCTaGATGGGCTTAGGTACCTTGACTGTACCCGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: TSMLPPPGASTT*MGLGTLTVPVF Trigger: GAAGACGGGTACAGTCAAGGTACCTAAGCCCATCAAGGTTGTCGATGCCCCAGGAGGTGGGAGCATGCTCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| CDS CAA 90 bp | TGCTCCATCACGAGCATGCTCCCACCTCCTGGGGCATCGACAACCTaGATGGGCTTAGGTACCTTGACTGTACCCGTCTTCAGAATGGCA | + |
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Preference number: 6 (lower is better) Translates to: CSITSMLPPPGASTT*MGLGTLTVPVFRMA Trigger: TGCCATTCTGAAGACGGGTACAGTCAAGGTACCTAAGCCCATCAAGGTTGTCGATGCCCCAGGAGGTGGGAGCATGCTCGTGATGGAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| CDS CAA 90 bp | TTCCCCACAGTGCCAGCCTCCTTTAGCAGCCTCTCTCCAAGCCTCTaGTTCTCAAGGTGTAGATCTGCAAGCTGGGTCCCAAGCTTGGTG | + |
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Preference number: 6 (lower is better) Translates to: FPTVPASFSSLSPSL*FSRCRSASWVPSLV Trigger: CACCAAGCTTGGGACCCAGCTTGCAGATCTACACCTTGAGAACAAGAGGCTTGGAGAGAGGCTGCTAAAGGAGGCTGGCACTGTGGGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| CDS GCA 72 bp | TACATCAAACCCAAACTGGTCCACATACTGCCGCTCTaGCTGTTCACCTCCTTTCCCCACAGTGCCAGCCTC | + |
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Preference number: 6 (lower is better) Translates to: YIKPKLVHILPL*LFTSFPHSASL Trigger: GAGGCTGGCACTGTGGGGAAAGGAGGTGAACAGGCAGAGCGGCAGTATGTGGACCAGTTTGGGTTTGATGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| CDS CAA 72 bp | GTGCCAGCCTCCTTTAGCAGCCTCTCTCCAAGCCTCTaGTTCTCAAGGTGTAGATCTGCAAGCTGGGTCCCA | + |
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Preference number: 6 (lower is better) Translates to: VPASFSSLSPSL*FSRCRSASWVP Trigger: TGGGACCCAGCTTGCAGATCTACACCTTGAGAACAAGAGGCTTGGAGAGAGGCTGCTAAAGGAGGCTGGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| CDS GCA 72 bp | GATCTGCAAGCTGGGTCCCAAGCTTGGTGGCATGACTaGTCAGATACCGCATGTCCAAATGCTCCATCACGA | + |
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Preference number: 6 (lower is better) Translates to: DLQAGSQAWWHD*SDTACPNAPSR Trigger: TCGTGATGGAGCATTTGGACATGCGGTATCTGAGCAGTCATGCCACCAAGCTTGGGACCCAGCTTGCAGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| CDS CAA 90 bp | CTCCCACCTCCTGGGGCATCGACAACCTTGATGGGCTTAGGTACCTaGACTGTACCCGTCTTCAGAATGGCAGTTAAGCTTGCCATCTCA | + |
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Preference number: 6 (lower is better) Translates to: LPPPGASTTLMGLGT*TVPVFRMAVKLAIS Trigger: TGAGATGGCAAGCTTAACTGCCATTCTGAAGACGGGTACAGTCAAGGTACCTAAGCCCATCAAGGTTGTCGATGCCCCAGGAGGTGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| CDS TCA 72 bp | TGTAGATCTGCAAGCTGGGTCCCAAGCTTGGTGGCATaGCTGCTCAGATACCGCATGTCCAAATGCTCCATC | + |
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Preference number: 6 (lower is better) Translates to: CRSASWVPSLVA*LLRYRMSKCSI Trigger: GATGGAGCATTTGGACATGCGGTATCTGAGCAGTCATGCCACCAAGCTTGGGACCCAGCTTGCAGATCTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| CDS GCA 72 bp | CATGTCACTACATCAAACCCAAACTGGTCCACATACTaGCGCTCTGCCTGTTCACCTCCTTTCCCCACAGTG | + |
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Preference number: 6 (lower is better) Translates to: HVTTSNPNWSTY*RSACSPPFPTV Trigger: CACTGTGGGGAAAGGAGGTGAACAGGCAGAGCGGCAGTATGTGGACCAGTTTGGGTTTGATGTAGTGACATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| CDS CCA 72 bp | CAAGGTGTAGATCTGCAAGCTGGGTCCCAAGCTTGGTaGCATGACTGCTCAGATACCGCATGTCCAAATGCT | + |
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Preference number: 6 (lower is better) Translates to: QGVDLQAGSQAW*HDCSDTACPNA Trigger: AGCATTTGGACATGCGGTATCTGAGCAGTCATGCCACCAAGCTTGGGACCCAGCTTGCAGATCTACACCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| CDS CCA 72 bp | TCTCCACCATGTCCATCTGGGGCTGAATGCGCTGCCTaGCATAGAATTCGACCCAATTCTTCTGCCAGTCAT | + |
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Preference number: 6 (lower is better) Translates to: SPPCPSGAECAA*HRIRPNSSASH Trigger: ATGACTGGCAGAAGAATTGGGTCGAATTCTATGCCAGGCAGCGCATTCAGCCCCAGATGGACATGGTGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| CDS CCA 72 bp | GAATCTTCTGCTACATTCCCTCCCCAGAGGTCTCCATaGAGTAAGGCGGGCACAATTTCCAGATCACGGAAC | + |
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Preference number: 6 (lower is better) Translates to: ESSATFPPQRSP*SKAGTISRSRN Trigger: GTTCCGTGATCTGGAAATTGTGCCCGCCTTACTCCATGGAGACCTCTGGGGAGGGAATGTAGCAGAAGATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| CDS CCA 72 bp | TCTCAAGGTGTAGATCTGCAAGCTGGGTCCCAAGCTTaGTGGCATGACTGCTCAGATACCGCATGTCCAAAT | + |
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Preference number: 6 (lower is better) Translates to: SQGVDLQAGSQA*WHDCSDTACPN Trigger: ATTTGGACATGCGGTATCTGAGCAGTCATGCCACCAAGCTTGGGACCCAGCTTGCAGATCTACACCTTGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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| CDS CAA 72 bp | CCTGGGGCATCGACAACCTTGATGGGCTTAGGTACCTaGACTGTACCCGTCTTCAGAATGGCAGTTAAGCTT | + |
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Preference number: 6 (lower is better) Translates to: PGASTTLMGLGT*TVPVFRMAVKL Trigger: AAGCTTAACTGCCATTCTGAAGACGGGTACAGTCAAGGTACCTAAGCCCATCAAGGTTGTCGATGCCCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038096.8 |
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