Pregenerated sensors for FLVCR2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034258Ensembl transcript IDs: ENSMUST00000040461.4
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCCCTAACACTCCCTCCACCAGGCGGCTGCTTCCCTCCCATCCACTaGACAAACACACACATATCTGGCCCGATACCCCAGTACTGCAGG | + |
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Preference number: 1 (lower is better) Translates to: SLTLPPPGGCFPPIH*TNTHISGPIPQYCR Trigger: CCTGCAGTACTGGGGTATCGGGCCAGATATGTGTGTGTTTGTGCAGTGGATGGGAGGGAAGCAGCCGCCTGGTGGAGGGAGTGTTAGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| 3UTR GCA 90 bp | AGTAAGGCATCTCTTCCATCCCTAACACTCCCTCCACCAGGCGGCTaGTTCCCTCCCATCCACTGCACAAACACACACATATCTGGCCCG | + |
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Preference number: 1 (lower is better) Translates to: SKASLPSLTLPPPGG*FPPIHCTNTHISGP Trigger: CGGGCCAGATATGTGTGTGTTTGTGCAGTGGATGGGAGGGAAGCAGCCGCCTGGTGGAGGGAGTGTTAGGGATGGAAGAGATGCCTTACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| 3UTR CCA 90 bp | ACCTCCACGGCCTCTCCCAGCACTAGCCCAAGACCTAAAAGGGAGTaGGGACCAGAATCCAGTCTGCATCTGAAGAGAGGTGAGGTTTTC | + |
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Preference number: 1 (lower is better) Translates to: TSTASPSTSPRPKRE*GPESSLHLKRGEVF Trigger: GAAAACCTCACCTCTCTTCAGATGCAGACTGGATTCTGGTCCCCACTCCCTTTTAGGTCTTGGGCTAGTGCTGGGAGAGGCCGTGGAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| 3UTR-3UTR TCA 90 bp | CCCCTCCCTGCACTGTCGCACCTAGGCAGAGAGCCTTCTCTAATCGCTTTCTCCGCATCTGAAGAGAGGTaGGGTTTTCCCCGAGTAAAC | + |
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Preference number: 2 (lower is better) Translates to: PLPALSHLGREPSLIAFSASEER*GFPRVN Trigger: GTTTACTCGGGGAAAACCTCACCTCTCTTCAGATGC...GGAGAAAGCGATTAGAGAAGGCTCTCTGCCTAGGTGCGACAGTGCAGGGAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| 3UTR-3UTR CCA 90 bp | CCCCTCCCTGCACTGTCGCACCTAGGCAGAGAGCCTTCTCTAATCGCTTTCTCCAGACCTAAAAGGGAGTaGGGACCAGAATCCAGTCTG | + |
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Preference number: 2 (lower is better) Translates to: PLPALSHLGREPSLIAFSRPKRE*GPESSL Trigger: CAGACTGGATTCTGGTCCCCACTCCCTTTTAGGTCT...GGAGAAAGCGATTAGAGAAGGCTCTCTGCCTAGGTGCGACAGTGCAGGGAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| 3UTR-3UTR GCA 90 bp | TTCTCTAATCGCTTTCTCCTTTGTGGCCACAAAGGTTTTATCTGGTTTATTGGTGCTCAGGCACTGCCGTaGGAGGCACACATCTTCCAG | + |
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Preference number: 2 (lower is better) Translates to: FSNRFLLCGHKGFIWFIGAQALP*EAHIFQ Trigger: CTGGAAGATGTGTGCCTCGCACGGCAGTGCCTGAGC...ACCAATAAACCAGATAAAACCTTTGTGGCCACAAAGGAGAAAGCGATTAGAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| 3UTR-3UTR TCA 90 bp | TTCTCTAATCGCTTTCTCCTTTGTGGCCACAAAGGTTTTATCTGGTTTATTGGTACTGGAACCAAGAGGTaGGTGTTTGTGTTCCTGAGT | + |
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Preference number: 2 (lower is better) Translates to: FSNRFLLCGHKGFIWFIGTGTKR*VFVFLS Trigger: ACTCAGGAACACAAACACTCACCTCTTGGTTCCAGT...ACCAATAAACCAGATAAAACCTTTGTGGCCACAAAGGAGAAAGCGATTAGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| 3UTR-3UTR TCA 90 bp | TTCTCTAATCGCTTTCTCCTTTGTGGCCACAAAGGTTTTATCTGGTTTATTGGTAATCCAGTCTGCATCTaGAGAGAGGTGAGGTTTTCC | + |
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Preference number: 2 (lower is better) Translates to: FSNRFLLCGHKGFIWFIGNPVCI*REVRFS Trigger: GGAAAACCTCACCTCTCTTCAGATGCAGACTGGATT...ACCAATAAACCAGATAAAACCTTTGTGGCCACAAAGGAGAAAGCGATTAGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| 3UTR CCA 72 bp | GCCTCTCCCAGCACTAGCCCAAGACCTAAAAGGGAGTaGGGACCAGAATCCAGTCTGCATCTGAAGAGAGGT | + |
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Preference number: 3 (lower is better) Translates to: ASPSTSPRPKRE*GPESSLHLKRG Trigger: ACCTCTCTTCAGATGCAGACTGGATTCTGGTCCCCACTCCCTTTTAGGTCTTGGGCTAGTGCTGGGAGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| 3UTR CCA 72 bp | GAAGATATTCTGAGTGCTTTGGGACACAGAAGGCCATaGGCGAGCACCACCTTTGTAGGAAAACACCTTCCC | + |
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Preference number: 3 (lower is better) Translates to: EDILSALGHRRP*ASTTFVGKHLP Trigger: GGGAAGGTGTTTTCCTACAAAGGTGGTGCTCGCCCATGGCCTTCTGTGTCCCAAAGCACTCAGAATATCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| 3UTR TCA 72 bp | GCCCCTGATGGCTGCATTTCACAGTGCAATATCCAATaGAGATATTCTGAGTGCTTTGGGACACAGAAGGCC | + |
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Preference number: 3 (lower is better) Translates to: APDGCISQCNIQ*RYSECFGTQKA Trigger: GGCCTTCTGTGTCCCAAAGCACTCAGAATATCTTCATTGGATATTGCACTGTGAAATGCAGCCATCAGGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| 3UTR TCA 72 bp | CAATTAGCTGCCAGTTTCTCTTTGGGGAAGACACTATaGAAGCCCATGAGTATAACCAGCAGACTGGGTGGG | + |
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Preference number: 3 (lower is better) Translates to: QLAASFSLGKTL*KPMSITSRLGG Trigger: CCCACCCAGTCTGCTGGTTATACTCATGGGCTTTCATAGTGTCTTCCCCAAAGAGAAACTGGCAGCTAATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| 3UTR TCA 72 bp | GTCTATTTTAAGAGCCACCTTCTACCTCTCTCCTCCTaGGGAGATAGCCTTATGTGTCAGAGTAGAGTGAGT | + |
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Preference number: 3 (lower is better) Translates to: VYFKSHLLPLSS*GDSLMCQSRVS Trigger: ACTCACTCTACTCTGACACATAAGGCTATCTCCTCAGGAGGAGAGAGGTAGAAGGTGGCTCTTAAAATAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| 3UTR CCA 72 bp | ACTATGAAAGCCCATGAGTATAACCAGCAGACTGGGTaGGTAAAAAGGTCAACTGAGATTGGTTTAAAAATA | + |
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Preference number: 3 (lower is better) Translates to: TMKAHEYNQQTG*VKRSTEIGLKI Trigger: TATTTTTAAACCAATCTCAGTTGACCTTTTTACCCACCCAGTCTGCTGGTTATACTCATGGGCTTTCATAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| 3UTR-3UTR CAA 90 bp | TTCTCTAATCGCTTTCTCCTTTGTGGCCACAAAGGTTTTATCTGGTTTATTGGTTTTCTTAGGATAATTTaGCAAGCATTCTCCACGAGA | + |
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Preference number: 3 (lower is better) Translates to: FSNRFLLCGHKGFIWFIGFLRII*QAFSTR Trigger: TCTCGTGGAGAATGCTTGCAAAATTATCCTAAGAAA...ACCAATAAACCAGATAAAACCTTTGTGGCCACAAAGGAGAAAGCGATTAGAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS-3UTR TCA 90 bp | AACACCTCCACGGCCTCTCCCAGCACTAGCCCAAGACCTAAAAGGGAGTGGGGAGTGACCGGGAAGAGGTaGGGCTCTAGGCTGCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: NTSTASPSTSPRPKREWGVTGKR*GSRLPS Trigger: GCTGGGCAGCCTAGAGCCTCACCTCTTCCCGGTCAC...TCCCCACTCCCTTTTAGGTCTTGGGCTAGTGCTGGGAGAGGCCGTGGAGGTGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS-3UTR GCA 90 bp | AACACCTCCACGGCCTCTCCCAGCACTAGCCCAAGACCTAAAAGGGAGTGGGGATCAAGGACTGGGCCCTaGTGGGAGGGTGCTTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: NTSTASPSTSPRPKREWGSRTGP*WEGAWA Trigger: AGCCCAAGCACCCTCCCAGCAGGGCCCAGTCCTTGA...TCCCCACTCCCTTTTAGGTCTTGGGCTAGTGCTGGGAGAGGCCGTGGAGGTGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS-3UTR GCA 90 bp | AACACCTCCACGGCCTCTCCCAGCACTAGCCCAAGACCTAAAAGGGAGTGGGGATGGGGAGTGCTGAACTaGTGGGACGGACAGAGACGC | + |
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Preference number: 4 (lower is better) Translates to: NTSTASPSTSPRPKREWGWGVLN*WDGQRR Trigger: GCGTCTCTGTCCGTCCCAGCAGTTCAGCACTCCCCA...TCCCCACTCCCTTTTAGGTCTTGGGCTAGTGCTGGGAGAGGCCGTGGAGGTGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS-3UTR CCA 90 bp | AACACCTCCACGGCCTCTCCCAGCACTAGCCCAAGACCTAAAAGGGAGTGGGGAAGCCGCTGGGCTGGGTaGAGTAGCTGGTGTCCATCT | + |
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Preference number: 4 (lower is better) Translates to: NTSTASPSTSPRPKREWGSRWAG*SSWCPS Trigger: AGATGGACACCAGCTACTCCACCCAGCCCAGCGGCT...TCCCCACTCCCTTTTAGGTCTTGGGCTAGTGCTGGGAGAGGCCGTGGAGGTGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS-3UTR CCA 90 bp | AACACCTCCACGGCCTCTCCCAGCACTAGCCCAAGACCTAAAAGGGAGTGGGGAGGAGTGCTGAACTGCTaGGACGGACAGAGACGCTGG | + |
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Preference number: 4 (lower is better) Translates to: NTSTASPSTSPRPKREWGGVLNC*DGQRRW Trigger: CCAGCGTCTCTGTCCGTCCCAGCAGTTCAGCACTCC...TCCCCACTCCCTTTTAGGTCTTGGGCTAGTGCTGGGAGAGGCCGTGGAGGTGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS-3UTR TCA 90 bp | AACACCTCCACGGCCTCTCCCAGCACTAGCCCAAGACCTAAAAGGGAGTGGGGAACAAGGAGTAGCAACTaGACACCAGGACCACGACCC | + |
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Preference number: 4 (lower is better) Translates to: NTSTASPSTSPRPKREWGTRSSN*TPGPRP Trigger: GGGTCGTGGTCCTGGTGTTCAGTTGCTACTCCTTGT...TCCCCACTCCCTTTTAGGTCTTGGGCTAGTGCTGGGAGAGGCCGTGGAGGTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS-3UTR TCA 90 bp | AACACCTCCACGGCCTCTCCCAGCACTAGCCCAAGACCTAAAAGGGAGTGGGGAGACCGAAGCAATGCGTaGGGGCATGCCCAGAATGAA | + |
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Preference number: 4 (lower is better) Translates to: NTSTASPSTSPRPKREWGDRSNA*GHAQNE Trigger: TTCATTCTGGGCATGCCCTCACGCATTGCTTCGGTC...TCCCCACTCCCTTTTAGGTCTTGGGCTAGTGCTGGGAGAGGCCGTGGAGGTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS-3UTR TCA 90 bp | CCCCTCCCTGCACTGTCGCACCTAGGCAGAGAGCCTTCTCTAATCGCTTTCTCCGCAGATAGCCAGTCATaGAGAAGCCCAGTGTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: PLPALSHLGREPSLIAFSADSQS*RSPVCQ Trigger: CTGGCACACTGGGCTTCTTCATGACTGGCTATCTGC...GGAGAAAGCGATTAGAGAAGGCTCTCTGCCTAGGTGCGACAGTGCAGGGAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS-3UTR TCA 90 bp | CCCCTCCCTGCACTGTCGCACCTAGGCAGAGAGCCTTCTCTAATCGCTTTCTCCGTTGAGGAGGCCAGATaGCACGCCTTCAGATTCTGG | + |
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Preference number: 4 (lower is better) Translates to: PLPALSHLGREPSLIAFSVEEAR*HAFRFW Trigger: CCAGAATCTGAAGGCGTGTCATCTGGCCTCCTCAAC...GGAGAAAGCGATTAGAGAAGGCTCTCTGCCTAGGTGCGACAGTGCAGGGAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS-3UTR GCA 90 bp | CCCCTCCCTGCACTGTCGCACCTAGGCAGAGAGCCTTCTCTAATCGCTTTCTCCACCAGACCGAAGCAATaGGTGAGGGCATGCCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: PLPALSHLGREPSLIAFSTRPKQ*VRACPE Trigger: TTCTGGGCATGCCCTCACGCATTGCTTCGGTCTGGT...GGAGAAAGCGATTAGAGAAGGCTCTCTGCCTAGGTGCGACAGTGCAGGGAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS-3UTR GCA 90 bp | AACACCTCCACGGCCTCTCCCAGCACTAGCCCAAGACCTAAAAGGGAGTGGGGATCTTCCCCCGGGAAGTaGAAGATCACCATGCGATTC | + |
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Preference number: 4 (lower is better) Translates to: NTSTASPSTSPRPKREWGSSPGK*KITMRF Trigger: GAATCGCATGGTGATCTTGCACTTCCCGGGGGAAGA...TCCCCACTCCCTTTTAGGTCTTGGGCTAGTGCTGGGAGAGGCCGTGGAGGTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS-3UTR CCA 90 bp | CCCCTCCCTGCACTGTCGCACCTAGGCAGAGAGCCTTCTCTAATCGCTTTCTCCCACGCCTTCAGATTCTaGGTATGTGAGCTCCACAGC | + |
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Preference number: 4 (lower is better) Translates to: PLPALSHLGREPSLIAFSHAFRF*VCELHS Trigger: GCTGTGGAGCTCACATACCCAGAATCTGAAGGCGTG...GGAGAAAGCGATTAGAGAAGGCTCTCTGCCTAGGTGCGACAGTGCAGGGAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS-3UTR CCA 90 bp | AACACCTCCACGGCCTCTCCCAGCACTAGCCCAAGACCTAAAAGGGAGTGGGGACCTCCTCCTGGACTTTaGTCTCAGGAGCATCCTTGT | + |
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Preference number: 4 (lower is better) Translates to: NTSTASPSTSPRPKREWGPPPGL*SQEHPC Trigger: ACAAGGATGCTCCTGAGACCAAAGTCCAGGAGGAGG...TCCCCACTCCCTTTTAGGTCTTGGGCTAGTGCTGGGAGAGGCCGTGGAGGTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS-3UTR GCA 90 bp | CCCCTCCCTGCACTGTCGCACCTAGGCAGAGAGCCTTCTCTAATCGCTTTCTCCCAGAATGAAGACCTGTaGCACAGAGCAGATGACCTG | + |
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Preference number: 4 (lower is better) Translates to: PLPALSHLGREPSLIAFSQNEDL*HRADDL Trigger: CAGGTCATCTGCTCTGTGGCACAGGTCTTCATTCTG...GGAGAAAGCGATTAGAGAAGGCTCTCTGCCTAGGTGCGACAGTGCAGGGAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS-3UTR GCA 90 bp | AACACCTCCACGGCCTCTCCCAGCACTAGCCCAAGACCTAAAAGGGAGTGGGGAAGGAGCATCCTTGTTTaGCCTCTGTCTCCGAAGATC | + |
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Preference number: 4 (lower is better) Translates to: NTSTASPSTSPRPKREWGRSILV*PLSPKI Trigger: GATCTTCGGAGACAGAGGGCAAACAAGGATGCTCCT...TCCCCACTCCCTTTTAGGTCTTGGGCTAGTGCTGGGAGAGGCCGTGGAGGTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS-3UTR TCA 90 bp | CCCCTCCCTGCACTGTCGCACCTAGGCAGAGAGCCTTCTCTAATCGCTTTCTCCGGTTCAGGTTCAAGGTaGATGTGTATACCACCATGC | + |
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Preference number: 4 (lower is better) Translates to: PLPALSHLGREPSLIAFSGSGSR*MCIPPC Trigger: GCATGGTGGTATACACATTCACCTTGAACCTGAACC...GGAGAAAGCGATTAGAGAAGGCTCTCTGCCTAGGTGCGACAGTGCAGGGAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS-3UTR CCA 90 bp | AACACCTCCACGGCCTCTCCCAGCACTAGCCCAAGACCTAAAAGGGAGTGGGGATCAGCATGTAGCACATaGACAGCCAATCAATGGCAA | + |
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Preference number: 4 (lower is better) Translates to: NTSTASPSTSPRPKREWGSACST*TANQWQ Trigger: TTGCCATTGATTGGCTGTCCATGTGCTACATGCTGA...TCCCCACTCCCTTTTAGGTCTTGGGCTAGTGCTGGGAGAGGCCGTGGAGGTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS-3UTR TCA 90 bp | AACACCTCCACGGCCTCTCCCAGCACTAGCCCAAGACCTAAAAGGGAGTGGGGATCAATAATCTGGCCTTaGGAGATGGTGAAAACGATC | + |
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Preference number: 4 (lower is better) Translates to: NTSTASPSTSPRPKREWGSIIWP*EMVKTI Trigger: GATCGTTTTCACCATCTCTCAAGGCCAGATTATTGA...TCCCCACTCCCTTTTAGGTCTTGGGCTAGTGCTGGGAGAGGCCGTGGAGGTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS-3UTR CCA 90 bp | AACACCTCCACGGCCTCTCCCAGCACTAGCCCAAGACCTAAAAGGGAGTGGGGATCTCCTTGTAGGTTTTaGATTTATCCAGCCAGATGC | + |
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Preference number: 4 (lower is better) Translates to: NTSTASPSTSPRPKREWGSPCRF*IYPARC Trigger: GCATCTGGCTGGATAAATCCAAAACCTACAAGGAGA...TCCCCACTCCCTTTTAGGTCTTGGGCTAGTGCTGGGAGAGGCCGTGGAGGTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS-3UTR CCA 90 bp | AACACCTCCACGGCCTCTCCCAGCACTAGCCCAAGACCTAAAAGGGAGTGGGGAAATACTACCCACAAATaGTTCAGGTTCAAGGTGAAT | + |
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Preference number: 4 (lower is better) Translates to: NTSTASPSTSPRPKREWGNTTHK*FRFKVN Trigger: ATTCACCTTGAACCTGAACCATTTGTGGGTAGTATT...TCCCCACTCCCTTTTAGGTCTTGGGCTAGTGCTGGGAGAGGCCGTGGAGGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS-3UTR CCA 90 bp | TTCTCTAATCGCTTTCTCCTTTGTGGCCACAAAGGTTTTATCTGGTTTATTGGTATGGAGACACTGGGGTaGCCTGAGACGCTGGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: FSNRFLLCGHKGFIWFIGMETLG*PETLGW Trigger: CCACCCCAGCGTCTCAGGCCACCCCAGTGTCTCCAT...ACCAATAAACCAGATAAAACCTTTGTGGCCACAAAGGAGAAAGCGATTAGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS-3UTR CCA 90 bp | TTCTCTAATCGCTTTCTCCTTTGTGGCCACAAAGGTTTTATCTGGTTTATTGGTAGGACTGGGCCCTGCTaGGAGGGTGCTTGGGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: FSNRFLLCGHKGFIWFIGRTGPC*EGAWAS Trigger: AGAAGCCCAAGCACCCTCCCAGCAGGGCCCAGTCCT...ACCAATAAACCAGATAAAACCTTTGTGGCCACAAAGGAGAAAGCGATTAGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| 3UTR CAA 72 bp | CACAGTGCAATATCCAATGAAGATATTCTGAGTGCTTaGGGACACAGAAGGCCATGGGCGAGCACCACCTTT | + |
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Preference number: 4 (lower is better) Translates to: HSAISNEDILSA*GHRRPWASTTF Trigger: AAAGGTGGTGCTCGCCCATGGCCTTCTGTGTCCCAAAGCACTCAGAATATCTTCATTGGATATTGCACTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS-3UTR GCA 90 bp | TTCTCTAATCGCTTTCTCCTTTGTGGCCACAAAGGTTTTATCTGGTTTATTGGTGGTGAGGCTCTAGGCTaGCCAGCTTTACCCAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: FSNRFLLCGHKGFIWFIGGEALG*PALPRL Trigger: GAGCCTGGGTAAAGCTGGGCAGCCTAGAGCCTCACC...ACCAATAAACCAGATAAAACCTTTGTGGCCACAAAGGAGAAAGCGATTAGAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS-3UTR TCA 90 bp | TTCTCTAATCGCTTTCTCCTTTGTGGCCACAAAGGTTTTATCTGGTTTATTGGTACAGAGCAGATGACCTaGCCCACCATTGTGACCGGG | + |
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Preference number: 4 (lower is better) Translates to: FSNRFLLCGHKGFIWFIGTEQMT*PTIVTG Trigger: CCCGGTCACAATGGTGGGTCAGGTCATCTGCTCTGT...ACCAATAAACCAGATAAAACCTTTGTGGCCACAAAGGAGAAAGCGATTAGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS-3UTR GCA 90 bp | TTCTCTAATCGCTTTCTCCTTTGTGGCCACAAAGGTTTTATCTGGTTTATTGGTGCCCTGCTGGGAGGGTaGTTGGGCTTCTCCTTGAAT | + |
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Preference number: 4 (lower is better) Translates to: FSNRFLLCGHKGFIWFIGALLGG*LGFSLN Trigger: ATTCAAGGAGAAGCCCAAGCACCCTCCCAGCAGGGC...ACCAATAAACCAGATAAAACCTTTGTGGCCACAAAGGAGAAAGCGATTAGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS-3UTR TCA 90 bp | TTCTCTAATCGCTTTCTCCTTTGTGGCCACAAAGGTTTTATCTGGTTTATTGGTCAGGCAATTGAGAGCTaGGCCGGTGATAGCGATGGT | + |
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Preference number: 4 (lower is better) Translates to: FSNRFLLCGHKGFIWFIGQAIES*AGDSDG Trigger: ACCATCGCTATCACCGGCTCAGCTCTCAATTGCCTG...ACCAATAAACCAGATAAAACCTTTGTGGCCACAAAGGAGAAAGCGATTAGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS-3UTR TCA 90 bp | TTCTCTAATCGCTTTCTCCTTTGTGGCCACAAAGGTTTTATCTGGTTTATTGGTCACGGAGCAGGCTGTTaGAACCTCATCAGCTCCAAA | + |
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Preference number: 4 (lower is better) Translates to: FSNRFLLCGHKGFIWFIGHGAGC*NLISSK Trigger: TTTGGAGCTGATGAGGTTTCAACAGCCTGCTCCGTG...ACCAATAAACCAGATAAAACCTTTGTGGCCACAAAGGAGAAAGCGATTAGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS-3UTR TCA 90 bp | TTCTCTAATCGCTTTCTCCTTTGTGGCCACAAAGGTTTTATCTGGTTTATTGGTTTGATGGAGCCGTACTaGATCCACTGGAAGGCATTG | + |
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Preference number: 4 (lower is better) Translates to: FSNRFLLCGHKGFIWFIGLMEPY*IHWKAL Trigger: CAATGCCTTCCAGTGGATTCAGTACGGCTCCATCAA...ACCAATAAACCAGATAAAACCTTTGTGGCCACAAAGGAGAAAGCGATTAGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS-3UTR TCA 90 bp | TTCTCTAATCGCTTTCTCCTTTGTGGCCACAAAGGTTTTATCTGGTTTATTGGTGCTTTTCCGGGTCTTTaGTGTTGGGTACCAGAACAG | + |
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Preference number: 4 (lower is better) Translates to: FSNRFLLCGHKGFIWFIGAFPGL*CWVPEQ Trigger: CTGTTCTGGTACCCAACATCAAAGACCCGGAAAAGC...ACCAATAAACCAGATAAAACCTTTGTGGCCACAAAGGAGAAAGCGATTAGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS-3UTR TCA 90 bp | TTCTCTAATCGCTTTCTCCTTTGTGGCCACAAAGGTTTTATCTGGTTTATTGGTTGCCCACCAGAGTCATaGTATACACTACCAGGGTTG | + |
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Preference number: 4 (lower is better) Translates to: FSNRFLLCGHKGFIWFIGCPPES*YTLPGL Trigger: CAACCCTGGTAGTGTATATCATGACTCTGGTGGGCA...ACCAATAAACCAGATAAAACCTTTGTGGCCACAAAGGAGAAAGCGATTAGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS-3UTR GCA 90 bp | TTCTCTAATCGCTTTCTCCTTTGTGGCCACAAAGGTTTTATCTGGTTTATTGGTCAATTCCAAGCTGATTaGCAAACACAGCCACGGAGC | + |
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Preference number: 4 (lower is better) Translates to: FSNRFLLCGHKGFIWFIGQFQAD*QTQPRS Trigger: GCTCCGTGGCTGTGTTTGGCAATCAGCTTGGAATTG...ACCAATAAACCAGATAAAACCTTTGTGGCCACAAAGGAGAAAGCGATTAGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS-3UTR TCA 90 bp | TTCTCTAATCGCTTTCTCCTTTGTGGCCACAAAGGTTTTATCTGGTTTATTGGTATTGCAATTCCAAGCTaGTTGCCAAACACAGCCACG | + |
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Preference number: 4 (lower is better) Translates to: FSNRFLLCGHKGFIWFIGIAIPS*LPNTAT Trigger: CGTGGCTGTGTTTGGCAATCAGCTTGGAATTGCAAT...ACCAATAAACCAGATAAAACCTTTGTGGCCACAAAGGAGAAAGCGATTAGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS-3UTR TCA 90 bp | TTCTCTAATCGCTTTCTCCTTTGTGGCCACAAAGGTTTTATCTGGTTTATTGGTCAAACATTCCTGCAATaGCGATGGTCAGACCGATTC | + |
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Preference number: 4 (lower is better) Translates to: FSNRFLLCGHKGFIWFIGQTFLQ*RWSDRF Trigger: GAATCGGTCTGACCATCGTCATTGCAGGAATGTTTG...ACCAATAAACCAGATAAAACCTTTGTGGCCACAAAGGAGAAAGCGATTAGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS-3UTR TCA 90 bp | TTCTCTAATCGCTTTCTCCTTTGTGGCCACAAAGGTTTTATCTGGTTTATTGGTATCCAGCCAGATGCCTaGGATCATAGCACCAAACAT | + |
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Preference number: 4 (lower is better) Translates to: FSNRFLLCGHKGFIWFIGIQPDA*DHSTKH Trigger: ATGTTTGGTGCTATGATCTCAGGCATCTGGCTGGAT...ACCAATAAACCAGATAAAACCTTTGTGGCCACAAAGGAGAAAGCGATTAGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS-3UTR TCA 90 bp | TTCTCTAATCGCTTTCTCCTTTGTGGCCACAAAGGTTTTATCTGGTTTATTGGTGGCCTTGAGAGATGGTaGAAACGATCCCAAATACCT | + |
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Preference number: 4 (lower is better) Translates to: FSNRFLLCGHKGFIWFIGGLERW*KRSQIP Trigger: AGGTATTTGGGATCGTTTTCACCATCTCTCAAGGCC...ACCAATAAACCAGATAAAACCTTTGTGGCCACAAAGGAGAAAGCGATTAGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS-3UTR CCA 90 bp | TTCTCTAATCGCTTTCTCCTTTGTGGCCACAAAGGTTTTATCTGGTTTATTGGTTGCGATTCAGCAGAGTaGATAAGGCGTAGAAAGCAC | + |
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Preference number: 4 (lower is better) Translates to: FSNRFLLCGHKGFIWFIGCDSAE*IRRRKH Trigger: GTGCTTTCTACGCCTTATCCACTCTGCTGAATCGCA...ACCAATAAACCAGATAAAACCTTTGTGGCCACAAAGGAGAAAGCGATTAGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS-3UTR GCA 90 bp | TTCTCTAATCGCTTTCTCCTTTGTGGCCACAAAGGTTTTATCTGGTTTATTGGTGACCAAAAACCCAATTaGAATTCCAAGCTGATTGCC | + |
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Preference number: 4 (lower is better) Translates to: FSNRFLLCGHKGFIWFIGDQKPN*NSKLIA Trigger: GGCAATCAGCTTGGAATTGCAATTGGGTTTTTGGTC...ACCAATAAACCAGATAAAACCTTTGTGGCCACAAAGGAGAAAGCGATTAGAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| 3UTR CAA 72 bp | TTCTCCTTTGTGGCCACAAAGGTTTTATCTGGTTTATaGGTGTTTAGTCTCCTTGACTCTAGGAAAGACGAT | + |
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Preference number: 4 (lower is better) Translates to: FSFVATKVLSGL*VFSLLDSRKDD Trigger: ATCGTCTTTCCTAGAGTCAAGGAGACTAAACACCAATAAACCAGATAAAACCTTTGTGGCCACAAAGGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS-3UTR CAA 90 bp | CCCCTCCCTGCACTGTCGCACCTAGGCAGAGAGCCTTCTCTAATCGCTTTCTCCGGTCAAACCGCTGGGTaGAGCCAAGGTACTGGGGAG | + |
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Preference number: 5 (lower is better) Translates to: PLPALSHLGREPSLIAFSGQTAG*SQGTGE Trigger: CTCCCCAGTACCTTGGCTCAACCCAGCGGTTTGACC...GGAGAAAGCGATTAGAGAAGGCTCTCTGCCTAGGTGCGACAGTGCAGGGAGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS-3UTR CAA 90 bp | CCCCTCCCTGCACTGTCGCACCTAGGCAGAGAGCCTTCTCTAATCGCTTTCTCCACGACCCAACGACGCTaGCTCACCTTGATCACGCTG | + |
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Preference number: 5 (lower is better) Translates to: PLPALSHLGREPSLIAFSTTQRR*LTLITL Trigger: CAGCGTGATCAAGGTGAGCAAGCGTCGTTGGGTCGT...GGAGAAAGCGATTAGAGAAGGCTCTCTGCCTAGGTGCGACAGTGCAGGGAGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS-3UTR CAA 90 bp | CCCCTCCCTGCACTGTCGCACCTAGGCAGAGAGCCTTCTCTAATCGCTTTCTCCCAGGCTCCCAGGCAATaGAGAGCTGAGCCGGTGATA | + |
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Preference number: 5 (lower is better) Translates to: PLPALSHLGREPSLIAFSQAPRQ*RAEPVI Trigger: TATCACCGGCTCAGCTCTCAATTGCCTGGGAGCCTG...GGAGAAAGCGATTAGAGAAGGCTCTCTGCCTAGGTGCGACAGTGCAGGGAGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS-3UTR CAA 90 bp | AACACCTCCACGGCCTCTCCCAGCACTAGCCCAAGACCTAAAAGGGAGTGGGGATCCTCCTCCTGGACTTaGGTCTCAGGAGCATCCTTG | + |
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Preference number: 5 (lower is better) Translates to: NTSTASPSTSPRPKREWGSSSWT*VSGASL Trigger: CAAGGATGCTCCTGAGACCAAAGTCCAGGAGGAGGA...TCCCCACTCCCTTTTAGGTCTTGGGCTAGTGCTGGGAGAGGCCGTGGAGGTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS-3UTR CAA 90 bp | AACACCTCCACGGCCTCTCCCAGCACTAGCCCAAGACCTAAAAGGGAGTGGGGAACCAGCAGCACGAAGTaGAGGTTTTTGAAGAGTCGG | + |
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Preference number: 5 (lower is better) Translates to: NTSTASPSTSPRPKREWGTSSTK*RFLKSR Trigger: CCGACTCTTCAAAAACCTCAACTTCGTGCTGCTGGT...TCCCCACTCCCTTTTAGGTCTTGGGCTAGTGCTGGGAGAGGCCGTGGAGGTGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS-3UTR CAA 90 bp | AACACCTCCACGGCCTCTCCCAGCACTAGCCCAAGACCTAAAAGGGAGTGGGGAAGCTTTTCCGGGTCTTaGATGTTGGGTACCAGAACA | + |
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Preference number: 5 (lower is better) Translates to: NTSTASPSTSPRPKREWGSFSGS*MLGTRT Trigger: TGTTCTGGTACCCAACATCAAAGACCCGGAAAAGCT...TCCCCACTCCCTTTTAGGTCTTGGGCTAGTGCTGGGAGAGGCCGTGGAGGTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS-3UTR CAA 90 bp | CCCCTCCCTGCACTGTCGCACCTAGGCAGAGAGCCTTCTCTAATCGCTTTCTCCGTCAATAATCTGGCCTaGAGAGATGGTGAAAACGAT | + |
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Preference number: 5 (lower is better) Translates to: PLPALSHLGREPSLIAFSVNNLA*RDGEND Trigger: ATCGTTTTCACCATCTCTCAAGGCCAGATTATTGAC...GGAGAAAGCGATTAGAGAAGGCTCTCTGCCTAGGTGCGACAGTGCAGGGAGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS TCA 90 bp | CAGGGTTGTCTCCTTGTAGGTTTTGGATTTATCCAGCCAGATGCCTaGGATCATAGCACCAAACATTCCTGCAATGACGATGGTCAGACC | + |
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Preference number: 5 (lower is better) Translates to: QGCLLVGFGFIQPDA*DHSTKHSCNDDGQT Trigger: GGTCTGACCATCGTCATTGCAGGAATGTTTGGTGCTATGATCTCAGGCATCTGGCTGGATAAATCCAAAACCTACAAGGAGACAACCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS-3UTR CAA 90 bp | TTCTCTAATCGCTTTCTCCTTTGTGGCCACAAAGGTTTTATCTGGTTTATTGGTCTGCTGGGAGGGTGCTaGGGCTTCTCCTTGAATACG | + |
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Preference number: 5 (lower is better) Translates to: FSNRFLLCGHKGFIWFIGLLGGC*GFSLNT Trigger: CGTATTCAAGGAGAAGCCCAAGCACCCTCCCAGCAG...ACCAATAAACCAGATAAAACCTTTGTGGCCACAAAGGAGAAAGCGATTAGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS TCA 90 bp | AAGATGTTCCCAAACATGGTTCCATGGTTGTCAATAATCTGGCCTTaGGAGATGGTGAAAACGATCCCAAATACCTGTGCCGACACGTTG | + |
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Preference number: 5 (lower is better) Translates to: KMFPNMVPWLSIIWP*EMVKTIPNTCADTL Trigger: CAACGTGTCGGCACAGGTATTTGGGATCGTTTTCACCATCTCTCAAGGCCAGATTATTGACAACCATGGAACCATGTTTGGGAACATCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS-3UTR CAA 90 bp | TTCTCTAATCGCTTTCTCCTTTGTGGCCACAAAGGTTTTATCTGGTTTATTGGTGTCTCAGGAGCATCCTaGTTTGCCCTCTGTCTCCGA | + |
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Preference number: 5 (lower is better) Translates to: FSNRFLLCGHKGFIWFIGVSGAS*FALCLR Trigger: TCGGAGACAGAGGGCAAACAAGGATGCTCCTGAGAC...ACCAATAAACCAGATAAAACCTTTGTGGCCACAAAGGAGAAAGCGATTAGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS-3UTR CAA 90 bp | TTCTCTAATCGCTTTCTCCTTTGTGGCCACAAAGGTTTTATCTGGTTTATTGGTGGACCAAAAACCCAATaGCAATTCCAAGCTGATTGC | + |
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Preference number: 5 (lower is better) Translates to: FSNRFLLCGHKGFIWFIGGPKTQ*QFQADC Trigger: GCAATCAGCTTGGAATTGCAATTGGGTTTTTGGTCC...ACCAATAAACCAGATAAAACCTTTGTGGCCACAAAGGAGAAAGCGATTAGAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS GCA 72 bp | CGCTGGGTTGAGCCAAGGTACTGGGGAGTGCTGAACTaGTGGGACGGACAGAGACGCTGGGGTCGATGGAGA | + |
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Preference number: 6 (lower is better) Translates to: RWVEPRYWGVLN*WDGQRRWGRWR Trigger: TCTCCATCGACCCCAGCGTCTCTGTCCGTCCCAGCAGTTCAGCACTCCCCAGTACCTTGGCTCAACCCAGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS CCA 72 bp | TGGGTTGAGCCAAGGTACTGGGGAGTGCTGAACTGCTaGGACGGACAGAGACGCTGGGGTCGATGGAGACAC | + |
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Preference number: 6 (lower is better) Translates to: WVEPRYWGVLNC*DGQRRWGRWRH Trigger: GTGTCTCCATCGACCCCAGCGTCTCTGTCCGTCCCAGCAGTTCAGCACTCCCCAGTACCTTGGCTCAACCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS CCA 72 bp | TATGATGGGTCAAACCGCTGGGTTGAGCCAAGGTACTaGGGAGTGCTGAACTGCTGGGACGGACAGAGACGC | + |
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Preference number: 6 (lower is better) Translates to: YDGSNRWVEPRY*GVLNCWDGQRR Trigger: GCGTCTCTGTCCGTCCCAGCAGTTCAGCACTCCCCAGTACCTTGGCTCAACCCAGCGGTTTGACCCATCATA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS CCA 72 bp | TGCTCCCCTCCTCCTCCTCTTCCTCCTCCTGGACTTTaGTCTCAGGAGCATCCTTGTTTGCCCTCTGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: CSPPPPLPPPGL*SQEHPCLPSVS Trigger: GGAGACAGAGGGCAAACAAGGATGCTCCTGAGACCAAAGTCCAGGAGGAGGAAGAGGAGGAGGAGGGGAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS CAA 72 bp | TCTAGGCTGCCCAGCTTTACCCAGGCTCCCAGGCAATaGAGAGCTGAGCCGGTGATAGCGATGGTTCGAAGA | + |
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Preference number: 6 (lower is better) Translates to: SRLPSFTQAPRQ*RAEPVIAMVRR Trigger: TCTTCGAACCATCGCTATCACCGGCTCAGCTCTCAATTGCCTGGGAGCCTGGGTAAAGCTGGGCAGCCTAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS TCA 72 bp | GAATCCACTGGAAGGCATTGCACAAGGAGTAGCAACTaGACACCAGGACCACGACCCAACGACGCTTGCTCA | + |
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Preference number: 6 (lower is better) Translates to: ESTGRHCTRSSN*TPGPRPNDACS Trigger: TGAGCAAGCGTCGTTGGGTCGTGGTCCTGGTGTTCAGTTGCTACTCCTTGTGCAATGCCTTCCAGTGGATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS TCA 72 bp | GCCCAGCTTTACCCAGGCTCCCAGGCAATTGAGAGCTaGGCCGGTGATAGCGATGGTTCGAAGACCAAATTT | + |
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Preference number: 6 (lower is better) Translates to: AQLYPGSQAIES*AGDSDGSKTKF Trigger: AAATTTGGTCTTCGAACCATCGCTATCACCGGCTCAGCTCTCAATTGCCTGGGAGCCTGGGTAAAGCTGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS TCA 72 bp | AACCTCATCAGCTCCAAACCAGACCGAAGCAATGCGTaGGGGCATGCCCAGAATGAAGACCTGTGCCACAGA | + |
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Preference number: 6 (lower is better) Translates to: NLISSKPDRSNA*GHAQNEDLCHR Trigger: TCTGTGGCACAGGTCTTCATTCTGGGCATGCCCTCACGCATTGCTTCGGTCTGGTTTGGAGCTGATGAGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS CCA 72 bp | AGAGTCGGACAATGGAACTTAAGTAGGAAGCATCAGTaGTCGCTAAGGCATAGCTCAAGGACTGGGCCCTGC | + |
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Preference number: 6 (lower is better) Translates to: RVGQWNLSRKHQ*SLRHSSRTGPC Trigger: GCAGGGCCCAGTCCTTGAGCTATGCCTTAGCGACCACTGATGCTTCCTACTTAAGTTCCATTGTCCGACTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS CAA 72 bp | CAAGCTGATTGCCAAACACAGCCACGGAGCAGGCTGTaGAAACCTCATCAGCTCCAAACCAGACCGAAGCAA | + |
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Preference number: 6 (lower is better) Translates to: QADCQTQPRSRL*KPHQLQTRPKQ Trigger: TTGCTTCGGTCTGGTTTGGAGCTGATGAGGTTTCAACAGCCTGCTCCGTGGCTGTGTTTGGCAATCAGCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS CAA 90 bp | TTGCAATTCCAAGCTGATTGCCAAACACAGCCACGGAGCAGGCTGTaGAAACCTCATCAGCTCCAAACCAGACCGAAGCAATGCGTGAGG | + |
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Preference number: 6 (lower is better) Translates to: LQFQADCQTQPRSRL*KPHQLQTRPKQCVR Trigger: CCTCACGCATTGCTTCGGTCTGGTTTGGAGCTGATGAGGTTTCAACAGCCTGCTCCGTGGCTGTGTTTGGCAATCAGCTTGGAATTGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS TCA 72 bp | AAGCTGATTGCCAAACACAGCCACGGAGCAGGCTGTTaGAACCTCATCAGCTCCAAACCAGACCGAAGCAAT | + |
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Preference number: 6 (lower is better) Translates to: KLIAKHSHGAGC*NLISSKPDRSN Trigger: ATTGCTTCGGTCTGGTTTGGAGCTGATGAGGTTTCAACAGCCTGCTCCGTGGCTGTGTTTGGCAATCAGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS GCA 72 bp | CATTCACTTCTTCCCCCGGGAAGTGCAAGATCACCATaGGATTCAGCAGAGTGGATAAGGCGTAGAAAGCAC | + |
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Preference number: 6 (lower is better) Translates to: HSLLPPGSARSP*DSAEWIRRRKH Trigger: GTGCTTTCTACGCCTTATCCACTCTGCTGAATCGCATGGTGATCTTGCACTTCCCGGGGGAAGAAGTGAATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS CCA 72 bp | CCGGGAAGTGCAAGATCACCATGCGATTCAGCAGAGTaGATAAGGCGTAGAAAGCACCAGCATTCAGACCAT | + |
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Preference number: 6 (lower is better) Translates to: PGSARSPCDSAE*IRRRKHQHSDH Trigger: ATGGTCTGAATGCTGGTGCTTTCTACGCCTTATCCACTCTGCTGAATCGCATGGTGATCTTGCACTTCCCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS CCA 72 bp | CCCAGTGTGCCAGCAGTGATGAATACTACCCACAAATaGTTCAGGTTCAAGGTGAATGTGTATACCACCATG | + |
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Preference number: 6 (lower is better) Translates to: PSVPAVMNTTHK*FRFKVNVYTTM Trigger: CATGGTGGTATACACATTCACCTTGAACCTGAACCATTTGTGGGTAGTATTCATCACTGCTGGCACACTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS CAA 90 bp | GAAGATGTTCCCAAACATGGTTCCATGGTTGTCAATAATCTGGCCTaGAGAGATGGTGAAAACGATCCCAAATACCTGTGCCGACACGTT | + |
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Preference number: 6 (lower is better) Translates to: EDVPKHGSMVVNNLA*RDGENDPKYLCRHV Trigger: AACGTGTCGGCACAGGTATTTGGGATCGTTTTCACCATCTCTCAAGGCCAGATTATTGACAACCATGGAACCATGTTTGGGAACATCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS TCA 72 bp | CCAAACATGGTTCCATGGTTGTCAATAATCTGGCCTTaGGAGATGGTGAAAACGATCCCAAATACCTGTGCC | + |
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Preference number: 6 (lower is better) Translates to: PNMVPWLSIIWP*EMVKTIPNTCA Trigger: GGCACAGGTATTTGGGATCGTTTTCACCATCTCTCAAGGCCAGATTATTGACAACCATGGAACCATGTTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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| CDS CAA 72 bp | CCCAAACATGGTTCCATGGTTGTCAATAATCTGGCCTaGAGAGATGGTGAAAACGATCCCAAATACCTGTGC | + |
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Preference number: 6 (lower is better) Translates to: PKHGSMVVNNLA*RDGENDPKYLC Trigger: GCACAGGTATTTGGGATCGTTTTCACCATCTCTCAAGGCCAGATTATTGACAACCATGGAACCATGTTTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040461.4 |
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