Pregenerated sensors for FMO2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040170Ensembl transcript IDs: ENSMUST00000045902.13, ENSMUST00000111510.8
Found 124 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCGGAGGGCTAAAGAAGAGCTATTTACTTAAACCTTCAGTATCCTaGCCTTTGTCCCCTCTGCAGAGGCTCTGGTCTGGTCTCTGGGCA | + |
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Preference number: 1 (lower is better) Translates to: LGGLKKSYLLKPSVS*PLSPLQRLWSGLWA Trigger: TGCCCAGAGACCAGACCAGAGCCTCTGCAGAGGGGACAAAGGCCAGGATACTGAAGGTTTAAGTAAATAGCTCTTCTTTAGCCCTCCGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
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| 3UTR GCA 90 bp | AGAGCTATTTACTTAAACCTTCAGTATCCTGGCCTTTGTCCCCTCTaGAGAGGCTCTGGTCTGGTCTCTGGGCATAGCTTATCTTTTGCA | + |
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Preference number: 1 (lower is better) Translates to: RAIYLNLQYPGLCPL*RGSGLVSGHSLSFA Trigger: TGCAAAAGATAAGCTATGCCCAGAGACCAGACCAGAGCCTCTGCAGAGGGGACAAAGGCCAGGATACTGAAGGTTTAAGTAAATAGCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
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| 3UTR TCA 90 bp | TCAAGTGCGTGCAGTTGCAGGGTTATGTGGAAACATATACAAACATaGGTACATAGGCCAGAGGTGAGACTCTGGTATTGCTCCTCAGGA | + |
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Preference number: 1 (lower is better) Translates to: SSACSCRVMWKHIQT*VHRPEVRLWYCSSG Trigger: TCCTGAGGAGCAATACCAGAGTCTCACCTCTGGCCTATGTACTCATGTTTGTATATGTTTCCACATAACCCTGCAACTGCACGCACTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
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| 3UTR TCA 90 bp | GGGTTATGTGGAAACATATACAAACATGAGTACATAGGCCAGAGGTaGGACTCTGGTATTGCTCCTCAGGATTCGCCCACTTTTGTTTTC | + |
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Preference number: 1 (lower is better) Translates to: GLCGNIYKHEYIGQR*DSGIAPQDSPTFVF Trigger: GAAAACAAAAGTGGGCGAATCCTGAGGAGCAATACCAGAGTCTCACCTCTGGCCTATGTACTCATGTTTGTATATGTTTCCACATAACCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
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| 3UTR TCA 90 bp | TATGTAGAGCAACCCAGCCTCAAACTGGTAGTAATCTGCCTGTCTTaGCTCCTTAGTGCTGGGATTAAAGGTCTGTACTACTGTGTTTAT | + |
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Preference number: 1 (lower is better) Translates to: YVEQPSLKLVVICLS*LLSAGIKGLYYCVY Trigger: ATAAACACAGTAGTACAGACCTTTAATCCCAGCACTAAGGAGTCAAGACAGGCAGATTACTACCAGTTTGAGGCTGGGTTGCTCTACATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
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| 3UTR GCA 90 bp | AAAGAGATGCTATCAGGAGTGTTTGTAGCCTGGTGTTTGCTATGTTaGTCAGTGTTTGTTGACACTAAACTGCTGGTGTCTCCTTTAGTT | + |
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Preference number: 1 (lower is better) Translates to: KEMLSGVFVAWCLLC*SVFVDTKLLVSPLV Trigger: AACTAAAGGAGACACCAGCAGTTTAGTGTCAACAAACACTGAGCAACATAGCAAACACCAGGCTACAAACACTCCTGATAGCATCTCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
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| 3UTR GCA 90 bp | AACCCTATAACCTCAGCCATTGTAGAGTTTCATCTGCTTGGGAGATaGACTTCACTTCATTTCTTATACTTTCACATGGTGATGATTAAA | + |
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Preference number: 1 (lower is better) Translates to: NPITSAIVEFHLLGR*TSLHFLYFHMVMIK Trigger: TTTAATCATCACCATGTGAAAGTATAAGAAATGAAGTGAAGTGCATCTCCCAAGCAGATGAAACTCTACAATGGCTGAGGTTATAGGGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
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| 3UTR CCA 90 bp | AAGTACTTCGTCAAGAGTGGACTATTCATTAATAAGCATATTGCATaGGGAGGTCATGAGCATAAGTTTCTGAGTTTAACAAATTGGGCT | + |
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Preference number: 1 (lower is better) Translates to: KYFVKSGLFINKHIA*GGHEHKFLSLTNWA Trigger: AGCCCAATTTGTTAAACTCAGAAACTTATGCTCATGACCTCCCCATGCAATATGCTTATTAATGAATAGTCCACTCTTGACGAAGTACTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
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| 3UTR TCA 90 bp | CAGCTATTTGCACAACAATTCATAAGAGTAGCAAAATTACAGTTATaGAGCAGCAATGAGATACTTTTATGGTTGAGGGTCACCACAACA | + |
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Preference number: 1 (lower is better) Translates to: QLFAQQFIRVAKLQL*SSNEILLWLRVTTT Trigger: TGTTGTGGTGACCCTCAACCATAAAAGTATCTCATTGCTGCTTCATAACTGTAATTTTGCTACTCTTATGAATTGTTGTGCAAATAGCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
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| 3UTR GCA 90 bp | TTGTATGTATATATGTGTATGCATATATGTTTGTGTGTGTTCAAGTaGGTGCAGTTGCAGGGTTATGTGGAAACATATACAAACATGAGT | + |
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Preference number: 1 (lower is better) Translates to: LYVYMCMHICLCVFK*VQLQGYVETYTNMS Trigger: ACTCATGTTTGTATATGTTTCCACATAACCCTGCAACTGCACGCACTTGAACACACACAAACATATATGCATACACATATATACATACAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
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| 3UTR-3UTR CCA 90 bp | GTTTTCATCTCCCTCCCCAATGCTGGGATTAGAAGTGTGTGCAGCCACACCGGGGGAGTGTTTGTAGCCTaGTGTTTGCTATGTTGCTCA | + |
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Preference number: 2 (lower is better) Translates to: VFISLPNAGIRSVCSHTGGVFVA*CLLCCS Trigger: TGAGCAACATAGCAAACACCAGGCTACAAACACTCC...CCCGGTGTGGCTGCACACACTTCTAATCCCAGCATTGGGGAGGGAGATGAAAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
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| 3UTR CAA 90 bp | CCCTCTGCAGAGGCTCTGGTCTGGTCTCTGGGCATAGCTTATCTTTaGCAGTGCGGTTCATGGAAAGAGATGCTATCAGGAGTGTTTGTA | + |
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Preference number: 2 (lower is better) Translates to: PSAEALVWSLGIAYL*QCGSWKEMLSGVFV Trigger: TACAAACACTCCTGATAGCATCTCTTTCCATGAACCGCACTGCAAAAGATAAGCTATGCCCAGAGACCAGACCAGAGCCTCTGCAGAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
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| 3UTR-3UTR TCA 90 bp | GCCTTTGTCCCCTCTGCAGAGGCTCTGGTCTGGTCTCTGGGCATAGCTTATCTTAAATTGGGCTTCAATTaGAGCCTCATCTCAAGACCA | + |
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Preference number: 2 (lower is better) Translates to: AFVPSAEALVWSLGIAYLKLGFN*SLISRP Trigger: TGGTCTTGAGATGAGGCTTCAATTGAAGCCCAATTT...AAGATAAGCTATGCCCAGAGACCAGACCAGAGCCTCTGCAGAGGGGACAAAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
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| 3UTR CAA 90 bp | GCCAGAGGTGAGACTCTGGTATTGCTCCTCAGGATTCGCCCACTTTaGTTTTCTGAGACAGGGTCTCTGACTGACCTGGAACTCATTAAA | + |
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Preference number: 2 (lower is better) Translates to: ARGETLVLLLRIRPL*FSETGSLTDLELIK Trigger: TTTAATGAGTTCCAGGTCAGTCAGAGACCCTGTCTCAGAAAACAAAAGTGGGCGAATCCTGAGGAGCAATACCAGAGTCTCACCTCTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
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| 3UTR-3UTR CCA 90 bp | GCCTTTGTCCCCTCTGCAGAGGCTCTGGTCTGGTCTCTGGGCATAGCTTATCTTAATAAGCATATTGCATaGGGAGGTCATGAGCATAAG | + |
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Preference number: 2 (lower is better) Translates to: AFVPSAEALVWSLGIAYLNKHIA*GGHEHK Trigger: CTTATGCTCATGACCTCCCCATGCAATATGCTTATT...AAGATAAGCTATGCCCAGAGACCAGACCAGAGCCTCTGCAGAGGGGACAAAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
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| 3UTR-3UTR TCA 90 bp | GTTTTCATCTCCCTCCCCAATGCTGGGATTAGAAGTGTGTGCAGCCACACCGGGGTAAAATATGGGTCCTaGAGCTCAAATTCAGATTCT | + |
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Preference number: 2 (lower is better) Translates to: VFISLPNAGIRSVCSHTGVKYGS*SSNSDS Trigger: AGAATCTGAATTTGAGCTTCAGGACCCATATTTTAC...CCCGGTGTGGCTGCACACACTTCTAATCCCAGCATTGGGGAGGGAGATGAAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
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| 3UTR-3UTR GCA 90 bp | GTTTTCATCTCCCTCCCCAATGCTGGGATTAGAAGTGTGTGCAGCCACACCGGGTGTGTTTATCCCAAGTaGTTTTTAAATTCCAGCGGA | + |
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Preference number: 2 (lower is better) Translates to: VFISLPNAGIRSVCSHTGCVYPK*FLNSSG Trigger: TCCGCTGGAATTTAAAAAGCACTTGGGATAAACACA...CCCGGTGTGGCTGCACACACTTCTAATCCCAGCATTGGGGAGGGAGATGAAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
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| 3UTR-3UTR CCA 90 bp | GTTTTCATCTCCCTCCCCAATGCTGGGATTAGAAGTGTGTGCAGCCACACCGGGGTGCCATCTGTAGAATaGGTGATATATATAGCTCTA | + |
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Preference number: 2 (lower is better) Translates to: VFISLPNAGIRSVCSHTGVPSVE*VIYIAL Trigger: TAGAGCTATATATATCACCCATTCTACAGATGGCAC...CCCGGTGTGGCTGCACACACTTCTAATCCCAGCATTGGGGAGGGAGATGAAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
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| 3UTR-3UTR CCA 90 bp | GCCTTTGTCCCCTCTGCAGAGGCTCTGGTCTGGTCTCTGGGCATAGCTTATCTTCTGAGTTTAACAAATTaGGCTTCAATTGAAGCCTCA | + |
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Preference number: 2 (lower is better) Translates to: AFVPSAEALVWSLGIAYLLSLTN*ASIEAS Trigger: TGAGGCTTCAATTGAAGCCCAATTTGTTAAACTCAG...AAGATAAGCTATGCCCAGAGACCAGACCAGAGCCTCTGCAGAGGGGACAAAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
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| 3UTR-3UTR GCA 90 bp | ATTCAGATTCTTAAGCTTACAAGGCCTTGCCAACCGGGCAATTCTGCAGCCCAATCCTTTGGAAGAGATTaGCATCAAACTGGAAAGGGG | + |
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Preference number: 2 (lower is better) Translates to: IQILKLTRPCQPGNSAAQSFGRD*HQTGKG Trigger: CCCCTTTCCAGTTTGATGGCAATCTCTTCCAAAGGA...TTGGGCTGCAGAATTGCCCGGTTGGCAAGGCCTTGTAAGCTTAAGAATCTGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
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| 3UTR-3UTR CCA 90 bp | ATTCAGATTCTTAAGCTTACAAGGCCTTGCCAACCGGGCAATTCTGCAGCCCAAACTCAAAACCTGCCATaGCTGATAGTACTATCTACC | + |
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Preference number: 2 (lower is better) Translates to: IQILKLTRPCQPGNSAAQTQNLP*LIVLST Trigger: GGTAGATAGTACTATCAGCCATGGCAGGTTTTGAGT...TTGGGCTGCAGAATTGCCCGGTTGGCAAGGCCTTGTAAGCTTAAGAATCTGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
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| 3UTR CAA 90 bp | GGTTCATGGAAAGAGATGCTATCAGGAGTGTTTGTAGCCTGGTGTTaGCTATGTTGCTCAGTGTTTGTTGACACTAAACTGCTGGTGTCT | + |
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Preference number: 2 (lower is better) Translates to: GSWKEMLSGVFVAWC*LCCSVFVDTKLLVS Trigger: AGACACCAGCAGTTTAGTGTCAACAAACACTGAGCAACATAGCAAACACCAGGCTACAAACACTCCTGATAGCATCTCTTTCCATGAACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
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| 3UTR-3UTR CCA 90 bp | GGCAATTCTGCAGCCCAATTCAGTGGGCTTAGAAGAAAGAAGTTTCCTTTGGAATTGCAGTGCGGTTCATaGAAAGAGATGCTATCAGGA | + |
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Preference number: 2 (lower is better) Translates to: GNSAAQFSGLRRKKFPLELQCGS*KEMLSG Trigger: TCCTGATAGCATCTCTTTCCATGAACCGCACTGCAA...TTCCAAAGGAAACTTCTTTCTTCTAAGCCCACTGAATTGGGCTGCAGAATTGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
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| 3UTR-3UTR TCA 90 bp | CATCTGCTTGGGAGATGCACTTCACTTCATTTCTTATACTTTCACATGGTGATGGTAATCTGCCTGTCTTaGCTCCTTAGTGCTGGGATT | + |
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Preference number: 2 (lower is better) Translates to: HLLGRCTSLHFLYFHMVMVICLS*LLSAGI Trigger: AATCCCAGCACTAAGGAGTCAAGACAGGCAGATTAC...CATCACCATGTGAAAGTATAAGAAATGAAGTGAAGTGCATCTCCCAAGCAGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
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| 3UTR-3UTR CCA 90 bp | ATTCAGATTCTTAAGCTTACAAGGCCTTGCCAACCGGGCAATTCTGCAGCCCAAGAAAGAAGTTTCCTTTaGAAGAGATTGCCATCAAAC | + |
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Preference number: 2 (lower is better) Translates to: IQILKLTRPCQPGNSAAQERSFL*KRLPSN Trigger: GTTTGATGGCAATCTCTTCCAAAGGAAACTTCTTTC...TTGGGCTGCAGAATTGCCCGGTTGGCAAGGCCTTGTAAGCTTAAGAATCTGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
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| 3UTR-3UTR TCA 90 bp | ACTTCGTCAAGAGTGGACTATTCATTAATAAGCATATTGCATGGGGAGGTCATGCTTTCAAAGAGGCAGTaGTGGAGAAAACTGTCATGT | + |
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Preference number: 2 (lower is better) Translates to: TSSRVDYSLISILHGEVMLSKRQ*WRKLSC Trigger: ACATGACAGTTTTCTCCATCACTGCCTCTTTGAAAG...CATGACCTCCCCATGCAATATGCTTATTAATGAATAGTCCACTCTTGACGAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
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| 3UTR-3UTR TCA 90 bp | GAATACCATGTGGAGACTGATGAATTTGGGGAAACAATGATAAGAACATCCTGTCTTTCAAAGAGGCAGTaGTGGAGAAAACTGTCATGT | + |
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Preference number: 2 (lower is better) Translates to: EYHVETDEFGETMIRTSCLSKRQ*WRKLSC Trigger: ACATGACAGTTTTCTCCATCACTGCCTCTTTGAAAG...ACAGGATGTTCTTATCATTGTTTCCCCAAATTCATCAGTCTCCACATGGTATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045902.13 ENSMUST00000111510.8 |
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| 3UTR-3UTR CCA 90 bp | CACAGGGGTCACATATCAGCTATTTGCACAACAATTCATAAGAGTAGCAAAATTACTATCTACCTGTGCTaGTGTTATTATAGAATACCA | + |
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Preference number: 2 (lower is better) Translates to: HRGHISAICTTIHKSSKITIYLC*CYYRIP Trigger: TGGTATTCTATAATAACACCAGCACAGGTAGATAGT...AATTTTGCTACTCTTATGAATTGTTGTGCAAATAGCTGATATGTGACCCCTGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
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| 3UTR-3UTR CAA 90 bp | GCCTTTGTCCCCTCTGCAGAGGCTCTGGTCTGGTCTCTGGGCATAGCTTATCTTCAAATTGGGCTTCAATaGAAGCCTCATCTCAAGACC | + |
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Preference number: 3 (lower is better) Translates to: AFVPSAEALVWSLGIAYLQIGLQ*KPHLKT Trigger: GGTCTTGAGATGAGGCTTCAATTGAAGCCCAATTTG...AAGATAAGCTATGCCCAGAGACCAGACCAGAGCCTCTGCAGAGGGGACAAAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
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| 3UTR GCA 72 bp | TACTTAAACCTTCAGTATCCTGGCCTTTGTCCCCTCTaGAGAGGCTCTGGTCTGGTCTCTGGGCATAGCTTA | + |
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Preference number: 3 (lower is better) Translates to: YLNLQYPGLCPL*RGSGLVSGHSL Trigger: TAAGCTATGCCCAGAGACCAGACCAGAGCCTCTGCAGAGGGGACAAAGGCCAGGATACTGAAGGTTTAAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
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| 3UTR-3UTR CAA 90 bp | GCCTTTGTCCCCTCTGCAGAGGCTCTGGTCTGGTCTCTGGGCATAGCTTATCTTTTTGTAGCCTGGTGTTaGCTATGTTGCTCAGTGTTT | + |
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Preference number: 3 (lower is better) Translates to: AFVPSAEALVWSLGIAYLFVAWC*LCCSVF Trigger: AAACACTGAGCAACATAGCAAACACCAGGCTACAAA...AAGATAAGCTATGCCCAGAGACCAGACCAGAGCCTCTGCAGAGGGGACAAAGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
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| 3UTR-3UTR CAA 90 bp | GAACTCATTAAAACAGAGGAGGCTGGCCAGCGATACCCAGGATACTGTTTTCATTGGCTGGCCCAGATTTaGCTATGTAGAGCAACCCAG | + |
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Preference number: 3 (lower is better) Translates to: ELIKTEEAGQRYPGYCFHWLAQI*LCRATQ Trigger: CTGGGTTGCTCTACATAGCAAAATCTGGGCCAGCCA...ATGAAAACAGTATCCTGGGTATCGCTGGCCAGCCTCCTCTGTTTTAATGAGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
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| 3UTR CCA 72 bp | TGTTCACAAAGCTTTGAAGCAGTAGTTCTCAACCAGTaGGTCAAGACCCCCACAGGGGTCACATATCAGCTA | + |
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Preference number: 3 (lower is better) Translates to: CSQSFEAVVLNQ*VKTPTGVTYQL Trigger: TAGCTGATATGTGACCCCTGTGGGGGTCTTGACCCACTGGTTGAGAACTACTGCTTCAAAGCTTTGTGAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
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| 3UTR TCA 72 bp | GGAAACATATACAAACATGAGTACATAGGCCAGAGGTaGGACTCTGGTATTGCTCCTCAGGATTCGCCCACT | + |
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Preference number: 3 (lower is better) Translates to: GNIYKHEYIGQR*DSGIAPQDSPT Trigger: AGTGGGCGAATCCTGAGGAGCAATACCAGAGTCTCACCTCTGGCCTATGTACTCATGTTTGTATATGTTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
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| 3UTR GCA 72 bp | CTGGTCTGGTCTCTGGGCATAGCTTATCTTTTGCAGTaGGGTTCATGGAAAGAGATGCTATCAGGAGTGTTT | + |
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Preference number: 3 (lower is better) Translates to: LVWSLGIAYLLQ*GSWKEMLSGVF Trigger: AAACACTCCTGATAGCATCTCTTTCCATGAACCGCACTGCAAAAGATAAGCTATGCCCAGAGACCAGACCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
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| 3UTR GCA 72 bp | CTATCAGGAGTGTTTGTAGCCTGGTGTTTGCTATGTTaGTCAGTGTTTGTTGACACTAAACTGCTGGTGTCT | + |
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Preference number: 3 (lower is better) Translates to: LSGVFVAWCLLC*SVFVDTKLLVS Trigger: AGACACCAGCAGTTTAGTGTCAACAAACACTGAGCAACATAGCAAACACCAGGCTACAAACACTCCTGATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
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| 3UTR CCA 72 bp | CTCTATAATGTCCCCTCCTCAGTGCCATCTGTAGAATaGGTGATATATATAGCTCTACCCATCACACAGTTG | + |
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Preference number: 3 (lower is better) Translates to: LYNVPSSVPSVE*VIYIALPITQL Trigger: CAACTGTGTGATGGGTAGAGCTATATATATCACCCATTCTACAGATGGCACTGAGGAGGGGACATTATAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
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| 3UTR GCA 72 bp | ATTTTTGCATCAGAAGTGGGAACTGTGACCAGAGTATaGATAGGAACAGCACTGAGCATCATAGTGTACAAG | + |
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Preference number: 3 (lower is better) Translates to: IFASEVGTVTRV*IGTALSIIVYK Trigger: CTTGTACACTATGATGCTCAGTGCTGTTCCTATGCATACTCTGGTCACAGTTCCCACTTCTGATGCAAAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
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| 3UTR CCA 72 bp | GGAGGTCATGAGCATAAGTTTCTGAGTTTAACAAATTaGGCTTCAATTGAAGCCTCATCTCAAGACCAGCTG | + |
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Preference number: 3 (lower is better) Translates to: GGHEHKFLSLTN*ASIEASSQDQL Trigger: CAGCTGGTCTTGAGATGAGGCTTCAATTGAAGCCCAATTTGTTAAACTCAGAAACTTATGCTCATGACCTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
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| 3UTR GCA 72 bp | ACCTCAGCCATTGTAGAGTTTCATCTGCTTGGGAGATaGACTTCACTTCATTTCTTATACTTTCACATGGTG | + |
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Preference number: 3 (lower is better) Translates to: TSAIVEFHLLGR*TSLHFLYFHMV Trigger: CACCATGTGAAAGTATAAGAAATGAAGTGAAGTGCATCTCCCAAGCAGATGAAACTCTACAATGGCTGAGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
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| 3UTR TCA 72 bp | CCTGCCCCTTATCAGATGACAAAGACAGGACATTGCTaGGATTTGCTTTTCTTACCTATAATGTTAACCCTA | + |
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Preference number: 3 (lower is better) Translates to: PAPYQMTKTGHC*DLLFLPIMLTL Trigger: TAGGGTTAACATTATAGGTAAGAAAAGCAAATCTCAGCAATGTCCTGTCTTTGTCATCTGATAAGGGGCAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
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| 3UTR-3UTR CAA 90 bp | CACAGGGGTCACATATCAGCTATTTGCACAACAATTCATAAGAGTAGCAAAATTTCATTAATAAGCATATaGCATGGGGAGGTCATGAGC | + |
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Preference number: 3 (lower is better) Translates to: HRGHISAICTTIHKSSKISLISI*HGEVMS Trigger: GCTCATGACCTCCCCATGCAATATGCTTATTAATGA...AATTTTGCTACTCTTATGAATTGTTGTGCAAATAGCTGATATGTGACCCCTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
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| 3UTR CCA 72 bp | GTCAAGAGTGGACTATTCATTAATAAGCATATTGCATaGGGAGGTCATGAGCATAAGTTTCTGAGTTTAACA | + |
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Preference number: 3 (lower is better) Translates to: VKSGLFINKHIA*GGHEHKFLSLT Trigger: TGTTAAACTCAGAAACTTATGCTCATGACCTCCCCATGCAATATGCTTATTAATGAATAGTCCACTCTTGAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
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| CDS-3UTR GCA 90 bp | GCCTTTGTCCCCTCTGCAGAGGCTCTGGTCTGGTCTCTGGGCATAGCTTATCTTCTGGCTCCTTCCCACTaGCCAGGTCCAACCAGGCGG | + |
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Preference number: 4 (lower is better) Translates to: AFVPSAEALVWSLGIAYLLAPSH*PGPTRR Trigger: CCGCCTGGTTGGACCTGGGCAGTGGGAAGGAGCCAG...AAGATAAGCTATGCCCAGAGACCAGACCAGAGCCTCTGCAGAGGGGACAAAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
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| CDS-3UTR GCA 90 bp | GTTTTCATCTCCCTCCCCAATGCTGGGATTAGAAGTGTGTGCAGCCACACCGGGGGTTTCAGGATCCTCTaGTTCTGGGTGAGGATGGCG | + |
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Preference number: 4 (lower is better) Translates to: VFISLPNAGIRSVCSHTGGFRIL*FWVRMA Trigger: CGCCATCCTCACCCAGAAGCAGAGGATCCTGAAACC...CCCGGTGTGGCTGCACACACTTCTAATCCCAGCATTGGGGAGGGAGATGAAAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
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| CDS-3UTR CCA 90 bp | GTTTTCATCTCCCTCCCCAATGCTGGGATTAGAAGTGTGTGCAGCCACACCGGGGGTGAGGGGGAAACATaGCTTTGTACAGGGAAACCC | + |
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Preference number: 4 (lower is better) Translates to: VFISLPNAGIRSVCSHTGGEGET*LCTGKP Trigger: GGGTTTCCCTGTACAAAGCCATGTTTCCCCCTCACC...CCCGGTGTGGCTGCACACACTTCTAATCCCAGCATTGGGGAGGGAGATGAAAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
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| CDS-3UTR TCA 90 bp | GCCTTTGTCCCCTCTGCAGAGGCTCTGGTCTGGTCTCTGGGCATAGCTTATCTTCTTCCACGTTTTCTTTaGATCTCCACAGTCCCCCTA | + |
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Preference number: 4 (lower is better) Translates to: AFVPSAEALVWSLGIAYLLPRFL*ISTVPL Trigger: TAGGGGGACTGTGGAGATTCAAAGAAAACGTGGAAG...AAGATAAGCTATGCCCAGAGACCAGACCAGAGCCTCTGCAGAGGGGACAAAGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
||
| CDS-3UTR TCA 90 bp | ATTCAGATTCTTAAGCTTACAAGGCCTTGCCAACCGGGCAATTCTGCAGCCCAAGAGAGATTAGGCCACTaGCCCCTGCTCCAATCACCA | + |
|
Preference number: 4 (lower is better) Translates to: IQILKLTRPCQPGNSAAQERLGH*PLLQSP Trigger: TGGTGATTGGAGCAGGGGTCAGTGGCCTAATCTCTC...TTGGGCTGCAGAATTGCCCGGTTGGCAAGGCCTTGTAAGCTTAAGAATCTGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
||
| CDS-3UTR TCA 90 bp | GGCAATTCTGCAGCCCAATTCAGTGGGCTTAGAAGAAAGAAGTTTCCTTTGGAAGCAGCCCCAGGATCTTaGGCAGGAAAGACACTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GNSAAQFSGLRRKKFPLEAAPGS*AGKTLG Trigger: CCCCAGTGTCTTTCCTGCTCAAGATCCTGGGGCTGC...TTCCAAAGGAAACTTCTTTCTTCTAAGCCCACTGAATTGGGCTGCAGAATTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
||
| CDS-3UTR CCA 90 bp | ATTCAGATTCTTAAGCTTACAAGGCCTTGCCAACCGGGCAATTCTGCAGCCCAAAGTTGTGCAGGAAGTTaGGGAAGTCCTCCGGCATCG | + |
|
Preference number: 4 (lower is better) Translates to: IQILKLTRPCQPGNSAAQSCAGS*GSPPAS Trigger: CGATGCCGGAGGACTTCCCCAACTTCCTGCACAACT...TTGGGCTGCAGAATTGCCCGGTTGGCAAGGCCTTGTAAGCTTAAGAATCTGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
||
| CDS-3UTR GCA 90 bp | ATTATAATGAGGATGGAATTTCTCCAGTTTCCCTTTCAAAGAGGCAGTGATGGACTGGCTCCTTCCCACTaGCCAGGTCCAACCAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: IIMRMEFLQFPFQRGSDGLAPSH*PGPTRR Trigger: CCGCCTGGTTGGACCTGGGCAGTGGGAAGGAGCCAG...TCCATCACTGCCTCTTTGAAAGGGAAACTGGAGAAATTCCATCCTCATTATAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045902.13 ENSMUST00000111510.8 |
||
| 3UTR CAA 72 bp | GAGGCTCTGGTCTGGTCTCTGGGCATAGCTTATCTTTaGCAGTGCGGTTCATGGAAAGAGATGCTATCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: EALVWSLGIAYL*QCGSWKEMLSG Trigger: TCCTGATAGCATCTCTTTCCATGAACCGCACTGCAAAAGATAAGCTATGCCCAGAGACCAGACCAGAGCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
||
| CDS-3UTR TCA 90 bp | GGCAATTCTGCAGCCCAATTCAGTGGGCTTAGAAGAAAGAAGTTTCCTTTGGAATACCTGGGAATGACTTaGGTGGCAGGTGAGGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GNSAAQFSGLRRKKFPLEYLGMT*VAGEAG Trigger: TCCAGCCTCACCTGCCACTCAAGTCATTCCCAGGTA...TTCCAAAGGAAACTTCTTTCTTCTAAGCCCACTGAATTGGGCTGCAGAATTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
||
| CDS-3UTR TCA 90 bp | GTGTGTGTTCAAGTGCGTGCAGTTGCAGGGTTATGTGGAAACATATACAAACATCCACAGCTGTCTCCGTaGGCTCCTTCACCCGTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VCVQVRAVAGLCGNIYKHPQLSP*APSPVF Trigger: AAACACGGGTGAAGGAGCTCACGGAGACAGCTGTGG...ATGTTTGTATATGTTTCCACATAACCCTGCAACTGCACGCACTTGAACACACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
||
| CDS-3UTR TCA 90 bp | GGCAATTCTGCAGCCCAATTCAGTGGGCTTAGAAGAAAGAAGTTTCCTTTGGAACTCAATACCTGGGAATaGCTTGAGTGGCAGGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GNSAAQFSGLRRKKFPLELNTWE*LEWQVR Trigger: CCTCACCTGCCACTCAAGTCATTCCCAGGTATTGAG...TTCCAAAGGAAACTTCTTTCTTCTAAGCCCACTGAATTGGGCTGCAGAATTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
||
| CDS-3UTR TCA 90 bp | GAATACCATGTGGAGACTGATGAATTTGGGGAAACAATGATAAGAACATCCTGTGCAGCCCCAGGATCTTaGGCAGGAAAGACACTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: EYHVETDEFGETMIRTSCAAPGS*AGKTLG Trigger: CCCCAGTGTCTTTCCTGCTCAAGATCCTGGGGCTGC...ACAGGATGTTCTTATCATTGTTTCCCCAAATTCATCAGTCTCCACATGGTATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045902.13 ENSMUST00000111510.8 |
||
| CDS-3UTR CCA 90 bp | TATTTTTCTTTTGAGACAGGTTGTCACCATGTAGCCCTGGCTGGCCCAGATTTTGAGCAGGAAAGACACTaGGGCACTATCAGAGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: YFSFETGCHHVALAGPDFEQERH*GTIRGL Trigger: CAGTCCTCTGATAGTGCCCCAGTGTCTTTCCTGCTC...AAAATCTGGGCCAGCCAGGGCTACATGGTGACAACCTGTCTCAAAAGAAAAATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
||
| CDS-3UTR TCA 90 bp | ATTATAATGAGGATGGAATTTCTCCAGTTTCCCTTTCAAAGAGGCAGTGATGGACCACAGCTGTCTCCGTaGGCTCCTTCACCCGTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: IIMRMEFLQFPFQRGSDGPQLSP*APSPVF Trigger: AAACACGGGTGAAGGAGCTCACGGAGACAGCTGTGG...TCCATCACTGCCTCTTTGAAAGGGAAACTGGAGAAATTCCATCCTCATTATAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045902.13 ENSMUST00000111510.8 |
||
| CDS-3UTR GCA 90 bp | CATTTTTGCATCAGAAGTGGGAACTGTGACCAGAGTATGCATAGGAACAGCACTGACGAAATCTGGCTTTaGACCTATCTCCAAGGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: HFCIRSGNCDQSMHRNSTDEIWL*TYLQGE Trigger: CTCGCCTTGGAGATAGGTGCAAAGCCAGATTTCGTC...AGTGCTGTTCCTATGCATACTCTGGTCACAGTTCCCACTTCTGATGCAAAAATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
||
| CDS-3UTR CCA 90 bp | GGAAGTACTTCGTCAAGAGTGGACTATTCATTAATAAGCATATTGCATGGGGAGAGGATCCTCTGCTTCTaGGTGAGGATGGCGTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GSTSSRVDYSLISILHGERILCF*VRMAFL Trigger: CAGGAACGCCATCCTCACCCAGAAGCAGAGGATCCT...CTCCCCATGCAATATGCTTATTAATGAATAGTCCACTCTTGACGAAGTACTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
||
| CDS-3UTR CCA 90 bp | TATTTTTCTTTTGAGACAGGTTGTCACCATGTAGCCCTGGCTGGCCCAGATTTTGCACTATCAGAGGACTaGAGAGTCCGGGTCTTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: YFSFETGCHHVALAGPDFALSED*RVRVFK Trigger: CTTAAAGACCCGGACTCTCCAGTCCTCTGATAGTGC...AAAATCTGGGCCAGCCAGGGCTACATGGTGACAACCTGTCTCAAAAGAAAAATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
||
| CDS-3UTR TCA 90 bp | ATTATAATGAGGATGGAATTTCTCCAGTTTCCCTTTCAAAGAGGCAGTGATGGAGAGAGATTAGGCCACTaGCCCCTGCTCCAATCACCA | + |
|
Preference number: 4 (lower is better) Translates to: IIMRMEFLQFPFQRGSDGERLGH*PLLQSP Trigger: TGGTGATTGGAGCAGGGGTCAGTGGCCTAATCTCTC...TCCATCACTGCCTCTTTGAAAGGGAAACTGGAGAAATTCCATCCTCATTATAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045902.13 ENSMUST00000111510.8 |
||
| CDS-3UTR GCA 90 bp | GGAAGTACTTCGTCAAGAGTGGACTATTCATTAATAAGCATATTGCATGGGGAGCAGCGTCAAAGACAGTaGGTTGCTCCTTTCCGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GSTSSRVDYSLISILHGEQRQRQ*VAPFRC Trigger: GCAACGGAAAGGAGCAACGCACTGTCTTTGACGCTG...CTCCCCATGCAATATGCTTATTAATGAATAGTCCACTCTTGACGAAGTACTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
||
| CDS-3UTR GCA 90 bp | GAATACCATGTGGAGACTGATGAATTTGGGGAAACAATGATAAGAACATCCTGTGGTTTCAGGATCCTCTaGTTCTGGGTGAGGATGGCG | + |
|
Preference number: 4 (lower is better) Translates to: EYHVETDEFGETMIRTSCGFRIL*FWVRMA Trigger: CGCCATCCTCACCCAGAAGCAGAGGATCCTGAAACC...ACAGGATGTTCTTATCATTGTTTCCCCAAATTCATCAGTCTCCACATGGTATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045902.13 ENSMUST00000111510.8 |
||
| CDS-3UTR CCA 90 bp | GAATACCATGTGGAGACTGATGAATTTGGGGAAACAATGATAAGAACATCCTGTAGTTGTGCAGGAAGTTaGGGAAGTCCTCCGGCATCG | + |
|
Preference number: 4 (lower is better) Translates to: EYHVETDEFGETMIRTSCSCAGS*GSPPAS Trigger: CGATGCCGGAGGACTTCCCCAACTTCCTGCACAACT...ACAGGATGTTCTTATCATTGTTTCCCCAAATTCATCAGTCTCCACATGGTATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045902.13 ENSMUST00000111510.8 |
||
| CDS-3UTR CCA 90 bp | GAATACCATGTGGAGACTGATGAATTTGGGGAAACAATGATAAGAACATCCTGTAGGATCCTCTGCTTCTaGGTGAGGATGGCGTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: EYHVETDEFGETMIRTSCRILCF*VRMAFL Trigger: CAGGAACGCCATCCTCACCCAGAAGCAGAGGATCCT...ACAGGATGTTCTTATCATTGTTTCCCCAAATTCATCAGTCTCCACATGGTATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045902.13 ENSMUST00000111510.8 |
||
| CDS-3UTR TCA 90 bp | ATTATAATGAGGATGGAATTTCTCCAGTTTCCCTTTCAAAGAGGCAGTGATGGACTCAATACCTGGGAATaGCTTGAGTGGCAGGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: IIMRMEFLQFPFQRGSDGLNTWE*LEWQVR Trigger: CCTCACCTGCCACTCAAGTCATTCCCAGGTATTGAG...TCCATCACTGCCTCTTTGAAAGGGAAACTGGAGAAATTCCATCCTCATTATAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045902.13 ENSMUST00000111510.8 |
||
| CDS-3UTR GCA 90 bp | GAATACCATGTGGAGACTGATGAATTTGGGGAAACAATGATAAGAACATCCTGTCAGCGTCAAAGACAGTaGGTTGCTCCTTTCCGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: EYHVETDEFGETMIRTSCQRQRQ*VAPFRC Trigger: GCAACGGAAAGGAGCAACGCACTGTCTTTGACGCTG...ACAGGATGTTCTTATCATTGTTTCCCCAAATTCATCAGTCTCCACATGGTATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045902.13 ENSMUST00000111510.8 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGTTCAAGTGCGTGCAGTTGCAGGGTTATGTGGAAACATATACAAACATCGGCTATGGAAATACTaGCCTCGGAACCTCTCAATA | + |
|
Preference number: 4 (lower is better) Translates to: VCVQVRAVAGLCGNIYKHRLWKY*PRNLSI Trigger: TATTGAGAGGTTCCGAGGCCAGTATTTCCATAGCCG...ATGTTTGTATATGTTTCCACATAACCCTGCAACTGCACGCACTTGAACACACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
||
| CDS-3UTR CCA 90 bp | ATTATAATGAGGATGGAATTTCTCCAGTTTCCCTTTCAAAGAGGCAGTGATGGAGAGCAGGAAAGACACTaGGGCACTATCAGAGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: IIMRMEFLQFPFQRGSDGEQERH*GTIRGL Trigger: CAGTCCTCTGATAGTGCCCCAGTGTCTTTCCTGCTC...TCCATCACTGCCTCTTTGAAAGGGAAACTGGAGAAATTCCATCCTCATTATAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045902.13 ENSMUST00000111510.8 |
||
| CDS-3UTR TCA 90 bp | GGAAGTACTTCGTCAAGAGTGGACTATTCATTAATAAGCATATTGCATGGGGAGGGCAATATCTGCAGCTaGGTTTCCTATTCCAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: GSTSSRVDYSLISILHGEGNICS*VSYSNH Trigger: GTGGTTGGAATAGGAAACTCAGCTGCAGATATTGCC...CTCCCCATGCAATATGCTTATTAATGAATAGTCCACTCTTGACGAAGTACTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
||
| CDS-3UTR TCA 90 bp | GAACTCATTAAAACAGAGGAGGCTGGCCAGCGATACCCAGGATACTGTTTTCATCTCCACTTTAACAAGTaGGTCTTCCAGGAAAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: ELIKTEEAGQRYPGYCFHLHFNK*VFQERK Trigger: TTTTCTTTCCTGGAAGACTCACTTGTTAAAGTGGAG...ATGAAAACAGTATCCTGGGTATCGCTGGCCAGCCTCCTCTGTTTTAATGAGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
||
| CDS-3UTR TCA 90 bp | GAATACCATGTGGAGACTGATGAATTTGGGGAAACAATGATAAGAACATCCTGTAGCTACACAAGCCTTTaGAAACTCTTGTCGCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: EYHVETDEFGETMIRTSCSYTSL*KLLSPS Trigger: GCTGGGCGACAAGAGTTTTCAAAGGCTTGTGTAGCT...ACAGGATGTTCTTATCATTGTTTCCCCAAATTCATCAGTCTCCACATGGTATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045902.13 ENSMUST00000111510.8 |
||
| CDS-3UTR TCA 90 bp | ATTATAATGAGGATGGAATTTCTCCAGTTTCCCTTTCAAAGAGGCAGTGATGGAAGCTACACAAGCCTTTaGAAACTCTTGTCGCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: IIMRMEFLQFPFQRGSDGSYTSL*KLLSPS Trigger: GCTGGGCGACAAGAGTTTTCAAAGGCTTGTGTAGCT...TCCATCACTGCCTCTTTGAAAGGGAAACTGGAGAAATTCCATCCTCATTATAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045902.13 ENSMUST00000111510.8 |
||
| CDS-3UTR CCA 90 bp | ATTATAATGAGGATGGAATTTCTCCAGTTTCCCTTTCAAAGAGGCAGTGATGGAGCACTATCAGAGGACTaGAGAGTCCGGGTCTTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: IIMRMEFLQFPFQRGSDGALSED*RVRVFK Trigger: CTTAAAGACCCGGACTCTCCAGTCCTCTGATAGTGC...TCCATCACTGCCTCTTTGAAAGGGAAACTGGAGAAATTCCATCCTCATTATAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045902.13 ENSMUST00000111510.8 |
||
| CDS-3UTR TCA 90 bp | GAATACCATGTGGAGACTGATGAATTTGGGGAAACAATGATAAGAACATCCTGTCTTCCACGTTTTCTTTaGATCTCCACAGTCCCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: EYHVETDEFGETMIRTSCLPRFL*ISTVPL Trigger: TAGGGGGACTGTGGAGATTCAAAGAAAACGTGGAAG...ACAGGATGTTCTTATCATTGTTTCCCCAAATTCATCAGTCTCCACATGGTATTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000045902.13 ENSMUST00000111510.8 |
||
| CDS-3UTR TCA 90 bp | GAATACCATGTGGAGACTGATGAATTTGGGGAAACAATGATAAGAACATCCTGTGGCAATATCTGCAGCTaGGTTTCCTATTCCAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: EYHVETDEFGETMIRTSCGNICS*VSYSNH Trigger: GTGGTTGGAATAGGAAACTCAGCTGCAGATATTGCC...ACAGGATGTTCTTATCATTGTTTCCCCAAATTCATCAGTCTCCACATGGTATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045902.13 ENSMUST00000111510.8 |
||
| CDS-3UTR CCA 90 bp | GAATACCATGTGGAGACTGATGAATTTGGGGAAACAATGATAAGAACATCCTGTCGGCTATGGAAATACTaGCCTCGGAACCTCTCAATA | + |
|
Preference number: 4 (lower is better) Translates to: EYHVETDEFGETMIRTSCRLWKY*PRNLSI Trigger: TATTGAGAGGTTCCGAGGCCAGTATTTCCATAGCCG...ACAGGATGTTCTTATCATTGTTTCCCCAAATTCATCAGTCTCCACATGGTATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045902.13 ENSMUST00000111510.8 |
||
| CDS-3UTR GCA 90 bp | GAATACCATGTGGAGACTGATGAATTTGGGGAAACAATGATAAGAACATCCTGTTCTTTCAACAATGTCTaGCATCATAGTCGTCTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: EYHVETDEFGETMIRTSCSFNNV*HHSRLR Trigger: TCGGAGACGACTATGATGGCAGACATTGTTGAAAGA...ACAGGATGTTCTTATCATTGTTTCCCCAAATTCATCAGTCTCCACATGGTATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045902.13 ENSMUST00000111510.8 |
||
| CDS-3UTR TCA 90 bp | ATTATAATGAGGATGGAATTTCTCCAGTTTCCCTTTCAAAGAGGCAGTGATGGACTCCACTTTAACAAGTaGGTCTTCCAGGAAAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: IIMRMEFLQFPFQRGSDGLHFNK*VFQERK Trigger: TTTTCTTTCCTGGAAGACTCACTTGTTAAAGTGGAG...TCCATCACTGCCTCTTTGAAAGGGAAACTGGAGAAATTCCATCCTCATTATAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045902.13 ENSMUST00000111510.8 |
||
| CDS-3UTR GCA 90 bp | CACAGGGGTCACATATCAGCTATTTGCACAACAATTCATAAGAGTAGCAAAATTTCTTTCAACAATGTCTaGCATCATAGTCGTCTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: HRGHISAICTTIHKSSKISFNNV*HHSRLR Trigger: TCGGAGACGACTATGATGGCAGACATTGTTGAAAGA...AATTTTGCTACTCTTATGAATTGTTGTGCAAATAGCTGATATGTGACCCCTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
||
| CDS TCA 90 bp | GCGCCTGAAGCTCTACGGTTGGGAAGATGGAGCCTAGAGGCTGGATaGGACCTATGCACGCAAGGGTTGGCTTCTCCAGGTGAGGGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: APEALRLGRWSLEAG*DLCTQGLASPGEGE Trigger: TTCCCCCTCACCTGGAGAAGCCAACCCTTGCGTGCATAGGTCTCATCCAGCCTCTAGGCTCCATCTTCCCAACCGTAGAGCTTCAGGCGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045902.13 ENSMUST00000111510.8 |
||
| CDS TCA 90 bp | GCGGCTATGGAAATACTGGCCTCGGAACCTCTCAATACCTGGGAATaGCTTGAGTGGCAGGTGAGGCTGGATGTGATGGCCGCTGCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: AAMEILASEPLNTWE*LEWQVRLDVMAAAN Trigger: GTTTGCAGCGGCCATCACATCCAGCCTCACCTGCCACTCAAGTCATTCCCAGGTATTGAGAGGTTCCGAGGCCAGTATTTCCATAGCCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045902.13 ENSMUST00000111510.8 |
||
| CDS TCA 90 bp | GGCAAGCTACACAAGCCTTTGAAAACTCTTGTCGCCCAGCGCGCCTaGAGCTCTACGGTTGGGAAGATGGAGCCTAGAGGCTGGATGAGA | + |
|
Preference number: 5 (lower is better) Translates to: GKLHKPLKTLVAQRA*SSTVGKMEPRGWMR Trigger: TCTCATCCAGCCTCTAGGCTCCATCTTCCCAACCGTAGAGCTTCAGGCGCGCTGGGCGACAAGAGTTTTCAAAGGCTTGTGTAGCTTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045902.13 ENSMUST00000111510.8 |
||
| CDS TCA 90 bp | CACCTGCGCGGCCGTCTTACTCAGTTCAGAGGCAATATCTGCAGCTaGGTTTCCTATTCCAACCACCAGGATGCGTTTCCCCTCAAACCC | + |
|
Preference number: 5 (lower is better) Translates to: HLRGRLTQFRGNICS*VSYSNHQDAFPLKP Trigger: GGGTTTGAGGGGAAACGCATCCTGGTGGTTGGAATAGGAAACTCAGCTGCAGATATTGCCTCTGAACTGAGTAAGACGGCCGCGCAGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045902.13 ENSMUST00000111510.8 |
||
| CDS GCA 90 bp | CCTATTCCAACCACCAGGATGCGTTTCCCCTCAAACCCCACTGGGTaGTTGTATTCGCGGCTATGGAAATACTGGCCTCGGAACCTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PIPTTRMRFPSNPTG*LYSRLWKYWPRNLS Trigger: TGAGAGGTTCCGAGGCCAGTATTTCCATAGCCGCGAATACAAGCACCCAGTGGGGTTTGAGGGGAAACGCATCCTGGTGGTTGGAATAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045902.13 ENSMUST00000111510.8 |
||
| CDS CCA 90 bp | CCCAGGATCTTGAGCAGGAAAGACACTGGGGCACTATCAGAGGACTaGAGAGTCCGGGTCTTTAAGGGTTTCAGGATCCTCTGCTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PRILSRKDTGALSED*RVRVFKGFRILCFW Trigger: CCAGAAGCAGAGGATCCTGAAACCCTTAAAGACCCGGACTCTCCAGTCCTCTGATAGTGCCCCAGTGTCTTTCCTGCTCAAGATCCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045902.13 ENSMUST00000111510.8 |
||
| CDS CCA 90 bp | GTTTCCTATTCCAACCACCAGGATGCGTTTCCCCTCAAACCCCACTaGGTGCTTGTATTCGCGGCTATGGAAATACTGGCCTCGGAACCT | + |
|
Preference number: 5 (lower is better) Translates to: VSYSNHQDAFPLKPH*VLVFAAMEILASEP Trigger: AGGTTCCGAGGCCAGTATTTCCATAGCCGCGAATACAAGCACCCAGTGGGGTTTGAGGGGAAACGCATCCTGGTGGTTGGAATAGGAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045902.13 ENSMUST00000111510.8 |
||
| CDS-3UTR CAA 90 bp | GCCTTTGTCCCCTCTGCAGAGGCTCTGGTCTGGTCTCTGGGCATAGCTTATCTTAAGCTACACAAGCCTTaGAAAACTCTTGTCGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: AFVPSAEALVWSLGIAYLKLHKP*KTLVAQ Trigger: CTGGGCGACAAGAGTTTTCAAAGGCTTGTGTAGCTT...AAGATAAGCTATGCCCAGAGACCAGACCAGAGCCTCTGCAGAGGGGACAAAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
||
| CDS-3UTR CAA 90 bp | GTTTTCATCTCCCTCCCCAATGCTGGGATTAGAAGTGTGTGCAGCCACACCGGGAGTATAAACTTCCCATaGCCCAGAAGATGCGAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: VFISLPNAGIRSVCSHTGSINFP*PRRCEV Trigger: GACTTCGCATCTTCTGGGCAATGGGAAGTTTATACT...CCCGGTGTGGCTGCACACACTTCTAATCCCAGCATTGGGGAGGGAGATGAAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
||
| CDS-3UTR CAA 90 bp | TATTTTTCTTTTGAGACAGGTTGTCACCATGTAGCCCTGGCTGGCCCAGATTTTCCTGAAGCTCTACGGTaGGGAAGATGGAGCCTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: YFSFETGCHHVALAGPDFPEALR*GRWSLE Trigger: CTCTAGGCTCCATCTTCCCAACCGTAGAGCTTCAGG...AAAATCTGGGCCAGCCAGGGCTACATGGTGACAACCTGTCTCAAAAGAAAAATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
||
| CDS-3UTR CAA 90 bp | GAACTCATTAAAACAGAGGAGGCTGGCCAGCGATACCCAGGATACTGTTTTCATAGACGAAATCTGGCTTaGCACCTATCTCCAAGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: ELIKTEEAGQRYPGYCFHRRNLA*HLSPRR Trigger: TCGCCTTGGAGATAGGTGCAAAGCCAGATTTCGTCT...ATGAAAACAGTATCCTGGGTATCGCTGGCCAGCCTCCTCTGTTTTAATGAGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
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| CDS-3UTR CAA 90 bp | GGCAATTCTGCAGCCCAATTCAGTGGGCTTAGAAGAAAGAAGTTTCCTTTGGAATCCAGGAGTTTAGAGTaGTGCAGGAAGTTGGGGAAG | + |
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Preference number: 5 (lower is better) Translates to: GNSAAQFSGLRRKKFPLESRSLE*CRKLGK Trigger: CTTCCCCAACTTCCTGCACAACTCTAAACTCCTGGA...TTCCAAAGGAAACTTCTTTCTTCTAAGCCCACTGAATTGGGCTGCAGAATTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
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| CDS GCA 90 bp | AGCCAGTTTAGGGTCTTTGAAAAAGAGAGAGACGAAATCTGGCTTTaGACCTATCTCCAAGGCGAGTTCATCCAGGTAGTCAACGTAGTT | + |
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Preference number: 5 (lower is better) Translates to: SQFRVFEKERDEIWL*TYLQGEFIQVVNVV Trigger: AACTACGTTGACTACCTGGATGAACTCGCCTTGGAGATAGGTGCAAAGCCAGATTTCGTCTCTCTCTTTTTCAAAGACCCTAAACTGGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045902.13 ENSMUST00000111510.8 |
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| CDS CCA 90 bp | TTTCACAGCCAGTTTAGGGTCTTTGAAAAAGAGAGAGACGAAATCTaGCTTTGCACCTATCTCCAAGGCGAGTTCATCCAGGTAGTCAAC | + |
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Preference number: 5 (lower is better) Translates to: FHSQFRVFEKERDEI*LCTYLQGEFIQVVN Trigger: GTTGACTACCTGGATGAACTCGCCTTGGAGATAGGTGCAAAGCCAGATTTCGTCTCTCTCTTTTTCAAAGACCCTAAACTGGCTGTGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045902.13 ENSMUST00000111510.8 |
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| CDS-3UTR CAA 90 bp | GAATACCATGTGGAGACTGATGAATTTGGGGAAACAATGATAAGAACATCCTGTCCTGAAGCTCTACGGTaGGGAAGATGGAGCCTAGAG | + |
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Preference number: 5 (lower is better) Translates to: EYHVETDEFGETMIRTSCPEALR*GRWSLE Trigger: CTCTAGGCTCCATCTTCCCAACCGTAGAGCTTCAGG...ACAGGATGTTCTTATCATTGTTTCCCCAAATTCATCAGTCTCCACATGGTATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045902.13 ENSMUST00000111510.8 |
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| CDS-3UTR CAA 90 bp | TCTGTACTACTGTGTTTATCCCAAGTGCTTTTTAAATTCCAGCGGACATACAGAAACCCCACTGGGTGCTaGTATTCGCGGCTATGGAAA | + |
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Preference number: 5 (lower is better) Translates to: SVLLCLSQVLFKFQRTYRNPTGC*YSRLWK Trigger: TTTCCATAGCCGCGAATACAAGCACCCAGTGGGGTT...TCTGTATGTCCGCTGGAATTTAAAAAGCACTTGGGATAAACACAGTAGTACAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
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| CDS-3UTR CAA 90 bp | ATTATAATGAGGATGGAATTTCTCCAGTTTCCCTTTCAAAGAGGCAGTGATGGAAACCCCACTGGGTGCTaGTATTCGCGGCTATGGAAA | + |
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Preference number: 5 (lower is better) Translates to: IIMRMEFLQFPFQRGSDGNPTGC*YSRLWK Trigger: TTTCCATAGCCGCGAATACAAGCACCCAGTGGGGTT...TCCATCACTGCCTCTTTGAAAGGGAAACTGGAGAAATTCCATCCTCATTATAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045902.13 ENSMUST00000111510.8 |
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| CDS-3UTR CAA 90 bp | GTGTGTGTTCAAGTGCGTGCAGTTGCAGGGTTATGTGGAAACATATACAAACATGGGGGAAACATGGCTTaGTACAGGGAAACCCTATTA | + |
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Preference number: 5 (lower is better) Translates to: VCVQVRAVAGLCGNIYKHGGNMA*YRETLL Trigger: TAATAGGGTTTCCCTGTACAAAGCCATGTTTCCCCC...ATGTTTGTATATGTTTCCACATAACCCTGCAACTGCACGCACTTGAACACACAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
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| CDS-3UTR CAA 90 bp | ATTATAATGAGGATGGAATTTCTCCAGTTTCCCTTTCAAAGAGGCAGTGATGGATCCAGGAGTTTAGAGTaGTGCAGGAAGTTGGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: IIMRMEFLQFPFQRGSDGSRSLE*CRKLGK Trigger: CTTCCCCAACTTCCTGCACAACTCTAAACTCCTGGA...TCCATCACTGCCTCTTTGAAAGGGAAACTGGAGAAATTCCATCCTCATTATAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045902.13 ENSMUST00000111510.8 |
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| CDS-3UTR CAA 90 bp | TCTGTACTACTGTGTTTATCCCAAGTGCTTTTTAAATTCCAGCGGACATACAGAACCCGTGTTTTTACTTaGATGGCTCCGTACAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SVLLCLSQVLFKFQRTYRTRVFT*MAPYSR Trigger: CCTGCTGTACGGAGCCATCAAAGTAAAAACACGGGT...TCTGTATGTCCGCTGGAATTTAAAAAGCACTTGGGATAAACACAGTAGTACAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000045902.13 |
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| CDS-3UTR CAA 90 bp | ATTATAATGAGGATGGAATTTCTCCAGTTTCCCTTTCAAAGAGGCAGTGATGGAACCCGTGTTTTTACTTaGATGGCTCCGTACAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: IIMRMEFLQFPFQRGSDGTRVFT*MAPYSR Trigger: CCTGCTGTACGGAGCCATCAAAGTAAAAACACGGGT...TCCATCACTGCCTCTTTGAAAGGGAAACTGGAGAAATTCCATCCTCATTATAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045902.13 ENSMUST00000111510.8 |
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| CDS-3UTR CAA 90 bp | ATTATAATGAGGATGGAATTTCTCCAGTTTCCCTTTCAAAGAGGCAGTGATGGAAGACGAAATCTGGCTTaGCACCTATCTCCAAGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: IIMRMEFLQFPFQRGSDGRRNLA*HLSPRR Trigger: TCGCCTTGGAGATAGGTGCAAAGCCAGATTTCGTCT...TCCATCACTGCCTCTTTGAAAGGGAAACTGGAGAAATTCCATCCTCATTATAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045902.13 ENSMUST00000111510.8 |
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| CDS-3UTR CAA 90 bp | GAATACCATGTGGAGACTGATGAATTTGGGGAAACAATGATAAGAACATCCTGTGGGGGAAACATGGCTTaGTACAGGGAAACCCTATTA | + |
|
Preference number: 5 (lower is better) Translates to: EYHVETDEFGETMIRTSCGGNMA*YRETLL Trigger: TAATAGGGTTTCCCTGTACAAAGCCATGTTTCCCCC...ACAGGATGTTCTTATCATTGTTTCCCCAAATTCATCAGTCTCCACATGGTATTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045902.13 ENSMUST00000111510.8 |
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| CDS-3UTR CAA 90 bp | ATTATAATGAGGATGGAATTTCTCCAGTTTCCCTTTCAAAGAGGCAGTGATGGAAAGCTACACAAGCCTTaGAAAACTCTTGTCGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: IIMRMEFLQFPFQRGSDGKLHKP*KTLVAQ Trigger: CTGGGCGACAAGAGTTTTCAAAGGCTTGTGTAGCTT...TCCATCACTGCCTCTTTGAAAGGGAAACTGGAGAAATTCCATCCTCATTATAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045902.13 ENSMUST00000111510.8 |
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| CDS-3UTR CAA 90 bp | ATTATAATGAGGATGGAATTTCTCCAGTTTCCCTTTCAAAGAGGCAGTGATGGAAAACAGGACATTTCTTaGCTAGTGTTGGTAATGACA | + |
|
Preference number: 5 (lower is better) Translates to: IIMRMEFLQFPFQRGSDGKQDIS*LVLVMT Trigger: TGTCATTACCAACACTAGCAAAGAAATGTCCTGTTT...TCCATCACTGCCTCTTTGAAAGGGAAACTGGAGAAATTCCATCCTCATTATAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045902.13 ENSMUST00000111510.8 |
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| CDS-3UTR CAA 90 bp | GAATACCATGTGGAGACTGATGAATTTGGGGAAACAATGATAAGAACATCCTGTAAACAGGACATTTCTTaGCTAGTGTTGGTAATGACA | + |
|
Preference number: 5 (lower is better) Translates to: EYHVETDEFGETMIRTSCKQDIS*LVLVMT Trigger: TGTCATTACCAACACTAGCAAAGAAATGTCCTGTTT...ACAGGATGTTCTTATCATTGTTTCCCCAAATTCATCAGTCTCCACATGGTATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045902.13 ENSMUST00000111510.8 |
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| CDS TCA 72 bp | ACTGGCCTCGGAACCTCTCAATACCTGGGAATGACTTaGGTGGCAGGTGAGGCTGGATGTGATGGCCGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: TGLGTSQYLGMT*VAGEAGCDGRC Trigger: GCAGCGGCCATCACATCCAGCCTCACCTGCCACTCAAGTCATTCCCAGGTATTGAGAGGTTCCGAGGCCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045902.13 ENSMUST00000111510.8 |
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| CDS TCA 72 bp | GCTCTACGGTTGGGAAGATGGAGCCTAGAGGCTGGATaGGACCTATGCACGCAAGGGTTGGCTTCTCCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: ALRLGRWSLEAG*DLCTQGLASPG Trigger: ACCTGGAGAAGCCAACCCTTGCGTGCATAGGTCTCATCCAGCCTCTAGGCTCCATCTTCCCAACCGTAGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045902.13 ENSMUST00000111510.8 |
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| CDS TCA 72 bp | CACAAGCCTTTGAAAACTCTTGTCGCCCAGCGCGCCTaGAGCTCTACGGTTGGGAAGATGGAGCCTAGAGGC | + |
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Preference number: 6 (lower is better) Translates to: HKPLKTLVAQRA*SSTVGKMEPRG Trigger: GCCTCTAGGCTCCATCTTCCCAACCGTAGAGCTTCAGGCGCGCTGGGCGACAAGAGTTTTCAAAGGCTTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045902.13 ENSMUST00000111510.8 |
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| CDS GCA 72 bp | ACCACCAGGATGCGTTTCCCCTCAAACCCCACTGGGTaGTTGTATTCGCGGCTATGGAAATACTGGCCTCGG | + |
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Preference number: 6 (lower is better) Translates to: TTRMRFPSNPTG*LYSRLWKYWPR Trigger: CCGAGGCCAGTATTTCCATAGCCGCGAATACAAGCACCCAGTGGGGTTTGAGGGGAAACGCATCCTGGTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045902.13 ENSMUST00000111510.8 |
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| CDS CCA 72 bp | CCCTCAAACCCCACTGGGTGCTTGTATTCGCGGCTATaGAAATACTGGCCTCGGAACCTCTCAATACCTGGG | + |
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Preference number: 6 (lower is better) Translates to: PSNPTGCLYSRL*KYWPRNLSIPG Trigger: CCCAGGTATTGAGAGGTTCCGAGGCCAGTATTTCCATAGCCGCGAATACAAGCACCCAGTGGGGTTTGAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045902.13 ENSMUST00000111510.8 |
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| CDS CCA 72 bp | TCCAACCACCAGGATGCGTTTCCCCTCAAACCCCACTaGGTGCTTGTATTCGCGGCTATGGAAATACTGGCC | + |
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Preference number: 6 (lower is better) Translates to: SNHQDAFPLKPH*VLVFAAMEILA Trigger: GGCCAGTATTTCCATAGCCGCGAATACAAGCACCCAGTGGGGTTTGAGGGGAAACGCATCCTGGTGGTTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045902.13 ENSMUST00000111510.8 |
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| CDS CAA 72 bp | ACCAGGATGCGTTTCCCCTCAAACCCCACTGGGTGCTaGTATTCGCGGCTATGGAAATACTGGCCTCGGAAC | + |
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Preference number: 6 (lower is better) Translates to: TRMRFPSNPTGC*YSRLWKYWPRN Trigger: GTTCCGAGGCCAGTATTTCCATAGCCGCGAATACAAGCACCCAGTGGGGTTTGAGGGGAAACGCATCCTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045902.13 ENSMUST00000111510.8 |
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| CDS CCA 72 bp | TTGAGCAGGAAAGACACTGGGGCACTATCAGAGGACTaGAGAGTCCGGGTCTTTAAGGGTTTCAGGATCCTC | + |
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Preference number: 6 (lower is better) Translates to: LSRKDTGALSED*RVRVFKGFRIL Trigger: GAGGATCCTGAAACCCTTAAAGACCCGGACTCTCCAGTCCTCTGATAGTGCCCCAGTGTCTTTCCTGCTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045902.13 ENSMUST00000111510.8 |
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| CDS CAA 90 bp | ATTCCAACCACCAGGATGCGTTTCCCCTCAAACCCCACTGGGTGCTaGTATTCGCGGCTATGGAAATACTGGCCTCGGAACCTCTCAATA | + |
|
Preference number: 6 (lower is better) Translates to: IPTTRMRFPSNPTGC*YSRLWKYWPRNLSI Trigger: TATTGAGAGGTTCCGAGGCCAGTATTTCCATAGCCGCGAATACAAGCACCCAGTGGGGTTTGAGGGGAAACGCATCCTGGTGGTTGGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045902.13 ENSMUST00000111510.8 |
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| CDS TCA 72 bp | GGCCGTCTTACTCAGTTCAGAGGCAATATCTGCAGCTaGGTTTCCTATTCCAACCACCAGGATGCGTTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: GRLTQFRGNICS*VSYSNHQDAFP Trigger: GGGAAACGCATCCTGGTGGTTGGAATAGGAAACTCAGCTGCAGATATTGCCTCTGAACTGAGTAAGACGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045902.13 ENSMUST00000111510.8 |
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| CDS CAA 72 bp | TTGAACCATCGATTCATCTGTTGTTCCATCATCCACTaGACGACCGTGCGGGGCAGGACATTTCGGAGCATG | + |
|
Preference number: 6 (lower is better) Translates to: LNHRFICCSIIH*TTVRGRTFRSM Trigger: CATGCTCCGAAATGTCCTGCCCCGCACGGTCGTCAAGTGGATGATGGAACAACAGATGAATCGATGGTTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045902.13 ENSMUST00000111510.8 |
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| CDS GCA 72 bp | TATCTGCAGCTGAGTTTCCTATTCCAACCACCAGGATaGGTTTCCCCTCAAACCCCACTGGGTGCTTGTATT | + |
|
Preference number: 6 (lower is better) Translates to: YLQLSFLFQPPG*VSPQTPLGACI Trigger: AATACAAGCACCCAGTGGGGTTTGAGGGGAAACGCATCCTGGTGGTTGGAATAGGAAACTCAGCTGCAGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045902.13 ENSMUST00000111510.8 |
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| CDS CAA 90 bp | AGGCACCAGACCATAATTTTCATGGTTGAACCATCGATTCATCTGTaGTTCCATCATCCACTTGACGACCGTGCGGGGCAGGACATTTCG | + |
|
Preference number: 6 (lower is better) Translates to: RHQTIIFMVEPSIHL*FHHPLDDRAGQDIS Trigger: CGAAATGTCCTGCCCCGCACGGTCGTCAAGTGGATGATGGAACAACAGATGAATCGATGGTTCAACCATGAAAATTATGGTCTGGTGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045902.13 ENSMUST00000111510.8 |
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| CDS CAA 90 bp | TTTTCATGGTTGAACCATCGATTCATCTGTTGTTCCATCATCCACTaGACGACCGTGCGGGGCAGGACATTTCGGAGCATGGAGCTAAAT | + |
|
Preference number: 6 (lower is better) Translates to: FSWLNHRFICCSIIH*TTVRGRTFRSMELN Trigger: ATTTAGCTCCATGCTCCGAAATGTCCTGCCCCGCACGGTCGTCAAGTGGATGATGGAACAACAGATGAATCGATGGTTCAACCATGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045902.13 ENSMUST00000111510.8 |
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| CDS GCA 72 bp | AGGGTCTTTGAAAAAGAGAGAGACGAAATCTGGCTTTaGACCTATCTCCAAGGCGAGTTCATCCAGGTAGTC | + |
|
Preference number: 6 (lower is better) Translates to: RVFEKERDEIWL*TYLQGEFIQVV Trigger: GACTACCTGGATGAACTCGCCTTGGAGATAGGTGCAAAGCCAGATTTCGTCTCTCTCTTTTTCAAAGACCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045902.13 ENSMUST00000111510.8 |
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| CDS TCA 72 bp | GTACAGGGAAACCCTATTATCCTCCACTTTAACAAGTaGGTCTTCCAGGAAAGAAAAAGAGAACGTATACCC | + |
|
Preference number: 6 (lower is better) Translates to: VQGNPIILHFNK*VFQERKRERIP Trigger: GGGTATACGTTCTCTTTTTCTTTCCTGGAAGACTCACTTGTTAAAGTGGAGGATAATAGGGTTTCCCTGTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045902.13 ENSMUST00000111510.8 |
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| CDS TCA 72 bp | ATTTGTTCTGAGGCACCAGACCATAATTTTCATGGTTaGACCATCGATTCATCTGTTGTTCCATCATCCACT | + |
|
Preference number: 6 (lower is better) Translates to: ICSEAPDHNFHG*TIDSSVVPSST Trigger: AGTGGATGATGGAACAACAGATGAATCGATGGTTCAACCATGAAAATTATGGTCTGGTGCCTCAGAACAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045902.13 ENSMUST00000111510.8 |
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