Pregenerated sensors for FMN2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028354Ensembl transcript IDs: ENSMUST00000030039.13, ENSMUST00000195621.2
Found 230 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGTCTAGGAGGATGGAGCTTCCTTCCCTCCTTCATGTCAGGTGGATaGTGCGCAAGTTGTTTCAATGTCTTGTTTTCTTCTGCTGTTCTG | + |
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Preference number: 1 (lower is better) Translates to: GLGGWSFLPSFMSGG*CASCFNVLFSSAVL Trigger: CAGAACAGCAGAAGAAAACAAGACATTGAAACAACTTGCGCAGCATCCACCTGACATGAAGGAGGGAAGGAAGCTCCATCCTCCTAGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| 3UTR CCA 90 bp | AAAAGGTCTAGGAGGATGGAGCTTCCTTCCCTCCTTCATGTCAGGTaGATGCTGCGCAAGTTGTTTCAATGTCTTGTTTTCTTCTGCTGT | + |
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Preference number: 1 (lower is better) Translates to: KRSRRMELPSLLHVR*MLRKLFQCLVFFCC Trigger: ACAGCAGAAGAAAACAAGACATTGAAACAACTTGCGCAGCATCCACCTGACATGAAGGAGGGAAGGAAGCTCCATCCTCCTAGACCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| 3UTR CCA 90 bp | GAATTTATGCAGATAGTGCCTCTTAGACGTGCCACTTGGGTCTGTTaGTATAACACCACAATGTTTACAAAAAGGAAAGGTGTTCAATCT | + |
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Preference number: 1 (lower is better) Translates to: EFMQIVPLRRATWVC*YNTTMFTKRKGVQS Trigger: AGATTGAACACCTTTCCTTTTTGTAAACATTGTGGTGTTATACCAACAGACCCAAGTGGCACGTCTAAGAGGCACTATCTGCATAAATTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| 3UTR CCA 90 bp | TCATGTTCAGAATTTATGCAGATAGTGCCTCTTAGACGTGCCACTTaGGTCTGTTGGTATAACACCACAATGTTTACAAAAAGGAAAGGT | + |
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Preference number: 1 (lower is better) Translates to: SCSEFMQIVPLRRAT*VCWYNTTMFTKRKG Trigger: ACCTTTCCTTTTTGTAAACATTGTGGTGTTATACCAACAGACCCAAGTGGCACGTCTAAGAGGCACTATCTGCATAAATTCTGAACATGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| 3UTR GCA 90 bp | ATAGAAACACTAAATACAGTATTGCACATAGCGATCTTTGTTAAATaGCCTATTACTTCATTGAAGAGTGGTATGTACACATTGGCAGGA | + |
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Preference number: 1 (lower is better) Translates to: IETLNTVLHIAIFVK*PITSLKSGMYTLAG Trigger: TCCTGCCAATGTGTACATACCACTCTTCAATGAAGTAATAGGGCATTTAACAAAGATCGCTATGTGCAATACTGTATTTAGTGTTTCTAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| 3UTR CAA 90 bp | TTTGTTAAATGCCCTATTACTTCATTGAAGAGTGGTATGTACACATaGGCAGGACTGTGGGACAGGAAAGCTACAAAACACCAGCAGAAG | + |
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Preference number: 2 (lower is better) Translates to: FVKCPITSLKSGMYT*AGLWDRKATKHQQK Trigger: CTTCTGCTGGTGTTTTGTAGCTTTCCTGTCCCACAGTCCTGCCAATGTGTACATACCACTCTTCAATGAAGTAATAGGGCATTTAACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| 3UTR CAA 90 bp | ACAGTATTGCACATAGCGATCTTTGTTAAATGCCCTATTACTTCATaGAAGAGTGGTATGTACACATTGGCAGGACTGTGGGACAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: TVLHIAIFVKCPITS*KSGMYTLAGLWDRK Trigger: TTTCCTGTCCCACAGTCCTGCCAATGTGTACATACCACTCTTCAATGAAGTAATAGGGCATTTAACAAAGATCGCTATGTGCAATACTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| 3UTR-3UTR CCA 90 bp | CTTAAGCATGGGAGAGGTATGAATCATGACATATTGATGGTATTTACTTCTCAAAAAGGTCTAGGAGGATaGAGCTTCCTTCCCTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: LKHGRGMNHDILMVFTSQKGLGG*SFLPSF Trigger: GAAGGAGGGAAGGAAGCTCCATCCTCCTAGACCTTT...TTGAGAAGTAAATACCATCAATATGTCATGATTCATACCTCTCCCATGCTTAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| 3UTR CCA 72 bp | TTATGCAAGAGGTTCAGAGGAAAAGGTCTAGGAGGATaGAGCTTCCTTCCCTCCTTCATGTCAGGTGGATGC | + |
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Preference number: 3 (lower is better) Translates to: LCKRFRGKGLGG*SFLPSFMSGGC Trigger: GCATCCACCTGACATGAAGGAGGGAAGGAAGCTCCATCCTCCTAGACCTTTTCCTCTGAACCTCTTGCATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| 3UTR CCA 72 bp | AGGAGGATGGAGCTTCCTTCCCTCCTTCATGTCAGGTaGATGCTGCGCAAGTTGTTTCAATGTCTTGTTTTC | + |
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Preference number: 3 (lower is better) Translates to: RRMELPSLLHVR*MLRKLFQCLVF Trigger: GAAAACAAGACATTGAAACAACTTGCGCAGCATCCACCTGACATGAAGGAGGGAAGGAAGCTCCATCCTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| 3UTR GCA 72 bp | GGATGGAGCTTCCTTCCCTCCTTCATGTCAGGTGGATaGTGCGCAAGTTGTTTCAATGTCTTGTTTTCTTCT | + |
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Preference number: 3 (lower is better) Translates to: GWSFLPSFMSGG*CASCFNVLFSS Trigger: AGAAGAAAACAAGACATTGAAACAACTTGCGCAGCATCCACCTGACATGAAGGAGGGAAGGAAGCTCCATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| 3UTR CCA 72 bp | CAGATAGTGCCTCTTAGACGTGCCACTTGGGTCTGTTaGTATAACACCACAATGTTTACAAAAAGGAAAGGT | + |
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Preference number: 3 (lower is better) Translates to: QIVPLRRATWVC*YNTTMFTKRKG Trigger: ACCTTTCCTTTTTGTAAACATTGTGGTGTTATACCAACAGACCCAAGTGGCACGTCTAAGAGGCACTATCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| 3UTR-3UTR CAA 90 bp | TGCCTAGAAAACATGAAGATTATGCAAGAGGTTCAGAGGAAAAGGTCTAGGAGGTGGATGCTGCGCAAGTaGTTTCAATGTCTTGTTTTC | + |
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Preference number: 3 (lower is better) Translates to: CLENMKIMQEVQRKRSRRWMLRK*FQCLVF Trigger: GAAAACAAGACATTGAAACAACTTGCGCAGCATCCA...CCTCCTAGACCTTTTCCTCTGAACCTCTTGCATAATCTTCATGTTTTCTAGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| 3UTR CCA 72 bp | GAATTTATGCAGATAGTGCCTCTTAGACGTGCCACTTaGGTCTGTTGGTATAACACCACAATGTTTACAAAA | + |
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Preference number: 3 (lower is better) Translates to: EFMQIVPLRRAT*VCWYNTTMFTK Trigger: TTTTGTAAACATTGTGGTGTTATACCAACAGACCCAAGTGGCACGTCTAAGAGGCACTATCTGCATAAATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| 3UTR GCA 72 bp | CTAAATACAGTATTGCACATAGCGATCTTTGTTAAATaGCCTATTACTTCATTGAAGAGTGGTATGTACACA | + |
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Preference number: 3 (lower is better) Translates to: LNTVLHIAIFVK*PITSLKSGMYT Trigger: TGTGTACATACCACTCTTCAATGAAGTAATAGGGCATTTAACAAAGATCGCTATGTGCAATACTGTATTTAG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS-3UTR GCA 90 bp | GATGGAGCTTCCTTCCCTCCTTCATGTCAGGTGGATGCTGCGCAAGTTGTTTCACGCTGGAGCCCCAGGTaGCTTGGCGGCCAGTACAGG | + |
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Preference number: 4 (lower is better) Translates to: DGASFPPSCQVDAAQVVSRWSPR*LGGQYR Trigger: CCTGTACTGGCCGCCAAGGCACCTGGGGCTCCAGCG...TGAAACAACTTGCGCAGCATCCACCTGACATGAAGGAGGGAAGGAAGCTCCATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS-3UTR TCA 90 bp | GATGGAGCTTCCTTCCCTCCTTCATGTCAGGTGGATGCTGCGCAAGTTGTTTCAGGAGTGTGGAGGACCTaGGCCAGGCAACAGTGGGGG | + |
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Preference number: 4 (lower is better) Translates to: DGASFPPSCQVDAAQVVSGVWRT*ARQQWG Trigger: CCCCCACTGTTGCCTGGCTCAGGTCCTCCACACTCC...TGAAACAACTTGCGCAGCATCCACCTGACATGAAGGAGGGAAGGAAGCTCCATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS-3UTR TCA 90 bp | GATGGAGCTTCCTTCCCTCCTTCATGTCAGGTGGATGCTGCGCAAGTTGTTTCACGCTCGCCTTCTTTGTaGTTTCCGCATCCCTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: DGASFPPSCQVDAAQVVSRSPSL*FPHPWA Trigger: GGCCCAGGGATGCGGAAATCACAAAGAAGGCGAGCG...TGAAACAACTTGCGCAGCATCCACCTGACATGAAGGAGGGAAGGAAGCTCCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS-3UTR CCA 90 bp | TGCCTAGAAAACATGAAGATTATGCAAGAGGTTCAGAGGAAAAGGTCTAGGAGGTGCCCCAGGGGGAGGTaGGGCGGGAGGTGGAACCCC | + |
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Preference number: 4 (lower is better) Translates to: CLENMKIMQEVQRKRSRRCPRGR*GGRWNP Trigger: GGGGTTCCACCTCCCGCCCCACCTCCCCCTGGGGCA...CCTCCTAGACCTTTTCCTCTGAACCTCTTGCATAATCTTCATGTTTTCTAGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS-3UTR GCA 90 bp | GCTGCAGACCAGTTTTTCATAGGGCTTCAAGGGAAATATCATAGAGAGCAACTTGTGCACGGAGCCTCCTaGCCCTGGCGTACGGACGCC | + |
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Preference number: 4 (lower is better) Translates to: AADQFFIGLQGKYHREQLVHGAS*PWRTDA Trigger: GGCGTCCGTACGCCAGGGGCAGGAGGCTCCGTGCAC...AAGTTGCTCTCTATGATATTTCCCTTGAAGCCCTATGAAAAACTGGTCTGCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS-3UTR CCA 90 bp | TCCCTCCTTCATGTCAGGTGGATGCTGCGCAAGTTGTTTCAATGTCTTGTTTTCGCTCCGCCGCCTTCGTaGGAGGCATCACCTGCGCTT | + |
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Preference number: 4 (lower is better) Translates to: SLLHVRWMLRKLFQCLVFAPPPS*EASPAL Trigger: AAGCGCAGGTGATGCCTCCCACGAAGGCGGCGGAGC...GAAAACAAGACATTGAAACAACTTGCGCAGCATCCACCTGACATGAAGGAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS-3UTR CCA 90 bp | GATGGAGCTTCCTTCCCTCCTTCATGTCAGGTGGATGCTGCGCAAGTTGTTTCAGGCCCGTTCTCCTGCTaGCTAAACAGCTTCTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: DGASFPPSCQVDAAQVVSGPFSC*LNSFSS Trigger: GCTGGAGAAGCTGTTTAGCCAGCAGGAGAACGGGCC...TGAAACAACTTGCGCAGCATCCACCTGACATGAAGGAGGGAAGGAAGCTCCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS-3UTR TCA 90 bp | GATGGAGCTTCCTTCCCTCCTTCATGTCAGGTGGATGCTGCGCAAGTTGTTTCACTGGACCCAGCGTTCTaGTTACACGGTTCCCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: DGASFPPSCQVDAAQVVSLDPAF*LHGSLK Trigger: CTTCAGGGAACCGTGTAATCAGAACGCTGGGTCCAG...TGAAACAACTTGCGCAGCATCCACCTGACATGAAGGAGGGAAGGAAGCTCCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS-3UTR CCA 90 bp | AGACGTGCCACTTGGGTCTGTTGGTATAACACCACAATGTTTACAAAAAGGAAAGGCGGCTCCCTCCCCTaGCCCAGCCTCCGGAAAGGT | + |
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Preference number: 4 (lower is better) Translates to: RRATWVCWYNTTMFTKRKGGSLP*PSLRKG Trigger: ACCTTTCCGGAGGCTGGGCCAGGGGAGGGAGCCGCC...TTTCCTTTTTGTAAACATTGTGGTGTTATACCAACAGACCCAAGTGGCACGTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS-3UTR TCA 90 bp | GCTGCAGACCAGTTTTTCATAGGGCTTCAAGGGAAATATCATAGAGAGCAACTTAGAAAGGCCCCAGGCTaGGGGGAGATGGCAGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: AADQFFIGLQGKYHREQLRKAPG*GEMAVG Trigger: CCCCACTGCCATCTCCCCTCAGCCTGGGGCCTTTCT...AAGTTGCTCTCTATGATATTTCCCTTGAAGCCCTATGAAAAACTGGTCTGCAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS-3UTR TCA 90 bp | TCATGTCAGGTGGATGCTGCGCAAGTTGTTTCAATGTCTTGTTTTCTTCTGCTGATGAGAGAGAGTCTGTaGCTGCGGAGGGGGCGGTCG | + |
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Preference number: 4 (lower is better) Translates to: SCQVDAAQVVSMSCFLLLMRESL*LRRGRS Trigger: CGACCGCCCCCTCCGCAGTCACAGACTCTCTCTCAT...CAGCAGAAGAAAACAAGACATTGAAACAACTTGCGCAGCATCCACCTGACATGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS-3UTR GCA 90 bp | GATGGAGCTTCCTTCCCTCCTTCATGTCAGGTGGATGCTGCGCAAGTTGTTTCAAGCTTCTGCTGCTGCTaGTGTTGCAGACGAATTGCC | + |
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Preference number: 4 (lower is better) Translates to: DGASFPPSCQVDAAQVVSSFCCC*CCRRIA Trigger: GGCAATTCGTCTGCAACAGCAGCAGCAGCAGAAGCT...TGAAACAACTTGCGCAGCATCCACCTGACATGAAGGAGGGAAGGAAGCTCCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS-3UTR GCA 90 bp | CCCTCCTTCATGTCAGGTGGATGCTGCGCAAGTTGTTTCAATGTCTTGTTTTCTCTCTCCACTTGCAGCTaGAGGGGACCCCAGAAGACC | + |
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Preference number: 4 (lower is better) Translates to: PSFMSGGCCASCFNVLFSLSTCS*RGPQKT Trigger: GGTCTTCTGGGGTCCCCTGCAGCTGCAAGTGGAGAG...AGAAAACAAGACATTGAAACAACTTGCGCAGCATCCACCTGACATGAAGGAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS-3UTR CCA 90 bp | TCCCTCCTTCATGTCAGGTGGATGCTGCGCAAGTTGTTTCAATGTCTTGTTTTCTGCTCTTCTTCTTGCTaGTCTCCCCGCTGCCCCCTC | + |
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Preference number: 4 (lower is better) Translates to: SLLHVRWMLRKLFQCLVFCSSSC*SPRCPL Trigger: GAGGGGGCAGCGGGGAGACCAGCAAGAAGAAGAGCA...GAAAACAAGACATTGAAACAACTTGCGCAGCATCCACCTGACATGAAGGAGGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS-3UTR CCA 90 bp | AGACGTGCCACTTGGGTCTGTTGGTATAACACCACAATGTTTACAAAAAGGAAAGAGGGGAGATGGCAGTaGGGGGCGCTGCAGGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: RRATWVCWYNTTMFTKRKEGRWQ*GALQAP Trigger: AGGAGCCTGCAGCGCCCCCCACTGCCATCTCCCCTC...TTTCCTTTTTGTAAACATTGTGGTGTTATACCAACAGACCCAAGTGGCACGTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS-3UTR CCA 90 bp | CCCTCCTTCATGTCAGGTGGATGCTGCGCAAGTTGTTTCAATGTCTTGTTTTCTGGTCCCAGCAAGAACTaGTCCAGGCCCAGAAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: PSFMSGGCCASCFNVLFSGPSKN*SRPRKA Trigger: GGCCTTTCTGGGCCTGGACCAGTTCTTGCTGGGACC...AGAAAACAAGACATTGAAACAACTTGCGCAGCATCCACCTGACATGAAGGAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS-3UTR CCA 90 bp | TCATGTCAGGTGGATGCTGCGCAAGTTGTTTCAATGTCTTGTTTTCTTCTGCTGGTCCTGAGAGGCCTCTaGGTCCCTCCAAGTCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: SCQVDAAQVVSMSCFLLLVLRGL*VPPSPG Trigger: CCCTGGACTTGGAGGGACCCAGAGGCCTCTCAGGAC...CAGCAGAAGAAAACAAGACATTGAAACAACTTGCGCAGCATCCACCTGACATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS-3UTR TCA 90 bp | TCCCTCCTTCATGTCAGGTGGATGCTGCGCAAGTTGTTTCAATGTCTTGTTTTCTCCATTCTCAAGTCCTaGGAGGCCTCTGGGTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: SLLHVRWMLRKLFQCLVFSILKS*EASGSL Trigger: GAGGGACCCAGAGGCCTCTCAGGACTTGAGAATGGA...GAAAACAAGACATTGAAACAACTTGCGCAGCATCCACCTGACATGAAGGAGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS-3UTR CCA 90 bp | TGCCTAGAAAACATGAAGATTATGCAAGAGGTTCAGAGGAAAAGGTCTAGGAGGGGCTCCTCGGAGTCCTaGAGCAGCAGCTTCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: CLENMKIMQEVQRKRSRRGSSES*SSSFCC Trigger: GCAGCAGAAGCTGCTGCTCCAGGACTCCGAGGAGCC...CCTCCTAGACCTTTTCCTCTGAACCTCTTGCATAATCTTCATGTTTTCTAGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS-3UTR CCA 90 bp | GTGTTCAATCTCCACAGGTCTACTGCTTTTGCCATTTTAAAGGCACATACAATAGAGCCCCAGGTGCCTTaGCGGCCAGTACAGGGGACC | + |
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Preference number: 4 (lower is better) Translates to: VFNLHRSTAFAILKAHTIEPQVP*RPVQGT Trigger: GGTCCCCTGTACTGGCCGCCAAGGCACCTGGGGCTC...TATTGTATGTGCCTTTAAAATGGCAAAAGCAGTAGACCTGTGGAGATTGAACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS-3UTR TCA 90 bp | CCCTCCTTCATGTCAGGTGGATGCTGCGCAAGTTGTTTCAATGTCTTGTTTTCTTTTCTCCAGCCTCTGTaGGGCTTCTTCCACCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: PSFMSGGCCASCFNVLFSFLQPL*GFFHLW Trigger: CCAGAGGTGGAAGAAGCCTCACAGAGGCTGGAGAAA...AGAAAACAAGACATTGAAACAACTTGCGCAGCATCCACCTGACATGAAGGAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS-3UTR GCA 90 bp | TCCCTCCTTCATGTCAGGTGGATGCTGCGCAAGTTGTTTCAATGTCTTGTTTTCGTCCTTTGTCCATCTTaGGCTCCAGCCGCAGTTTCC | + |
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Preference number: 4 (lower is better) Translates to: SLLHVRWMLRKLFQCLVFVLCPS*APAAVS Trigger: GGAAACTGCGGCTGGAGCGCAAGATGGACAAAGGAC...GAAAACAAGACATTGAAACAACTTGCGCAGCATCCACCTGACATGAAGGAGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS-3UTR GCA 90 bp | TGCCTAGAAAACATGAAGATTATGCAAGAGGTTCAGAGGAAAAGGTCTAGGAGGGAGAGAGTCTGTGACTaGGGAGGGGGCGGTCGCATA | + |
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Preference number: 4 (lower is better) Translates to: CLENMKIMQEVQRKRSRRERVCD*GGGGRI Trigger: TATGCGACCGCCCCCTCCGCAGTCACAGACTCTCTC...CCTCCTAGACCTTTTCCTCTGAACCTCTTGCATAATCTTCATGTTTTCTAGGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS-3UTR CCA 90 bp | GCTGCAGACCAGTTTTTCATAGGGCTTCAAGGGAAATATCATAGAGAGCAACTTGGCTTCTTCCACCTCTaGGACCCATTCCTCCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: AADQFFIGLQGKYHREQLGFFHL*DPFLPW Trigger: CCAGGGGAGGAATGGGTCCCAGAGGTGGAAGAAGCC...AAGTTGCTCTCTATGATATTTCCCTTGAAGCCCTATGAAAAACTGGTCTGCAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS-3UTR TCA 90 bp | AGACGTGCCACTTGGGTCTGTTGGTATAACACCACAATGTTTACAAAAAGGAAAAATCGGCAGGGCCTGTaGGTCCAGCACATCCTCTCG | + |
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Preference number: 4 (lower is better) Translates to: RRATWVCWYNTTMFTKRKNRQGL*VQHILS Trigger: CGAGAGGATGTGCTGGACTCACAGGCCCTGCCGATT...TTTCCTTTTTGTAAACATTGTGGTGTTATACCAACAGACCCAAGTGGCACGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS-3UTR TCA 90 bp | TCATCATGTTCAGAATTTATGCAGATAGTGCCTCTTAGACGTGCCACTTGGGTCTTGGTGACTATAGAGTaGGCGCTGTCCAGCTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: SSCSEFMQIVPLRRATWVLVTIE*ALSSSP Trigger: TGGGGAGCTGGACAGCGCTCACTCTATAGTCACCAA...GACCCAAGTGGCACGTCTAAGAGGCACTATCTGCATAAATTCTGAACATGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS-3UTR TCA 90 bp | TCATGTCAGGTGGATGCTGCGCAAGTTGTTTCAATGTCTTGTTTTCTTCTGCTGATCGAATGTGTGGGTTaGCTAACCGCAGCCCAGGTG | + |
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Preference number: 4 (lower is better) Translates to: SCQVDAAQVVSMSCFLLLIECVG*LTAAQV Trigger: CACCTGGGCTGCGGTTAGTCAACCCACACATTCGAT...CAGCAGAAGAAAACAAGACATTGAAACAACTTGCGCAGCATCCACCTGACATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS-3UTR TCA 90 bp | GATGGAGCTTCCTTCCCTCCTTCATGTCAGGTGGATGCTGCGCAAGTTGTTTCATGGGGAAGTCTGTATTaGTTTTGCCTCAAGAGTCCT | + |
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Preference number: 4 (lower is better) Translates to: DGASFPPSCQVDAAQVVSWGSLY*FCLKSP Trigger: AGGACTCTTGAGGCAAAATCAATACAGACTTCCCCA...TGAAACAACTTGCGCAGCATCCACCTGACATGAAGGAGGGAAGGAAGCTCCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS-3UTR GCA 90 bp | TCATCATGTTCAGAATTTATGCAGATAGTGCCTCTTAGACGTGCCACTTGGGTCTGCTGCTGCTGCTGTTaGAGACGAATTGCCTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: SSCSEFMQIVPLRRATWVCCCCC*RRIACW Trigger: CCAGCAGGCAATTCGTCTGCAACAGCAGCAGCAGCA...GACCCAAGTGGCACGTCTAAGAGGCACTATCTGCATAAATTCTGAACATGATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS-3UTR GCA 90 bp | TCATCATGTTCAGAATTTATGCAGATAGTGCCTCTTAGACGTGCCACTTGGGTCTGGAGCAGCAGCTTCTaGTGCTGCTGCTGTTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: SSCSEFMQIVPLRRATWVWSSSF*CCCCCR Trigger: TCTGCAACAGCAGCAGCAGCAGAAGCTGCTGCTCCA...GACCCAAGTGGCACGTCTAAGAGGCACTATCTGCATAAATTCTGAACATGATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS-3UTR GCA 90 bp | TGCCTAGAAAACATGAAGATTATGCAAGAGGTTCAGAGGAAAAGGTCTAGGAGGGGAGGCCCGTTCTCCTaGTGGCTAAACAGCTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: CLENMKIMQEVQRKRSRRGGPFS*WLNSFS Trigger: GGAGAAGCTGTTTAGCCAGCAGGAGAACGGGCCTCC...CCTCCTAGACCTTTTCCTCTGAACCTCTTGCATAATCTTCATGTTTTCTAGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS-3UTR GCA 90 bp | CCCTCCTTCATGTCAGGTGGATGCTGCGCAAGTTGTTTCAATGTCTTGTTTTCTAAGACCCTCTGGTGGTaGCTTTGGAGGTGGCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: PSFMSGGCCASCFNVLFSKTLWW*LWRWQC Trigger: ACATTGCCACCTCCAAAGGCACCACCAGAGGGTCTT...AGAAAACAAGACATTGAAACAACTTGCGCAGCATCCACCTGACATGAAGGAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR CCA 90 bp | GTCTGTTGGTATAACACCACAATGTTTACAAAAAGGAAAGGTGTTCAATCTCCATCCTCCGCGGTCGCCTaGATCCCTACCCCAGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VCWYNTTMFTKRKGVQSPSSAVA*IPTPAS Trigger: TGAGGCTGGGGTAGGGATCCAGGCGACCGCGGAGGA...TGGAGATTGAACACCTTTCCTTTTTGTAAACATTGTGGTGTTATACCAACAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR TCA 90 bp | CCCTCCTTCATGTCAGGTGGATGCTGCGCAAGTTGTTTCAATGTCTTGTTTTCTGTAGATGTCCGTGTCTaGACCAGAACTGGTCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PSFMSGGCCASCFNVLFSVDVRV*TRTGPL Trigger: CAAAGGACCAGTTCTGGTTCAGACACGGACATCTAC...AGAAAACAAGACATTGAAACAACTTGCGCAGCATCCACCTGACATGAAGGAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR GCA 90 bp | GATGGAGCTTCCTTCCCTCCTTCATGTCAGGTGGATGCTGCGCAAGTTGTTTCAAGACACACTGCTCTTTaGCAGCATCCTCATCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: DGASFPPSCQVDAAQVVSRHTAL*QHPHQN Trigger: ATTTTGATGAGGATGCTGGCAAAGAGCAGTGTGTCT...TGAAACAACTTGCGCAGCATCCACCTGACATGAAGGAGGGAAGGAAGCTCCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR GCA 90 bp | AGACGTGCCACTTGGGTCTGTTGGTATAACACCACAATGTTTACAAAAAGGAAAAAGCTCCTGGGGTTCTaGCAGCGGGAAGACACACTG | + |
|
Preference number: 4 (lower is better) Translates to: RRATWVCWYNTTMFTKRKKLLGF*QREDTL Trigger: CAGTGTGTCTTCCCGCTGGCAGAACCCCAGGAGCTT...TTTCCTTTTTGTAAACATTGTGGTGTTATACCAACAGACCCAAGTGGCACGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR CCA 90 bp | TCATGTCAGGTGGATGCTGCGCAAGTTGTTTCAATGTCTTGTTTTCTTCTGCTGCTGTATCAACGTCCTTaGGACTGGGCTCTTCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SCQVDAAQVVSMSCFLLLLYQRP*DWALPQ Trigger: CTGAGGAAGAGCCCAGTCCCAAGGACGTTGATACAG...CAGCAGAAGAAAACAAGACATTGAAACAACTTGCGCAGCATCCACCTGACATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR CCA 90 bp | GTGTTCAATCTCCACAGGTCTACTGCTTTTGCCATTTTAAAGGCACATACAATATCCCACTCCTGGAAGTaGAGGGGGTGGGGGTATTCC | + |
|
Preference number: 4 (lower is better) Translates to: VFNLHRSTAFAILKAHTISHSWK*RGWGYS Trigger: GGAATACCCCCACCCCCTCCACTTCCAGGAGTGGGA...TATTGTATGTGCCTTTAAAATGGCAAAAGCAGTAGACCTGTGGAGATTGAACAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR CCA 90 bp | TCATCATGTTCAGAATTTATGCAGATAGTGCCTCTTAGACGTGCCACTTGGGTCATAGAGAGGCTTCATTaGCCGGCAAGGCTCGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSCSEFMQIVPLRRATWVIERLH*PARLDQ Trigger: CTGATCGAGCCTTGCCGGCCAATGAAGCCTCTCTAT...GACCCAAGTGGCACGTCTAAGAGGCACTATCTGCATAAATTCTGAACATGATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR CCA 90 bp | CCCTCCTTCATGTCAGGTGGATGCTGCGCAAGTTGTTTCAATGTCTTGTTTTCTTTCATCTGTGAGGCCTaGAAAAGCTCCTGGGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PSFMSGGCCASCFNVLFSFICEA*KSSWGS Trigger: AGAACCCCAGGAGCTTTTCCAGGCCTCACAGATGAA...AGAAAACAAGACATTGAAACAACTTGCGCAGCATCCACCTGACATGAAGGAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR TCA 90 bp | TCATCATGTTCAGAATTTATGCAGATAGTGCCTCTTAGACGTGCCACTTGGGTCGGCATCCAGCTGTACTaGTATTCTCCTTGGAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: SSCSEFMQIVPLRRATWVGIQLY*YSPWRH Trigger: GTGTCTCCAAGGAGAATATCAGTACAGCTGGATGCC...GACCCAAGTGGCACGTCTAAGAGGCACTATCTGCATAAATTCTGAACATGATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR TCA 90 bp | TCATGTCAGGTGGATGCTGCGCAAGTTGTTTCAATGTCTTGTTTTCTTCTGCTGCCTCCTCGGCTTCTTTaGCTCTCTCTTGCAGAATCA | + |
|
Preference number: 4 (lower is better) Translates to: SCQVDAAQVVSMSCFLLLPPRLL*LSLAES Trigger: TGATTCTGCAAGAGAGAGTCAAAGAAGCCGAGGAGG...CAGCAGAAGAAAACAAGACATTGAAACAACTTGCGCAGCATCCACCTGACATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR GCA 90 bp | TATCATAGAGAGCAACTTAAGCATGGGAGAGGTATGAATCATGACATATTGATGCCCCCTTGCCGTGCTTaGCAAGCGCCTTTTTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: YHREQLKHGRGMNHDILMPPCRA*QAPFCS Trigger: GGAGCAAAAAGGCGCTTGGCAAGCACGGCAAGGGGG...CATCAATATGTCATGATTCATACCTCTCCCATGCTTAAGTTGCTCTCTATGATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR GCA 90 bp | AGACGTGCCACTTGGGTCTGTTGGTATAACACCACAATGTTTACAAAAAGGAAAGAGAGCAAATCCTCCTaGTCCGTAGCGGAGTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RRATWVCWYNTTMFTKRKESKSS*SVAEWK Trigger: CTTCCACTCCGCTACGGAGCAGGAGGATTTGCTCTC...TTTCCTTTTTGTAAACATTGTGGTGTTATACCAACAGACCCAAGTGGCACGTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR GCA 90 bp | TATCATAGAGAGCAACTTAAGCATGGGAGAGGTATGAATCATGACATATTGATGCCGGAGGACGGAGGATaGTCAGGCACCAGAGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: YHREQLKHGRGMNHDILMPEDGG*SGTRDL Trigger: CAAGTCTCTGGTGCCTGAGCATCCTCCGTCCTCCGG...CATCAATATGTCATGATTCATACCTCTCCCATGCTTAAGTTGCTCTCTATGATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR GCA 90 bp | TCCCTCCTTCATGTCAGGTGGATGCTGCGCAAGTTGTTTCAATGTCTTGTTTTCAGGCAAAGAAACGACTaGGGAGGTAATGGATTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SLLHVRWMLRKLFQCLVFRQRND*GGNGFS Trigger: CGAGAATCCATTACCTCCGCAGTCGTTTCTTTGCCT...GAAAACAAGACATTGAAACAACTTGCGCAGCATCCACCTGACATGAAGGAGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR GCA 90 bp | TCATGTCAGGTGGATGCTGCGCAAGTTGTTTCAATGTCTTGTTTTCTTCTGCTGGTTTCTGACTCAGTATaGAGAGAAGGTTGGGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SCQVDAAQVVSMSCFLLLVSDSV*REGWEG Trigger: GCCCTCCCAACCTTCTCTGCATACTGAGTCAGAAAC...CAGCAGAAGAAAACAAGACATTGAAACAACTTGCGCAGCATCCACCTGACATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR CCA 90 bp | TATCATAGAGAGCAACTTAAGCATGGGAGAGGTATGAATCATGACATATTGATGCCCCAGAAGACCCTCTaGTGGTGCCTTTGGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: YHREQLKHGRGMNHDILMPQKTL*WCLWRW Trigger: CCACCTCCAAAGGCACCACCAGAGGGTCTTCTGGGG...CATCAATATGTCATGATTCATACCTCTCCCATGCTTAAGTTGCTCTCTATGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR CCA 90 bp | TGCCTAGAAAACATGAAGATTATGCAAGAGGTTCAGAGGAAAAGGTCTAGGAGGTGTACAAGGCAGAGGTaGTGCGGGTGGGACATTACA | + |
|
Preference number: 4 (lower is better) Translates to: CLENMKIMQEVQRKRSRRCTRQR*CGWDIT Trigger: TGTAATGTCCCACCCGCACCACCTCTGCCTTGTACA...CCTCCTAGACCTTTTCCTCTGAACCTCTTGCATAATCTTCATGTTTTCTAGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR CCA 90 bp | GTCTGTTGGTATAACACCACAATGTTTACAAAAAGGAAAGGTGTTCAATCTCCAGCCTGGAAAAGCTCCTaGGGTTCTGCCAGCGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VCWYNTTMFTKRKGVQSPAWKSS*GSASGK Trigger: CTTCCCGCTGGCAGAACCCCAGGAGCTTTTCCAGGC...TGGAGATTGAACACCTTTCCTTTTTGTAAACATTGTGGTGTTATACCAACAGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR CCA 90 bp | TCCCTCCTTCATGTCAGGTGGATGCTGCGCAAGTTGTTTCAATGTCTTGTTTTCACTGAAGAAAACATTTaGGGACACCTCCTTCTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLLHVRWMLRKLFQCLVFTEENI*GHLLLA Trigger: GGCGAGAAGGAGGTGTCCCCAAATGTTTTCTTCAGT...GAAAACAAGACATTGAAACAACTTGCGCAGCATCCACCTGACATGAAGGAGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| 3UTR CAA 72 bp | CCTTCCCTCCTTCATGTCAGGTGGATGCTGCGCAAGTaGTTTCAATGTCTTGTTTTCTTCTGCTGTTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PSLLHVRWMLRK*FQCLVFFCCSG Trigger: ACCAGAACAGCAGAAGAAAACAAGACATTGAAACAACTTGCGCAGCATCCACCTGACATGAAGGAGGGAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR TCA 90 bp | TGCCTAGAAAACATGAAGATTATGCAAGAGGTTCAGAGGAAAAGGTCTAGGAGGAGAAATCCACACCCTTaGGGTGCTGCTGGTAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: CLENMKIMQEVQRKRSRRRNPHP*GAAGKV Trigger: CACTTTACCAGCAGCACCTCAAGGGTGTGGATTTCT...CCTCCTAGACCTTTTCCTCTGAACCTCTTGCATAATCTTCATGTTTTCTAGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR GCA 90 bp | GTGTTCAATCTCCACAGGTCTACTGCTTTTGCCATTTTAAAGGCACATACAATAAGCAGCAGCTTCTGCTaGTGCTGCTGTTGCAGACGA | + |
|
Preference number: 4 (lower is better) Translates to: VFNLHRSTAFAILKAHTISSSFC*CCCCRR Trigger: TCGTCTGCAACAGCAGCAGCAGCAGAAGCTGCTGCT...TATTGTATGTGCCTTTAAAATGGCAAAAGCAGTAGACCTGTGGAGATTGAACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR GCA 90 bp | TGCCTAGAAAACATGAAGATTATGCAAGAGGTTCAGAGGAAAAGGTCTAGGAGGAGTCCTTGGAGGCTGTaGAACCTTCCCATGCAATAC | + |
|
Preference number: 4 (lower is better) Translates to: CLENMKIMQEVQRKRSRRSPWRL*NLPMQY Trigger: GTATTGCATGGGAAGGTTGCACAGCCTCCAAGGACT...CCTCCTAGACCTTTTCCTCTGAACCTCTTGCATAATCTTCATGTTTTCTAGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR GCA 90 bp | TCATCATGTTCAGAATTTATGCAGATAGTGCCTCTTAGACGTGCCACTTGGGTCACTAAACCCAGGACTTaGATGACCCCTGGTCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: SSCSEFMQIVPLRRATWVTKPRT*MTPGPF Trigger: AAATGGACCAGGGGTCATGCAAGTCCTGGGTTTAGT...GACCCAAGTGGCACGTCTAAGAGGCACTATCTGCATAAATTCTGAACATGATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR CCA 90 bp | ACAGTATTGCACATAGCGATCTTTGTTAAATGCCCTATTACTTCATTGAAGAGTAGGTTGGGGAGGGGCTaGCAGCATTTCTGGTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TVLHIAIFVKCPITSLKSRLGRG*QHFWSL Trigger: CAGGGACCAGAAATGCTGCCAGCCCCTCCCCAACCT...ACTCTTCAATGAAGTAATAGGGCATTTAACAAAGATCGCTATGTGCAATACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR CCA 90 bp | TCCCTCCTTCATGTCAGGTGGATGCTGCGCAAGTTGTTTCAATGTCTTGTTTTCGTTTGTCGAGAGACTTaGCGTTTTCCTTGTCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLLHVRWMLRKLFQCLVFVCRET*RFPCLW Trigger: CCAAAGACAAGGAAAACGCCAAGTCTCTCGACAAAC...GAAAACAAGACATTGAAACAACTTGCGCAGCATCCACCTGACATGAAGGAGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR TCA 90 bp | TGCCTAGAAAACATGAAGATTATGCAAGAGGTTCAGAGGAAAAGGTCTAGGAGGTGGTCAGGTTCTTTCTaGTCCGCAGGTTGGAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: CLENMKIMQEVQRKRSRRWSGSF*SAGWKT Trigger: TGTTTTCCAACCTGCGGATCAGAAAGAACCTGACCA...CCTCCTAGACCTTTTCCTCTGAACCTCTTGCATAATCTTCATGTTTTCTAGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR TCA 90 bp | GTCTGTTGGTATAACACCACAATGTTTACAAAAAGGAAAGGTGTTCAATCTCCATGCCTGCTGGATGTCTaGGAGCAAATCCTCCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VCWYNTTMFTKRKGVQSPCLLDV*EQILLL Trigger: GAGCAGGAGGATTTGCTCTCAGACATCCAGCAGGCA...TGGAGATTGAACACCTTTCCTTTTTGTAAACATTGTGGTGTTATACCAACAGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR TCA 90 bp | CTTAAGCATGGGAGAGGTATGAATCATGACATATTGATGGTATTTACTTCTCAACAGCCTCCGGAAAGGTaGAGGCTGGTGATGAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LKHGRGMNHDILMVFTSQQPPER*RLVMRE Trigger: CTCTCTCATCACCAGCCTTCACCTTTCCGGAGGCTG...TTGAGAAGTAAATACCATCAATATGTCATGATTCATACCTCTCCCATGCTTAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR TCA 90 bp | GCTGCAGACCAGTTTTTCATAGGGCTTCAAGGGAAATATCATAGAGAGCAACTTTTCAAACTTCATCTGTaGGGCCTGGAAAAGCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: AADQFFIGLQGKYHREQLFKLHL*GLEKLL Trigger: CAGGAGCTTTTCCAGGCCTCACAGATGAAGTTTGAA...AAGTTGCTCTCTATGATATTTCCCTTGAAGCCCTATGAAAAACTGGTCTGCAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR TCA 90 bp | TGCCTAGAAAACATGAAGATTATGCAAGAGGTTCAGAGGAAAAGGTCTAGGAGGTCCAAAAAGCATTTATaGGTCTCTGTCAGGGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: CLENMKIMQEVQRKRSRRSKKHL*VSVRAA Trigger: GGCTGCCCTGACAGAGACTCATAAATGCTTTTTGGA...CCTCCTAGACCTTTTCCTCTGAACCTCTTGCATAATCTTCATGTTTTCTAGGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR GCA 90 bp | ACAGTATTGCACATAGCGATCTTTGTTAAATGCCCTATTACTTCATTGAAGAGTGTGGGAGGCATCACCTaGGCTTCTCTTCAGCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TVLHIAIFVKCPITSLKSVGGIT*ASLQLP Trigger: GGGAAGCTGAAGAGAAGCGCAGGTGATGCCTCCCAC...ACTCTTCAATGAAGTAATAGGGCATTTAACAAAGATCGCTATGTGCAATACTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR GCA 90 bp | TGCCTAGAAAACATGAAGATTATGCAAGAGGTTCAGAGGAAAAGGTCTAGGAGGTGCAGACGAATTGCCTaGTGGATGTCTGAGAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: CLENMKIMQEVQRKRSRRCRRIA*WMSESK Trigger: TTTGCTCTCAGACATCCAGCAGGCAATTCGTCTGCA...CCTCCTAGACCTTTTCCTCTGAACCTCTTGCATAATCTTCATGTTTTCTAGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR GCA 90 bp | AGACGTGCCACTTGGGTCTGTTGGTATAACACCACAATGTTTACAAAAAGGAAAGTGCTGCTGGTAAAGTaGTACTCCCAACTTGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RRATWVCWYNTTMFTKRKVLLVK*YSQLVR Trigger: CCTCACAAGTTGGGAGTAGCACTTTACCAGCAGCAC...TTTCCTTTTTGTAAACATTGTGGTGTTATACCAACAGACCCAAGTGGCACGTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR GCA 90 bp | GCTGCAGACCAGTTTTTCATAGGGCTTCAAGGGAAATATCATAGAGAGCAACTTGATTTTCCTTTCTTCTaGCTACACACCTCCTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: AADQFFIGLQGKYHREQLDFPFF*LHTSSA Trigger: AGCCGAGGAGGTGTGTAGGCAGAAGAAAGGAAAATC...AAGTTGCTCTCTATGATATTTCCCTTGAAGCCCTATGAAAAACTGGTCTGCAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR CCA 90 bp | TGCCTAGAAAACATGAAGATTATGCAAGAGGTTCAGAGGAAAAGGTCTAGGAGGTGTCTGAACCAGAACTaGTCCTTTGTCCATCTTGCG | + |
|
Preference number: 4 (lower is better) Translates to: CLENMKIMQEVQRKRSRRCLNQN*SFVHLA Trigger: CGCAAGATGGACAAAGGACCAGTTCTGGTTCAGACA...CCTCCTAGACCTTTTCCTCTGAACCTCTTGCATAATCTTCATGTTTTCTAGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR CCA 90 bp | GTCTGTTGGTATAACACCACAATGTTTACAAAAAGGAAAGGTGTTCAATCTCCAGCAGGGGGTGATGAGTaGGTAAGGTTTGAAGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: VCWYNTTMFTKRKGVQSPAGGDE*VRFEAA Trigger: CGCTGCTTCAAACCTTACCCACTCATCACCCCCTGC...TGGAGATTGAACACCTTTCCTTTTTGTAAACATTGTGGTGTTATACCAACAGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR CCA 90 bp | GTGTTCAATCTCCACAGGTCTACTGCTTTTGCCATTTTAAAGGCACATACAATACTCTGGTGGTGCCTTTaGAGGTGGCAATGTCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: VFNLHRSTAFAILKAHTILWWCL*RWQCQD Trigger: ATCCTGACATTGCCACCTCCAAAGGCACCACCAGAG...TATTGTATGTGCCTTTAAAATGGCAAAAGCAGTAGACCTGTGGAGATTGAACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR CCA 90 bp | GTGTTCAATCTCCACAGGTCTACTGCTTTTGCCATTTTAAAGGCACATACAATACAGAGGTGGTGCGGGTaGGACATTACAGTTGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VFNLHRSTAFAILKAHTIQRWCG*DITVVS Trigger: GGAAACAACTGTAATGTCCCACCCGCACCACCTCTG...TATTGTATGTGCCTTTAAAATGGCAAAAGCAGTAGACCTGTGGAGATTGAACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR CCA 90 bp | CTTAAGCATGGGAGAGGTATGAATCATGACATATTGATGGTATTTACTTCTCAAAGAGAGACAGGGAGGTaGGGGAATTGCCATGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LKHGRGMNHDILMVFTSQRETGR*GNCHAQ Trigger: CTGGGCATGGCAATTCCCCCACCTCCCTGTCTCTCT...TTGAGAAGTAAATACCATCAATATGTCATGATTCATACCTCTCCCATGCTTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR CCA 90 bp | TCATGTCAGGTGGATGCTGCGCAAGTTGTTTCAATGTCTTGTTTTCTTCTGCTGCTTCTCGCCGAGTTTTaGTTTCATGAAGTAGTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SCQVDAAQVVSMSCFLLLLLAEF*FHEVVG Trigger: GCCTACTACTTCATGAAACCAAAACTCGGCGAGAAG...CAGCAGAAGAAAACAAGACATTGAAACAACTTGCGCAGCATCCACCTGACATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| 3UTR CAA 72 bp | TGCCCTATTACTTCATTGAAGAGTGGTATGTACACATaGGCAGGACTGTGGGACAGGAAAGCTACAAAACAC | + |
|
Preference number: 4 (lower is better) Translates to: CPITSLKSGMYT*AGLWDRKATKH Trigger: GTGTTTTGTAGCTTTCCTGTCCCACAGTCCTGCCAATGTGTACATACCACTCTTCAATGAAGTAATAGGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR TCA 90 bp | GCTGCAGACCAGTTTTTCATAGGGCTTCAAGGGAAATATCATAGAGAGCAACTTCGAGTTTTGGTTTCATaGAGTAGTAGGCTGTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: AADQFFIGLQGKYHREQLRVLVS*SSRLWS Trigger: AGACCACAGCCTACTACTTCATGAAACCAAAACTCG...AAGTTGCTCTCTATGATATTTCCCTTGAAGCCCTATGAAAAACTGGTCTGCAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR CCA 90 bp | CTTAAGCATGGGAGAGGTATGAATCATGACATATTGATGGTATTTACTTCTCAACAGAAGACCCTCTGGTaGTGCCTTTGGAGGTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LKHGRGMNHDILMVFTSQQKTLW*CLWRWQ Trigger: TTGCCACCTCCAAAGGCACCACCAGAGGGTCTTCTG...TTGAGAAGTAAATACCATCAATATGTCATGATTCATACCTCTCCCATGCTTAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR CCA 90 bp | TCCCTCCTTCATGTCAGGTGGATGCTGCGCAAGTTGTTTCAATGTCTTGTTTTCGAAACAGAATGTTCATaGCTGGTTTCTGACTCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: SLLHVRWMLRKLFQCLVFETECS*LVSDSV Trigger: TACTGAGTCAGAAACCAGCCATGAACATTCTGTTTC...GAAAACAAGACATTGAAACAACTTGCGCAGCATCCACCTGACATGAAGGAGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR CCA 90 bp | ACAGTATTGCACATAGCGATCTTTGTTAAATGCCCTATTACTTCATTGAAGAGTTCCGCAGAGGACACCTaGTACACTTTACCGGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TVLHIAIFVKCPITSLKSSAEDT*YTLPAS Trigger: GGAAGCCGGTAAAGTGTACCAGGTGTCCTCTGCGGA...ACTCTTCAATGAAGTAATAGGGCATTTAACAAAGATCGCTATGTGCAATACTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS-3UTR TCA 90 bp | ACAGTATTGCACATAGCGATCTTTGTTAAATGCCCTATTACTTCATTGAAGAGTCCTGTGAACACGTTCTaGAAGCCATCAGCTGTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: TVLHIAIFVKCPITSLKSPVNTF*KPSAVA Trigger: AGCGACAGCTGATGGCTTTCAGAACGTGTTCACAGG...ACTCTTCAATGAAGTAATAGGGCATTTAACAAAGATCGCTATGTGCAATACTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS-3UTR TCA 90 bp | GTGTTCAATCTCCACAGGTCTACTGCTTTTGCCATTTTAAAGGCACATACAATAGAACAGAATTTTGTCTaGGGTCCAGAGGGTGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: VFNLHRSTAFAILKAHTIEQNFV*GPEGEV Trigger: AACCTCACCCTCTGGACCTCAGACAAAATTCTGTTC...TATTGTATGTGCCTTTAAAATGGCAAAAGCAGTAGACCTGTGGAGATTGAACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS-3UTR TCA 90 bp | TATCATAGAGAGCAACTTAAGCATGGGAGAGGTATGAATCATGACATATTGATGGCTCCATGTTTTCCTTaGAAGGCTGCATATGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: YHREQLKHGRGMNHDILMAPCFP*KAAYAP Trigger: CGGAGCATATGCAGCCTTTCAAGGAAAACATGGAGC...CATCAATATGTCATGATTCATACCTCTCCCATGCTTAAGTTGCTCTCTATGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS-3UTR GCA 90 bp | CTTAAGCATGGGAGAGGTATGAATCATGACATATTGATGGTATTTACTTCTCAATTAGGAGAGCTGAGCTaGCGAGTGGTGGTCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: LKHGRGMNHDILMVFTSQLGELS*RVVVLM Trigger: CATCAAGACCACCACTCGGCAGCTCAGCTCTCCTAA...TTGAGAAGTAAATACCATCAATATGTCATGATTCATACCTCTCCCATGCTTAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS-3UTR GCA 90 bp | TCATGTCAGGTGGATGCTGCGCAAGTTGTTTCAATGTCTTGTTTTCTTCTGCTGGTAGCAATTCTAACTTaGGACGAATTGAGCAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: SCQVDAAQVVSMSCFLLLVAILT*DELSKC Trigger: GCATTTGCTCAATTCGTCGCAAGTTAGAATTGCTAC...CAGCAGAAGAAAACAAGACATTGAAACAACTTGCGCAGCATCCACCTGACATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS-3UTR CCA 90 bp | GTGTTCAATCTCCACAGGTCTACTGCTTTTGCCATTTTAAAGGCACATACAATATGCGTAGATCCTCGATaGTCTGTTCCAGTTGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VFNLHRSTAFAILKAHTICVDPR*SVPVAE Trigger: TTCAGCAACTGGAACAGACCATCGAGGATCTACGCA...TATTGTATGTGCCTTTAAAATGGCAAAAGCAGTAGACCTGTGGAGATTGAACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS-3UTR CCA 90 bp | TATCATAGAGAGCAACTTAAGCATGGGAGAGGTATGAATCATGACATATTGATGTGGTGCCTTTGGAGGTaGCAATGTCAGGATTCTACC | + |
|
Preference number: 4 (lower is better) Translates to: YHREQLKHGRGMNHDILMWCLWR*QCQDST Trigger: GGTAGAATCCTGACATTGCCACCTCCAAAGGCACCA...CATCAATATGTCATGATTCATACCTCTCCCATGCTTAAGTTGCTCTCTATGATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| 3UTR CAA 72 bp | CACATAGCGATCTTTGTTAAATGCCCTATTACTTCATaGAAGAGTGGTATGTACACATTGGCAGGACTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HIAIFVKCPITS*KSGMYTLAGLW Trigger: CCACAGTCCTGCCAATGTGTACATACCACTCTTCAATGAAGTAATAGGGCATTTAACAAAGATCGCTATGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS-3UTR TCA 90 bp | ACAGTATTGCACATAGCGATCTTTGTTAAATGCCCTATTACTTCATTGAAGAGTTGTTGTCGCTGCTTTTaGCATCCTTCAGCTTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TVLHIAIFVKCPITSLKSCCRCF*HPSAWA Trigger: TGCCCAAGCTGAAGGATGTCAAAAGCAGCGACAACA...ACTCTTCAATGAAGTAATAGGGCATTTAACAAAGATCGCTATGTGCAATACTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS-3UTR TCA 90 bp | AGACGTGCCACTTGGGTCTGTTGGTATAACACCACAATGTTTACAAAAAGGAAAATTCATGCCAGACACTaGAGAAAACATTTGGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: RRATWVCWYNTTMFTKRKIHARH*RKHLGT Trigger: TGTCCCCAAATGTTTTCTTCAGTGTCTGGCATGAAT...TTTCCTTTTTGTAAACATTGTGGTGTTATACCAACAGACCCAAGTGGCACGTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS-3UTR GCA 90 bp | CTTAAGCATGGGAGAGGTATGAATCATGACATATTGATGGTATTTACTTCTCAAAGCAGCTTCTGCTGCTaGTGCTGTTGCAGACGAATT | + |
|
Preference number: 4 (lower is better) Translates to: LKHGRGMNHDILMVFTSQSSFCC*CCCRRI Trigger: AATTCGTCTGCAACAGCAGCAGCAGCAGAAGCTGCT...TTGAGAAGTAAATACCATCAATATGTCATGATTCATACCTCTCCCATGCTTAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS-3UTR GCA 90 bp | GTCTGTTGGTATAACACCACAATGTTTACAAAAAGGAAAGGTGTTCAATCTCCATTTTCCTTGAAAGGCTaGATATGCTCCGCAGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VCWYNTTMFTKRKGVQSPFSLKG*ICSAED Trigger: GTCCTCTGCGGAGCATATGCAGCCTTTCAAGGAAAA...TGGAGATTGAACACCTTTCCTTTTTGTAAACATTGTGGTGTTATACCAACAGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS-3UTR CCA 90 bp | TGCCTAGAAAACATGAAGATTATGCAAGAGGTTCAGAGGAAAAGGTCTAGGAGGTGCTCTCTGAAAATGTaGACTGAAACAGGATACAGA | + |
|
Preference number: 4 (lower is better) Translates to: CLENMKIMQEVQRKRSRRCSLKM*TETGYR Trigger: TCTGTATCCTGTTTCAGTCCACATTTTCAGAGAGCA...CCTCCTAGACCTTTTCCTCTGAACCTCTTGCATAATCTTCATGTTTTCTAGGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS-3UTR TCA 90 bp | ACAGTATTGCACATAGCGATCTTTGTTAAATGCCCTATTACTTCATTGAAGAGTGAAGACCCATGGCGATaGTCCGGGAGCAAAATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TVLHIAIFVKCPITSLKSEDPWR*SGSKIF Trigger: AAAAATTTTGCTCCCGGATCATCGCCATGGGTCTTC...ACTCTTCAATGAAGTAATAGGGCATTTAACAAAGATCGCTATGTGCAATACTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS-3UTR TCA 90 bp | CTTAAGCATGGGAGAGGTATGAATCATGACATATTGATGGTATTTACTTCTCAATTCATGGCTGGTTTCTaGCTCAGTATGCAGAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LKHGRGMNHDILMVFTSQFMAGF*LSMQRR Trigger: CCTTCTCTGCATACTGAGTCAGAAACCAGCCATGAA...TTGAGAAGTAAATACCATCAATATGTCATGATTCATACCTCTCCCATGCTTAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS-3UTR TCA 90 bp | TGCCTAGAAAACATGAAGATTATGCAAGAGGTTCAGAGGAAAAGGTCTAGGAGGTTTGGCCTTTGTCTTTaGAATTGTGTCAGAAATAGG | + |
|
Preference number: 4 (lower is better) Translates to: CLENMKIMQEVQRKRSRRFGLCL*NCVRNR Trigger: CCTATTTCTGACACAATTTCAAAGACAAAGGCCAAA...CCTCCTAGACCTTTTCCTCTGAACCTCTTGCATAATCTTCATGTTTTCTAGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS-3UTR TCA 90 bp | GCTGCAGACCAGTTTTTCATAGGGCTTCAAGGGAAATATCATAGAGAGCAACTTCTTTCTTTAGTTTTCTaGGGTCTTTCTGGAAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: AADQFFIGLQGKYHREQLLSLVF*GLSGSL Trigger: AAGACTTCCAGAAAGACCTCAGAAAACTAAAGAAAG...AAGTTGCTCTCTATGATATTTCCCTTGAAGCCCTATGAAAAACTGGTCTGCAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS-3UTR GCA 90 bp | TATCATAGAGAGCAACTTAAGCATGGGAGAGGTATGAATCATGACATATTGATGACATCGAAAACTTCCTaGTGGACACCATTTGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: YHREQLKHGRGMNHDILMTSKTS*WTPFEH Trigger: ATGCTCAAATGGTGTCCAGCAGGAAGTTTTCGATGT...CATCAATATGTCATGATTCATACCTCTCCCATGCTTAAGTTGCTCTCTATGATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS-3UTR GCA 90 bp | CTTAAGCATGGGAGAGGTATGAATCATGACATATTGATGGTATTTACTTCTCAAGCTCAGCTATTTTTGTaGGTAGATCCTCGATGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LKHGRGMNHDILMVFTSQAQLFL*VDPRWS Trigger: AGACCATCGAGGATCTACGCACAAAAATAGCTGAGC...TTGAGAAGTAAATACCATCAATATGTCATGATTCATACCTCTCCCATGCTTAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS-3UTR CCA 90 bp | TATCATAGAGAGCAACTTAAGCATGGGAGAGGTATGAATCATGACATATTGATGCAGAATGTTCATGGCTaGTTTCTGACTCAGTATGCA | + |
|
Preference number: 4 (lower is better) Translates to: YHREQLKHGRGMNHDILMQNVHG*FLTQYA Trigger: TGCATACTGAGTCAGAAACCAGCCATGAACATTCTG...CATCAATATGTCATGATTCATACCTCTCCCATGCTTAAGTTGCTCTCTATGATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS-3UTR CCA 90 bp | TATCATAGAGAGCAACTTAAGCATGGGAGAGGTATGAATCATGACATATTGATGCGTTTTCCTTGTCTTTaGAAGATCGACTGTGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: YHREQLKHGRGMNHDILMRFPCL*KIDCAF Trigger: AAAAGCACAGTCGATCTTCCAAAGACAAGGAAAACG...CATCAATATGTCATGATTCATACCTCTCCCATGCTTAAGTTGCTCTCTATGATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS-3UTR GCA 90 bp | CTTAAGCATGGGAGAGGTATGAATCATGACATATTGATGGTATTTACTTCTCAAGACGAATTGAGCAAATaGTCTCTGAAAATGTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: LKHGRGMNHDILMVFTSQDELSK*SLKMWT Trigger: AGTCCACATTTTCAGAGAGCATTTGCTCAATTCGTC...TTGAGAAGTAAATACCATCAATATGTCATGATTCATACCTCTCCCATGCTTAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS-3UTR CCA 90 bp | GTCTGTTGGTATAACACCACAATGTTTACAAAAAGGAAAGGTGTTCAATCTCCATTTCTGAGGTCTTTCTaGAAGTCTTCAAACTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: VCWYNTTMFTKRKGVQSPFLRSF*KSSNFI Trigger: GATGAAGTTTGAAGACTTCCAGAAAGACCTCAGAAA...TGGAGATTGAACACCTTTCCTTTTTGTAAACATTGTGGTGTTATACCAACAGAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS-3UTR TCA 90 bp | CTTAAGCATGGGAGAGGTATGAATCATGACATATTGATGGTATTTACTTCTCAAAATTCTTCAAATTCATaGCAGTCTATGGATGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LKHGRGMNHDILMVFTSQNSSNS*QSMDGS Trigger: AGAGCCATCCATAGACTGTCATGAATTTGAAGAATT...TTGAGAAGTAAATACCATCAATATGTCATGATTCATACCTCTCCCATGCTTAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS-3UTR TCA 90 bp | CTTAAGCATGGGAGAGGTATGAATCATGACATATTGATGGTATTTACTTCTCAATTTTTCCAGTTCATCTaGCTGTGCTCTATTCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: LKHGRGMNHDILMVFTSQFFQFI*LCSILI Trigger: TATGAGAATAGAGCACAGTCAGATGAACTGGAAAAA...TTGAGAAGTAAATACCATCAATATGTCATGATTCATACCTCTCCCATGCTTAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS TCA 90 bp | TGCCGTGCTTGCCAAGCGCCTTTTTGCTCCCGCTCGCCTTCTTTGTaGTTTCCGCATCCCTGGGCCCCGCGGCATCCTCGGCTCCGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: CRACQAPFCSRSPSL*FPHPWAPRHPRLRR Trigger: GCGGCGGAGCCGAGGATGCCGCGGGGCCCAGGGATGCGGAAATCACAAAGAAGGCGAGCGGGAGCAAAAAGGCGCTTGGCAAGCACGGCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS CCA 90 bp | CCATCTTGCGCTCCAGCCGCAGTTTCCAAATCCTCCGCGGTCGCCTaGATCCCTACCCCAGCCTCAGCAGGCCTAGAAGCACCGGGATGG | + |
|
Preference number: 5 (lower is better) Translates to: PSCAPAAVSKSSAVA*IPTPASAGLEAPGW Trigger: CCATCCCGGTGCTTCTAGGCCTGCTGAGGCTGGGGTAGGGATCCAGGCGACCGCGGAGGATTTGGAAACTGCGGCTGGAGCGCAAGATGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS TCA 90 bp | TCCTCAGCGGAGAGGCTGAGGTCCGGGGTCTTGGTGACTATAGAGTaGGCGCTGTCCAGCTCCCCAATCGGCAGGGCCTGTGAGTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SSAERLRSGVLVTIE*ALSSSPIGRACESS Trigger: GCTGGACTCACAGGCCCTGCCGATTGGGGAGCTGGACAGCGCTCACTCTATAGTCACCAAGACCCCGGACCTCAGCCTCTCCGCTGAGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS GCA 90 bp | GGGGGCGCTGCAGGCTCCTCGGAGTCCTGGAGCAGCAGCTTCTGCTaGTGCTGCTGTTGCAGACGAATTGCCTGCTGGATGTCTGAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GGAAGSSESWSSSFC*CCCCRRIACWMSES Trigger: GCTCTCAGACATCCAGCAGGCAATTCGTCTGCAACAGCAGCAGCAGCAGAAGCTGCTGCTCCAGGACTCCGAGGAGCCTGCAGCGCCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS CCA 90 bp | CAGTGTTCTCCCTGTGAACACGTTCTGAAAGCCATCAGCTGTCGCTaGAGCCCCAGGTGCCTTGGCGGCCAGTACAGGGGACCCGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: QCSPCEHVLKAISCR*SPRCLGGQYRGPAT Trigger: GGTGGCGGGTCCCCTGTACTGGCCGCCAAGGCACCTGGGGCTCCAGCGACAGCTGATGGCTTTCAGAACGTGTTCACAGGGAGAACACTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS CCA 90 bp | GCTGAGCTGCCGAGTGGTGGTCTTGATGTAGCAGGGGGTGATGAGTaGGTAAGGTTTGAAGCAGCGTGGGCTGGGCGCAGGGCTTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: AELPSGGLDVAGGDE*VRFEAAWAGRRASR Trigger: CCTGGAAGCCCTGCGCCCAGCCCACGCTGCTTCAAACCTTACCCACTCATCACCCCCTGCTACATCAAGACCACCACTCGGCAGCTCAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS TCA 90 bp | GACTATAGAGTGAGCGCTGTCCAGCTCCCCAATCGGCAGGGCCTGTaGGTCCAGCACATCCTCTCGCGAGTCGCAGGCACCTTTCCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: DYRVSAVQLPNRQGL*VQHILSRVAGTFPL Trigger: AAGGGGAAAGGTGCCTGCGACTCGCGAGAGGATGTGCTGGACTCACAGGCCCTGCCGATTGGGGAGCTGGACAGCGCTCACTCTATAGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS GCA 90 bp | GAAGCAGCGTGGGCTGGGCGCAGGGCTTCCAGGCAAAGAAACGACTaGGGAGGTAATGGATTCTCGCATGCCCTCCTCCGGCTCTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: EAAWAGRRASRQRND*GGNGFSHALLRLFL Trigger: GAGAAAGAGCCGGAGGAGGGCATGCGAGAATCCATTACCTCCGCAGTCGTTTCTTTGCCTGGAAGCCCTGCGCCCAGCCCACGCTGCTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS CCA 90 bp | GCCTGGATCCCTACCCCAGCCTCAGCAGGCCTAGAAGCACCGGGATaGATCACCTCGAAAGGGTCAGCACACTCGGTATCCGATAGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: AWIPTPASAGLEAPG*ITSKGSAHSVSDRP Trigger: AGGCCTATCGGATACCGAGTGTGCTGACCCTTTCGAGGTGATCCATCCCGGTGCTTCTAGGCCTGCTGAGGCTGGGGTAGGGATCCAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS CCA 90 bp | CTTGATGTAGCAGGGGGTGATGAGTGGGTAAGGTTTGAAGCAGCGTaGGCTGGGCGCAGGGCTTCCAGGCAAAGAAACGACTGCGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: LDVAGGDEWVRFEAA*AGRRASRQRNDCGG Trigger: ACCTCCGCAGTCGTTTCTTTGCCTGGAAGCCCTGCGCCCAGCCCACGCTGCTTCAAACCTTACCCACTCATCACCCCCTGCTACATCAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS TCA 90 bp | ATCCTCCTGCTCCGTAGCGGAGTGGAAGCTGTAGATGTCCGTGTCTaGACCAGAACTGGTCCTTTGTCCATCTTGCGCTCCAGCCGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: ILLLRSGVEAVDVRV*TRTGPLSILRSSRS Trigger: ACTGCGGCTGGAGCGCAAGATGGACAAAGGACCAGTTCTGGTTCAGACACGGACATCTACAGCTTCCACTCCGCTACGGAGCAGGAGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS CCA 90 bp | CGTCTGCAGAGGCTGTCAATCCATTCTCAAGTCCTGAGAGGCCTCTaGGTCCCTCCAAGTCCAGGGCTGGATATTGCTTCTCTAGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: RLQRLSIHSQVLRGL*VPPSPGLDIASLAQ Trigger: CTGAGCTAGAGAAGCAATATCCAGCCCTGGACTTGGAGGGACCCAGAGGCCTCTCAGGACTTGAGAATGGATTGACAGCCTCTGCAGACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS TCA 90 bp | TGTATCAACGTCCTTGGGACTGGGCTCTTCCTCAGGAAGCTTGGATaGTGGCCACATAGATGGTTCTCTCCTGGGAAACTGCCCTTCGCT | + |
|
Preference number: 5 (lower is better) Translates to: CINVLGTGLFLRKLG*WPHRWFSPGKLPFA Trigger: AGCGAAGGGCAGTTTCCCAGGAGAGAACCATCTATGTGGCCATCATCCAAGCTTCCTGAGGAAGAGCCCAGTCCCAAGGACGTTGATACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS TCA 90 bp | CTGGTTTCTGACTCAGTATGCAGAGAAGGTTGGGAGGGCTGTCCCTaGCTATCAGACCCAAGGAGAGGAGGAGGTGGTGGTAGTTGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: LVSDSVCREGWEGCP*LSDPRRGGGGGSCD Trigger: ATCACAACTACCACCACCTCCTCCTCTCCTTGGGTCTGATAGTCAGGGACAGCCCTCCCAACCTTCTCTGCATACTGAGTCAGAAACCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS CCA 90 bp | TCCATGTTTTCCTTGAAAGGCTGCATATGCTCCGCAGAGGACACCTaGTACACTTTACCGGCTTCCGCCTCACAGGCTTTCAGGTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SMFSLKGCICSAEDT*YTLPASASQAFRSF Trigger: GAAAGACCTGAAAGCCTGTGAGGCGGAAGCCGGTAAAGTGTACCAGGTGTCCTCTGCGGAGCATATGCAGCCTTTCAAGGAAAACATGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS-3UTR CAA 90 bp | TGCCTAGAAAACATGAAGATTATGCAAGAGGTTCAGAGGAAAAGGTCTAGGAGGGGGCTGACTCTCCACTaGCAGCTGCAGGGGACCCCA | + |
|
Preference number: 5 (lower is better) Translates to: CLENMKIMQEVQRKRSRRGLTLH*QLQGTP Trigger: TGGGGTCCCCTGCAGCTGCAAGTGGAGAGTCAGCCC...CCTCCTAGACCTTTTCCTCTGAACCTCTTGCATAATCTTCATGTTTTCTAGGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS TCA 90 bp | TTGGAGGCTGTGCAACCTTCCCATGCAATACAAGAGCATCTAGACTaGCGTCTGCAGAGGCTGTCAATCCATTCTCAAGTCCTGAGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LEAVQPSHAIQEHLD*RLQRLSIHSQVLRG Trigger: GCCTCTCAGGACTTGAGAATGGATTGACAGCCTCTGCAGACGTCAGTCTAGATGCTCTTGTATTGCATGGGAAGGTTGCACAGCCTCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS CCA 90 bp | AGGAGAGGAGGAGGTGGTGGTAGTTGTGATGCACTCTGTATCTGTTaGGCATCCAGCTGTACTGATATTCTCCTTGGAGACACAATCAGA | + |
|
Preference number: 5 (lower is better) Translates to: RRGGGGGSCDALCIC*ASSCTDILLGDTIR Trigger: TCTGATTGTGTCTCCAAGGAGAATATCAGTACAGCTGGATGCCCAACAGATACAGAGTGCATCACAACTACCACCACCTCCTCCTCTCCT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS-3UTR CAA 90 bp | CCCTCCTTCATGTCAGGTGGATGCTGCGCAAGTTGTTTCAATGTCTTGTTTTCTCAGGCACCTTTCCCCTaGGTCAGGTTCTTTCTGATC | + |
|
Preference number: 5 (lower is better) Translates to: PSFMSGGCCASCFNVLFSQAPFP*VRFFLI Trigger: GATCAGAAAGAACCTGACCAAGGGGAAAGGTGCCTG...AGAAAACAAGACATTGAAACAACTTGCGCAGCATCCACCTGACATGAAGGAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS-3UTR CAA 90 bp | GCTGCAGACCAGTTTTTCATAGGGCTTCAAGGGAAATATCATAGAGAGCAACTTCCTCTGGTGGTGCCTTaGGAGGTGGCAATGTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: AADQFFIGLQGKYHREQLPLVVP*EVAMSG Trigger: TCCTGACATTGCCACCTCCAAAGGCACCACCAGAGG...AAGTTGCTCTCTATGATATTTCCCTTGAAGCCCTATGAAAAACTGGTCTGCAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS TCA 90 bp | TGGCAATGTCAGGATTCTACCTTCTTCTGTTGGGGAAGTCTGTATTaGTTTTGCCTCAAGAGTCCTTGGAGGCTGTGCAACCTTCCCATG | + |
|
Preference number: 5 (lower is better) Translates to: WQCQDSTFFCWGSLY*FCLKSPWRLCNLPM Trigger: CATGGGAAGGTTGCACAGCCTCCAAGGACTCTTGAGGCAAAATCAATACAGACTTCCCCAACAGAAGAAGGTAGAATCCTGACATTGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS CCA 90 bp | CATTACAGTTGTTTCCAAAGGAGGAGGAAACAGAATGTTCATGGCTaGTTTCTGACTCAGTATGCAGAGAAGGTTGGGAGGGCTGTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: HYSCFQRRRKQNVHG*FLTQYAEKVGRAVP Trigger: AGGGACAGCCCTCCCAACCTTCTCTGCATACTGAGTCAGAAACCAGCCATGAACATTCTGTTTCCTCCTCCTTTGGAAACAACTGTAATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS CCA 90 bp | GGGACATTACAGTTGTTTCCAAAGGAGGAGGAAACAGAATGTTCATaGCTGGTTTCTGACTCAGTATGCAGAGAAGGTTGGGAGGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: GTLQLFPKEEETECS*LVSDSVCREGWEGC Trigger: ACAGCCCTCCCAACCTTCTCTGCATACTGAGTCAGAAACCAGCCATGAACATTCTGTTTCCTCCTCCTTTGGAAACAACTGTAATGTCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS CCA 90 bp | AAAATGTGGACTGAAACAGGATACAGAAGACCCGCTCGGAGAAGTTaGGGATTAGCGACAGCTCATACAGGAACTGTTCAGGTTTGTCGA | + |
|
Preference number: 5 (lower is better) Translates to: KMWTETGYRRPARRS*GLATAHTGTVQVCR Trigger: TCGACAAACCTGAACAGTTCCTGTATGAGCTGTCGCTAATCCCCAACTTCTCCGAGCGGGTCTTCTGTATCCTGTTTCAGTCCACATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR CAA 90 bp | GTGTTCAATCTCCACAGGTCTACTGCTTTTGCCATTTTAAAGGCACATACAATAGACTTGCTCTTCTTCTaGCTGGTCTCCCCGCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: VFNLHRSTAFAILKAHTIDLLFF*LVSPLP Trigger: GGGCAGCGGGGAGACCAGCAAGAAGAAGAGCAAGTC...TATTGTATGTGCCTTTAAAATGGCAAAAGCAGTAGACCTGTGGAGATTGAACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR CAA 90 bp | TCCCTCCTTCATGTCAGGTGGATGCTGCGCAAGTTGTTTCAATGTCTTGTTTTCTTTCTGATCCGCAGGTaGGAAAACACCGAGGCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: SLLHVRWMLRKLFQCLVFFLIRR*ENTEAL Trigger: TAGAGCCTCGGTGTTTTCCAACCTGCGGATCAGAAA...GAAAACAAGACATTGAAACAACTTGCGCAGCATCCACCTGACATGAAGGAGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR CAA 90 bp | TGCCTAGAAAACATGAAGATTATGCAAGAGGTTCAGAGGAAAAGGTCTAGGAGGTCAGGCACCAGAGACTaGGTGGTCTCAGGCAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: CLENMKIMQEVQRKRSRRSGTRD*VVSGKS Trigger: TGACTTGCCTGAGACCACCAAGTCTCTGGTGCCTGA...CCTCCTAGACCTTTTCCTCTGAACCTCTTGCATAATCTTCATGTTTTCTAGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR CAA 90 bp | GATGGAGCTTCCTTCCCTCCTTCATGTCAGGTGGATGCTGCGCAAGTTGTTTCAACTGCTTGTGACCTTTaGTTGCTAAGCAACTTGACA | + |
|
Preference number: 5 (lower is better) Translates to: DGASFPPSCQVDAAQVVSTACDL*LLSNLT Trigger: TGTCAAGTTGCTTAGCAACAAAAGGTCACAAGCAGT...TGAAACAACTTGCGCAGCATCCACCTGACATGAAGGAGGGAAGGAAGCTCCATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR CAA 90 bp | GATGGAGCTTCCTTCCCTCCTTCATGTCAGGTGGATGCTGCGCAAGTTGTTTCACTAACTTGCGACGAATaGAGCAAATGCTCTCTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: DGASFPPSCQVDAAQVVSLTCDE*SKCSLK Trigger: TTTCAGAGAGCATTTGCTCAATTCGTCGCAAGTTAG...TGAAACAACTTGCGCAGCATCCACCTGACATGAAGGAGGGAAGGAAGCTCCATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS TCA 90 bp | TCTAACTTGCGACGAATTGAGCAAATGCTCTCTGAAAATGTGGACTaGAACAGGATACAGAAGACCCGCTCGGAGAAGTTGGGGATTAGC | + |
|
Preference number: 5 (lower is better) Translates to: SNLRRIEQMLSENVD*NRIQKTRSEKLGIS Trigger: GCTAATCCCCAACTTCTCCGAGCGGGTCTTCTGTATCCTGTTTCAGTCCACATTTTCAGAGAGCATTTGCTCAATTCGTCGCAAGTTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS GCA 90 bp | CCAAGTCCAGGGCTGGATATTGCTTCTCTAGCTCAGCTATTTTTGTaGGTAGATCCTCGATGGTCTGTTCCAGTTGCTGAATTACAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PSPGLDIASLAQLFL*VDPRWSVPVAELQL Trigger: CAACTGTAATTCAGCAACTGGAACAGACCATCGAGGATCTACGCACAAAAATAGCTGAGCTAGAGAAGCAATATCCAGCCCTGGACTTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR CAA 90 bp | GTGTTCAATCTCCACAGGTCTACTGCTTTTGCCATTTTAAAGGCACATACAATACTGCTGCTGCTGCTGTaGCAGACGAATTGCCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VFNLHRSTAFAILKAHTILLLLL*QTNCLL Trigger: CAGCAGGCAATTCGTCTGCAACAGCAGCAGCAGCAG...TATTGTATGTGCCTTTAAAATGGCAAAAGCAGTAGACCTGTGGAGATTGAACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR CAA 90 bp | ACAGTATTGCACATAGCGATCTTTGTTAAATGCCCTATTACTTCATTGAAGAGTATCCTAGGACTCTGGTaGGGGGACTGGGACGGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: TVLHIAIFVKCPITSLKSILGLW*GDWDGE Trigger: CTCCCCGTCCCAGTCCCCCAACCAGAGTCCTAGGAT...ACTCTTCAATGAAGTAATAGGGCATTTAACAAAGATCGCTATGTGCAATACTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR CAA 90 bp | AGACGTGCCACTTGGGTCTGTTGGTATAACACCACAATGTTTACAAAAAGGAAACATCGAATGTGTGGGTaGACTAACCGCAGCCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: RRATWVCWYNTTMFTKRKHRMCG*TNRSPG Trigger: ACCTGGGCTGCGGTTAGTCAACCCACACATTCGATG...TTTCCTTTTTGTAAACATTGTGGTGTTATACCAACAGACCCAAGTGGCACGTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR CAA 90 bp | AGACGTGCCACTTGGGTCTGTTGGTATAACACCACAATGTTTACAAAAAGGAAATTGCCTCAAGAGTCCTaGGAGGCTGTGCAACCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RRATWVCWYNTTMFTKRKLPQES*EAVQPS Trigger: GGAAGGTTGCACAGCCTCCAAGGACTCTTGAGGCAA...TTTCCTTTTTGTAAACATTGTGGTGTTATACCAACAGACCCAAGTGGCACGTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR CAA 90 bp | TCATCATGTTCAGAATTTATGCAGATAGTGCCTCTTAGACGTGCCACTTGGGTCATTCTCATAGAGAGCTaGAAGGGTCTCCAGGTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: SSCSEFMQIVPLRRATWVILIES*KGLQVH Trigger: GTGGACCTGGAGACCCTTCAAGCTCTCTATGAGAAT...GACCCAAGTGGCACGTCTAAGAGGCACTATCTGCATAAATTCTGAACATGATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR CAA 90 bp | GATGGAGCTTCCTTCCCTCCTTCATGTCAGGTGGATGCTGCGCAAGTTGTTTCATGTAGCAATTCTAACTaGCGACGAATTGAGCAAATG | + |
|
Preference number: 5 (lower is better) Translates to: DGASFPPSCQVDAAQVVSCSNSN*RRIEQM Trigger: CATTTGCTCAATTCGTCGCAAGTTAGAATTGCTACA...TGAAACAACTTGCGCAGCATCCACCTGACATGAAGGAGGGAAGGAAGCTCCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR CAA 90 bp | TGCCTAGAAAACATGAAGATTATGCAAGAGGTTCAGAGGAAAAGGTCTAGGAGGCTGTTGTCGCTGCTTTaGACATCCTTCAGCTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: CLENMKIMQEVQRKRSRRLLSLL*TSFSLG Trigger: GCCCAAGCTGAAGGATGTCAAAAGCAGCGACAACAG...CCTCCTAGACCTTTTCCTCTGAACCTCTTGCATAATCTTCATGTTTTCTAGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR CAA 90 bp | TATCATAGAGAGCAACTTAAGCATGGGAGAGGTATGAATCATGACATATTGATGGGTCCTTTGTCCATCTaGCGCTCCAGCCGCAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: YHREQLKHGRGMNHDILMGPLSI*RSSRSF Trigger: GAAACTGCGGCTGGAGCGCAAGATGGACAAAGGACC...CATCAATATGTCATGATTCATACCTCTCCCATGCTTAAGTTGCTCTCTATGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR CAA 90 bp | CCCTCCTTCATGTCAGGTGGATGCTGCGCAAGTTGTTTCAATGTCTTGTTTTCTTTGACATCCTTCAGCTaGGGCAAAATGTCTAGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PSFMSGGCCASCFNVLFSLTSFS*GKMSSP Trigger: TGGACTAGACATTTTGCCCAAGCTGAAGGATGTCAA...AGAAAACAAGACATTGAAACAACTTGCGCAGCATCCACCTGACATGAAGGAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS TCA 90 bp | GGTCTCCAAAAAGCATTTATGAGTCTCTGTCAGGGCAGCCTCCTGTaGCTCTTGGTCAATTTTAGCTTGACTGATAAACTGCTCCATGTT | + |
|
Preference number: 5 (lower is better) Translates to: GLQKAFMSLCQGSLL*LLVNFSLTDKLLHV Trigger: AACATGGAGCAGTTTATCAGTCAAGCTAAAATTGACCAAGAGTCACAGGAGGCTGCCCTGACAGAGACTCATAAATGCTTTTTGGAGACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR CAA 90 bp | TCATCATGTTCAGAATTTATGCAGATAGTGCCTCTTAGACGTGCCACTTGGGTCGTTGCTGAATTACAGTaGCCTGTCCTTCAGACTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SSCSEFMQIVPLRRATWVVAELQ*PVLQTS Trigger: TGAAGTCTGAAGGACAGGCAACTGTAATTCAGCAAC...GACCCAAGTGGCACGTCTAAGAGGCACTATCTGCATAAATTCTGAACATGATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR CAA 90 bp | GCTGCAGACCAGTTTTTCATAGGGCTTCAAGGGAAATATCATAGAGAGCAACTTGGTGGGACATTACAGTaGTTTCCAAAGGAGGAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: AADQFFIGLQGKYHREQLGGTLQ*FPKEEE Trigger: TTCCTCCTCCTTTGGAAACAACTGTAATGTCCCACC...AAGTTGCTCTCTATGATATTTCCCTTGAAGCCCTATGAAAAACTGGTCTGCAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR CAA 90 bp | TGCCTAGAAAACATGAAGATTATGCAAGAGGTTCAGAGGAAAAGGTCTAGGAGGGGTTTGTCGAGAGACTaGGCGTTTTCCTTGTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: CLENMKIMQEVQRKRSRRGLSRD*AFSLSL Trigger: CAAAGACAAGGAAAACGCCAAGTCTCTCGACAAACC...CCTCCTAGACCTTTTCCTCTGAACCTCTTGCATAATCTTCATGTTTTCTAGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR CAA 90 bp | TCATGTCAGGTGGATGCTGCGCAAGTTGTTTCAATGTCTTGTTTTCTTCTGCTGAAGACACACTGCTCTTaGCCAGCATCCTCATCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: SCQVDAAQVVSMSCFLLLKTHCS*PASSSK Trigger: TTTTGATGAGGATGCTGGCAAAGAGCAGTGTGTCTT...CAGCAGAAGAAAACAAGACATTGAAACAACTTGCGCAGCATCCACCTGACATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS CCA 90 bp | TTAGCGACAGCTCATACAGGAACTGTTCAGGTTTGTCGAGAGACTTaGCGTTTTCCTTGTCTTTGGAAGATCGACTGTGCTTTTCAATTT | + |
|
Preference number: 5 (lower is better) Translates to: LATAHTGTVQVCRET*RFPCLWKIDCAFQF Trigger: AAATTGAAAAGCACAGTCGATCTTCCAAAGACAAGGAAAACGCCAAGTCTCTCGACAAACCTGAACAGTTCCTGTATGAGCTGTCGCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030039.13 ENSMUST00000195621.2 |
||
| CDS-3UTR CAA 90 bp | GTGTTCAATCTCCACAGGTCTACTGCTTTTGCCATTTTAAAGGCACATACAATAGCTCTAGAATCGGACTaGCTCTTCTTCTTGCTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: VFNLHRSTAFAILKAHTIALESD*LFFLLV Trigger: GACCAGCAAGAAGAAGAGCAAGTCCGATTCTAGAGC...TATTGTATGTGCCTTTAAAATGGCAAAAGCAGTAGACCTGTGGAGATTGAACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR CAA 90 bp | TGCCTAGAAAACATGAAGATTATGCAAGAGGTTCAGAGGAAAAGGTCTAGGAGGGCGTTTTCCTTGTCTTaGGAAGATCGACTGTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: CLENMKIMQEVQRKRSRRAFSLS*EDRLCF Trigger: AAAGCACAGTCGATCTTCCAAAGACAAGGAAAACGC...CCTCCTAGACCTTTTCCTCTGAACCTCTTGCATAATCTTCATGTTTTCTAGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR CAA 90 bp | ACAGTATTGCACATAGCGATCTTTGTTAAATGCCCTATTACTTCATTGAAGAGTAATAGAGAGGCTTCATaGGCCGGCAAGGCTCGATCA | + |
|
Preference number: 5 (lower is better) Translates to: TVLHIAIFVKCPITSLKSNREAS*AGKARS Trigger: TGATCGAGCCTTGCCGGCCAATGAAGCCTCTCTATT...ACTCTTCAATGAAGTAATAGGGCATTTAACAAAGATCGCTATGTGCAATACTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR CAA 90 bp | TGCCTAGAAAACATGAAGATTATGCAAGAGGTTCAGAGGAAAAGGTCTAGGAGGGCTTGTGACCTTTTGTaGCTAAGCAACTTGACAACT | + |
|
Preference number: 5 (lower is better) Translates to: CLENMKIMQEVQRKRSRRACDLL*LSNLTT Trigger: AGTTGTCAAGTTGCTTAGCAACAAAAGGTCACAAGC...CCTCCTAGACCTTTTCCTCTGAACCTCTTGCATAATCTTCATGTTTTCTAGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR CAA 90 bp | GTGTTCAATCTCCACAGGTCTACTGCTTTTGCCATTTTAAAGGCACATACAATATGCTCCATGTTTTCCTaGAAAGGCTGCATATGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VFNLHRSTAFAILKAHTICSMFS*KGCICS Trigger: GGAGCATATGCAGCCTTTCAAGGAAAACATGGAGCA...TATTGTATGTGCCTTTAAAATGGCAAAAGCAGTAGACCTGTGGAGATTGAACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR CAA 90 bp | TCATCATGTTCAGAATTTATGCAGATAGTGCCTCTTAGACGTGCCACTTGGGTCTTCTTTGACTCTCTCTaGCAGAATCAGTTTGTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SSCSEFMQIVPLRRATWVFFDSL*QNQFVL Trigger: GAGAACAAACTGATTCTGCAAGAGAGAGTCAAAGAA...GACCCAAGTGGCACGTCTAAGAGGCACTATCTGCATAAATTCTGAACATGATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR CAA 90 bp | GTCTGTTGGTATAACACCACAATGTTTACAAAAAGGAAAGGTGTTCAATCTCCACTAGCTCAGCTATTTTaGTGCGTAGATCCTCGATGG | + |
|
Preference number: 5 (lower is better) Translates to: VCWYNTTMFTKRKGVQSPLAQLF*CVDPRW Trigger: CCATCGAGGATCTACGCACAAAAATAGCTGAGCTAG...TGGAGATTGAACACCTTTCCTTTTTGTAAACATTGTGGTGTTATACCAACAGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR CAA 90 bp | TATCATAGAGAGCAACTTAAGCATGGGAGAGGTATGAATCATGACATATTGATGGACTTGGCGTTTTCCTaGTCTTTGGAAGATCGACTG | + |
|
Preference number: 5 (lower is better) Translates to: YHREQLKHGRGMNHDILMDLAFS*SLEDRL Trigger: CAGTCGATCTTCCAAAGACAAGGAAAACGCCAAGTC...CATCAATATGTCATGATTCATACCTCTCCCATGCTTAAGTTGCTCTCTATGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR CAA 90 bp | TATCATAGAGAGCAACTTAAGCATGGGAGAGGTATGAATCATGACATATTGATGAGGAACTGTTCAGGTTaGTCGAGAGACTTGGCGTTT | + |
|
Preference number: 5 (lower is better) Translates to: YHREQLKHGRGMNHDILMRNCSG*SRDLAF Trigger: AAACGCCAAGTCTCTCGACAAACCTGAACAGTTCCT...CATCAATATGTCATGATTCATACCTCTCCCATGCTTAAGTTGCTCTCTATGATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR CAA 90 bp | CTTAAGCATGGGAGAGGTATGAATCATGACATATTGATGGTATTTACTTCTCAAGATGGTCTGTTCCAGTaGCTGAATTACAGTTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LKHGRGMNHDILMVFTSQDGLFQ*LNYSCL Trigger: CAGGCAACTGTAATTCAGCAACTGGAACAGACCATC...TTGAGAAGTAAATACCATCAATATGTCATGATTCATACCTCTCCCATGCTTAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR CAA 90 bp | ACAGTATTGCACATAGCGATCTTTGTTAAATGCCCTATTACTTCATTGAAGAGTAAAAGGCTTCTGCTGTaGTCGCTGCTTTTGACATCC | + |
|
Preference number: 5 (lower is better) Translates to: TVLHIAIFVKCPITSLKSKRLLL*SLLLTS Trigger: GGATGTCAAAAGCAGCGACAACAGCAGAAGCCTTTT...ACTCTTCAATGAAGTAATAGGGCATTTAACAAAGATCGCTATGTGCAATACTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR CAA 90 bp | GTCTGTTGGTATAACACCACAATGTTTACAAAAAGGAAAGGTGTTCAATCTCCAAAGTCTGTATTGATTTaGCCTCAAGAGTCCTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: VCWYNTTMFTKRKGVQSPKSVLI*PQESLE Trigger: CTCCAAGGACTCTTGAGGCAAAATCAATACAGACTT...TGGAGATTGAACACCTTTCCTTTTTGTAAACATTGTGGTGTTATACCAACAGAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR CAA 90 bp | GTGTTCAATCTCCACAGGTCTACTGCTTTTGCCATTTTAAAGGCACATACAATATTCTACCTTCTTCTGTaGGGGAAGTCTGTATTGATT | + |
|
Preference number: 5 (lower is better) Translates to: VFNLHRSTAFAILKAHTIFYLLL*GKSVLI Trigger: AATCAATACAGACTTCCCCAACAGAAGAAGGTAGAA...TATTGTATGTGCCTTTAAAATGGCAAAAGCAGTAGACCTGTGGAGATTGAACAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS-3UTR CAA 90 bp | CTTAAGCATGGGAGAGGTATGAATCATGACATATTGATGGTATTTACTTCTCAATTGTTGCTAAGCAACTaGACAACTTGTTTGGCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LKHGRGMNHDILMVFTSQLLLSN*TTCLAF Trigger: AAAGGCCAAACAAGTTGTCAAGTTGCTTAGCAACAA...TTGAGAAGTAAATACCATCAATATGTCATGATTCATACCTCTCCCATGCTTAAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS TCA 72 bp | GTGAGCGCTGTCCAGCTCCCCAATCGGCAGGGCCTGTaGGTCCAGCACATCCTCTCGCGAGTCGCAGGCACC | + |
|
Preference number: 6 (lower is better) Translates to: VSAVQLPNRQGL*VQHILSRVAGT Trigger: GGTGCCTGCGACTCGCGAGAGGATGTGCTGGACTCACAGGCCCTGCCGATTGGGGAGCTGGACAGCGCTCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS CCA 72 bp | GAAAGCCATCAGCTGTCGCTGGAGCCCCAGGTGCCTTaGCGGCCAGTACAGGGGACCCGCCACCACTGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: ESHQLSLEPQVP*RPVQGTRHHCH Trigger: ATGACAGTGGTGGCGGGTCCCCTGTACTGGCCGCCAAGGCACCTGGGGCTCCAGCGACAGCTGATGGCTTTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS TCA 72 bp | TGCCAAGCGCCTTTTTGCTCCCGCTCGCCTTCTTTGTaGTTTCCGCATCCCTGGGCCCCGCGGCATCCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: CQAPFCSRSPSL*FPHPWAPRHPR Trigger: CCGAGGATGCCGCGGGGCCCAGGGATGCGGAAATCACAAAGAAGGCGAGCGGGAGCAAAAAGGCGCTTGGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS TCA 72 bp | GAGAGGCTGAGGTCCGGGGTCTTGGTGACTATAGAGTaGGCGCTGTCCAGCTCCCCAATCGGCAGGGCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: ERLRSGVLVTIE*ALSSSPIGRAC Trigger: ACAGGCCCTGCCGATTGGGGAGCTGGACAGCGCTCACTCTATAGTCACCAAGACCCCGGACCTCAGCCTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS GCA 72 bp | TGGGCTGGGCGCAGGGCTTCCAGGCAAAGAAACGACTaGGGAGGTAATGGATTCTCGCATGCCCTCCTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: WAGRRASRQRND*GGNGFSHALLR Trigger: CCGGAGGAGGGCATGCGAGAATCCATTACCTCCGCAGTCGTTTCTTTGCCTGGAAGCCCTGCGCCCAGCCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS CCA 72 bp | CCCTGTGAACACGTTCTGAAAGCCATCAGCTGTCGCTaGAGCCCCAGGTGCCTTGGCGGCCAGTACAGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: PCEHVLKAISCR*SPRCLGGQYRG Trigger: TCCCCTGTACTGGCCGCCAAGGCACCTGGGGCTCCAGCGACAGCTGATGGCTTTCAGAACGTGTTCACAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
||
| CDS GCA 72 bp | GTCTCGGAGGTCAAGTGGCTTCCGGAGGACGGAGGATaGTCAGGCACCAGAGACTTGGTGGTCTCAGGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: VSEVKWLPEDGG*SGTRDLVVSGK Trigger: CTTGCCTGAGACCACCAAGTCTCTGGTGCCTGAGCATCCTCCGTCCTCCGGAAGCCACTTGACCTCCGAGAC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS CCA 72 bp | CCTACCCCAGCCTCAGCAGGCCTAGAAGCACCGGGATaGATCACCTCGAAAGGGTCAGCACACTCGGTATCC | + |
|
Preference number: 6 (lower is better) Translates to: PTPASAGLEAPG*ITSKGSAHSVS Trigger: GGATACCGAGTGTGCTGACCCTTTCGAGGTGATCCATCCCGGTGCTTCTAGGCCTGCTGAGGCTGGGGTAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS CCA 72 bp | CGGAGGACGGAGGATGCTCAGGCACCAGAGACTTGGTaGTCTCAGGCAAGTCAGGTCTCACCGGTAGTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: RRTEDAQAPETW*SQASQVSPVVP Trigger: AGGCACTACCGGTGAGACCTGACTTGCCTGAGACCACCAAGTCTCTGGTGCCTGAGCATCCTCCGTCCTCCG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS CCA 72 bp | GCAGGGGGTGATGAGTGGGTAAGGTTTGAAGCAGCGTaGGCTGGGCGCAGGGCTTCCAGGCAAAGAAACGAC | + |
|
Preference number: 6 (lower is better) Translates to: AGGDEWVRFEAA*AGRRASRQRND Trigger: GTCGTTTCTTTGCCTGGAAGCCCTGCGCCCAGCCCACGCTGCTTCAAACCTTACCCACTCATCACCCCCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS CCA 72 bp | CCGAGTGGTGGTCTTGATGTAGCAGGGGGTGATGAGTaGGTAAGGTTTGAAGCAGCGTGGGCTGGGCGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PSGGLDVAGGDE*VRFEAAWAGRR Trigger: CCTGCGCCCAGCCCACGCTGCTTCAAACCTTACCCACTCATCACCCCCTGCTACATCAAGACCACCACTCGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS CAA 72 bp | CTTCCGGAGGACGGAGGATGCTCAGGCACCAGAGACTaGGTGGTCTCAGGCAAGTCAGGTCTCACCGGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: LPEDGGCSGTRD*VVSGKSGLTGS Trigger: ACTACCGGTGAGACCTGACTTGCCTGAGACCACCAAGTCTCTGGTGCCTGAGCATCCTCCGTCCTCCGGAAG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS CAA 90 bp | GTCAAGTGGCTTCCGGAGGACGGAGGATGCTCAGGCACCAGAGACTaGGTGGTCTCAGGCAAGTCAGGTCTCACCGGTAGTGCCTGTACT | + |
|
Preference number: 6 (lower is better) Translates to: VKWLPEDGGCSGTRD*VVSGKSGLTGSACT Trigger: AGTACAGGCACTACCGGTGAGACCTGACTTGCCTGAGACCACCAAGTCTCTGGTGCCTGAGCATCCTCCGTCCTCCGGAAGCCACTTGAC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS CAA 90 bp | TTGTCTGAGGTCCAGAGGGTGAGGTTAGAAGGGCTGACTCTCCACTaGCAGCTGCAGGGGACCCCAGAAGACCCTCTGGTGGTGCCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: LSEVQRVRLEGLTLH*QLQGTPEDPLVVPL Trigger: CAAAGGCACCACCAGAGGGTCTTCTGGGGTCCCCTGCAGCTGCAAGTGGAGAGTCAGCCCTTCTAACCTCACCCTCTGGACCTCAGACAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS CAA 90 bp | TGTGAGTCCAGCACATCCTCTCGCGAGTCGCAGGCACCTTTCCCCTaGGTCAGGTTCTTTCTGATCCGCAGGTTGGAAAACACCGAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: CESSTSSRESQAPFP*VRFFLIRRLENTEA Trigger: AGCCTCGGTGTTTTCCAACCTGCGGATCAGAAAGAACCTGACCAAGGGGAAAGGTGCCTGCGACTCGCGAGAGGATGTGCTGGACTCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS GCA 72 bp | TCCGTGTCTGAACCAGAACTGGTCCTTTGTCCATCTTaGGCTCCAGCCGCAGTTTCCAAATCCTCCGCGGTC | + |
|
Preference number: 6 (lower is better) Translates to: SVSEPELVLCPS*APAAVSKSSAV Trigger: GACCGCGGAGGATTTGGAAACTGCGGCTGGAGCGCAAGATGGACAAAGGACCAGTTCTGGTTCAGACACGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS TCA 72 bp | CTCCGTAGCGGAGTGGAAGCTGTAGATGTCCGTGTCTaGACCAGAACTGGTCCTTTGTCCATCTTGCGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LRSGVEAVDVRV*TRTGPLSILRS Trigger: GGAGCGCAAGATGGACAAAGGACCAGTTCTGGTTCAGACACGGACATCTACAGCTTCCACTCCGCTACGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS TCA 72 bp | CTGCTGCTGTTGCAGACGAATTGCCTGCTGGATGTCTaGGAGCAAATCCTCCTGCTCCGTAGCGGAGTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: LLLLQTNCLLDV*EQILLLRSGVE Trigger: TTCCACTCCGCTACGGAGCAGGAGGATTTGCTCTCAGACATCCAGCAGGCAATTCGTCTGCAACAGCAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS CCA 72 bp | GGACCCCAGAAGACCCTCTGGTGGTGCCTTTGGAGGTaGCAATGTCAGGATTCTACCTTCTTCTGTTGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: GPQKTLWWCLWR*QCQDSTFFCWG Trigger: TCCCCAACAGAAGAAGGTAGAATCCTGACATTGCCACCTCCAAAGGCACCACCAGAGGGTCTTCTGGGGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS CCA 72 bp | TCCTTGAAAGGCTGCATATGCTCCGCAGAGGACACCTaGTACACTTTACCGGCTTCCGCCTCACAGGCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: SLKGCICSAEDT*YTLPASASQAF Trigger: GAAAGCCTGTGAGGCGGAAGCCGGTAAAGTGTACCAGGTGTCCTCTGCGGAGCATATGCAGCCTTTCAAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS TCA 72 bp | GTCCTTGGGACTGGGCTCTTCCTCAGGAAGCTTGGATaGTGGCCACATAGATGGTTCTCTCCTGGGAAACTG | + |
|
Preference number: 6 (lower is better) Translates to: VLGTGLFLRKLG*WPHRWFSPGKL Trigger: CAGTTTCCCAGGAGAGAACCATCTATGTGGCCATCATCCAAGCTTCCTGAGGAAGAGCCCAGTCCCAAGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS CCA 72 bp | AGGCTGTCAATCCATTCTCAAGTCCTGAGAGGCCTCTaGGTCCCTCCAAGTCCAGGGCTGGATATTGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: RLSIHSQVLRGL*VPPSPGLDIAS Trigger: AGAAGCAATATCCAGCCCTGGACTTGGAGGGACCCAGAGGCCTCTCAGGACTTGAGAATGGATTGACAGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS CCA 72 bp | AGTGGAAGCTGTAGATGTCCGTGTCTGAACCAGAACTaGTCCTTTGTCCATCTTGCGCTCCAGCCGCAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: SGSCRCPCLNQN*SFVHLALQPQF Trigger: AAACTGCGGCTGGAGCGCAAGATGGACAAAGGACCAGTTCTGGTTCAGACACGGACATCTACAGCTTCCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS CAA 72 bp | CCTTTCCCCTTGGTCAGGTTCTTTCTGATCCGCAGGTaGGAAAACACCGAGGCTCTAGAATCGGACTTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: PFPLVRFFLIRR*ENTEALESDLL Trigger: GAGCAAGTCCGATTCTAGAGCCTCGGTGTTTTCCAACCTGCGGATCAGAAAGAACCTGACCAAGGGGAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS CAA 90 bp | TCGCAGGCACCTTTCCCCTTGGTCAGGTTCTTTCTGATCCGCAGGTaGGAAAACACCGAGGCTCTAGAATCGGACTTGCTCTTCTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SQAPFPLVRFFLIRR*ENTEALESDLLFFL Trigger: CAAGAAGAAGAGCAAGTCCGATTCTAGAGCCTCGGTGTTTTCCAACCTGCGGATCAGAAAGAACCTGACCAAGGGGAAAGGTGCCTGCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS CAA 90 bp | TCTCCTGGGAAACTGCCCTTCGCTGTAATCCATCGAATGTGTGGGTaGACTAACCGCAGCCCAGGTGTAAAGCTGATCTTGATCAAATGG | + |
|
Preference number: 6 (lower is better) Translates to: SPGKLPFAVIHRMCG*TNRSPGVKLILIKW Trigger: CCATTTGATCAAGATCAGCTTTACACCTGGGCTGCGGTTAGTCAACCCACACATTCGATGGATTACAGCGAAGGGCAGTTTCCCAGGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS TCA 72 bp | AGCCCAGGTGTAAAGCTGATCTTGATCAAATGGAGCTaGACTGGACCCAGCGTTCTGATTACACGGTTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: SPGVKLILIKWS*TGPSVLITRFP Trigger: AGGGAACCGTGTAATCAGAACGCTGGGTCCAGTTCAGCTCCATTTGATCAAGATCAGCTTTACACCTGGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS CAA 72 bp | AAACTGCCCTTCGCTGTAATCCATCGAATGTGTGGGTaGACTAACCGCAGCCCAGGTGTAAAGCTGATCTTG | + |
|
Preference number: 6 (lower is better) Translates to: KLPFAVIHRMCG*TNRSPGVKLIL Trigger: CAAGATCAGCTTTACACCTGGGCTGCGGTTAGTCAACCCACACATTCGATGGATTACAGCGAAGGGCAGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS TCA 72 bp | GTGCAACCTTCCCATGCAATACAAGAGCATCTAGACTaGCGTCTGCAGAGGCTGTCAATCCATTCTCAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: VQPSHAIQEHLD*RLQRLSIHSQV Trigger: GACTTGAGAATGGATTGACAGCCTCTGCAGACGTCAGTCTAGATGCTCTTGTATTGCATGGGAAGGTTGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS GCA 72 bp | CCTGGGGTTCTGCCAGCGGGAAGACACACTGCTCTTTaGCAGCATCCTCATCAAAATTTCGAAGATAATATG | + |
|
Preference number: 6 (lower is better) Translates to: PGVLPAGRHTAL*QHPHQNFEDNM Trigger: CATATTATCTTCGAAATTTTGATGAGGATGCTGGCAAAGAGCAGTGTGTCTTCCCGCTGGCAGAACCCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS CAA 72 bp | CCAGGGCTGGATATTGCTTCTCTAGCTCAGCTATTTTaGTGCGTAGATCCTCGATGGTCTGTTCCAGTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: PGLDIASLAQLF*CVDPRWSVPVA Trigger: AGCAACTGGAACAGACCATCGAGGATCTACGCACAAAAATAGCTGAGCTAGAGAAGCAATATCCAGCCCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS CAA 90 bp | TTGTGCGTAGATCCTCGATGGTCTGTTCCAGTTGCTGAATTACAGTaGCCTGTCCTTCAGACTTCACATCGAAAACTTCCTGCTGGACAC | + |
|
Preference number: 6 (lower is better) Translates to: LCVDPRWSVPVAELQ*PVLQTSHRKLPAGH Trigger: GTGTCCAGCAGGAAGTTTTCGATGTGAAGTCTGAAGGACAGGCAACTGTAATTCAGCAACTGGAACAGACCATCGAGGATCTACGCACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS CAA 90 bp | CCTCCAAGTCCAGGGCTGGATATTGCTTCTCTAGCTCAGCTATTTTaGTGCGTAGATCCTCGATGGTCTGTTCCAGTTGCTGAATTACAG | + |
|
Preference number: 6 (lower is better) Translates to: PPSPGLDIASLAQLF*CVDPRWSVPVAELQ Trigger: CTGTAATTCAGCAACTGGAACAGACCATCGAGGATCTACGCACAAAAATAGCTGAGCTAGAGAAGCAATATCCAGCCCTGGACTTGGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS CAA 90 bp | CTTCTTCTGTTGGGGAAGTCTGTATTGATTTTGCCTCAAGAGTCCTaGGAGGCTGTGCAACCTTCCCATGCAATACAAGAGCATCTAGAC | + |
|
Preference number: 6 (lower is better) Translates to: LLLLGKSVLILPQES*EAVQPSHAIQEHLD Trigger: GTCTAGATGCTCTTGTATTGCATGGGAAGGTTGCACAGCCTCCAAGGACTCTTGAGGCAAAATCAATACAGACTTCCCCAACAGAAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS TCA 72 bp | CAGGATTCTACCTTCTTCTGTTGGGGAAGTCTGTATTaGTTTTGCCTCAAGAGTCCTTGGAGGCTGTGCAAC | + |
|
Preference number: 6 (lower is better) Translates to: QDSTFFCWGSLY*FCLKSPWRLCN Trigger: GTTGCACAGCCTCCAAGGACTCTTGAGGCAAAATCAATACAGACTTCCCCAACAGAAGAAGGTAGAATCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS TCA 72 bp | CGACGAATTGAGCAAATGCTCTCTGAAAATGTGGACTaGAACAGGATACAGAAGACCCGCTCGGAGAAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: RRIEQMLSENVD*NRIQKTRSEKL Trigger: CAACTTCTCCGAGCGGGTCTTCTGTATCCTGTTTCAGTCCACATTTTCAGAGAGCATTTGCTCAATTCGTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS GCA 72 bp | GGGCTGGATATTGCTTCTCTAGCTCAGCTATTTTTGTaGGTAGATCCTCGATGGTCTGTTCCAGTTGCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: GLDIASLAQLFL*VDPRWSVPVAE Trigger: TTCAGCAACTGGAACAGACCATCGAGGATCTACGCACAAAAATAGCTGAGCTAGAGAAGCAATATCCAGCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS CCA 72 bp | GCTCATACAGGAACTGTTCAGGTTTGTCGAGAGACTTaGCGTTTTCCTTGTCTTTGGAAGATCGACTGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: AHTGTVQVCRET*RFPCLWKIDCA Trigger: AGCACAGTCGATCTTCCAAAGACAAGGAAAACGCCAAGTCTCTCGACAAACCTGAACAGTTCCTGTATGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030039.13 ENSMUST00000195621.2 |
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| CDS CAA 72 bp | TTGGGGAAGTCTGTATTGATTTTGCCTCAAGAGTCCTaGGAGGCTGTGCAACCTTCCCATGCAATACAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: LGKSVLILPQES*EAVQPSHAIQE Trigger: CTCTTGTATTGCATGGGAAGGTTGCACAGCCTCCAAGGACTCTTGAGGCAAAATCAATACAGACTTCCCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS CAA 72 bp | AGCTCATACAGGAACTGTTCAGGTTTGTCGAGAGACTaGGCGTTTTCCTTGTCTTTGGAAGATCGACTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: SSYRNCSGLSRD*AFSLSLEDRLC Trigger: GCACAGTCGATCTTCCAAAGACAAGGAAAACGCCAAGTCTCTCGACAAACCTGAACAGTTCCTGTATGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030039.13 ENSMUST00000195621.2 |
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| CDS CAA 72 bp | GGGATTAGCGACAGCTCATACAGGAACTGTTCAGGTTaGTCGAGAGACTTGGCGTTTTCCTTGTCTTTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: GISDSSYRNCSG*SRDLAFSLSLE Trigger: TTCCAAAGACAAGGAAAACGCCAAGTCTCTCGACAAACCTGAACAGTTCCTGTATGAGCTGTCGCTAATCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030039.13 ENSMUST00000195621.2 |
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| CDS TCA 72 bp | AGGGCAGCCTCCTGTGACTCTTGGTCAATTTTAGCTTaGCTGATAAACTGCTCCATGTTTTCCTTGAAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: RAASCDSWSILA*LINCSMFSLKG Trigger: GCCTTTCAAGGAAAACATGGAGCAGTTTATCAGTCAAGCTAAAATTGACCAAGAGTCACAGGAGGCTGCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS CAA 72 bp | TCCAAAATAGAGGATTTAGGTTCTGTATCAACGTCCTaGGGACTGGGCTCTTCCTCAGGAAGCTTGGATGAT | + |
|
Preference number: 6 (lower is better) Translates to: SKIEDLGSVSTS*GLGSSSGSLDD Trigger: ATCATCCAAGCTTCCTGAGGAAGAGCCCAGTCCCAAGGACGTTGATACAGAACCTAAATCCTCTATTTTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS CAA 90 bp | ATTAGCGACAGCTCATACAGGAACTGTTCAGGTTTGTCGAGAGACTaGGCGTTTTCCTTGTCTTTGGAAGATCGACTGTGCTTTTCAATT | + |
|
Preference number: 6 (lower is better) Translates to: ISDSSYRNCSGLSRD*AFSLSLEDRLCFSI Trigger: AATTGAAAAGCACAGTCGATCTTCCAAAGACAAGGAAAACGCCAAGTCTCTCGACAAACCTGAACAGTTCCTGTATGAGCTGTCGCTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030039.13 ENSMUST00000195621.2 |
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| CDS CAA 72 bp | ATATATGACAAAAGGCTTCTGCTGTTGTCGCTGCTTTaGACATCCTTCAGCTTGGGCAAAATGTCTAGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: IYDKRLLLLSLL*TSFSLGKMSSP Trigger: TGGACTAGACATTTTGCCCAAGCTGAAGGATGTCAAAAGCAGCGACAACAGCAGAAGCCTTTTGTCATATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS CAA 72 bp | CTAGACATTAGAATTCCTACTGCTTGTGACCTTTTGTaGCTAAGCAACTTGACAACTTGTTTGGCCTTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: LDIRIPTACDLL*LSNLTTCLAFV Trigger: GACAAAGGCCAAACAAGTTGTCAAGTTGCTTAGCAACAAAAGGTCACAAGCAGTAGGAATTCTAATGTCTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS CAA 72 bp | AACTGTTCAGGTTTGTCGAGAGACTTGGCGTTTTCCTaGTCTTTGGAAGATCGACTGTGCTTTTCAATTTTT | + |
|
Preference number: 6 (lower is better) Translates to: NCSGLSRDLAFS*SLEDRLCFSIF Trigger: AAAAATTGAAAAGCACAGTCGATCTTCCAAAGACAAGGAAAACGCCAAGTCTCTCGACAAACCTGAACAGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030039.13 ENSMUST00000195621.2 |
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| CDS CAA 90 bp | TTAAGGTCTCACACAGTTTTTGTAGCAATTCTAACTTGCGACGAATaGAGCAAATGCTCTCTGAAAATGTGGACTGAAACAGGATACAGA | + |
|
Preference number: 6 (lower is better) Translates to: LRSHTVFVAILTCDE*SKCSLKMWTETGYR Trigger: TCTGTATCCTGTTTCAGTCCACATTTTCAGAGAGCATTTGCTCAATTCGTCGCAAGTTAGAATTGCTACAAAAACTGTGTGAGACCTTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS CAA 72 bp | ATTCCTACTGCTTGTGACCTTTTGTTGCTAAGCAACTaGACAACTTGTTTGGCCTTTGTCTTTGAAATTGTG | + |
|
Preference number: 6 (lower is better) Translates to: IPTACDLLLLSN*TTCLAFVFEIV Trigger: CACAATTTCAAAGACAAAGGCCAAACAAGTTGTCAAGTTGCTTAGCAACAAAAGGTCACAAGCAGTAGGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS CAA 72 bp | AGACTAGACATTAGAATTCCTACTGCTTGTGACCTTTaGTTGCTAAGCAACTTGACAACTTGTTTGGCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: RLDIRIPTACDL*LLSNLTTCLAF Trigger: AAAGGCCAAACAAGTTGTCAAGTTGCTTAGCAACAAAAGGTCACAAGCAGTAGGAATTCTAATGTCTAGTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS CAA 72 bp | TTTAAGGTCTCACACAGTTTTTGTAGCAATTCTAACTaGCGACGAATTGAGCAAATGCTCTCTGAAAATGTG | + |
|
Preference number: 6 (lower is better) Translates to: FKVSHSFCSNSN*RRIEQMLSENV Trigger: CACATTTTCAGAGAGCATTTGCTCAATTCGTCGCAAGTTAGAATTGCTACAAAAACTGTGTGAGACCTTAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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| CDS CAA 90 bp | GACATTAGAATTCCTACTGCTTGTGACCTTTTGTTGCTAAGCAACTaGACAACTTGTTTGGCCTTTGTCTTTGAAATTGTGTCAGAAATA | + |
|
Preference number: 6 (lower is better) Translates to: DIRIPTACDLLLLSN*TTCLAFVFEIVSEI Trigger: TATTTCTGACACAATTTCAAAGACAAAGGCCAAACAAGTTGTCAAGTTGCTTAGCAACAAAAGGTCACAAGCAGTAGGAATTCTAATGTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030039.13 |
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