Pregenerated sensors for FLYWCH2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023911Ensembl transcript IDs: ENSMUST00000024704.10, ENSMUST00000122991.2, ENSMUST00000127144.2
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAAGTAGCTTATGCAACAGCAGTTGCCAAGGTTATGGGGAAGTGCTaGGGGCCTCAGGGAGCACAGTGGTCTCCTCTGAACTTGAAGAAG | + |
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Preference number: 1 (lower is better) Translates to: KVAYATAVAKVMGKC*GPQGAQWSPLNLKK Trigger: CTTCTTCAAGTTCAGAGGAGACCACTGTGCTCCCTGAGGCCCCCAGCACTTCCCCATAACCTTGGCAACTGCTGTTGCATAAGCTACTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122991.2 |
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| 3UTR CAA 90 bp | GGGAAGTGCTGGGGGCCTCAGGGAGCACAGTGGTCTCCTCTGAACTaGAAGAAGACACCCCTGACCCTCCATTGTCTTCTGGACCATCTG | + |
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Preference number: 2 (lower is better) Translates to: GKCWGPQGAQWSPLN*KKTPLTLHCLLDHL Trigger: CAGATGGTCCAGAAGACAATGGAGGGTCAGGGGTGTCTTCTTCAAGTTCAGAGGAGACCACTGTGCTCCCTGAGGCCCCCAGCACTTCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000122991.2 ENSMUST00000127144.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGGGGCCTCAGGGAGCACAGTGGTCTCCTCTGAACTTGAAGAAGACACCCCTGTCTTCTGGACCATCTaGATCAAGGTCTTTCTGGAC | + |
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Preference number: 2 (lower is better) Translates to: LGASGSTVVSSELEEDTPVFWTI*IKVFLD Trigger: GTCCAGAAAGACCTTGATTCAGATGGTCCAGAAGAC...AGGGGTGTCTTCTTCAAGTTCAGAGGAGACCACTGTGCTCCCTGAGGCCCCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000122991.2 ENSMUST00000127144.2 |
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| 3UTR-3UTR CCA 90 bp | TGCCAAGGTTATGGGGAAGTGCTGGGGGCCTCAGGGAGCACAGTGGTCTCCTCTGAATCAAGGTCTTTCTaGACTCCTCCATACTGCTTA | + |
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Preference number: 2 (lower is better) Translates to: CQGYGEVLGASGSTVVSSESRSF*TPPYCL Trigger: TAAGCAGTATGGAGGAGTCCAGAAAGACCTTGATTC...AGAGGAGACCACTGTGCTCCCTGAGGCCCCCAGCACTTCCCCATAACCTTGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000122991.2 ENSMUST00000127144.2 |
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| 3UTR-3UTR TCA 90 bp | AGCACAGTGGTCTCCTCTGAACTTGAAGAAGACACCCCTGACCCTCCATTGTCTTGGGGATGGGCAGTGTaGCCATGTAACTCTATGACC | + |
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Preference number: 2 (lower is better) Translates to: STVVSSELEEDTPDPPLSWGWAV*PCNSMT Trigger: GGTCATAGAGTTACATGGTCACACTGCCCATCCCCA...AGACAATGGAGGGTCAGGGGTGTCTTCTTCAAGTTCAGAGGAGACCACTGTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127144.2 |
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| 3UTR-3UTR CCA 90 bp | GGTTATGGGGAAGTGCTGGGGGCCTCAGGGAGCACAGTGGTCTCCTCTGAACTTGAATCAAGGTCTTTCTaGACTCCTCCATACTGCTTA | + |
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Preference number: 2 (lower is better) Translates to: GYGEVLGASGSTVVSSELESRSF*TPPYCL Trigger: TAAGCAGTATGGAGGAGTCCAGAAAGACCTTGATTC...AAGTTCAGAGGAGACCACTGTGCTCCCTGAGGCCCCCAGCACTTCCCCATAACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000122991.2 ENSMUST00000127144.2 |
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| 3UTR-3UTR CAA 90 bp | CAAGGTTATGGGGAAGTGCTGGGGGCCTCAGGGAGCACAGTGGTCTCCTCTGAAGCACTCCATCTTGGCTaGCCTGAGAGTTTAGCCCCT | + |
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Preference number: 3 (lower is better) Translates to: QGYGEVLGASGSTVVSSEALHLG*PESLAP Trigger: AGGGGCTAAACTCTCAGGCAAGCCAAGATGGAGTGC...TTCAGAGGAGACCACTGTGCTCCCTGAGGCCCCCAGCACTTCCCCATAACCTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000127144.2 |
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| 3UTR CCA 72 bp | TATGCAACAGCAGTTGCCAAGGTTATGGGGAAGTGCTaGGGGCCTCAGGGAGCACAGTGGTCTCCTCTGAAC | + |
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Preference number: 3 (lower is better) Translates to: YATAVAKVMGKC*GPQGAQWSPLN Trigger: GTTCAGAGGAGACCACTGTGCTCCCTGAGGCCCCCAGCACTTCCCCATAACCTTGGCAACTGCTGTTGCATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122991.2 |
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| CDS-3UTR GCA 90 bp | GCAACAGCAGTTGCCAAGGTTATGGGGAAGTGCTGGGGGCCTCAGGGAGCACAGCCCCCAGGTTCTGCTTaGTGCGCTTCTGCTCGGGCT | + |
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Preference number: 4 (lower is better) Translates to: ATAVAKVMGKCWGPQGAQPPGSA*CASARA Trigger: AGCCCGAGCAGAAGCGCAGCAAGCAGAACCTGGGGG...CTGTGCTCCCTGAGGCCCCCAGCACTTCCCCATAACCTTGGCAACTGCTGTTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000122991.2 |
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| CDS-3UTR GCA 90 bp | GCAACAGCAGTTGCCAAGGTTATGGGGAAGTGCTGGGGGCCTCAGGGAGCACAGCCAGGTTCTGCTTGCTaGGCTTCTGCTCGGGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: ATAVAKVMGKCWGPQGAQPGSAC*ASARAP Trigger: TGGAGCCCGAGCAGAAGCGCAGCAAGCAGAACCTGG...CTGTGCTCCCTGAGGCCCCCAGCACTTCCCCATAACCTTGGCAACTGCTGTTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122991.2 |
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| CDS-3UTR GCA 90 bp | CAAGGTTATGGGGAAGTGCTGGGGGCCTCAGGGAGCACAGTGGTCTCCTCTGAATCCCCTCCTTCCCCGTaGTGGTTGGGTGCATGGCTG | + |
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Preference number: 4 (lower is better) Translates to: QGYGEVLGASGSTVVSSESPPSP*WLGAWL Trigger: CAGCCATGCACCCAACCAGCACGGGGAAGGAGGGGA...TTCAGAGGAGACCACTGTGCTCCCTGAGGCCCCCAGCACTTCCCCATAACCTTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000127144.2 |
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| CDS-3UTR GCA 90 bp | GTGCTGGGGGCCTCAGGGAGCACAGTGGTCTCCTCTGAACTTGAAGAAGACACCCTGGGACCACATCTGTaGCAGGCTGGGGAGCTGGTT | + |
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Preference number: 4 (lower is better) Translates to: VLGASGSTVVSSELEEDTLGPHL*QAGELV Trigger: AACCAGCTCCCCAGCCTGGCACAGATGTGGTCCCAG...GGTGTCTTCTTCAAGTTCAGAGGAGACCACTGTGCTCCCTGAGGCCCCCAGCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127144.2 |
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| CDS-3UTR TCA 90 bp | CTGGGGGCCTCAGGGAGCACAGTGGTCTCCTCTGAACTTGAAGAAGACACCCCTCCATCTTGGCTTGCCTaGGAGTTTAGCCCCCAGGTT | + |
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Preference number: 4 (lower is better) Translates to: LGASGSTVVSSELEEDTPPSWLA*EFSPQV Trigger: AACCTGGGGGCTAAACTCTCAGGCAAGCCAAGATGG...AGGGGTGTCTTCTTCAAGTTCAGAGGAGACCACTGTGCTCCCTGAGGCCCCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000122991.2 |
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| CDS-3UTR GCA 90 bp | GTTATGGGGAAGTGCTGGGGGCCTCAGGGAGCACAGTGGTCTCCTCTGAACTTGAGGGACATGATGCAGTaGACTCCTTTGCGCTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: VMGKCWGPQGAQWSPLNLRDMMQ*TPLRLA Trigger: GGCCAAGCGCAAAGGAGTGCACTGCATCATGTCCCT...CAAGTTCAGAGGAGACCACTGTGCTCCCTGAGGCCCCCAGCACTTCCCCATAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000122991.2 ENSMUST00000127144.2 |
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| CDS-3UTR GCA 90 bp | ATGGGGAAGTGCTGGGGGCCTCAGGGAGCACAGTGGTCTCCTCTGAACTTGAAGAGGGACATGATGCAGTaGACTCCTTTGCGCTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: MGKCWGPQGAQWSPLNLKRDMMQ*TPLRLA Trigger: GGCCAAGCGCAAAGGAGTGCACTGCATCATGTCCCT...CTTCAAGTTCAGAGGAGACCACTGTGCTCCCTGAGGCCCCCAGCACTTCCCCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000122991.2 ENSMUST00000127144.2 |
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| CDS-3UTR CCA 90 bp | GTCCCCAAAGAACTCCAGGCTTGTAGCAATGGGCACTCCATCTTGGCTTGCCTGTGGGGAGCTGGTTCCTaGCTGGCCTTCATGCTCTCA | + |
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Preference number: 4 (lower is better) Translates to: VPKELQACSNGHSILACLWGAGS*LAFMLS Trigger: TGAGAGCATGAAGGCCAGCCAGGAACCAGCTCCCCA...CAGGCAAGCCAAGATGGAGTGCCCATTGCTACAAGCCTGGAGTTCTTTGGGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127144.2 |
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| CDS-3UTR CCA 90 bp | CCTCTGAACTTGAAGAAGACACCCCTGACCCTCCATTGTCTTCTGGACCATCTGCAAGGTGGCTGGGCCTaGCACCCCCAGGGACATGAT | + |
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Preference number: 4 (lower is better) Translates to: PLNLKKTPLTLHCLLDHLQGGWA*HPQGHD Trigger: ATCATGTCCCTGGGGGTGCCAGGCCCAGCCACCTTG...CAGATGGTCCAGAAGACAATGGAGGGTCAGGGGTGTCTTCTTCAAGTTCAGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000122991.2 ENSMUST00000127144.2 |
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| CDS-3UTR CCA 90 bp | TGCCAAGGTTATGGGGAAGTGCTGGGGGCCTCAGGGAGCACAGTGGTCTCCTCTTCAGCAGAACCAGTTTaGAGAACTTTCTGGGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: CQGYGEVLGASGSTVVSSSAEPV*RTFWAS Trigger: GGAAGCCCAGAAAGTTCTCCAAACTGGTTCTGCTGA...AGAGGAGACCACTGTGCTCCCTGAGGCCCCCAGCACTTCCCCATAACCTTGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127144.2 |
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| CDS-3UTR CCA 90 bp | TCTGAACTTGAAGAAGACACCCCTGACCCTCCATTGTCTTCTGGACCATCTGAACAAGGTGGCTGGGCCTaGCACCCCCAGGGACATGAT | + |
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Preference number: 4 (lower is better) Translates to: SELEEDTPDPPLSSGPSEQGGWA*HPQGHD Trigger: ATCATGTCCCTGGGGGTGCCAGGCCCAGCCACCTTG...TTCAGATGGTCCAGAAGACAATGGAGGGTCAGGGGTGTCTTCTTCAAGTTCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000122991.2 ENSMUST00000127144.2 |
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| CDS-3UTR GCA 90 bp | AATCAAGGTCTTTCTGGACTCCTCCATACTGCTTATGTTGTGGGTAGGAGGCTGCCAGGTTCTGCTTGCTaGGCTTCTGCTCGGGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: NQGLSGLLHTAYVVGRRLPGSAC*ASARAP Trigger: TGGAGCCCGAGCAGAAGCGCAGCAAGCAGAACCTGG...CAGCCTCCTACCCACAACATAAGCAGTATGGAGGAGTCCAGAAAGACCTTGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122991.2 ENSMUST00000127144.2 |
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| CDS-3UTR CCA 90 bp | ACCCTCCATTGTCTTCTGGACCATCTGAATCAAGGTCTTTCTGGACTCCTCCATACATCTGTGCCAGGCTaGGGAGCTGGTTCCTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: TLHCLLDHLNQGLSGLLHTSVPG*GAGSWL Trigger: CAGCCAGGAACCAGCTCCCCAGCCTGGCACAGATGT...ATGGAGGAGTCCAGAAAGACCTTGATTCAGATGGTCCAGAAGACAATGGAGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127144.2 |
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| CDS-3UTR CCA 90 bp | CATCTGAATCAAGGTCTTTCTGGACTCCTCCATACTGCTTATGTTGTGGGTAGGTGGCCCCAGCCACTTTaGCGCTGTCTTTGGAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: HLNQGLSGLLHTAYVVGRWPQPL*RCLWRL Trigger: CAGCCTCCAAAGACAGCGCCAAAGTGGCTGGGGCCA...CCTACCCACAACATAAGCAGTATGGAGGAGTCCAGAAAGACCTTGATTCAGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127144.2 |
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| 3UTR CAA 72 bp | TCCTCTGAACTTGAAGAAGACACCCCTGACCCTCCATaGTCTTCTGGACCATCTGAATCAAGGTCTTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: SSELEEDTPDPP*SSGPSESRSFW Trigger: CCAGAAAGACCTTGATTCAGATGGTCCAGAAGACAATGGAGGGTCAGGGGTGTCTTCTTCAAGTTCAGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122991.2 ENSMUST00000127144.2 |
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| CDS-3UTR CCA 90 bp | TTCTCTCTTTGTTTCTTACTTATAAAAGTAGCTTATGCAACAGCAGTTGCCAAGCTTCCTGGGGGCTGCTaGGACCACATCTGTGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: FSLCFLLIKVAYATAVAKLPGGC*DHICAR Trigger: CCTGGCACAGATGTGGTCCCAGCAGCCCCCAGGAAG...CTTGGCAACTGCTGTTGCATAAGCTACTTTTATAAGTAAGAAACAAAGAGAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024704.10 |
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| CDS-3UTR CCA 90 bp | TTCTCTCTTTGTTTCTTACTTATAAAAGTAGCTTATGCAACAGCAGTTGCCAAGCAAGGTGGCTGGGCCTaGCACCCCCAGGGACATGAT | + |
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Preference number: 4 (lower is better) Translates to: FSLCFLLIKVAYATAVAKQGGWA*HPQGHD Trigger: ATCATGTCCCTGGGGGTGCCAGGCCCAGCCACCTTG...CTTGGCAACTGCTGTTGCATAAGCTACTTTTATAAGTAAGAAACAAAGAGAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024704.10 |
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| CDS-3UTR GCA 90 bp | TTCTCTCTTTGTTTCTTACTTATAAAAGTAGCTTATGCAACAGCAGTTGCCAAGCTGGGACCACATCTGTaGCAGGCTGGGGAGCTGGTT | + |
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Preference number: 4 (lower is better) Translates to: FSLCFLLIKVAYATAVAKLGPHL*QAGELV Trigger: AACCAGCTCCCCAGCCTGGCACAGATGTGGTCCCAG...CTTGGCAACTGCTGTTGCATAAGCTACTTTTATAAGTAAGAAACAAAGAGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024704.10 |
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| CDS-3UTR GCA 90 bp | TTCTCTCTTTGTTTCTTACTTATAAAAGTAGCTTATGCAACAGCAGTTGCCAAGCCAGGTTCTGCTTGCTaGGCTTCTGCTCGGGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: FSLCFLLIKVAYATAVAKPGSAC*ASARAP Trigger: TGGAGCCCGAGCAGAAGCGCAGCAAGCAGAACCTGG...CTTGGCAACTGCTGTTGCATAAGCTACTTTTATAAGTAAGAAACAAAGAGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024704.10 |
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| CDS-3UTR CCA 90 bp | TTCTCTCTTTGTTTCTTACTTATAAAAGTAGCTTATGCAACAGCAGTTGCCAAGACATCTGTGCCAGGCTaGGGAGCTGGTTCCTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: FSLCFLLIKVAYATAVAKTSVPG*GAGSWL Trigger: CAGCCAGGAACCAGCTCCCCAGCCTGGCACAGATGT...CTTGGCAACTGCTGTTGCATAAGCTACTTTTATAAGTAAGAAACAAAGAGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024704.10 |
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| CDS-3UTR CCA 90 bp | TTCTCTCTTTGTTTCTTACTTATAAAAGTAGCTTATGCAACAGCAGTTGCCAAGTGGCCCCAGCCACTTTaGCGCTGTCTTTGGAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: FSLCFLLIKVAYATAVAKWPQPL*RCLWRL Trigger: CAGCCTCCAAAGACAGCGCCAAAGTGGCTGGGGCCA...CTTGGCAACTGCTGTTGCATAAGCTACTTTTATAAGTAAGAAACAAAGAGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024704.10 |
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| CDS-3UTR CCA 90 bp | TTCTCTCTTTGTTTCTTACTTATAAAAGTAGCTTATGCAACAGCAGTTGCCAAGTGGGGAGCTGGTTCCTaGCTGGCCTTCATGCTCTCA | + |
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Preference number: 4 (lower is better) Translates to: FSLCFLLIKVAYATAVAKWGAGS*LAFMLS Trigger: TGAGAGCATGAAGGCCAGCCAGGAACCAGCTCCCCA...CTTGGCAACTGCTGTTGCATAAGCTACTTTTATAAGTAAGAAACAAAGAGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024704.10 |
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| CDS-3UTR GCA 90 bp | TTCTCTCTTTGTTTCTTACTTATAAAAGTAGCTTATGCAACAGCAGTTGCCAAGAGGGACATGATGCAGTaGACTCCTTTGCGCTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: FSLCFLLIKVAYATAVAKRDMMQ*TPLRLA Trigger: GGCCAAGCGCAAAGGAGTGCACTGCATCATGTCCCT...CTTGGCAACTGCTGTTGCATAAGCTACTTTTATAAGTAAGAAACAAAGAGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024704.10 |
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| CDS-3UTR GCA 90 bp | TTCTCTCTTTGTTTCTTACTTATAAAAGTAGCTTATGCAACAGCAGTTGCCAAGAATCCAGGTTCTGCTTaGTGCGCTTCTGCTCGGGCT | + |
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Preference number: 4 (lower is better) Translates to: FSLCFLLIKVAYATAVAKNPGSA*CASARA Trigger: AGCCCGAGCAGAAGCGCAGCAAGCAGAACCTGGATT...CTTGGCAACTGCTGTTGCATAAGCTACTTTTATAAGTAAGAAACAAAGAGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024704.10 |
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| CDS-3UTR CCA 90 bp | TTCTCTCTTTGTTTCTTACTTATAAAAGTAGCTTATGCAACAGCAGTTGCCAAGCCTCAGGGAGCACAGTaGTCTCCTCTGAACTTGAAG | + |
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Preference number: 4 (lower is better) Translates to: FSLCFLLIKVAYATAVAKPQGAQ*SPLNLK Trigger: CTTCAAGTTCAGAGGAGACCACTGTGCTCCCTGAGG...CTTGGCAACTGCTGTTGCATAAGCTACTTTTATAAGTAAGAAACAAAGAGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024704.10 |
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| CDS-3UTR CCA 90 bp | TTCTCTCTTTGTTTCTTACTTATAAAAGTAGCTTATGCAACAGCAGTTGCCAAGTCAGCAGAACCAGTTTaGAGAACTTTCTGGGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: FSLCFLLIKVAYATAVAKSAEPV*RTFWAS Trigger: GGAAGCCCAGAAAGTTCTCCAAACTGGTTCTGCTGA...CTTGGCAACTGCTGTTGCATAAGCTACTTTTATAAGTAAGAAACAAAGAGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024704.10 |
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| CDS CCA 90 bp | CTCAGGATGAGTCTTGAGGAGGGCCTTAGCCAAGGTGGCTGGGCCTaGCACCCCCAGGGACATGATGCAGTGCACTCCTTTGCGCTTGGC | + |
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Preference number: 5 (lower is better) Translates to: LRMSLEEGLSQGGWA*HPQGHDAVHSFALG Trigger: GCCAAGCGCAAAGGAGTGCACTGCATCATGTCCCTGGGGGTGCCAGGCCCAGCCACCTTGGCTAAGGCCCTCCTCAAGACTCATCCTGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000024704.10 ENSMUST00000122991.2 ENSMUST00000127144.2 |
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| CDS CCA 90 bp | CTGAGCCTCAGGATGAGTCTTGAGGAGGGCCTTAGCCAAGGTGGCTaGGCCTGGCACCCCCAGGGACATGATGCAGTGCACTCCTTTGCG | + |
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Preference number: 5 (lower is better) Translates to: LSLRMSLEEGLSQGG*AWHPQGHDAVHSFA Trigger: CGCAAAGGAGTGCACTGCATCATGTCCCTGGGGGTGCCAGGCCCAGCCACCTTGGCTAAGGCCCTCCTCAAGACTCATCCTGAGGCTCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000024704.10 ENSMUST00000122991.2 ENSMUST00000127144.2 |
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| CDS GCA 90 bp | ACCCTCCATTGTCTTCTGGACCATCTGAATCCAGGTTCTGCTTGCTaGGCTTCTGCTCGGGCTCCAGGGGAGTCGCTTCAATGGCCCGCT | + |
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Preference number: 5 (lower is better) Translates to: TLHCLLDHLNPGSAC*ASARAPGESLQWPA Trigger: AGCGGGCCATTGAAGCGACTCCCCTGGAGCCCGAGCAGAAGCGCAGCAAGCAGAACCTGGATTCAGATGGTCCAGAAGACAATGGAGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024704.10 |
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| CDS-3UTR CAA 90 bp | CTTGGCTTGCCTGAGAGTTTAGCCCCTAATGTGGGGATGGGCAGTGTGACCATGATGCAGTGCACTCCTTaGCGCTTGGCCCCAGCCACT | + |
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Preference number: 5 (lower is better) Translates to: LGLPESLAPNVGMGSVTMMQCTP*RLAPAT Trigger: AGTGGCTGGGGCCAAGCGCAAAGGAGTGCACTGCAT...CATGGTCACACTGCCCATCCCCACATTAGGGGCTAAACTCTCAGGCAAGCCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000127144.2 |
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| CDS-3UTR CAA 90 bp | ACAGTGGTCTCCTCTGAACTTGAAGAAGACACCCCTGACCCTCCATTGTCTTCTATGCAGTGCACTCCTTaGCGCTTGGCCCCAGCCACT | + |
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Preference number: 5 (lower is better) Translates to: TVVSSELEEDTPDPPLSSMQCTP*RLAPAT Trigger: AGTGGCTGGGGCCAAGCGCAAAGGAGTGCACTGCAT...AGAAGACAATGGAGGGTCAGGGGTGTCTTCTTCAAGTTCAGAGGAGACCACTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000122991.2 ENSMUST00000127144.2 |
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| CDS-3UTR CAA 90 bp | TCCTTATGGTCCCCAAAGAACTCCAGGCTTGTAGCAATGGGCACTCCATCTTGGACTTTGGCGCTGTCTTaGGAGGCTGTCAGCAGAACC | + |
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Preference number: 5 (lower is better) Translates to: SLWSPKNSRLVAMGTPSWTLALS*EAVSRT Trigger: GGTTCTGCTGACAGCCTCCAAAGACAGCGCCAAAGT...CCAAGATGGAGTGCCCATTGCTACAAGCCTGGAGTTCTTTGGGGACCATAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127144.2 |
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| CDS-3UTR CAA 90 bp | TTCTCTCTTTGTTTCTTACTTATAAAAGTAGCTTATGCAACAGCAGTTGCCAAGATGCAGTGCACTCCTTaGCGCTTGGCCCCAGCCACT | + |
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Preference number: 5 (lower is better) Translates to: FSLCFLLIKVAYATAVAKMQCTP*RLAPAT Trigger: AGTGGCTGGGGCCAAGCGCAAAGGAGTGCACTGCAT...CTTGGCAACTGCTGTTGCATAAGCTACTTTTATAAGTAAGAAACAAAGAGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024704.10 |
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| CDS-3UTR CAA 90 bp | TTCTCTCTTTGTTTCTTACTTATAAAAGTAGCTTATGCAACAGCAGTTGCCAAGACTTTGGCGCTGTCTTaGGAGGCTGTCAGCAGAACC | + |
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Preference number: 5 (lower is better) Translates to: FSLCFLLIKVAYATAVAKTLALS*EAVSRT Trigger: GGTTCTGCTGACAGCCTCCAAAGACAGCGCCAAAGT...CTTGGCAACTGCTGTTGCATAAGCTACTTTTATAAGTAAGAAACAAAGAGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024704.10 |
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| CDS GCA 72 bp | GTGGCTGGGCCTGGCACCCCCAGGGACATGATGCAGTaGACTCCTTTGCGCTTGGCCCCAGCCACTTTGGCG | + |
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Preference number: 6 (lower is better) Translates to: VAGPGTPRDMMQ*TPLRLAPATLA Trigger: CGCCAAAGTGGCTGGGGCCAAGCGCAAAGGAGTGCACTGCATCATGTCCCTGGGGGTGCCAGGCCCAGCCAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024704.10 ENSMUST00000127144.2 |
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| CDS GCA 72 bp | GAGAGTTTAGCCCCCAGGTTCTGCTTGCTGCGCTTCTaGTCGGGCTCCAGGGGAGTCGCTTCAATGGCCCGC | + |
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Preference number: 6 (lower is better) Translates to: ESLAPRFCLLRF*SGSRGVASMAR Trigger: GCGGGCCATTGAAGCGACTCCCCTGGAGCCCGAGCAGAAGCGCAGCAAGCAGAACCTGGGGGCTAAACTCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122991.2 |
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| CDS CAA 90 bp | GGGCCTGGCACCCCCAGGGACATGATGCAGTGCACTCCTTTGCGCTaGGCCCCAGCCACTTTGGCGCTGTCTTTGGAGGCTGTCAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: GPGTPRDMMQCTPLR*APATLALSLEAVSR Trigger: TCTGCTGACAGCCTCCAAAGACAGCGCCAAAGTGGCTGGGGCCAAGCGCAAAGGAGTGCACTGCATCATGTCCCTGGGGGTGCCAGGCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024704.10 ENSMUST00000127144.2 |
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| CDS GCA 72 bp | GGACCATCTGAATCCAGGTTCTGCTTGCTGCGCTTCTaGTCGGGCTCCAGGGGAGTCGCTTCAATGGCCCGC | + |
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Preference number: 6 (lower is better) Translates to: GPSESRFCLLRF*SGSRGVASMAR Trigger: GCGGGCCATTGAAGCGACTCCCCTGGAGCCCGAGCAGAAGCGCAGCAAGCAGAACCTGGATTCAGATGGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024704.10 |
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| CDS CCA 72 bp | AGGATGAGTCTTGAGGAGGGCCTTAGCCAAGGTGGCTaGGCCTGGCACCCCCAGGGACATGATGCAGTGCAC | + |
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Preference number: 6 (lower is better) Translates to: RMSLEEGLSQGG*AWHPQGHDAVH Trigger: GTGCACTGCATCATGTCCCTGGGGGTGCCAGGCCCAGCCACCTTGGCTAAGGCCCTCCTCAAGACTCATCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000024704.10 ENSMUST00000122991.2 ENSMUST00000127144.2 |
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| CDS CAA 72 bp | ACCCCCAGGGACATGATGCAGTGCACTCCTTTGCGCTaGGCCCCAGCCACTTTGGCGCTGTCTTTGGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: TPRDMMQCTPLR*APATLALSLEA Trigger: AGCCTCCAAAGACAGCGCCAAAGTGGCTGGGGCCAAGCGCAAAGGAGTGCACTGCATCATGTCCCTGGGGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024704.10 ENSMUST00000127144.2 |
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| CDS GCA 72 bp | TGTCTTCTGGACCATCTGAATCCAGGTTCTGCTTGCTaGGCTTCTGCTCGGGCTCCAGGGGAGTCGCTTCAA | + |
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Preference number: 6 (lower is better) Translates to: CLLDHLNPGSAC*ASARAPGESLQ Trigger: TTGAAGCGACTCCCCTGGAGCCCGAGCAGAAGCGCAGCAAGCAGAACCTGGATTCAGATGGTCCAGAAGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024704.10 |
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| CDS CAA 72 bp | TCCTCTGAACTTGAAGAAGACACCCCTGACCCTCCATaGTCTTCTGGACCATCTGAATCCAGGTTCTGCTTG | + |
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Preference number: 6 (lower is better) Translates to: SSELEEDTPDPP*SSGPSESRFCL Trigger: CAAGCAGAACCTGGATTCAGATGGTCCAGAAGACAATGGAGGGTCAGGGGTGTCTTCTTCAAGTTCAGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024704.10 |
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