Pregenerated sensors for FN3K (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025175Ensembl transcript IDs: ENSMUST00000026175.9, ENSMUST00000092302.11, ENSMUST00000103014.4
Found 137 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCAGGGTTTACTCCCTGGTTCTAGGCACACCACAAGAGACCCTTTaGCCCAGTCTGGCAAGCCCTCAAGCACGGAGGTCCACCATCTGC | + |
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Preference number: 1 (lower is better) Translates to: PRVYSLVLGTPQETL*PSLASPQARRSTIC Trigger: GCAGATGGTGGACCTCCGTGCTTGAGGGCTTGCCAGACTGGGGCAAAGGGTCTCTTGTGGTGTGCCTAGAACCAGGGAGTAAACCCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092302.11 ENSMUST00000103014.4 |
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| 3UTR CCA 90 bp | GGTTCTCTCCCACATCGTGGCCTTTGCATCCCTCTTGTGCCCACCTaGAATGCTGACCAGCTGACTGAAGTGTTTACTCCCACCAAGCCT | + |
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Preference number: 1 (lower is better) Translates to: GSLPHRGLCIPLVPT*NADQLTEVFTPTKP Trigger: AGGCTTGGTGGGAGTAAACACTTCAGTCAGCTGGTCAGCATTCCAGGTGGGCACAAGAGGGATGCAAAGGCCACGATGTGGGAGAGAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
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| 3UTR TCA 90 bp | GTGGCCTTTGCATCCCTCTTGTGCCCACCTGGAATGCTGACCAGCTaGCTGAAGTGTTTACTCCCACCAAGCCTTCCCATCAGCTTTCTG | + |
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Preference number: 1 (lower is better) Translates to: VAFASLLCPPGMLTS*LKCLLPPSLPISFL Trigger: CAGAAAGCTGATGGGAAGGCTTGGTGGGAGTAAACACTTCAGTCAGCTGGTCAGCATTCCAGGTGGGCACAAGAGGGATGCAAAGGCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
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| 3UTR CCA 90 bp | GCTGTCAATAAGACAGCCCTGGAAGAGAACCTGCATGATAAGGGCTaGACCCTGAGCTTTGTCCACTTTACCCTCTTCAGATTCTTAAAC | + |
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Preference number: 1 (lower is better) Translates to: AVNKTALEENLHDKG*TLSFVHFTLFRFLN Trigger: GTTTAAGAATCTGAAGAGGGTAAAGTGGACAAAGCTCAGGGTCCAGCCCTTATCATGCAGGTTCTCTTCCAGGGCTGTCTTATTGACAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
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| 3UTR CCA 90 bp | GTCAGCCCAGCTAGGGACGAGGATGCTACATGGCTTGGGAATGGTTaGAGGCACTACATAAAGAACAATTTTGTTGTCACTCAACATAGA | + |
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Preference number: 1 (lower is better) Translates to: VSPARDEDATWLGNG*RHYIKNNFVVTQHR Trigger: TCTATGTTGAGTGACAACAAAATTGTTCTTTATGTAGTGCCTCCAACCATTCCCAAGCCATGTAGCATCCTCGTCCCTAGCTGGGCTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
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| 3UTR CCA 90 bp | ACAGAAGCTAGGTGGGAACAACACAGACATCCATCAACAGATGAATaGATAAACAGAGACCACGGTTTGTCTATACAGTGTAATGGGCTT | + |
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Preference number: 1 (lower is better) Translates to: TEARWEQHRHPSTDE*INRDHGLSIQCNGL Trigger: AAGCCCATTACACTGTATAGACAAACCGTGGTCTCTGTTTATCCATTCATCTGTTGATGGATGTCTGTGTTGTTCCCACCTAGCTTCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092302.11 ENSMUST00000103014.4 |
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| 3UTR TCA 90 bp | AGGAAGGTTGCAAATTCCAGTCCAAAATCTGGTCCACCCATACAGTaGAATATTACTCTACCACAAAGAAAGTGTTCTTACACATGCCAC | + |
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Preference number: 1 (lower is better) Translates to: RKVANSSPKSGPPIQ*NITLPQRKCSYTCH Trigger: GTGGCATGTGTAAGAACACTTTCTTTGTGGTAGAGTAATATTTCACTGTATGGGTGGACCAGATTTTGGACTGGAATTTGCAACCTTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
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| 3UTR GCA 90 bp | ATAAAGAATGGAGATTGGAAACTTGGCTCAACAAATAATGGTACTTaGTGTTCTCCCAAAAGCCCAGAGTTTGGTTCACAGCATCCACAT | + |
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Preference number: 1 (lower is better) Translates to: IKNGDWKLGSTNNGT*CSPKSPEFGSQHPH Trigger: ATGTGGATGCTGTGAACCAAACTCTGGGCTTTTGGGAGAACAGCAAGTACCATTATTTGTTGAGCCAAGTTTCCAATCTCCATTCTTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
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| 3UTR GCA 90 bp | TTCAGACCTATAATAACAACACTTGAGAGACTGTATCAGGAAGGTTaGAAATTCCAGTCCAAAATCTGGTCCACCCATACAGTGAAATAT | + |
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Preference number: 1 (lower is better) Translates to: FRPIITTLERLYQEG*KFQSKIWSTHTVKY Trigger: ATATTTCACTGTATGGGTGGACCAGATTTTGGACTGGAATTTGCAACCTTCCTGATACAGTCTCTCAAGTGTTGTTATTATAGGTCTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
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| 3UTR-3UTR GCA 90 bp | AGGGACAGGGAAGGGTTACGGGAAGGGGCTGTGAAAGACACGAGGAAGGGTCTGCCACAAGAGACCCTTTaGCCCAGTCTGGCAAGCCCT | + |
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Preference number: 2 (lower is better) Translates to: RDREGLREGAVKDTRKGLPQETL*PSLASP Trigger: AGGGCTTGCCAGACTGGGGCAAAGGGTCTCTTGTGG...CAGACCCTTCCTCGTGTCTTTCACAGCCCCTTCCCGTAACCCTTCCCTGTCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092302.11 ENSMUST00000103014.4 |
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| 3UTR-3UTR GCA 90 bp | AGGGACAGGGAAGGGTTACGGGAAGGGGCTGTGAAAGACACGAGGAAGGGTCTGTGGGGGCCCTCCTCTTaGCAAAAGATGACAAGGTCA | + |
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Preference number: 2 (lower is better) Translates to: RDREGLREGAVKDTRKGLWGPSS*QKMTRS Trigger: TGACCTTGTCATCTTTTGGCAAGAGGAGGGCCCCCA...CAGACCCTTCCTCGTGTCTTTCACAGCCCCTTCCCGTAACCCTTCCCTGTCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000092302.11 ENSMUST00000103014.4 |
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| 3UTR-3UTR GCA 90 bp | AGGGCCCAGTCAGCCCAGCTAGGGACGAGGATGCTACATGGCTTGGGAATGGTTTGGGGGCCCTCCTCTTaGCAAAAGATGACAAGGTCA | + |
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Preference number: 2 (lower is better) Translates to: RAQSAQLGTRMLHGLGMVWGPSS*QKMTRS Trigger: TGACCTTGTCATCTTTTGGCAAGAGGAGGGCCCCCA...AACCATTCCCAAGCCATGTAGCATCCTCGTCCCTAGCTGGGCTGACTGGGCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
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| 3UTR-3UTR GCA 90 bp | CCATTCTCCTTCTGGAGTCCTTCTTGGTGCTGCTTAGCCCAGGGTTTACTCCCTGCAAGCTCTCAGTGTTaGCACTTAGGTGGAAGGGCC | + |
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Preference number: 2 (lower is better) Translates to: PFSFWSPSWCCLAQGLLPASSQC*HLGGRA Trigger: GGCCCTTCCACCTAAGTGGCAACACTGAGAGCTTGC...AGGGAGTAAACCCTGGGCTAAGCAGCACCAAGAAGGACTCCAGAAGGAGAATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092302.11 ENSMUST00000103014.4 |
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| 3UTR-3UTR CCA 90 bp | CAGGGACAGGGAAGGGTTACGGGAAGGGGCTGTGAAAGACACGAGGAAGGGTCTAGCATCCACATCCCGTaGTTCACAACTACCTGTAAC | + |
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Preference number: 2 (lower is better) Translates to: QGQGRVTGRGCERHEEGSSIHIP*FTTTCN Trigger: GTTACAGGTAGTTGTGAACCACGGGATGTGGATGCT...AGACCCTTCCTCGTGTCTTTCACAGCCCCTTCCCGTAACCCTTCCCTGTCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
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| 3UTR-3UTR TCA 90 bp | GCTAGCATTGGCAAGCTCTCAGTGTTGCCACTTAGGTGGAAGGGCCATGATTCCCCTGAGCATGAAGACTaGGAAGGGCAGCACTGTGTA | + |
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Preference number: 2 (lower is better) Translates to: ASIGKLSVLPLRWKGHDSPEHED*EGQHCV Trigger: TACACAGTGCTGCCCTTCTCAGTCTTCATGCTCAGG...GGAATCATGGCCCTTCCACCTAAGTGGCAACACTGAGAGCTTGCCAATGCTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092302.11 ENSMUST00000103014.4 |
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| 3UTR-3UTR TCA 90 bp | CCATTCTCCTTCTGGAGTCCTTCTTGGTGCTGCTTAGCCCAGGGTTTACTCCCTCCTGAGCATGAAGACTaGGAAGGGCAGCACTGTGTA | + |
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Preference number: 2 (lower is better) Translates to: PFSFWSPSWCCLAQGLLPPEHED*EGQHCV Trigger: TACACAGTGCTGCCCTTCTCAGTCTTCATGCTCAGG...AGGGAGTAAACCCTGGGCTAAGCAGCACCAAGAAGGACTCCAGAAGGAGAATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092302.11 ENSMUST00000103014.4 |
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| 3UTR-3UTR TCA 90 bp | CTGGGAACCGAAGTCAGGTTCTCTGCAAGAGCAGTACCTGCTGTTAGTCACCTCGAAGTCCCACCACCATaGGAGGCCCTTAAACTCAAC | + |
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Preference number: 2 (lower is better) Translates to: LGTEVRFSARAVPAVSHLEVPPP*EALKLN Trigger: GTTGAGTTTAAGGGCCTCTCATGGTGGTGGGACTTC...GAGGTGACTAACAGCAGGTACTGCTCTTGCAGAGAACCTGACTTCGGTTCCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
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| 3UTR-3UTR CCA 90 bp | AGGGACAGGGAAGGGTTACGGGAAGGGGCTGTGAAAGACACGAGGAAGGGTCTGTGTTCCTCCATTCACTaGCTGCAAAATCTCTGGGAA | + |
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Preference number: 2 (lower is better) Translates to: RDREGLREGAVKDTRKGLCSSIH*LQNLWE Trigger: TTCCCAGAGATTTTGCAGCCAGTGAATGGAGGAACA...CAGACCCTTCCTCGTGTCTTTCACAGCCCCTTCCCGTAACCCTTCCCTGTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092302.11 ENSMUST00000103014.4 |
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| 3UTR-3UTR CCA 90 bp | CAGGGACAGGGAAGGGTTACGGGAAGGGGCTGTGAAAGACACGAGGAAGGGTCTTGTTCCTCCATTCACTaGCTGCAAAATCTCTGGGAA | + |
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Preference number: 2 (lower is better) Translates to: QGQGRVTGRGCERHEEGSCSSIH*LQNLWE Trigger: TTCCCAGAGATTTTGCAGCCAGTGAATGGAGGAACA...AGACCCTTCCTCGTGTCTTTCACAGCCCCTTCCCGTAACCCTTCCCTGTCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092302.11 ENSMUST00000103014.4 |
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| 3UTR-3UTR TCA 90 bp | CCATTCTCCTTCTGGAGTCCTTCTTGGTGCTGCTTAGCCCAGGGTTTACTCCCTGACCCTCCATCTCTCTaGGCAGCTCCATTCTTATCT | + |
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Preference number: 2 (lower is better) Translates to: PFSFWSPSWCCLAQGLLPDPPSL*AAPFLS Trigger: AGATAAGAATGGAGCTGCTCAGAGAGATGGAGGGTC...AGGGAGTAAACCCTGGGCTAAGCAGCACCAAGAAGGACTCCAGAAGGAGAATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
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| 3UTR-3UTR GCA 90 bp | GCTAGCATTGGCAAGCTCTCAGTGTTGCCACTTAGGTGGAAGGGCCATGATTCCGCTACTAAAGGCAGGTaGCACCTGAGCATGAAGACT | + |
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Preference number: 2 (lower is better) Translates to: ASIGKLSVLPLRWKGHDSATKGR*HLSMKT Trigger: AGTCTTCATGCTCAGGTGGCACCTGCCTTTAGTAGC...GGAATCATGGCCCTTCCACCTAAGTGGCAACACTGAGAGCTTGCCAATGCTAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092302.11 ENSMUST00000103014.4 |
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| 3UTR-3UTR GCA 90 bp | CTGGGAACCGAAGTCAGGTTCTCTGCAAGAGCAGTACCTGCTGTTAGTCACCTCCTCACCTCCAACTCATaGCAGGAAGAGCATGGCTAT | + |
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Preference number: 2 (lower is better) Translates to: LGTEVRFSARAVPAVSHLLTSNS*QEEHGY Trigger: ATAGCCATGCTCTTCCTGGCATGAGTTGGAGGTGAG...GAGGTGACTAACAGCAGGTACTGCTCTTGCAGAGAACCTGACTTCGGTTCCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
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| 3UTR-3UTR CCA 90 bp | CTGGGAACCGAAGTCAGGTTCTCTGCAAGAGCAGTACCTGCTGTTAGTCACCTCTTCTCTCCCACATCGTaGCCTTTGCATCCCTCTTGT | + |
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Preference number: 2 (lower is better) Translates to: LGTEVRFSARAVPAVSHLFSPTS*PLHPSC Trigger: ACAAGAGGGATGCAAAGGCCACGATGTGGGAGAGAA...GAGGTGACTAACAGCAGGTACTGCTCTTGCAGAGAACCTGACTTCGGTTCCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
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| 3UTR-3UTR CCA 90 bp | CAGGGACAGGGAAGGGTTACGGGAAGGGGCTGTGAAAGACACGAGGAAGGGTCTTCAATAAGACAGCCCTaGAAGAGAACCTGCATGATA | + |
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Preference number: 2 (lower is better) Translates to: QGQGRVTGRGCERHEEGSSIRQP*KRTCMI Trigger: TATCATGCAGGTTCTCTTCCAGGGCTGTCTTATTGA...AGACCCTTCCTCGTGTCTTTCACAGCCCCTTCCCGTAACCCTTCCCTGTCCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
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| 3UTR-3UTR CCA 90 bp | CCATTCTCCTTCTGGAGTCCTTCTTGGTGCTGCTTAGCCCAGGGTTTACTCCCTGGATGCTACATGGCTTaGGAATGGTTGGAGGCACTA | + |
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Preference number: 2 (lower is better) Translates to: PFSFWSPSWCCLAQGLLPGCYMA*EWLEAL Trigger: TAGTGCCTCCAACCATTCCCAAGCCATGTAGCATCC...AGGGAGTAAACCCTGGGCTAAGCAGCACCAAGAAGGACTCCAGAAGGAGAATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
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| 3UTR-3UTR GCA 90 bp | GCTAGCATTGGCAAGCTCTCAGTGTTGCCACTTAGGTGGAAGGGCCATGATTCCCCTCCATTCACTGGCTaGAAAATCTCTGGGAATGTT | + |
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Preference number: 2 (lower is better) Translates to: ASIGKLSVLPLRWKGHDSPPFTG*KISGNV Trigger: AACATTCCCAGAGATTTTGCAGCCAGTGAATGGAGG...GGAATCATGGCCCTTCCACCTAAGTGGCAACACTGAGAGCTTGCCAATGCTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092302.11 ENSMUST00000103014.4 |
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| 3UTR-3UTR GCA 90 bp | CCATTCTCCTTCTGGAGTCCTTCTTGGTGCTGCTTAGCCCAGGGTTTACTCCCTGTGCTCATTCTCACCTaGAGTGAGAAATTTTGTGGC | + |
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Preference number: 2 (lower is better) Translates to: PFSFWSPSWCCLAQGLLPVLILT*SEKFCG Trigger: GCCACAAAATTTCTCACTGCAGGTGAGAATGAGCAC...AGGGAGTAAACCCTGGGCTAAGCAGCACCAAGAAGGACTCCAGAAGGAGAATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092302.11 ENSMUST00000103014.4 |
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| 3UTR-3UTR GCA 90 bp | CAGGGACAGGGAAGGGTTACGGGAAGGGGCTGTGAAAGACACGAGGAAGGGTCTTTGAGAAAAACACTATaGTTCATCAGCCCAATCTTT | + |
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Preference number: 2 (lower is better) Translates to: QGQGRVTGRGCERHEEGSLRKTL*FISPIF Trigger: AAAGATTGGGCTGATGAAGCATAGTGTTTTTCTCAA...AGACCCTTCCTCGTGTCTTTCACAGCCCCTTCCCGTAACCCTTCCCTGTCCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
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| 3UTR-3UTR GCA 90 bp | GAATGGATAAACAGAGACCACGGTTTGTCTATACAGTGTAATGGGCTTTTGACGGCAAGCTCTCAGTGTTaGCACTTAGGTGGAAGGGCC | + |
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Preference number: 2 (lower is better) Translates to: EWINRDHGLSIQCNGLLTASSQC*HLGGRA Trigger: GGCCCTTCCACCTAAGTGGCAACACTGAGAGCTTGC...CGTCAAAAGCCCATTACACTGTATAGACAAACCGTGGTCTCTGTTTATCCATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092302.11 ENSMUST00000103014.4 |
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| 3UTR-3UTR GCA 90 bp | GATGAATGGATAAACAGAGACCACGGTTTGTCTATACAGTGTAATGGGCTTTTGCCACAAGAGACCCTTTaGCCCAGTCTGGCAAGCCCT | + |
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Preference number: 2 (lower is better) Translates to: DEWINRDHGLSIQCNGLLPQETL*PSLASP Trigger: AGGGCTTGCCAGACTGGGGCAAAGGGTCTCTTGTGG...CAAAAGCCCATTACACTGTATAGACAAACCGTGGTCTCTGTTTATCCATTCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092302.11 ENSMUST00000103014.4 |
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| 3UTR-3UTR CCA 90 bp | TGGGCACACATCAGAACGGTGGCACTGAGTAAAATATGTCAGATGGAAAAAGATAAAATTCCCAGTGCCTaGGGGCCCTCCTCTTGCCAA | + |
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Preference number: 2 (lower is better) Translates to: WAHIRTVALSKICQMEKDKIPSA*GPSSCQ Trigger: TTGGCAAGAGGAGGGCCCCCAGGCACTGGGAATTTT...ATCTTTTTCCATCTGACATATTTTACTCAGTGCCACCGTTCTGATGTGTGCCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000092302.11 ENSMUST00000103014.4 |
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| 3UTR-3UTR TCA 90 bp | TTGAAGTCCCACCACCATGAGAGGCCCTTAAACTCAACATGTGACTCAAGAAAATTCCAAGGGCTGTTCTaGGAAACCCCCAAAGTAGAG | + |
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Preference number: 2 (lower is better) Translates to: LKSHHHERPLNSTCDSRKFQGLF*ETPKVE Trigger: CTCTACTTTGGGGGTTTCTCAGAACAGCCCTTGGAA...TTTTCTTGAGTCACATGTTGAGTTTAAGGGCCTCTCATGGTGGTGGGACTTCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
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| 3UTR-3UTR GCA 90 bp | TGCCAAAAGATGACAAGGTCACAAAAGGTCATTTCCTGTTGGCTAGCATTGGCAGCTACTAAAGGCAGGTaGCACCTGAGCATGAAGACT | + |
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Preference number: 2 (lower is better) Translates to: CQKMTRSQKVISCWLALAATKGR*HLSMKT Trigger: AGTCTTCATGCTCAGGTGGCACCTGCCTTTAGTAGC...TGCCAATGCTAGCCAACAGGAAATGACCTTTTGTGACCTTGTCATCTTTTGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092302.11 ENSMUST00000103014.4 |
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| 3UTR-3UTR GCA 90 bp | GTCAAGTTCTGTTCCTCCATTCACTGGCTGCAAAATCTCTGGGAATGTTTCTTATTTGCATCCCTCTTGTaGCCACCTGGAATGCTGACC | + |
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Preference number: 2 (lower is better) Translates to: VKFCSSIHWLQNLWECFLFASLL*PPGMLT Trigger: GGTCAGCATTCCAGGTGGGCACAAGAGGGATGCAAA...TAAGAAACATTCCCAGAGATTTTGCAGCCAGTGAATGGAGGAACAGAACTTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
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| 3UTR-3UTR CCA 90 bp | TGGGCACACATCAGAACGGTGGCACTGAGTAAAATATGTCAGATGGAAAAAGATTTCTGGAGTCCTTCTTaGTGCTGCTTAGCCCAGGGT | + |
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Preference number: 2 (lower is better) Translates to: WAHIRTVALSKICQMEKDFWSPS*CCLAQG Trigger: ACCCTGGGCTAAGCAGCACCAAGAAGGACTCCAGAA...ATCTTTTTCCATCTGACATATTTTACTCAGTGCCACCGTTCTGATGTGTGCCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092302.11 ENSMUST00000103014.4 |
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| 3UTR-3UTR GCA 90 bp | TTCCTCCATTCACTGGCTGCAAAATCTCTGGGAATGTTTCTTAGTCTCAGAGCAAGTCCAAGAAATCCATaGCTTCTGTGGTTTCCCACC | + |
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Preference number: 2 (lower is better) Translates to: FLHSLAAKSLGMFLSLRASPRNP*LLWFPT Trigger: GGTGGGAAACCACAGAAGGCATGGATTTCTTGGACT...TGCTCTGAGACTAAGAAACATTCCCAGAGATTTTGCAGCCAGTGAATGGAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092302.11 ENSMUST00000103014.4 |
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| 3UTR-3UTR GCA 90 bp | GAGATTAGGGGGTCTCAAAAAGTCTTCTGTGTACAGTTGTTGGAACCTAGATTCAGTCCTTCTTGGTGCTaGTTAGCCCAGGGTTTACTC | + |
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Preference number: 2 (lower is better) Translates to: EIRGSQKVFCVQLLEPRFSPSWC*LAQGLL Trigger: GAGTAAACCCTGGGCTAAGCAGCACCAAGAAGGACT...GAATCTAGGTTCCAACAACTGTACACAGAAGACTTTTTGAGACCCCCTAATCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
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| 3UTR-3UTR GCA 90 bp | GAATGGATAAACAGAGACCACGGTTTGTCTATACAGTGTAATGGGCTTTTGACGTGGAGTCCTTCTTGGTaGTGCTTAGCCCAGGGTTTA | + |
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Preference number: 2 (lower is better) Translates to: EWINRDHGLSIQCNGLLTWSPSW*CLAQGL Trigger: TAAACCCTGGGCTAAGCAGCACCAAGAAGGACTCCA...CGTCAAAAGCCCATTACACTGTATAGACAAACCGTGGTCTCTGTTTATCCATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092302.11 ENSMUST00000103014.4 |
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| 3UTR-3UTR CCA 90 bp | GAATGGATAAACAGAGACCACGGTTTGTCTATACAGTGTAATGGGCTTTTGACGTCTCCGAGGCCAGACTaGATGTCAAGTTCTGTTCCT | + |
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Preference number: 2 (lower is better) Translates to: EWINRDHGLSIQCNGLLTSPRPD*MSSSVP Trigger: AGGAACAGAACTTGACATCCAGTCTGGCCTCGGAGA...CGTCAAAAGCCCATTACACTGTATAGACAAACCGTGGTCTCTGTTTATCCATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092302.11 ENSMUST00000103014.4 |
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| 3UTR-3UTR CCA 90 bp | TTAGTCACCTCTCAGCCCCACAGGGCAGTTTCTGAAAACTTAAGTAAGAACCTGAAGGTCATTTCCTGTTaGCTAGCATTGGCAAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: LVTSQPHRAVSENLSKNLKVISC*LALASS Trigger: AGAGCTTGCCAATGCTAGCCAACAGGAAATGACCTT...CAGGTTCTTACTTAAGTTTTCAGAAACTGCCCTGTGGGGCTGAGAGGTGACTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
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| 3UTR-3UTR GCA 90 bp | GAATGGATAAACAGAGACCACGGTTTGTCTATACAGTGTAATGGGCTTTTGACGAGTCCAAGAAATCCATaGCTTCTGTGGTTTCCCACC | + |
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Preference number: 2 (lower is better) Translates to: EWINRDHGLSIQCNGLLTSPRNP*LLWFPT Trigger: GGTGGGAAACCACAGAAGGCATGGATTTCTTGGACT...CGTCAAAAGCCCATTACACTGTATAGACAAACCGTGGTCTCTGTTTATCCATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092302.11 ENSMUST00000103014.4 |
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| 3UTR-3UTR GCA 90 bp | TTATTTGTGAAAACAGAAGCTAGGTGGGAACAACACAGACATCCATCAACAGATGAGGAAGGGTCTGTGTaGTCATTCTCACCTGCAGTG | + |
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Preference number: 2 (lower is better) Translates to: LFVKTEARWEQHRHPSTDEEGSV*SFSPAV Trigger: CACTGCAGGTGAGAATGAGCACACAGACCCTTCCTC...ATCTGTTGATGGATGTCTGTGTTGTTCCCACCTAGCTTCTGTTTTCACAAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092302.11 ENSMUST00000103014.4 |
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| 3UTR-3UTR CCA 90 bp | CTCCTCTTGCCAAAAGATGACAAGGTCACAAAAGGTCATTTCCTGTTGGCTAGCTGGCTGCAAAATCTCTaGGAATGTTTCTTAGTCTCA | + |
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Preference number: 2 (lower is better) Translates to: LLLPKDDKVTKGHFLLASWLQNL*ECFLVS Trigger: TGAGACTAAGAAACATTCCCAGAGATTTTGCAGCCA...GCTAGCCAACAGGAAATGACCTTTTGTGACCTTGTCATCTTTTGGCAAGAGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000092302.11 ENSMUST00000103014.4 |
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| 3UTR CAA 90 bp | CAAGTAGTCAGAGAAGGTTTCAAGGAACAGGAAGATTTGAAAGTGTaGGCCCTTCAAGCAGTAACAGGTTTAAATTGGGATGGCTCTTAC | + |
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Preference number: 2 (lower is better) Translates to: QVVREGFKEQEDLKV*ALQAVTGLNWDGSY Trigger: GTAAGAGCCATCCCAATTTAAACCTGTTACTGCTTGAAGGGCCAACACTTTCAAATCTTCCTGTTCCTTGAAACCTTCTCTGACTACTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
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| 3UTR CAA 90 bp | TTGGCTGAGATTAGGGGGTCTCAAAAAGTCTTCTGTGTACAGTTGTaGGAACCTAGATTCATTGCTCCCTATTGGATAAGATTCCTGAGT | + |
|
Preference number: 2 (lower is better) Translates to: LAEIRGSQKVFCVQL*EPRFIAPYWIRFLS Trigger: ACTCAGGAATCTTATCCAATAGGGAGCAATGAATCTAGGTTCCAACAACTGTACACAGAAGACTTTTTGAGACCCCCTAATCTCAGCCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
||
| 3UTR-3UTR TCA 90 bp | GAATGGATAAACAGAGACCACGGTTTGTCTATACAGTGTAATGGGCTTTTGACGGGTCCACCCATACAGTaGAATATTACTCTACCACAA | + |
|
Preference number: 2 (lower is better) Translates to: EWINRDHGLSIQCNGLLTGPPIQ*NITLPQ Trigger: TTGTGGTAGAGTAATATTTCACTGTATGGGTGGACC...CGTCAAAAGCCCATTACACTGTATAGACAAACCGTGGTCTCTGTTTATCCATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
||
| 3UTR-3UTR CCA 90 bp | GATGAATGGATAAACAGAGACCACGGTTTGTCTATACAGTGTAATGGGCTTTTGAAGGTCATTTCCTGTTaGCTAGCATTGGCAAGCTCT | + |
|
Preference number: 2 (lower is better) Translates to: DEWINRDHGLSIQCNGLLKVISC*LALASS Trigger: AGAGCTTGCCAATGCTAGCCAACAGGAAATGACCTT...CAAAAGCCCATTACACTGTATAGACAAACCGTGGTCTCTGTTTATCCATTCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092302.11 ENSMUST00000103014.4 |
||
| 3UTR-3UTR CCA 90 bp | TTGAAGTCCCACCACCATGAGAGGCCCTTAAACTCAACATGTGACTCAAGAAAAGTAACAGGTTTAAATTaGGATGGCTCTTACACCGAA | + |
|
Preference number: 2 (lower is better) Translates to: LKSHHHERPLNSTCDSRKVTGLN*DGSYTE Trigger: TTCGGTGTAAGAGCCATCCCAATTTAAACCTGTTAC...TTTTCTTGAGTCACATGTTGAGTTTAAGGGCCTCTCATGGTGGTGGGACTTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
||
| 3UTR CAA 90 bp | ACAGTAGCTCAAGTAGTCAGAGAAGGTTTCAAGGAACAGGAAGATTaGAAAGTGTTGGCCCTTCAAGCAGTAACAGGTTTAAATTGGGAT | + |
|
Preference number: 2 (lower is better) Translates to: TVAQVVREGFKEQED*KVLALQAVTGLNWD Trigger: ATCCCAATTTAAACCTGTTACTGCTTGAAGGGCCAACACTTTCAAATCTTCCTGTTCCTTGAAACCTTCTCTGACTACTTGAGCTACTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
||
| 3UTR-3UTR TCA 90 bp | TTATTTGTGAAAACAGAAGCTAGGTGGGAACAACACAGACATCCATCAACAGATCCTCTTGCCAAAAGATaGCAAGGTCACAAAAGGTCA | + |
|
Preference number: 2 (lower is better) Translates to: LFVKTEARWEQHRHPSTDPLAKR*QGHKRS Trigger: TGACCTTTTGTGACCTTGTCATCTTTTGGCAAGAGG...ATCTGTTGATGGATGTCTGTGTTGTTCCCACCTAGCTTCTGTTTTCACAAATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000092302.11 ENSMUST00000103014.4 |
||
| 3UTR-3UTR CCA 90 bp | TGGATAAACAGAGACCACGGTTTGTCTATACAGTGTAATGGGCTTTTGACGCATTGGCTGCAAAATCTCTaGGAATGTTTCTTAGTCTCA | + |
|
Preference number: 2 (lower is better) Translates to: WINRDHGLSIQCNGLLTHWLQNL*ECFLVS Trigger: TGAGACTAAGAAACATTCCCAGAGATTTTGCAGCCA...ATGCGTCAAAAGCCCATTACACTGTATAGACAAACCGTGGTCTCTGTTTATCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092302.11 ENSMUST00000103014.4 |
||
| 3UTR CCA 72 bp | AGGAGGCCTCAGATCTCCTGCAAGTGGAGTGGCAGGTaGCCGCGAGCTGCTGGGAACCGAAGTCAGGTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: RRPQISCKWSGR*PRAAGNRSQVL Trigger: GAGAACCTGACTTCGGTTCCCAGCAGCTCGCGGCCACCTGCCACTCCACTTGCAGGAGATCTGAGGCCTCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
||
| 3UTR GCA 72 bp | GATCTCCTGCAAGTGGAGTGGCAGGTGGCCGCGAGCTaGTGGGAACCGAAGTCAGGTTCTCTGCAAGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: DLLQVEWQVAAS*WEPKSGSLQEQ Trigger: CTGCTCTTGCAGAGAACCTGACTTCGGTTCCCAGCAGCTCGCGGCCACCTGCCACTCCACTTGCAGGAGATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
||
| 3UTR CCA 72 bp | CTCCTGCAAGTGGAGTGGCAGGTGGCCGCGAGCTGCTaGGAACCGAAGTCAGGTTCTCTGCAAGAGCAGTAC | + |
|
Preference number: 3 (lower is better) Translates to: LLQVEWQVAASC*EPKSGSLQEQY Trigger: GTACTGCTCTTGCAGAGAACCTGACTTCGGTTCCCAGCAGCTCGCGGCCACCTGCCACTCCACTTGCAGGAG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
||
| 3UTR GCA 72 bp | TACTCCCTGGTTCTAGGCACACCACAAGAGACCCTTTaGCCCAGTCTGGCAAGCCCTCAAGCACGGAGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: YSLVLGTPQETL*PSLASPQARRS Trigger: GGACCTCCGTGCTTGAGGGCTTGCCAGACTGGGGCAAAGGGTCTCTTGTGGTGTGCCTAGAACCAGGGAGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092302.11 ENSMUST00000103014.4 |
||
| 3UTR CCA 72 bp | ACAAAGGCAAAAAGGAGGCCTCAGATCTCCTGCAAGTaGAGTGGCAGGTGGCCGCGAGCTGCTGGGAACCGA | + |
|
Preference number: 3 (lower is better) Translates to: TKAKRRPQISCK*SGRWPRAAGNR Trigger: TCGGTTCCCAGCAGCTCGCGGCCACCTGCCACTCCACTTGCAGGAGATCTGAGGCCTCCTTTTTGCCTTTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
||
| 3UTR-3UTR CAA 90 bp | CAGGGACAGGGAAGGGTTACGGGAAGGGGCTGTGAAAGACACGAGGAAGGGTCTGGCAAGCTCTCAGTGTaGCCACTTAGGTGGAAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: QGQGRVTGRGCERHEEGSGKLSV*PLRWKG Trigger: GCCCTTCCACCTAAGTGGCAACACTGAGAGCTTGCC...AGACCCTTCCTCGTGTCTTTCACAGCCCCTTCCCGTAACCCTTCCCTGTCCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092302.11 ENSMUST00000103014.4 |
||
| 3UTR TCA 72 bp | GTCCAAGAAATCCATGCCTTCTGTGGTTTCCCACCATaGCTGCAACACCCCTCAGGGCCCAGTCAGCCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: VQEIHAFCGFPP*LQHPSGPSQPS Trigger: GCTGGGCTGACTGGGCCCTGAGGGGTGTTGCAGTCATGGTGGGAAACCACAGAAGGCATGGATTTCTTGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
||
| 3UTR GCA 72 bp | GGTCCACCATCTGCCATCCCACCGTTTCTTATTACCTaGCAAAATTCCCAGTGCCTGGGGGCCCTCCTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: GPPSAIPPFLIT*QNSQCLGALLL Trigger: CAAGAGGAGGGCCCCCAGGCACTGGGAATTTTGGCAGGTAATAAGAAACGGTGGGATGGCAGATGGTGGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092302.11 ENSMUST00000103014.4 |
||
| 3UTR CCA 72 bp | GCTAGCATTGGCAAGCTCTCAGTGTTGCCACTTAGGTaGAAGGGCCATGATTCCCAAGGCCACAGAGGCATG | + |
|
Preference number: 3 (lower is better) Translates to: ASIGKLSVLPLR*KGHDSQGHRGM Trigger: CATGCCTCTGTGGCCTTGGGAATCATGGCCCTTCCACCTAAGTGGCAACACTGAGAGCTTGCCAATGCTAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092302.11 ENSMUST00000103014.4 |
||
| 3UTR CCA 72 bp | GGCCCAGTCAGCCCAGCTAGGGACGAGGATGCTACATaGCTTGGGAATGGTTGGAGGCACTACATAAAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: GPVSPARDEDAT*LGNGWRHYIKN Trigger: GTTCTTTATGTAGTGCCTCCAACCATTCCCAAGCCATGTAGCATCCTCGTCCCTAGCTGGGCTGACTGGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
||
| 3UTR TCA 72 bp | ACTCAACATAGATGGACCAGGACGCTGATAGCCTTCTaGCCAGAGTCTGAGGGGAACTCGGAGACCCTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: TQHRWTRTLIAF*PESEGNSETLH Trigger: ATGGAGGGTCTCCGAGTTCCCCTCAGACTCTGGTCAGAAGGCTATCAGCGTCCTGGTCCATCTATGTTGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
||
| 3UTR CCA 72 bp | CAAATTCTCTGGAGTCCAAGAAATCCATGCCTTCTGTaGTTTCCCACCATGACTGCAACACCCCTCAGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: QILWSPRNPCLL*FPTMTATPLRA Trigger: GGCCCTGAGGGGTGTTGCAGTCATGGTGGGAAACCACAGAAGGCATGGATTTCTTGGACTCCAGAGAATTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
||
| 3UTR-3UTR CAA 90 bp | TTAGTCACCTCTCAGCCCCACAGGGCAGTTTCTGAAAACTTAAGTAAGAACCTGGGCAAGCTCTCAGTGTaGCCACTTAGGTGGAAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: LVTSQPHRAVSENLSKNLGKLSV*PLRWKG Trigger: GCCCTTCCACCTAAGTGGCAACACTGAGAGCTTGCC...CAGGTTCTTACTTAAGTTTTCAGAAACTGCCCTGTGGGGCTGAGAGGTGACTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
||
| 3UTR-3UTR CAA 90 bp | CAGGGACAGGGAAGGGTTACGGGAAGGGGCTGTGAAAGACACGAGGAAGGGTCTACTGTATCAGGAAGGTaGCAAATTCCAGTCCAAAAT | + |
|
Preference number: 3 (lower is better) Translates to: QGQGRVTGRGCERHEEGSTVSGR*QIPVQN Trigger: ATTTTGGACTGGAATTTGCAACCTTCCTGATACAGT...AGACCCTTCCTCGTGTCTTTCACAGCCCCTTCCCGTAACCCTTCCCTGTCCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
||
| 3UTR CCA 72 bp | AAGACAGCCCTGGAAGAGAACCTGCATGATAAGGGCTaGACCCTGAGCTTTGTCCACTTTACCCTCTTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: KTALEENLHDKG*TLSFVHFTLFR Trigger: TCTGAAGAGGGTAAAGTGGACAAAGCTCAGGGTCCAGCCCTTATCATGCAGGTTCTCTTCCAGGGCTGTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
||
| 3UTR CCA 72 bp | AAAGCCCAGAGTTTGGTTCACAGCATCCACATCCCGTaGTTCACAACTACCTGTAACTCCAGCTCCAAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: KAQSLVHSIHIP*FTTTCNSSSKG Trigger: TCCCTTGGAGCTGGAGTTACAGGTAGTTGTGAACCACGGGATGTGGATGCTGTGAACCAAACTCTGGGCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
||
| 3UTR-3UTR CAA 90 bp | AGGGCCCAGTCAGCCCAGCTAGGGACGAGGATGCTACATGGCTTGGGAATGGTTGGGGCACATGCTATATaGTTACAGTCATATAAAACT | + |
|
Preference number: 3 (lower is better) Translates to: RAQSAQLGTRMLHGLGMVGAHAI*LQSYKT Trigger: AGTTTTATATGACTGTAACAATATAGCATGTGCCCC...AACCATTCCCAAGCCATGTAGCATCCTCGTCCCTAGCTGGGCTGACTGGGCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
||
| 3UTR-3UTR CAA 90 bp | TGGCTATCACCTACAGTAGCTCAAGTAGTCAGAGAAGGTTTCAAGGAACAGGAACCAAAAGCCCAGAGTTaGGTTCACAGCATCCACATC | + |
|
Preference number: 3 (lower is better) Translates to: WLSPTVAQVVREGFKEQEPKAQS*VHSIHI Trigger: GATGTGGATGCTGTGAACCAAACTCTGGGCTTTTGG...TTCCTGTTCCTTGAAACCTTCTCTGACTACTTGAGCTACTGTAGGTGATAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
||
| 3UTR-3UTR CAA 90 bp | CTGGGAACCGAAGTCAGGTTCTCTGCAAGAGCAGTACCTGCTGTTAGTCACCTCATGGAGATTGGAAACTaGGCTCAACAAATAATGGTA | + |
|
Preference number: 3 (lower is better) Translates to: LGTEVRFSARAVPAVSHLMEIGN*AQQIMV Trigger: TACCATTATTTGTTGAGCCAAGTTTCCAATCTCCAT...GAGGTGACTAACAGCAGGTACTGCTCTTGCAGAGAACCTGACTTCGGTTCCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
||
| 3UTR TCA 72 bp | TGTGTCACCTATACTTCCATAGAGATGGATGTGAGCTaGGGTTTTCCAAGGGCTGTTCTGAGAAACCCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: CVTYTSIEMDVS*GFPRAVLRNPQ Trigger: TTGGGGGTTTCTCAGAACAGCCCTTGGAAAACCTCAGCTCACATCCATCTCTATGGAAGTATAGGTGACACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092302.11 ENSMUST00000103014.4 |
||
| 3UTR TCA 72 bp | ACGAGGAAGGGTCTGTGTGCTCATTCTCACCTGCAGTaGGAAATTTTGTGGCTGACTCTCCACGTTATCAAA | + |
|
Preference number: 3 (lower is better) Translates to: TRKGLCAHSHLQ*EILWLTLHVIK Trigger: TTTGATAACGTGGAGAGTCAGCCACAAAATTTCTCACTGCAGGTGAGAATGAGCACACAGACCCTTCCTCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092302.11 ENSMUST00000103014.4 |
||
| 3UTR GCA 72 bp | AGGGCAGTTTCTGAAAACTTAAGTAAGAACCTGCCGTaGAACCCAGGTTTTCTCTCTCAGGGCTCATACAGT | + |
|
Preference number: 3 (lower is better) Translates to: RAVSENLSKNLP*NPGFLSQGSYS Trigger: ACTGTATGAGCCCTGAGAGAGAAAACCTGGGTTGCACGGCAGGTTCTTACTTAAGTTTTCAGAAACTGCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
||
| 3UTR CCA 72 bp | AGCTTTGTCCACTTTACCCTCTTCAGATTCTTAAACTaGTCAGGTTCTCTCCCACATCGTGGCCTTTGCATC | + |
|
Preference number: 3 (lower is better) Translates to: SFVHFTLFRFLN*SGSLPHRGLCI Trigger: GATGCAAAGGCCACGATGTGGGAGAGAACCTGACCAGTTTAAGAATCTGAAGAGGGTAAAGTGGACAAAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
||
| 3UTR TCA 72 bp | CAGAGCATCCATTTCTTCTTCTCTAAGATGGATCGGTaGCATCACCTAGTTGTCTACCAACTGTGGCAACTG | + |
|
Preference number: 3 (lower is better) Translates to: QSIHFFFSKMDR*HHLVVYQLWQL Trigger: CAGTTGCCACAGTTGGTAGACAACTAGGTGATGTCACCGATCCATCTTAGAGAAGAAGAAATGGATGCTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092302.11 ENSMUST00000103014.4 |
||
| 3UTR TCA 72 bp | CTGAGAAACCCCCAAAGTAGAGCTTTTGGAACATTCTaGACCAACAGTCTGTACAGTCCTAGCCATTCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: LRNPQSRAFGTF*TNSLYSPSHSP Trigger: AGGAGAATGGCTAGGACTGTACAGACTGTTGGTTCAGAATGTTCCAAAAGCTCTACTTTGGGGGTTTCTCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092302.11 ENSMUST00000103014.4 |
||
| 3UTR CCA 72 bp | GCCAGACTGGATGTCAAGTTCTGTTCCTCCATTCACTaGCTGCAAAATCTCTGGGAATGTTTCTTAGTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: ARLDVKFCSSIH*LQNLWECFLVS Trigger: TGAGACTAAGAAACATTCCCAGAGATTTTGCAGCCAGTGAATGGAGGAACAGAACTTGACATCCAGTCTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092302.11 ENSMUST00000103014.4 |
||
| 3UTR GCA 72 bp | GGAGATTGGAAACTTGGCTCAACAAATAATGGTACTTaGTGTTCTCCCAAAAGCCCAGAGTTTGGTTCACAG | + |
|
Preference number: 3 (lower is better) Translates to: GDWKLGSTNNGT*CSPKSPEFGSQ Trigger: CTGTGAACCAAACTCTGGGCTTTTGGGAGAACAGCAAGTACCATTATTTGTTGAGCCAAGTTTCCAATCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
||
| 3UTR CCA 72 bp | CAAAAGATGACAAGGTCACAAAAGGTCATTTCCTGTTaGCTAGCATTGGCAAGCTCTCAGTGTTGCCACTTA | + |
|
Preference number: 3 (lower is better) Translates to: QKMTRSQKVISC*LALASSQCCHL Trigger: TAAGTGGCAACACTGAGAGCTTGCCAATGCTAGCCAACAGGAAATGACCTTTTGTGACCTTGTCATCTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092302.11 ENSMUST00000103014.4 |
||
| 3UTR-3UTR CAA 90 bp | TGGGCACACATCAGAACGGTGGCACTGAGTAAAATATGTCAGATGGAAAAAGATAGTAACAGGTTTAAATaGGGATGGCTCTTACACCGA | + |
|
Preference number: 3 (lower is better) Translates to: WAHIRTVALSKICQMEKDSNRFK*GWLLHR Trigger: TCGGTGTAAGAGCCATCCCAATTTAAACCTGTTACT...ATCTTTTTCCATCTGACATATTTTACTCAGTGCCACCGTTCTGATGTGTGCCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
||
| 3UTR-3UTR CAA 90 bp | TTGAAGTCCCACCACCATGAGAGGCCCTTAAACTCAACATGTGACTCAAGAAAAATTCATTGCTCCCTATaGGATAAGATTCCTGAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: LKSHHHERPLNSTCDSRKIHCSL*DKIPES Trigger: AGACTCAGGAATCTTATCCAATAGGGAGCAATGAAT...TTTTCTTGAGTCACATGTTGAGTTTAAGGGCCTCTCATGGTGGTGGGACTTCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
||
| 3UTR CCA 72 bp | AAGTTCTGTTCCTCCATTCACTGGCTGCAAAATCTCTaGGAATGTTTCTTAGTCTCAGAGCATCCATTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: KFCSSIHWLQNL*ECFLVSEHPFL Trigger: AAGAAATGGATGCTCTGAGACTAAGAAACATTCCCAGAGATTTTGCAGCCAGTGAATGGAGGAACAGAACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092302.11 ENSMUST00000103014.4 |
||
| 3UTR CCA 72 bp | CTGTATCAGGAAGGTTGCAAATTCCAGTCCAAAATCTaGTCCACCCATACAGTGAAATATTACTCTACCACA | + |
|
Preference number: 3 (lower is better) Translates to: LYQEGCKFQSKI*STHTVKYYSTT Trigger: TGTGGTAGAGTAATATTTCACTGTATGGGTGGACCAGATTTTGGACTGGAATTTGCAACCTTCCTGATACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
||
| 3UTR-3UTR CAA 90 bp | TTATTTGTGAAAACAGAAGCTAGGTGGGAACAACACAGACATCCATCAACAGATCCCAAAGTAGAGCTTTaGGAACATTCTGAACCAACA | + |
|
Preference number: 3 (lower is better) Translates to: LFVKTEARWEQHRHPSTDPKVEL*EHSEPT Trigger: TGTTGGTTCAGAATGTTCCAAAAGCTCTACTTTGGG...ATCTGTTGATGGATGTCTGTGTTGTTCCCACCTAGCTTCTGTTTTCACAAATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092302.11 ENSMUST00000103014.4 |
||
| 3UTR GCA 72 bp | ATAATAACAACACTTGAGAGACTGTATCAGGAAGGTTaGAAATTCCAGTCCAAAATCTGGTCCACCCATACA | + |
|
Preference number: 3 (lower is better) Translates to: IITTLERLYQEG*KFQSKIWSTHT Trigger: TGTATGGGTGGACCAGATTTTGGACTGGAATTTGCAACCTTCCTGATACAGTCTCTCAAGTGTTGTTATTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
||
| 3UTR CCA 72 bp | AGATGTTACTCAGCCATAATAATAAAGAATGGAGATTaGAAACTTGGCTCAACAAATAATGGTACTTGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: RCYSAIIIKNGD*KLGSTNNGTCC Trigger: ACAGCAAGTACCATTATTTGTTGAGCCAAGTTTCCAATCTCCATTCTTTATTATTATGGCTGAGTAACATCT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
||
| CDS-3UTR CCA 90 bp | GAGGCCTCAGATCTCCTGCAAGTGGAGTGGCAGGTGGCCGCGAGCTGCTGGGAATGGTGTCTGGAGAACTaGCACTCTGTGGCACACAAT | + |
|
Preference number: 4 (lower is better) Translates to: EASDLLQVEWQVAASCWEWCLEN*HSVAHN Trigger: ATTGTGTGCCACAGAGTGCCAGTTCTCCAGACACCA...TTCCCAGCAGCTCGCGGCCACCTGCCACTCCACTTGCAGGAGATCTGAGGCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
||
| CDS-3UTR CCA 90 bp | CTGGGAACCGAAGTCAGGTTCTCTGCAAGAGCAGTACCTGCTGTTAGTCACCTCAACTTGGTCACACCCTaGGGCTCAGCACCCTCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: LGTEVRFSARAVPAVSHLNLVTP*GSAPSA Trigger: GGCGGAGGGTGCTGAGCCCCAGGGTGTGACCAAGTT...GAGGTGACTAACAGCAGGTACTGCTCTTGCAGAGAACCTGACTTCGGTTCCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
||
| CDS-3UTR TCA 90 bp | TTTCCCACCATGACTGCAACACCCCTCAGGGCCCAGTCAGCCCAGCTAGGGACGCAGCATGTCACTGTGTaGAAGCCAAACTTGGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: FPTMTATPLRAQSAQLGTQHVTV*KPNLVT Trigger: TGTGACCAAGTTTGGCTTTCACACAGTGACATGCTG...CGTCCCTAGCTGGGCTGACTGGGCCCTGAGGGGTGTTGCAGTCATGGTGGGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
||
| CDS-3UTR GCA 90 bp | AGGGCCCAGTCAGCCCAGCTAGGGACGAGGATGCTACATGGCTTGGGAATGGTTGTAAAGGTGCAGGTCTaGCATCTGTTCCCCGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RAQSAQLGTRMLHGLGMVVKVQV*HLFPEL Trigger: AAGCTCGGGGAACAGATGGCAGACCTGCACCTTTAC...AACCATTCCCAAGCCATGTAGCATCCTCGTCCCTAGCTGGGCTGACTGGGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
||
| CDS-3UTR CCA 90 bp | CTAGCCATTCTCCTTCTGGAGTCCTTCTTGGTGCTGCTTAGCCCAGGGTTTACTAACTTGGTCACACCCTaGGGCTCAGCACCCTCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: LAILLLESFLVLLSPGFTNLVTP*GSAPSA Trigger: GGCGGAGGGTGCTGAGCCCCAGGGTGTGACCAAGTT...AGTAAACCCTGGGCTAAGCAGCACCAAGAAGGACTCCAGAAGGAGAATGGCTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092302.11 ENSMUST00000103014.4 |
||
| CDS-3UTR CCA 90 bp | CAGGGACAGGGAAGGGTTACGGGAAGGGGCTGTGAAAGACACGAGGAAGGGTCTTACATGGCTTGGGAATaGTTGGAGGCACTGTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: QGQGRVTGRGCERHEEGSYMAWE*LEALWD Trigger: ATCCCACAGTGCCTCCAACCATTCCCAAGCCATGTA...AGACCCTTCCTCGTGTCTTTCACAGCCCCTTCCCGTAACCCTTCCCTGTCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092302.11 |
||
| CDS-3UTR TCA 90 bp | TTCCTCCATTCACTGGCTGCAAAATCTCTGGGAATGTTTCTTAGTCTCAGAGCACGCAGTGTTGTGGTGTaGAGCTGGGCGCGCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FLHSLAAKSLGMFLSLRARSVVV*SWARSS Trigger: GCTGCTGCGCGCCCAGCTTCACACCACAACACTGCG...TGCTCTGAGACTAAGAAACATTCCCAGAGATTTTGCAGCCAGTGAATGGAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092302.11 ENSMUST00000103014.4 |
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| CDS-3UTR CCA 90 bp | GCTAGCATTGGCAAGCTCTCAGTGTTGCCACTTAGGTGGAAGGGCCATGATTCCGACGAGGATGCTACATaGCTTGGGAATGGTTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ASIGKLSVLPLRWKGHDSDEDAT*LGNGWR Trigger: CCTCCAACCATTCCCAAGCCATGTAGCATCCTCGTC...GGAATCATGGCCCTTCCACCTAAGTGGCAACACTGAGAGCTTGCCAATGCTAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092302.11 |
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| CDS-3UTR TCA 90 bp | TGGATAAACAGAGACCACGGTTTGTCTATACAGTGTAATGGGCTTTTGACGCATCGCAGTGTTGTGGTGTaGAGCTGGGCGCGCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: WINRDHGLSIQCNGLLTHRSVVV*SWARSS Trigger: GCTGCTGCGCGCCCAGCTTCACACCACAACACTGCG...ATGCGTCAAAAGCCCATTACACTGTATAGACAAACCGTGGTCTCTGTTTATCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092302.11 ENSMUST00000103014.4 |
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| CDS-3UTR CCA 90 bp | CCATTCTCCTTCTGGAGTCCTTCTTGGTGCTGCTTAGCCCAGGGTTTACTCCCTCCAGAGCTTCAGGAATaGTCCTCACTAAGTGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PFSFWSPSWCCLAQGLLPPELQE*SSLSEG Trigger: ACCCTCACTTAGTGAGGACCATTCCTGAAGCTCTGG...AGGGAGTAAACCCTGGGCTAAGCAGCACCAAGAAGGACTCCAGAAGGAGAATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
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| CDS-3UTR GCA 90 bp | TTGAAGTCCCACCACCATGAGAGGCCCTTAAACTCAACATGTGACTCAAGAAAAGTGCCCCCGAGAGGATaGCCCCACTCTAACACTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LKSHHHERPLNSTCDSRKVPPRG*PHSNTH Trigger: GTGAGTGTTAGAGTGGGGGCATCCTCTCGGGGGCAC...TTTTCTTGAGTCACATGTTGAGTTTAAGGGCCTCTCATGGTGGTGGGACTTCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
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| CDS-3UTR TCA 90 bp | CTAGCCATTCTCCTTCTGGAGTCCTTCTTGGTGCTGCTTAGCCCAGGGTTTACTCAGCATGTCACTGTGTaGAAGCCAAACTTGGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: LAILLLESFLVLLSPGFTQHVTV*KPNLVT Trigger: TGTGACCAAGTTTGGCTTTCACACAGTGACATGCTG...AGTAAACCCTGGGCTAAGCAGCACCAAGAAGGACTCCAGAAGGAGAATGGCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092302.11 ENSMUST00000103014.4 |
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| 3UTR CAA 72 bp | ACAAGGTCACAAAAGGTCATTTCCTGTTGGCTAGCATaGGCAAGCTCTCAGTGTTGCCACTTAGGTGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TRSQKVISCWLA*ASSQCCHLGGR Trigger: CCTTCCACCTAAGTGGCAACACTGAGAGCTTGCCAATGCTAGCCAACAGGAAATGACCTTTTGTGACCTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092302.11 ENSMUST00000103014.4 |
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| CDS-3UTR CCA 90 bp | TTCCTCCATTCACTGGCTGCAAAATCTCTGGGAATGTTTCTTAGTCTCAGAGCAGGATGCTACATGGCTTaGGAATGGTTGGAGGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: FLHSLAAKSLGMFLSLRAGCYMA*EWLEAL Trigger: CAGTGCCTCCAACCATTCCCAAGCCATGTAGCATCC...TGCTCTGAGACTAAGAAACATTCCCAGAGATTTTGCAGCCAGTGAATGGAGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092302.11 |
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| CDS-3UTR GCA 90 bp | GAATGGATAAACAGAGACCACGGTTTGTCTATACAGTGTAATGGGCTTTTGACGGTAAAGGTGCAGGTCTaGCATCTGTTCCCCGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: EWINRDHGLSIQCNGLLTVKVQV*HLFPEL Trigger: AAGCTCGGGGAACAGATGGCAGACCTGCACCTTTAC...CGTCAAAAGCCCATTACACTGTATAGACAAACCGTGGTCTCTGTTTATCCATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092302.11 ENSMUST00000103014.4 |
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| CDS-3UTR CCA 90 bp | TGGATAAACAGAGACCACGGTTTGTCTATACAGTGTAATGGGCTTTTGACGCATGACAGCCCCACCTCCTaGCAAGTCAATCACCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: WINRDHGLSIQCNGLLTHDSPTS*QVNHLH Trigger: ATGAAGGTGATTGACTTGCCAGGAGGTGGGGCTGTC...ATGCGTCAAAAGCCCATTACACTGTATAGACAAACCGTGGTCTCTGTTTATCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092302.11 ENSMUST00000103014.4 |
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| CDS-3UTR CCA 90 bp | GTCAAGTTCTGTTCCTCCATTCACTGGCTGCAAAATCTCTGGGAATGTTTCTTAGACAGCCCCACCTCCTaGCAAGTCAATCACCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VKFCSSIHWLQNLWECFLDSPTS*QVNHLH Trigger: ATGAAGGTGATTGACTTGCCAGGAGGTGGGGCTGTC...TAAGAAACATTCCCAGAGATTTTGCAGCCAGTGAATGGAGGAACAGAACTTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092302.11 ENSMUST00000103014.4 |
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| CDS-3UTR CCA 90 bp | TGGATAAACAGAGACCACGGTTTGTCTATACAGTGTAATGGGCTTTTGACGCATTGTGAAAGCCAAACTTaGTCACACCCTGGGGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: WINRDHGLSIQCNGLLTHCESQT*SHPGAQ Trigger: CTGAGCCCCAGGGTGTGACCAAGTTTGGCTTTCACA...ATGCGTCAAAAGCCCATTACACTGTATAGACAAACCGTGGTCTCTGTTTATCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092302.11 ENSMUST00000103014.4 |
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| 3UTR CAA 72 bp | ATAATGGTACTTGCTGTTCTCCCAAAAGCCCAGAGTTaGGTTCACAGCATCCACATCCCGTGGTTCACAACT | + |
|
Preference number: 4 (lower is better) Translates to: IMVLAVLPKAQS*VHSIHIPWFTT Trigger: AGTTGTGAACCACGGGATGTGGATGCTGTGAACCAAACTCTGGGCTTTTGGGAGAACAGCAAGTACCATTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
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| 3UTR CAA 72 bp | GCTCCAGTCAGTTGTGTAACGCCAGGAAAGTCAGATTaGGCTGAGATTAGGGGGTCTCAAAAAGTCTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: APVSCVTPGKSD*AEIRGSQKVFC Trigger: ACAGAAGACTTTTTGAGACCCCCTAATCTCAGCCAAATCTGACTTTCCTGGCGTTACACAACTGACTGGAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
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| CDS-3UTR CCA 90 bp | TGGATAAACAGAGACCACGGTTTGTCTATACAGTGTAATGGGCTTTTGACGCATTGGCTTGGGAATGGTTaGAGGCACTGTGGGATAAAG | + |
|
Preference number: 4 (lower is better) Translates to: WINRDHGLSIQCNGLLTHWLGNG*RHCGIK Trigger: CTTTATCCCACAGTGCCTCCAACCATTCCCAAGCCA...ATGCGTCAAAAGCCCATTACACTGTATAGACAAACCGTGGTCTCTGTTTATCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092302.11 |
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| 3UTR CAA 72 bp | CCAAAAGATGACAAGGTCACAAAAGGTCATTTCCTGTaGGCTAGCATTGGCAAGCTCTCAGTGTTGCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: PKDDKVTKGHFL*ASIGKLSVLPL Trigger: AAGTGGCAACACTGAGAGCTTGCCAATGCTAGCCAACAGGAAATGACCTTTTGTGACCTTGTCATCTTTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092302.11 ENSMUST00000103014.4 |
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| CDS-3UTR CCA 90 bp | GTCAAGTTCTGTTCCTCCATTCACTGGCTGCAAAATCTCTGGGAATGTTTCTTATCTAACACTCACCTGTaGGATAAAGCCACAGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: VKFCSSIHWLQNLWECFLSNTHL*DKATAC Trigger: ACATGCTGTGGCTTTATCCCACAGGTGAGTGTTAGA...TAAGAAACATTCCCAGAGATTTTGCAGCCAGTGAATGGAGGAACAGAACTTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
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| 3UTR CAA 72 bp | CATTTATTGAGCATCTGTCATGGCGAGAATACAAAATaGAATCTCAGAGTGAACACTTGTCTCCAGCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: HLLSICHGENTK*NLRVNTCLQLG Trigger: TCCCAGCTGGAGACAAGTGTTCACTCTGAGATTCAATTTTGTATTCTCGCCATGACAGATGCTCAATAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
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| 3UTR CAA 72 bp | AGAGAAGGTTTCAAGGAACAGGAAGATTTGAAAGTGTaGGCCCTTCAAGCAGTAACAGGTTTAAATTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: REGFKEQEDLKV*ALQAVTGLNWD Trigger: ATCCCAATTTAAACCTGTTACTGCTTGAAGGGCCAACACTTTCAAATCTTCCTGTTCCTTGAAACCTTCTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
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| 3UTR CAA 72 bp | ATTAGGGGGTCTCAAAAAGTCTTCTGTGTACAGTTGTaGGAACCTAGATTCATTGCTCCCTATTGGATAAGA | + |
|
Preference number: 4 (lower is better) Translates to: IRGSQKVFCVQL*EPRFIAPYWIR Trigger: TCTTATCCAATAGGGAGCAATGAATCTAGGTTCCAACAACTGTACACAGAAGACTTTTTGAGACCCCCTAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
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| CDS-3UTR CAA 90 bp | AGGGACAGGGAAGGGTTACGGGAAGGGGCTGTGAAAGACACGAGGAAGGGTCTGGCCTGTGTCCTGCGATaGACCTTGACAAACACGGGG | + |
|
Preference number: 5 (lower is better) Translates to: RDREGLREGAVKDTRKGLACVLR*TLTNTG Trigger: CCCCGTGTTTGTCAAGGTCAATCGCAGGACACAGGC...CAGACCCTTCCTCGTGTCTTTCACAGCCCCTTCCCGTAACCCTTCCCTGTCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092302.11 ENSMUST00000103014.4 |
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| CDS-3UTR CAA 90 bp | GCTAGCATTGGCAAGCTCTCAGTGTTGCCACTTAGGTGGAAGGGCCATGATTCCCAAAGGCCCGCAGTGTaGTGGTGTGAAGCTGGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: ASIGKLSVLPLRWKGHDSQRPAV*WCEAGR Trigger: GCGCCCAGCTTCACACCACAACACTGCGGGCCTTTG...GGAATCATGGCCCTTCCACCTAAGTGGCAACACTGAGAGCTTGCCAATGCTAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092302.11 ENSMUST00000103014.4 |
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| CDS CCA 90 bp | AAAGAGCTGGTACAGCAGCAGGCGCTTGTCGAACCCTGGAGCCTTTaGGATCTTCCGATGGTAGGCAGTGAAGAAGGATCTGGGGAACCC | + |
|
Preference number: 5 (lower is better) Translates to: KELVQQQALVEPWSL*DLPMVGSEEGSGEP Trigger: GGGTTCCCCAGATCCTTCTTCACTGCCTACCATCGGAAGATCCCAAAGGCTCCAGGGTTCGACAAGCGCCTGCTGCTGTACCAGCTCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026175.9 |
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| CDS CCA 90 bp | GTGAGGGTGCCCCCGAGAGGATGCCCCCACTCTAACACTCACCTGTaGGATAAAGCCACAGCATGTCACTGTGTGAAAGCCAAACTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: VRVPPRGCPHSNTHL*DKATACHCVKAKLG Trigger: ACCAAGTTTGGCTTTCACACAGTGACATGCTGTGGCTTTATCCCACAGGTGAGTGTTAGAGTGGGGGCATCCTCTCGGGGGCACCCTCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
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| CDS-3UTR CAA 90 bp | TTCCTCCATTCACTGGCTGCAAAATCTCTGGGAATGTTTCTTAGTCTCAGAGCACAAAGGCCCGCAGTGTaGTGGTGTGAAGCTGGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: FLHSLAAKSLGMFLSLRAQRPAV*WCEAGR Trigger: GCGCCCAGCTTCACACCACAACACTGCGGGCCTTTG...TGCTCTGAGACTAAGAAACATTCCCAGAGATTTTGCAGCCAGTGAATGGAGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092302.11 ENSMUST00000103014.4 |
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| CDS-3UTR CAA 90 bp | CTAGCCATTCTCCTTCTGGAGTCCTTCTTGGTGCTGCTTAGCCCAGGGTTTACTATGGCTTGGGAATGGTaGGAGGCACTGTGGGATAAA | + |
|
Preference number: 5 (lower is better) Translates to: LAILLLESFLVLLSPGFTMAWEW*EALWDK Trigger: TTTATCCCACAGTGCCTCCAACCATTCCCAAGCCAT...AGTAAACCCTGGGCTAAGCAGCACCAAGAAGGACTCCAGAAGGAGAATGGCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092302.11 |
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| CDS CCA 90 bp | CGATGCAATGGCCAGTTCAAACTCAGAATGGCCATAGAAGGAGGCTaGATCATAAATTACGGGTCCCTGGTCATCCTCAGCCACATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RCNGQFKLRMAIEGG*IINYGSLVILSHIS Trigger: GGAAATGTGGCTGAGGATGACCAGGGACCCGTAATTTATGATCCAGCCTCCTTCTATGGCCATTCTGAGTTTGAACTGGCCATTGCATCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026175.9 |
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| CDS-3UTR CAA 90 bp | TTCCTCCATTCACTGGCTGCAAAATCTCTGGGAATGTTTCTTAGTCTCAGAGCAGCCTGTGTCCTGCGATaGACCTTGACAAACACGGGG | + |
|
Preference number: 5 (lower is better) Translates to: FLHSLAAKSLGMFLSLRAACVLR*TLTNTG Trigger: CCCCGTGTTTGTCAAGGTCAATCGCAGGACACAGGC...TGCTCTGAGACTAAGAAACATTCCCAGAGATTTTGCAGCCAGTGAATGGAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092302.11 ENSMUST00000103014.4 |
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| CDS CAA 72 bp | TGCAGCCCCCTCCGGAGCTCCCAAAGGCCCGCAGTGTaGTGGTGTGAAGCTGGGCGCGCAGCAGCTGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: CSPLRSSQRPAV*WCEAGRAAAAP Trigger: TGGAGCAGCTGCTGCGCGCCCAGCTTCACACCACAACACTGCGGGCCTTTGGGAGCTCCGGAGGGGGCTGCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026175.9 ENSMUST00000092302.11 ENSMUST00000103014.4 |
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| CDS TCA 72 bp | CGGGGCCACTGTCAGTGTAGTAGGCATAGCCCTCGCTaGTGCAGCCCCCTCCGGAGCTCCCAAAGGCCCGCA | + |
|
Preference number: 6 (lower is better) Translates to: RGHCQCSRHSPR*CSPLRSSQRPA Trigger: TGCGGGCCTTTGGGAGCTCCGGAGGGGGCTGCATCAGCGAGGGCTATGCCTACTACACTGACAGTGGCCCCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026175.9 ENSMUST00000092302.11 ENSMUST00000103014.4 |
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| CDS CCA 72 bp | GGCCCAGTCAGCCCAGCTAGGGACGAGGATGCTACATaGCTTGGGAATGGTTGGAGGCACTGTGGGATAAAG | + |
|
Preference number: 6 (lower is better) Translates to: GPVSPARDEDAT*LGNGWRHCGIK Trigger: CTTTATCCCACAGTGCCTCCAACCATTCCCAAGCCATGTAGCATCCTCGTCCCTAGCTGGGCTGACTGGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092302.11 |
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| CDS CCA 72 bp | CCCCCGAGAGGATGCCCCCACTCTAACACTCACCTGTaGGATAAAGCCACAGCATGTCACTGTGTGAAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: PPRGCPHSNTHL*DKATACHCVKA Trigger: GGCTTTCACACAGTGACATGCTGTGGCTTTATCCCACAGGTGAGTGTTAGAGTGGGGGCATCCTCTCGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
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| CDS CCA 72 bp | ACAATGGGTCAGTGGCTAGCACCAGAGCTTCAGGAATaGTCCTCACTAAGTGAGGGTGCCCCCGAGAGGATG | + |
|
Preference number: 6 (lower is better) Translates to: TMGQWLAPELQE*SSLSEGAPERM Trigger: CATCCTCTCGGGGGCACCCTCACTTAGTGAGGACCATTCCTGAAGCTCTGGTGCTAGCCACTGACCCATTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
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| CDS CCA 72 bp | ACTGAGCGTCCTGGTGTCTGGAGAACTGGCACTCTGTaGCACACAATGGGTCAGTGGCTAGCACCAGAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: TERPGVWRTGTL*HTMGQWLAPEL Trigger: AAGCTCTGGTGCTAGCCACTGACCCATTGTGTGCCACAGAGTGCCAGTTCTCCAGACACCAGGACGCTCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
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| CDS CCA 72 bp | GTACAGCAGCAGGCGCTTGTCGAACCCTGGAGCCTTTaGGATCTTCCGATGGTAGGCAGTGAAGAAGGATCT | + |
|
Preference number: 6 (lower is better) Translates to: VQQQALVEPWSL*DLPMVGSEEGS Trigger: AGATCCTTCTTCACTGCCTACCATCGGAAGATCCCAAAGGCTCCAGGGTTCGACAAGCGCCTGCTGCTGTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026175.9 |
||
| CDS CCA 72 bp | AAAGAGCTGGTACAGCAGCAGGCGCTTGTCGAACCCTaGAGCCTTTGGGATCTTCCGATGGTAGGCAGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: KELVQQQALVEP*SLWDLPMVGSE Trigger: TTCACTGCCTACCATCGGAAGATCCCAAAGGCTCCAGGGTTCGACAAGCGCCTGCTGCTGTACCAGCTCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026175.9 |
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| CDS CAA 90 bp | TGTCTCTCGGTCAGCATAGTCCTTTTCAATGAGATCCAACTGAGCTaGGAGCCGGTGTCGAGTGAAGAAGGTCGGCCAGTCCTCCTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: CLSVSIVLFNEIQLS*EPVSSEEGRPVLLP Trigger: TGGCAGGAGGACTGGCCGACCTTCTTCACTCGACACCGGCTCCAAGCTCAGTTGGATCTCATTGAAAAGGACTATGCTGACCGAGAGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026175.9 |
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| CDS TCA 72 bp | AGGCACTGTGGGATAAAGCCACAGCATGTCACTGTGTaGAAGCCAAACTTGGTCACACCCTGGGGCTCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: RHCGIKPQHVTV*KPNLVTPWGSA Trigger: TGCTGAGCCCCAGGGTGTGACCAAGTTTGGCTTTCACACAGTGACATGCTGTGGCTTTATCCCACAGTGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092302.11 |
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| CDS TCA 72 bp | CTCACCTGTGGGATAAAGCCACAGCATGTCACTGTGTaGAAGCCAAACTTGGTCACACCCTGGGGCTCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: LTCGIKPQHVTV*KPNLVTPWGSA Trigger: TGCTGAGCCCCAGGGTGTGACCAAGTTTGGCTTTCACACAGTGACATGCTGTGGCTTTATCCCACAGGTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103014.4 |
||
| CDS CCA 72 bp | GCTAGGGACGAGGATGCTACATGGCTTGGGAATGGTTaGAGGCACTGTGGGATAAAGCCACAGCATGTCACT | + |
|
Preference number: 6 (lower is better) Translates to: ARDEDATWLGNG*RHCGIKPQHVT Trigger: AGTGACATGCTGTGGCTTTATCCCACAGTGCCTCCAACCATTCCCAAGCCATGTAGCATCCTCGTCCCTAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092302.11 |
||
| CDS TCA 72 bp | TTCACCTGTGGGATAAAGCCACAGCATGTCACTGTGTaGAAGCCAAACTTGGTCACACCCTGGGGCTCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: FTCGIKPQHVTV*KPNLVTPWGSA Trigger: TGCTGAGCCCCAGGGTGTGACCAAGTTTGGCTTTCACACAGTGACATGCTGTGGCTTTATCCCACAGGTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026175.9 |
||
| CDS CCA 72 bp | GGATGCTACATGGCTTGGGAATGGTTGGAGGCACTGTaGGATAAAGCCACAGCATGTCACTGTGTGAAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: GCYMAWEWLEAL*DKATACHCVKA Trigger: GGCTTTCACACAGTGACATGCTGTGGCTTTATCCCACAGTGCCTCCAACCATTCCCAAGCCATGTAGCATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092302.11 |
||
| CDS CAA 72 bp | GTCAGCATAGTCCTTTTCAATGAGATCCAACTGAGCTaGGAGCCGGTGTCGAGTGAAGAAGGTCGGCCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: VSIVLFNEIQLS*EPVSSEEGRPV Trigger: GACTGGCCGACCTTCTTCACTCGACACCGGCTCCAAGCTCAGTTGGATCTCATTGAAAAGGACTATGCTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026175.9 |
||
| CDS CAA 72 bp | TACCCGCAAACAGATCCGGGATCTTCACCTGTAGCCTaGACCACAGCTCTTGTGTCTCTCGGTCAGCATAGT | + |
|
Preference number: 6 (lower is better) Translates to: YPQTDPGSSPVA*TTALVSLGQHS Trigger: ACTATGCTGACCGAGAGACACAAGAGCTGTGGTCAAGGCTACAGGTGAAGATCCCGGATCTGTTTGCGGGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026175.9 |
||
| CDS CCA 72 bp | GGCCAGTTCAAACTCAGAATGGCCATAGAAGGAGGCTaGATCATAAATTACGGGTCCCTGGTCATCCTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GQFKLRMAIEGG*IINYGSLVILS Trigger: GCTGAGGATGACCAGGGACCCGTAATTTATGATCCAGCCTCCTTCTATGGCCATTCTGAGTTTGAACTGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026175.9 |
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