RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FMC1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000019689

Ensembl transcript IDs: ENSMUST00000019833.5

Found 23 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR TCA 90 bp ATATTGTTAGAAATGGTTAAACTCTTGAATGAAGGAACATCTGAGGACTCTCTGCCCTTCCCTCCAGGCTaGCGGGGCAACTGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: ILLEMVKLLNEGTSEDSLPFPPG*RGNWRP
Trigger: GGGCCTCCAGTTGCCCCGTCAGCCTGGAGGGAAGGG...CAGAGAGTCCTCAGATGTTCCTTCATTCAAGAGTTTAACCATTTCTAACAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019833.5
CDS-3UTR CCA 90 bp ATATTGTTAGAAATGGTTAAACTCTTGAATGAAGGAACATCTGAGGACTCTCTGCGCTGTGTCGCGATATaGCCGCCCGGTGGCCGCGTT +
Preference number: 4 (lower is better)
Translates to: ILLEMVKLLNEGTSEDSLRCVAI*PPGGRV
Trigger: AACGCGGCCACCGGGCGGCCATATCGCGACACAGCG...CAGAGAGTCCTCAGATGTTCCTTCATTCAAGAGTTTAACCATTTCTAACAATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019833.5
CDS-3UTR CCA 90 bp ATATTGTTAGAAATGGTTAAACTCTTGAATGAAGGAACATCTGAGGACTCTCTGGATATGGCCGCCCGGTaGCCGCGTTCAGGTAGCGCA +
Preference number: 4 (lower is better)
Translates to: ILLEMVKLLNEGTSEDSLDMAAR*PRSGSA
Trigger: TGCGCTACCTGAACGCGGCCACCGGGCGGCCATATC...CAGAGAGTCCTCAGATGTTCCTTCATTCAAGAGTTTAACCATTTCTAACAATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019833.5
CDS-3UTR TCA 90 bp ATATTGTTAGAAATGGTTAAACTCTTGAATGAAGGAACATCTGAGGACTCTCTGAGCAGACTCCTCCACTaGACGCTCACCCTTGCCATG +
Preference number: 4 (lower is better)
Translates to: ILLEMVKLLNEGTSEDSLSRLLH*TLTLAM
Trigger: CATGGCAAGGGTGAGCGTTCAGTGGAGGAGTCTGCT...CAGAGAGTCCTCAGATGTTCCTTCATTCAAGAGTTTAACCATTTCTAACAATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019833.5
CDS-3UTR TCA 90 bp ATATTGTTAGAAATGGTTAAACTCTTGAATGAAGGAACATCTGAGGACTCTCTGGTGGCAGCTTGGAAGTaGAGTTCGTGTTGGGCTCTA +
Preference number: 4 (lower is better)
Translates to: ILLEMVKLLNEGTSEDSLVAAWK*SSCWAL
Trigger: TAGAGCCCAACACGAACTTCACTTCCAAGCTGCCAC...CAGAGAGTCCTCAGATGTTCCTTCATTCAAGAGTTTAACCATTTCTAACAATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019833.5
CDS-3UTR GCA 90 bp ATATTGTTAGAAATGGTTAAACTCTTGAATGAAGGAACATCTGAGGACTCTCTGCTACATGTTGCCGGATaGTACTCAAAAGGCAGAGAT +
Preference number: 4 (lower is better)
Translates to: ILLEMVKLLNEGTSEDSLLHVAG*YSKGRD
Trigger: ATCTCTGCCTTTTGAGTAGCATCCGGCAACATGTAG...CAGAGAGTCCTCAGATGTTCCTTCATTCAAGAGTTTAACCATTTCTAACAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019833.5
CDS-3UTR GCA 90 bp ATATTGTTAGAAATGGTTAAACTCTTGAATGAAGGAACATCTGAGGACTCTCTGCTGAACGCTCACCCTTaGCATGAAATTCCTGATGAA +
Preference number: 4 (lower is better)
Translates to: ILLEMVKLLNEGTSEDSLLNAHP*HEIPDE
Trigger: TTCATCAGGAATTTCATGGCAAGGGTGAGCGTTCAG...CAGAGAGTCCTCAGATGTTCCTTCATTCAAGAGTTTAACCATTTCTAACAATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019833.5
CDS-3UTR CCA 90 bp ATATTGTTAGAAATGGTTAAACTCTTGAATGAAGGAACATCTGAGGACTCTCTGAAAGGCAGAGATAGGTaGCAGCTTGGAAGTGAAGTT +
Preference number: 4 (lower is better)
Translates to: ILLEMVKLLNEGTSEDSLKGRDR*QLGSEV
Trigger: AACTTCACTTCCAAGCTGCCACCTATCTCTGCCTTT...CAGAGAGTCCTCAGATGTTCCTTCATTCAAGAGTTTAACCATTTCTAACAATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019833.5
CDS CCA 90 bp TCGGAAAGCCTTAACGAGGTACCGGTAGGCCGCTGTGTCGCGATATaGCCGCCCGGTGGCCGCGTTCAGGTAGCGCAGCTCCCTCAGAAG +
Preference number: 5 (lower is better)
Translates to: SESLNEVPVGRCVAI*PPGGRVQVAQLPQK
Trigger: CTTCTGAGGGAGCTGCGCTACCTGAACGCGGCCACCGGGCGGCCATATCGCGACACAGCGGCCTACCGGTACCTCGTTAAGGCTTTCCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019833.5
CDS GCA 90 bp GGAGGCCCACTAAACCAGCAGACTCCTCCACTGAACGCTCACCCTTaGCATGAAATTCCTGATGAAGGGCTACATGTTGCCGGATGCTAC +
Preference number: 5 (lower is better)
Translates to: GGPLNQQTPPLNAHP*HEIPDEGLHVAGCY
Trigger: GTAGCATCCGGCAACATGTAGCCCTTCATCAGGAATTTCATGGCAAGGGTGAGCGTTCAGTGGAGGAGTCTGCTGGTTTAGTGGGCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019833.5
CDS CCA 90 bp GAAGGGCTACATGTTGCCGGATGCTACTCAAAAGGCAGAGATAGGTaGCAGCTTGGAAGTGAAGTTCGTGTTGGGCTCTACACAACTTCT +
Preference number: 5 (lower is better)
Translates to: EGLHVAGCYSKGRDR*QLGSEVRVGLYTTS
Trigger: AGAAGTTGTGTAGAGCCCAACACGAACTTCACTTCCAAGCTGCCACCTATCTCTGCCTTTTGAGTAGCATCCGGCAACATGTAGCCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019833.5
CDS GCA 90 bp CACCCTTGCCATGAAATTCCTGATGAAGGGCTACATGTTGCCGGATaGTACTCAAAAGGCAGAGATAGGTGGCAGCTTGGAAGTGAAGTT +
Preference number: 5 (lower is better)
Translates to: HPCHEIPDEGLHVAG*YSKGRDRWQLGSEV
Trigger: AACTTCACTTCCAAGCTGCCACCTATCTCTGCCTTTTGAGTAGCATCCGGCAACATGTAGCCCTTCATCAGGAATTTCATGGCAAGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019833.5
CDS-3UTR CAA 90 bp ATATTGTTAGAAATGGTTAAACTCTTGAATGAAGGAACATCTGAGGACTCTCTGGAGATAGGTGGCAGCTaGGAAGTGAAGTTCGTGTTG +
Preference number: 5 (lower is better)
Translates to: ILLEMVKLLNEGTSEDSLEIGGS*EVKFVL
Trigger: CAACACGAACTTCACTTCCAAGCTGCCACCTATCTC...CAGAGAGTCCTCAGATGTTCCTTCATTCAAGAGTTTAACCATTTCTAACAATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019833.5
CDS-3UTR CAA 90 bp ATATTGTTAGAAATGGTTAAACTCTTGAATGAAGGAACATCTGAGGACTCTCTGATGAAGGGCTACATGTaGCCGGATGCTACTCAAAAG +
Preference number: 5 (lower is better)
Translates to: ILLEMVKLLNEGTSEDSLMKGYM*PDATQK
Trigger: CTTTTGAGTAGCATCCGGCAACATGTAGCCCTTCAT...CAGAGAGTCCTCAGATGTTCCTTCATTCAAGAGTTTAACCATTTCTAACAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019833.5
CDS CCA 72 bp ACCGGTAGGCCGCTGTGTCGCGATATGGCCGCCCGGTaGCCGCGTTCAGGTAGCGCAGCTCCCTCAGAAGGC +
Preference number: 6 (lower is better)
Translates to: TGRPLCRDMAAR*PRSGSAAPSEG
Trigger: GCCTTCTGAGGGAGCTGCGCTACCTGAACGCGGCCACCGGGCGGCCATATCGCGACACAGCGGCCTACCGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019833.5
CDS CCA 72 bp CTTAACGAGGTACCGGTAGGCCGCTGTGTCGCGATATaGCCGCCCGGTGGCCGCGTTCAGGTAGCGCAGCTC +
Preference number: 6 (lower is better)
Translates to: LNEVPVGRCVAI*PPGGRVQVAQL
Trigger: GAGCTGCGCTACCTGAACGCGGCCACCGGGCGGCCATATCGCGACACAGCGGCCTACCGGTACCTCGTTAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019833.5
CDS GCA 72 bp TTGGGCTCTACACAACTTCTCACTGGTAACCCGATGTaGTCGGAAAGCCTTAACGAGGTACCGGTAGGCCGC +
Preference number: 6 (lower is better)
Translates to: LGSTQLLTGNPM*SESLNEVPVGR
Trigger: GCGGCCTACCGGTACCTCGTTAAGGCTTTCCGAGCACATCGGGTTACCAGTGAGAAGTTGTGTAGAGCCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019833.5
CDS CCA 72 bp CATGTTGCCGGATGCTACTCAAAAGGCAGAGATAGGTaGCAGCTTGGAAGTGAAGTTCGTGTTGGGCTCTAC +
Preference number: 6 (lower is better)
Translates to: HVAGCYSKGRDR*QLGSEVRVGLY
Trigger: GTAGAGCCCAACACGAACTTCACTTCCAAGCTGCCACCTATCTCTGCCTTTTGAGTAGCATCCGGCAACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019833.5
CDS CAA 72 bp GCAGAGATAGGTGGCAGCTTGGAAGTGAAGTTCGTGTaGGGCTCTACACAACTTCTCACTGGTAACCCGATG +
Preference number: 6 (lower is better)
Translates to: AEIGGSLEVKFV*GSTQLLTGNPM
Trigger: CATCGGGTTACCAGTGAGAAGTTGTGTAGAGCCCAACACGAACTTCACTTCCAAGCTGCCACCTATCTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019833.5
CDS CAA 90 bp ACTCAAAAGGCAGAGATAGGTGGCAGCTTGGAAGTGAAGTTCGTGTaGGGCTCTACACAACTTCTCACTGGTAACCCGATGTGCTCGGAA +
Preference number: 6 (lower is better)
Translates to: TQKAEIGGSLEVKFV*GSTQLLTGNPMCSE
Trigger: TTCCGAGCACATCGGGTTACCAGTGAGAAGTTGTGTAGAGCCCAACACGAACTTCACTTCCAAGCTGCCACCTATCTCTGCCTTTTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019833.5
CDS CAA 72 bp ACCCTTGCCATGAAATTCCTGATGAAGGGCTACATGTaGCCGGATGCTACTCAAAAGGCAGAGATAGGTGGC +
Preference number: 6 (lower is better)
Translates to: TLAMKFLMKGYM*PDATQKAEIGG
Trigger: GCCACCTATCTCTGCCTTTTGAGTAGCATCCGGCAACATGTAGCCCTTCATCAGGAATTTCATGGCAAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019833.5
CDS CAA 90 bp TACATGTTGCCGGATGCTACTCAAAAGGCAGAGATAGGTGGCAGCTaGGAAGTGAAGTTCGTGTTGGGCTCTACACAACTTCTCACTGGT +
Preference number: 6 (lower is better)
Translates to: YMLPDATQKAEIGGS*EVKFVLGSTQLLTG
Trigger: ACCAGTGAGAAGTTGTGTAGAGCCCAACACGAACTTCACTTCCAAGCTGCCACCTATCTCTGCCTTTTGAGTAGCATCCGGCAACATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019833.5
CDS GCA 72 bp CATGAAATTCCTGATGAAGGGCTACATGTTGCCGGATaGTACTCAAAAGGCAGAGATAGGTGGCAGCTTGGA +
Preference number: 6 (lower is better)
Translates to: HEIPDEGLHVAG*YSKGRDRWQLG
Trigger: TCCAAGCTGCCACCTATCTCTGCCTTTTGAGTAGCATCCGGCAACATGTAGCCCTTCATCAGGAATTTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019833.5