Pregenerated sensors for FLT3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042817Ensembl transcript IDs: ENSMUST00000049324.13
Found 151 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GTATTTACAAGAATATACTATATTTCAGATACATGGCTTTCCCCTCAAGCCTGGGTGCGAGGAGAGGTTTaGTTTTATAGAAGTCACTTT | + |
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Preference number: 2 (lower is better) Translates to: VFTRIYYISDTWLSPQAWVRGEV*FYRSHF Trigger: AAAGTGACTTCTATAAAATCAAACCTCTCCTCGCAC...CCAGGCTTGAGGGGAAAGCCATGTATCTGAAATATAGTATATTCTTGTAAATAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| 3UTR-3UTR CAA 90 bp | CCCCAGGGTAGGCGGGCTCACCAACAAGTCTCATTATTGGCTCTCCCACCTGTGGAGGCGAGGCTAATCTaGGCTCTGTGGTCTACAGCC | + |
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Preference number: 3 (lower is better) Translates to: PQGRRAHQQVSLLALPPVEARLI*ALWSTA Trigger: GGCTGTAGACCACAGAGCCAAGATTAGCCTCGCCTC...CACAGGTGGGAGAGCCAATAATGAGACTTGTTGGTGAGCCCGCCTACCCTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| 3UTR CCA 72 bp | CCCAGGGTAGGCGGGCTCACCAACAAGTCTCATTATTaGCTCTCCCACCTGTGCGAGGAGAGGTTTGATTTT | + |
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Preference number: 3 (lower is better) Translates to: PRVGGLTNKSHY*LSHLCEERFDF Trigger: AAAATCAAACCTCTCCTCGCACAGGTGGGAGAGCCAATAATGAGACTTGTTGGTGAGCCCGCCTACCCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| 3UTR TCA 72 bp | TCATTATTGGCTCTCCCACCTGTGCGAGGAGAGGTTTaGTTTTATAGAAGTCACTTTGGAGTAATGGCAGAC | + |
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Preference number: 3 (lower is better) Translates to: SLLALPPVRGEV*FYRSHFGVMAD Trigger: GTCTGCCATTACTCCAAAGTGACTTCTATAAAATCAAACCTCTCCTCGCACAGGTGGGAGAGCCAATAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| 3UTR GCA 72 bp | CTCACCAACAAGTCTCATTATTGGCTCTCCCACCTGTaGGAGGAGAGGTTTGATTTTATAGAAGTCACTTTG | + |
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Preference number: 3 (lower is better) Translates to: LTNKSHYWLSHL*EERFDFIEVTL Trigger: CAAAGTGACTTCTATAAAATCAAACCTCTCCTCGCACAGGTGGGAGAGCCAATAATGAGACTTGTTGGTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS-3UTR TCA 90 bp | CCCCAGGGTAGGCGGGCTCACCAACAAGTCTCATTATTGGCTCTCCCACCTGTGGCCGTGCGTTGCCCCTaGCGACGTAGCTGGAGTCGC | + |
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Preference number: 4 (lower is better) Translates to: PQGRRAHQQVSLLALPPVAVRCP*RRSWSR Trigger: GCGACTCCAGCTACGTCGTCAGGGGCAACGCACGGC...CACAGGTGGGAGAGCCAATAATGAGACTTGTTGGTGAGCCCGCCTACCCTGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS-3UTR TCA 90 bp | GGCAGACAGCATCTAGAGAAAAGTCCAGCGAAGCAACGGCCTGTAGGGCGCTTCTGGCGATGGCGGCTCTaGGCCTGCCTCTCTGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: GRQHLEKSPAKQRPVGRFWRWRL*ACLSAE Trigger: CTCAGCAGAGAGGCAGGCTCAGAGCCGCCATCGCCA...GAAGCGCCCTACAGGCCGTTGCTTCGCTGGACTTTTCTCTAGATGCTGTCTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS-3UTR GCA 90 bp | GGTAGGCGGGCTCACCAACAAGTCTCATTATTGGCTCTCCCACCTGTGCGAGGACCTGGGGTGGCGAGCTaGACTTGCAGGGTGATGGAC | + |
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Preference number: 4 (lower is better) Translates to: GRRAHQQVSLLALPPVRGPGVAS*TCRVMD Trigger: GTCCATCACCCTGCAAGTGCAGCTCGCCACCCCAGG...TCCTCGCACAGGTGGGAGAGCCAATAATGAGACTTGTTGGTGAGCCCGCCTACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS-3UTR TCA 90 bp | GGTAGGCGGGCTCACCAACAAGTCTCATTATTGGCTCTCCCACCTGTGCGAGGACAAGTACACTGGCCCTaGCAGTGTGCATGCCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: GRRAHQQVSLLALPPVRGQVHWP*QCACPQ Trigger: CTGGGGGCATGCACACTGTCAGGGCCAGTGTACTTG...TCCTCGCACAGGTGGGAGAGCCAATAATGAGACTTGTTGGTGAGCCCGCCTACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS-3UTR TCA 90 bp | GGTAGGCGGGCTCACCAACAAGTCTCATTATTGGCTCTCCCACCTGTGCGAGGACCACCTTCCCGTGGGTaGCCAACACATTCCTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: GRRAHQQVSLLALPPVRGPPSRG*PTHSWL Trigger: CAGCCAGGAATGTGTTGGTCACCCACGGGAAGGTGG...TCCTCGCACAGGTGGGAGAGCCAATAATGAGACTTGTTGGTGAGCCCGCCTACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS-3UTR TCA 90 bp | GGTAGGCGGGCTCACCAACAAGTCTCATTATTGGCTCTCCCACCTGTGCGAGGACTTCCAGCTCCCAGGTaGGCCCGAATCCATGGTTCA | + |
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Preference number: 4 (lower is better) Translates to: GRRAHQQVSLLALPPVRGLPAPR*ARIHGS Trigger: TGAACCATGGATTCGGGCTCACCTGGGAGCTGGAAG...TCCTCGCACAGGTGGGAGAGCCAATAATGAGACTTGTTGGTGAGCCCGCCTACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS-3UTR GCA 90 bp | GGTAGGCGGGCTCACCAACAAGTCTCATTATTGGCTCTCCCACCTGTGCGAGGACAGCCCAGGGAGCTGTaGTTAAAGACCCAGAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: GRRAHQQVSLLALPPVRGQPREL*LKTQRQ Trigger: CTGCCTCTGGGTCTTTAAGCACAGCTCCCTGGGCTG...TCCTCGCACAGGTGGGAGAGCCAATAATGAGACTTGTTGGTGAGCCCGCCTACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS-3UTR CCA 90 bp | GGCAGACAGCATCTAGAGAAAAGTCCAGCGAAGCAACGGCCTGTAGGGCGCTTCAAATCAAAGTGCGGCTaGCAGCCCAGGGAGCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: GRQHLEKSPAKQRPVGRFKSKCG*QPRELC Trigger: GCACAGCTCCCTGGGCTGCCAGCCGCACTTTGATTT...GAAGCGCCCTACAGGCCGTTGCTTCGCTGGACTTTTCTCTAGATGCTGTCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS-3UTR TCA 90 bp | GGCAGACAGCATCTAGAGAAAAGTCCAGCGAAGCAACGGCCTGTAGGGCGCTTCCTGGCTGGGGTGCTTTaGGGAAGAGCAGGTGTAATA | + |
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Preference number: 4 (lower is better) Translates to: GRQHLEKSPAKQRPVGRFLAGVL*GRAGVI Trigger: TATTACACCTGCTCTTCCTCAAAGCACCCCAGCCAG...GAAGCGCCCTACAGGCCGTTGCTTCGCTGGACTTTTCTCTAGATGCTGTCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS-3UTR CCA 90 bp | CCCCAGGGTAGGCGGGCTCACCAACAAGTCTCATTATTGGCTCTCCCACCTGTGAGGTATTCTCCTGCCTaGGTCTCTGTCACGTTCAAG | + |
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Preference number: 4 (lower is better) Translates to: PQGRRAHQQVSLLALPPVRYSPA*VSVTFK Trigger: CTTGAACGTGACAGAGACCCAGGCAGGAGAATACCT...CACAGGTGGGAGAGCCAATAATGAGACTTGTTGGTGAGCCCGCCTACCCTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS-3UTR CCA 90 bp | CCCCAGGGTAGGCGGGCTCACCAACAAGTCTCATTATTGGCTCTCCCACCTGTGCGTGCATCGGATTCGTaGGTACGCTTTAAACCTGAC | + |
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Preference number: 4 (lower is better) Translates to: PQGRRAHQQVSLLALPPVRASDS*VRFKPD Trigger: GTCAGGTTTAAAGCGTACCCACGAATCCGATGCACG...CACAGGTGGGAGAGCCAATAATGAGACTTGTTGGTGAGCCCGCCTACCCTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS-3UTR CCA 90 bp | CCCCAGGGTAGGCGGGCTCACCAACAAGTCTCATTATTGGCTCTCCCACCTGTGGGAATTCCATGCCTTTaGCCACTTGGTACGCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PQGRRAHQQVSLLALPPVGIPCL*PLGTQS Trigger: GCTTTGCGTACCAAGTGGCCAAAGGCATGGAATTCC...CACAGGTGGGAGAGCCAATAATGAGACTTGTTGGTGAGCCCGCCTACCCTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS-3UTR TCA 90 bp | GGTAGGCGGGCTCACCAACAAGTCTCATTATTGGCTCTCCCACCTGTGCGAGGATGTGGACACACGACTTaGACTCCAGGAATTCCATGC | + |
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Preference number: 4 (lower is better) Translates to: GRRAHQQVSLLALPPVRGCGHTT*TPGIPC Trigger: GCATGGAATTCCTGGAGTTCAAGTCGTGTGTCCACA...TCCTCGCACAGGTGGGAGAGCCAATAATGAGACTTGTTGGTGAGCCCGCCTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS-3UTR GCA 90 bp | GGTAGGCGGGCTCACCAACAAGTCTCATTATTGGCTCTCCCACCTGTGCGAGGATTTTGTAAATCAAAGTaGGGCTGGCAGCCCAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: GRRAHQQVSLLALPPVRGFCKSK*GWQPRE Trigger: CTCCCTGGGCTGCCAGCCGCACTTTGATTTACAAAA...TCCTCGCACAGGTGGGAGAGCCAATAATGAGACTTGTTGGTGAGCCCGCCTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS-3UTR GCA 90 bp | GGTAGGCGGGCTCACCAACAAGTCTCATTATTGGCTCTCCCACCTGTGCGAGGAATACATCGCTTCTTCTaGCTCTGCCAGCTGACATCC | + |
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Preference number: 4 (lower is better) Translates to: GRRAHQQVSLLALPPVRGIHRFF*LCQLTS Trigger: GGATGTCAGCTGGCAGAGGCAGAAGAAGCGATGTAT...TCCTCGCACAGGTGGGAGAGCCAATAATGAGACTTGTTGGTGAGCCCGCCTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS-3UTR CCA 90 bp | GGTAGGCGGGCTCACCAACAAGTCTCATTATTGGCTCTCCCACCTGTGCGAGGAGTGAGCCCGAATCCATaGTTCACATGGATGGCCTTA | + |
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Preference number: 4 (lower is better) Translates to: GRRAHQQVSLLALPPVRGVSPNP*FTWMAL Trigger: TAAGGCCATCCATGTGAACCATGGATTCGGGCTCAC...TCCTCGCACAGGTGGGAGAGCCAATAATGAGACTTGTTGGTGAGCCCGCCTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS-3UTR CCA 90 bp | CCCCAGGGTAGGCGGGCTCACCAACAAGTCTCATTATTGGCTCTCCCACCTGTGCTGCTCGACACCCACTaGCCAAACACTTTTCTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: PQGRRAHQQVSLLALPPVLLDTH*PNTFLL Trigger: TAACAGAAAAGTGTTTGGCCAGTGGGTGTCGAGCAG...CACAGGTGGGAGAGCCAATAATGAGACTTGTTGGTGAGCCCGCCTACCCTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS-3UTR CCA 90 bp | GGCAGACAGCATCTAGAGAAAAGTCCAGCGAAGCAACGGCCTGTAGGGCGCTTCTCATGGTGTCCCAGGTaGGTCATCATTTTGAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: GRQHLEKSPAKQRPVGRFSWCPR*VIILSS Trigger: GGAGCTCAAAATGATGACCCACCTGGGACACCATGA...GAAGCGCCCTACAGGCCGTTGCTTCGCTGGACTTTTCTCTAGATGCTGTCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS-3UTR CCA 90 bp | CCCCAGGGTAGGCGGGCTCACCAACAAGTCTCATTATTGGCTCTCCCACCTGTGGTGAACCAGGCATGCTaGAATTTGAATGTGCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: PQGRRAHQQVSLLALPPVVNQAC*NLNVPG Trigger: TCCAGGCACATTCAAATTCCAGCATGCCTGGTTCAC...CACAGGTGGGAGAGCCAATAATGAGACTTGTTGGTGAGCCCGCCTACCCTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS-3UTR CCA 90 bp | GGCAGACAGCATCTAGAGAAAAGTCCAGCGAAGCAACGGCCTGTAGGGCGCTTCATGCCTTTGGCCACTTaGTACGCAAAGCAAAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: GRQHLEKSPAKQRPVGRFMPLAT*YAKQRR Trigger: CCTCCTTTGCTTTGCGTACCAAGTGGCCAAAGGCAT...GAAGCGCCCTACAGGCCGTTGCTTCGCTGGACTTTTCTCTAGATGCTGTCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS-3UTR TCA 90 bp | GGTAGGCGGGCTCACCAACAAGTCTCATTATTGGCTCTCCCACCTGTGCGAGGATGGATCATCTGCAGCTaGCTCTCGTACCTAAATTGC | + |
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Preference number: 4 (lower is better) Translates to: GRRAHQQVSLLALPPVRGWIICS*LSYLNC Trigger: GCAATTTAGGTACGAGAGTCAGCTGCAGATGATCCA...TCCTCGCACAGGTGGGAGAGCCAATAATGAGACTTGTTGGTGAGCCCGCCTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS-3UTR TCA 90 bp | TGGAGTAATGGCAGACAGCATCTAGAGAAAAGTCCAGCGAAGCAACGGCCTGTAGGATGGCCGCTTCCTTaGGTCAAAAGCCCAGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: WSNGRQHLEKSPAKQRPVGWPLP*VKSPAG Trigger: TCCTGCTGGGCTTTTGACTCAAGGAAGCGGCCATCC...TACAGGCCGTTGCTTCGCTGGACTTTTCTCTAGATGCTGTCTGCCATTACTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS-3UTR TCA 90 bp | TGGAGTAATGGCAGACAGCATCTAGAGAAAAGTCCAGCGAAGCAACGGCCTGTATGGGGCAGTGTGCTCTaGGGAGCCTGGTTTAGATCT | + |
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Preference number: 4 (lower is better) Translates to: WSNGRQHLEKSPAKQRPVWGSVL*GAWFRS Trigger: AGATCTAAACCAGGCTCCTCAGAGCACACTGCCCCA...TACAGGCCGTTGCTTCGCTGGACTTTTCTCTAGATGCTGTCTGCCATTACTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS-3UTR TCA 90 bp | GGTAGGCGGGCTCACCAACAAGTCTCATTATTGGCTCTCCCACCTGTGCGAGGACTGTTCACAAGGAAATaGGGCTTGAGAGAAGATCCA | + |
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Preference number: 4 (lower is better) Translates to: GRRAHQQVSLLALPPVRGLFTRK*GLREDP Trigger: TGGATCTTCTCTCAAGCCTCATTTCCTTGTGAACAG...TCCTCGCACAGGTGGGAGAGCCAATAATGAGACTTGTTGGTGAGCCCGCCTACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS-3UTR TCA 90 bp | CCCCAGGGTAGGCGGGCTCACCAACAAGTCTCATTATTGGCTCTCCCACCTGTGGAATTAAATTCCCATTaGACCCTGAGAGCTGATCCA | + |
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Preference number: 4 (lower is better) Translates to: PQGRRAHQQVSLLALPPVELNSH*TLRADP Trigger: TGGATCAGCTCTCAGGGTTCAATGGGAATTTAATTC...CACAGGTGGGAGAGCCAATAATGAGACTTGTTGGTGAGCCCGCCTACCCTGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS-3UTR GCA 90 bp | GGCAGACAGCATCTAGAGAAAAGTCCAGCGAAGCAACGGCCTGTAGGGCGCTTCTCATATTTAGAGTACTaGTCGACACCCACTGGCCAA | + |
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Preference number: 4 (lower is better) Translates to: GRQHLEKSPAKQRPVGRFSYLEY*STPTGQ Trigger: TTGGCCAGTGGGTGTCGAGCAGTACTCTAAATATGA...GAAGCGCCCTACAGGCCGTTGCTTCGCTGGACTTTTCTCTAGATGCTGTCTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS-3UTR TCA 90 bp | GGCAGACAGCATCTAGAGAAAAGTCCAGCGAAGCAACGGCCTGTAGGGCGCTTCCGCTTTAAACCTGACTaGGAAGCAGAACTTTTCGTA | + |
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Preference number: 4 (lower is better) Translates to: GRQHLEKSPAKQRPVGRFRFKPD*EAELFV Trigger: TACGAAAAGTTCTGCTTCTCAGTCAGGTTTAAAGCG...GAAGCGCCCTACAGGCCGTTGCTTCGCTGGACTTTTCTCTAGATGCTGTCTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS-3UTR CCA 90 bp | GGTAGGCGGGCTCACCAACAAGTCTCATTATTGGCTCTCCCACCTGTGCGAGGATCATGGTCCTGTTTGTaGAGTAGGTACTCATCTCAA | + |
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Preference number: 4 (lower is better) Translates to: GRRAHQQVSLLALPPVRGSWSCL*SRYSSQ Trigger: TTGAGATGAGTACCTACTCCACAAACAGGACCATGA...TCCTCGCACAGGTGGGAGAGCCAATAATGAGACTTGTTGGTGAGCCCGCCTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS-3UTR CCA 90 bp | TGGAGTAATGGCAGACAGCATCTAGAGAAAAGTCCAGCGAAGCAACGGCCTGTATTCACCACCTTCCCGTaGGTGACCAACACATTCCTG | + |
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Preference number: 4 (lower is better) Translates to: WSNGRQHLEKSPAKQRPVFTTFP*VTNTFL Trigger: CAGGAATGTGTTGGTCACCCACGGGAAGGTGGTGAA...TACAGGCCGTTGCTTCGCTGGACTTTTCTCTAGATGCTGTCTGCCATTACTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS-3UTR TCA 90 bp | GGCAGACAGCATCTAGAGAAAAGTCCAGCGAAGCAACGGCCTGTAGGGCGCTTCCTCAAGAATCATTACTaGCAAAACAACAAGCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: GRQHLEKSPAKQRPVGRFLKNHY*QNNKQQ Trigger: CTGCTGCTTGTTGTTTTGTCAGTAATGATTCTTGAG...GAAGCGCCCTACAGGCCGTTGCTTCGCTGGACTTTTCTCTAGATGCTGTCTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS-3UTR TCA 90 bp | GGTAGGCGGGCTCACCAACAAGTCTCATTATTGGCTCTCCCACCTGTGCGAGGACATATTCATAGTCCCTaGAGTCAACGTAGAAGTACT | + |
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Preference number: 4 (lower is better) Translates to: GRRAHQQVSLLALPPVRGHIHSP*SQRRST Trigger: AGTACTTCTACGTTGACTTCAGGGACTATGAATATG...TCCTCGCACAGGTGGGAGAGCCAATAATGAGACTTGTTGGTGAGCCCGCCTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS-3UTR GCA 90 bp | TGGAGTAATGGCAGACAGCATCTAGAGAAAAGTCCAGCGAAGCAACGGCCTGTAGGAGATGCAGAGCAGTaGGTCCTGGTTTTCCATCTT | + |
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Preference number: 4 (lower is better) Translates to: WSNGRQHLEKSPAKQRPVGDAEQ*VLVFHL Trigger: AAGATGGAAAACCAGGACGCACTGCTCTGCATCTCC...TACAGGCCGTTGCTTCGCTGGACTTTTCTCTAGATGCTGTCTGCCATTACTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS-3UTR GCA 90 bp | TCACCAACAAGTCTCATTATTGGCTCTCCCACCTGTGCGAGGAGAGGTTTGATTCAACACATTCCTGGCTaGCAGGTCTCTGTGGACACA | + |
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Preference number: 4 (lower is better) Translates to: SPTSLIIGSPTCARRGLIQHIPG*QVSVDT Trigger: TGTGTCCACAGAGACCTGGCAGCCAGGAATGTGTTG...AATCAAACCTCTCCTCGCACAGGTGGGAGAGCCAATAATGAGACTTGTTGGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS-3UTR CCA 90 bp | TGGAGTAATGGCAGACAGCATCTAGAGAAAAGTCCAGCGAAGCAACGGCCTGTAAAAATGAAGTCAGGTTaGGGAAGGATGGCCGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: WSNGRQHLEKSPAKQRPVKMKSG*GRMAAS Trigger: GGAAGCGGCCATCCTTCCCCAACCTGACTTCATTTT...TACAGGCCGTTGCTTCGCTGGACTTTTCTCTAGATGCTGTCTGCCATTACTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS-3UTR GCA 90 bp | GGTAGGCGGGCTCACCAACAAGTCTCATTATTGGCTCTCCCACCTGTGCGAGGACTCTCGTACCTAAATTaGTTTTTGTATTTGTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: GRRAHQQVSLLALPPVRGLSYLN*FLYLWQ Trigger: CTGCCACAAATACAAAAAGCAATTTAGGTACGAGAG...TCCTCGCACAGGTGGGAGAGCCAATAATGAGACTTGTTGGTGAGCCCGCCTACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS-3UTR GCA 90 bp | TGGAGTAATGGCAGACAGCATCTAGAGAAAAGTCCAGCGAAGCAACGGCCTGTACTCGTGAACCAGGCATaGTGGAATTTGAATGTGCCT | + |
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Preference number: 4 (lower is better) Translates to: WSNGRQHLEKSPAKQRPVLVNQA*WNLNVP Trigger: AGGCACATTCAAATTCCAGCATGCCTGGTTCACGAG...TACAGGCCGTTGCTTCGCTGGACTTTTCTCTAGATGCTGTCTGCCATTACTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS-3UTR CCA 90 bp | TGGAGTAATGGCAGACAGCATCTAGAGAAAAGTCCAGCGAAGCAACGGCCTGTAGTTTTGGTAGATGGATaGATGTTCTGGGACGTTGCC | + |
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Preference number: 4 (lower is better) Translates to: WSNGRQHLEKSPAKQRPVVLVDG*MFWDVA Trigger: GGCAACGTCCCAGAACATCCATCCATCTACCAAAAC...TACAGGCCGTTGCTTCGCTGGACTTTTCTCTAGATGCTGTCTGCCATTACTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS-3UTR TCA 90 bp | TCACCAACAAGTCTCATTATTGGCTCTCCCACCTGTGCGAGGAGAGGTTTGATTGGTTTAGATCTATGGTaGACAGCTTGGTGCATTCGC | + |
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Preference number: 4 (lower is better) Translates to: SPTSLIIGSPTCARRGLIGLDLW*TAWCIR Trigger: GCGAATGCACCAAGCTGTTCACCATAGATCTAAACC...AATCAAACCTCTCCTCGCACAGGTGGGAGAGCCAATAATGAGACTTGTTGGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS-3UTR TCA 90 bp | TCACCAACAAGTCTCATTATTGGCTCTCCCACCTGTGCGAGGAGAGGTTTGATTATCTTCACCGCCACCTaGATTGAGACTCCCGTTTTA | + |
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Preference number: 4 (lower is better) Translates to: SPTSLIIGSPTCARRGLIIFTAT*IETPVL Trigger: TAAAACGGGAGTCTCAATTCAGGTGGCGGTGAAGAT...AATCAAACCTCTCCTCGCACAGGTGGGAGAGCCAATAATGAGACTTGTTGGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS-3UTR GCA 90 bp | TCACCAACAAGTCTCATTATTGGCTCTCCCACCTGTGCGAGGAGAGGTTTGATTGATGTTCTGGGACGTTaGCACCCATGTTCTGATACA | + |
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Preference number: 4 (lower is better) Translates to: SPTSLIIGSPTCARRGLIDVLGR*HPCSDT Trigger: TGTATCAGAACATGGGTGGCAACGTCCCAGAACATC...AATCAAACCTCTCCTCGCACAGGTGGGAGAGCCAATAATGAGACTTGTTGGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS-3UTR CCA 90 bp | TATTTACAAGAATATACTATATTTCAGATACATGGCTTTCCCCTCAAGCCTGGGGCACCCACTCCACAGTaGGCTCTGGAACACCCTCGG | + |
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Preference number: 4 (lower is better) Translates to: YLQEYTIFQIHGFPLKPGAPTPQ*ALEHPR Trigger: CCGAGGGTGTTCCAGAGCCCACTGTGGAGTGGGTGC...CCCAGGCTTGAGGGGAAAGCCATGTATCTGAAATATAGTATATTCTTGTAAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS-3UTR GCA 90 bp | GTATTTACAAGAATATACTATATTTCAGATACATGGCTTTCCCCTCAAGCCTGGGCTGACTGGCTGGGGTaGTTTGAGGAAGAGCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VFTRIYYISDTWLSPQAWADWLG*FEEEQV Trigger: CACCTGCTCTTCCTCAAAGCACCCCAGCCAGTCAGC...CCAGGCTTGAGGGGAAAGCCATGTATCTGAAATATAGTATATTCTTGTAAATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
||
| CDS-3UTR CCA 90 bp | TGGAGTAATGGCAGACAGCATCTAGAGAAAAGTCCAGCGAAGCAACGGCCTGTAGAATATGTACTCTCCTaGCTTGTTCTTATGATCGCA | + |
|
Preference number: 4 (lower is better) Translates to: WSNGRQHLEKSPAKQRPVEYVLS*LVLMIA Trigger: TGCGATCATAAGAACAAGCCAGGAGAGTACATATTC...TACAGGCCGTTGCTTCGCTGGACTTTTCTCTAGATGCTGTCTGCCATTACTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
||
| CDS-3UTR CCA 90 bp | TGGAGTAATGGCAGACAGCATCTAGAGAAAAGTCCAGCGAAGCAACGGCCTGTATTCTGTGGCATAGAATaGCTGCTCCATTTTAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: WSNGRQHLEKSPAKQRPVFCGIE*LLHFKS Trigger: GGATTTAAAATGGAGCAGCCATTCTATGCCACAGAA...TACAGGCCGTTGCTTCGCTGGACTTTTCTCTAGATGCTGTCTGCCATTACTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
||
| CDS-3UTR TCA 90 bp | TATTTACAAGAATATACTATATTTCAGATACATGGCTTTCCCCTCAAGCCTGGGTTGAACCCTGAGAGCTaGTCCAAGGGCGGGTGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: YLQEYTIFQIHGFPLKPGLNPES*SKGGCN Trigger: GTTACACCCGCCCTTGGATCAGCTCTCAGGGTTCAA...CCCAGGCTTGAGGGGAAAGCCATGTATCTGAAATATAGTATATTCTTGTAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
||
| CDS-3UTR CCA 90 bp | TATTTACAAGAATATACTATATTTCAGATACATGGCTTTCCCCTCAAGCCTGGGGCTGCCAGGTCTCTGTaGACACACGACTTGAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: YLQEYTIFQIHGFPLKPGAARSL*THDLNS Trigger: GGAGTTCAAGTCGTGTGTCCACAGAGACCTGGCAGC...CCCAGGCTTGAGGGGAAAGCCATGTATCTGAAATATAGTATATTCTTGTAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
||
| CDS-3UTR CCA 90 bp | TATTTACAAGAATATACTATATTTCAGATACATGGCTTTCCCCTCAAGCCTGGGTTCACGATGTTGTCATaGTGTCCCAGGTGGGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: YLQEYTIFQIHGFPLKPGFTMLS*CPRWVI Trigger: GATGACCCACCTGGGACACCATGACAACATCGTGAA...CCCAGGCTTGAGGGGAAAGCCATGTATCTGAAATATAGTATATTCTTGTAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
||
| CDS-3UTR TCA 90 bp | TATTTACAAGAATATACTATATTTCAGATACATGGCTTTCCCCTCAAGCCTGGGAGGGTTCACACCCAGTaGAAATATCTCCCAGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: YLQEYTIFQIHGFPLKPGRVHTQ*KYLPEK Trigger: CTTCTCTGGGAGATATTTTCACTGGGTGTGAACCCT...CCCAGGCTTGAGGGGAAAGCCATGTATCTGAAATATAGTATATTCTTGTAAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
||
| CDS-3UTR TCA 90 bp | GTATTTACAAGAATATACTATATTTCAGATACATGGCTTTCCCCTCAAGCCTGGTCTGCCTCTGCCAGCTaGCATCCTAAAAATGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: VFTRIYYISDTWLSPQAWSASAS*HPKNEV Trigger: GACTTCATTTTTAGGATGTCAGCTGGCAGAGGCAGA...CCAGGCTTGAGGGGAAAGCCATGTATCTGAAATATAGTATATTCTTGTAAATAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
||
| CDS-3UTR TCA 90 bp | TATTTACAAGAATATACTATATTTCAGATACATGGCTTTCCCCTCAAGCCTGGGTACTTCTTAGGTAGTTaGGGAGGTCACCATAGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: YLQEYTIFQIHGFPLKPGYFLGS*GGHHSN Trigger: GTTGCTATGGTGACCTCCTCAACTACCTAAGAAGTA...CCCAGGCTTGAGGGGAAAGCCATGTATCTGAAATATAGTATATTCTTGTAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
||
| CDS-3UTR CCA 90 bp | GTATTTACAAGAATATACTATATTTCAGATACATGGCTTTCCCCTCAAGCCTGGATCACAGGCAGGTCTTaGTTTGTAACGGTCTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VFTRIYYISDTWLSPQAWITGRS*FVTVSR Trigger: TCTTGAGACCGTTACAAACCAAGACCTGCCTGTGAT...CCAGGCTTGAGGGGAAAGCCATGTATCTGAAATATAGTATATTCTTGTAAATAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
||
| CDS-3UTR CCA 90 bp | GTATTTACAAGAATATACTATATTTCAGATACATGGCTTTCCCCTCAAGCCTGGAGTATATCCCTTCTGTaGCATAGAATGGCTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VFTRIYYISDTWLSPQAWSISLL*HRMAAP Trigger: TGGAGCAGCCATTCTATGCCACAGAAGGGATATACT...CCAGGCTTGAGGGGAAAGCCATGTATCTGAAATATAGTATATTCTTGTAAATAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
||
| CDS-3UTR CCA 90 bp | TATTTACAAGAATATACTATATTTCAGATACATGGCTTTCCCCTCAAGCCTGGGCGTTCAAGATGGCCATaGAAACGATTCCTCTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: YLQEYTIFQIHGFPLKPGRSRWP*KRFLCF Trigger: AAAACAGAGGAATCGTTTCCATGGCCATCTTGAACG...CCCAGGCTTGAGGGGAAAGCCATGTATCTGAAATATAGTATATTCTTGTAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
||
| CDS-3UTR GCA 90 bp | GTATTTACAAGAATATACTATATTTCAGATACATGGCTTTCCCCTCAAGCCTGGGGCGTCATCATTTTCTaGATAGAATATGTACTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VFTRIYYISDTWLSPQAWGVIIF*IEYVLS Trigger: GGAGAGTACATATTCTATGCAGAAAATGATGACGCC...CCAGGCTTGAGGGGAAAGCCATGTATCTGAAATATAGTATATTCTTGTAAATAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
||
| CDS-3UTR GCA 90 bp | TATTTACAAGAATATACTATATTTCAGATACATGGCTTTCCCCTCAAGCCTGGGAAAGCCCAGCAGGATTaGATTACAAAGTATATCCCT | + |
|
Preference number: 4 (lower is better) Translates to: YLQEYTIFQIHGFPLKPGKAQQD*ITKYIP Trigger: AGGGATATACTTTGTAATGCAATCCTGCTGGGCTTT...CCCAGGCTTGAGGGGAAAGCCATGTATCTGAAATATAGTATATTCTTGTAAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
||
| CDS-3UTR CCA 90 bp | GTATTTACAAGAATATACTATATTTCAGATACATGGCTTTCCCCTCAAGCCTGGTGCTTTTTGTATTTGTaGCAGATCAACACAATGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VFTRIYYISDTWLSPQAWCFLYL*QINTMR Trigger: TCTCATTGTGTTGATCTGCCACAAATACAAAAAGCA...CCAGGCTTGAGGGGAAAGCCATGTATCTGAAATATAGTATATTCTTGTAAATAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
||
| CDS GCA 90 bp | AAGACCCAGAGGCAGGAAAGGTCCCCTGGGGTGGCGAGCTGCACTTaGAGGGTGATGGACCCAGACTCGGCCACCTCCACGGTGGCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: KTQRQERSPGVASCT*RVMDPDSATSTVAA Trigger: AGCGGCCACCGTGGAGGTGGCCGAGTCTGGGTCCATCACCCTGCAAGTGCAGCTCGCCACCCCAGGGGACCTTTCCTGCCTCTGGGTCTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
||
| CDS GCA 90 bp | TGCTTAAAGACCCAGAGGCAGGAAAGGTCCCCTGGGGTGGCGAGCTaGACTTGCAGGGTGATGGACCCAGACTCGGCCACCTCCACGGTG | + |
|
Preference number: 5 (lower is better) Translates to: CLKTQRQERSPGVAS*TCRVMDPDSATSTV Trigger: CACCGTGGAGGTGGCCGAGTCTGGGTCCATCACCCTGCAAGTGCAGCTCGCCACCCCAGGGGACCTTTCCTGCCTCTGGGTCTTTAAGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
||
| CDS CCA 90 bp | GCTTTCCCTGTGGGAGCTGCAGAGCACCCACTCCACAGTGGGCTCTaGAACACCCTCGGAGATGCAGAGCAGTGCGTCCTGGTTTTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: AFPVGAAEHPLHSGL*NTLGDAEQCVLVFH Trigger: ATGGAAAACCAGGACGCACTGCTCTGCATCTCCGAGGGTGTTCCAGAGCCCACTGTGGAGTGGGTGCTCTGCAGCTCCCACAGGGAAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
||
| CDS CCA 90 bp | CTTTACAGCTTTCCCTGTGGGAGCTGCAGAGCACCCACTCCACAGTaGGCTCTGGAACACCCTCGGAGATGCAGAGCAGTGCGTCCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: LYSFPCGSCRAPTPQ*ALEHPRRCRAVRPG Trigger: ACCAGGACGCACTGCTCTGCATCTCCGAGGGTGTTCCAGAGCCCACTGTGGAGTGGGTGCTCTGCAGCTCCCACAGGGAAAGCTGTAAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
||
| CDS CCA 90 bp | TCCTCCAGGGCTTTGTCTTCCAGCTCCCAGGTGAGCCCGAATCCATaGTTCACATGGATGGCCTTACACCTGATCCACAAGGGTTCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: SSRALSSSSQVSPNP*FTWMALHLIHKGSP Trigger: GGGGGAACCCTTGTGGATCAGGTGTAAGGCCATCCATGTGAACCATGGATTCGGGCTCACCTGGGAGCTGGAAGACAAAGCCCTGGAGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
||
| CDS-3UTR CAA 90 bp | GGCAGACAGCATCTAGAGAAAAGTCCAGCGAAGCAACGGCCTGTAGGGCGCTTCGAGGGGCCGCCTGTTTaGGTAGATGGATGGATGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GRQHLEKSPAKQRPVGRFEGPPV*VDGWMF Trigger: GAACATCCATCCATCTACCAAAACAGGCGGCCCCTC...GAAGCGCCCTACAGGCCGTTGCTTCGCTGGACTTTTCTCTAGATGCTGTCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
||
| CDS CCA 90 bp | GCTTTGTCTTCCAGCTCCCAGGTGAGCCCGAATCCATGGTTCACATaGATGGCCTTACACCTGATCCACAAGGGTTCCCCCACTTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ALSSSSQVSPNPWFT*MALHLIHKGSPTFR Trigger: CCTGAAAGTGGGGGAACCCTTGTGGATCAGGTGTAAGGCCATCCATGTGAACCATGGATTCGGGCTCACCTGGGAGCTGGAAGACAAAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
||
| CDS-3UTR CAA 90 bp | TGGAGTAATGGCAGACAGCATCTAGAGAAAAGTCCAGCGAAGCAACGGCCTGTACCCTCCTCCAGGGCTTaGTCTTCCAGCTCCCAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: WSNGRQHLEKSPAKQRPVPSSRA*SSSSQV Trigger: CACCTGGGAGCTGGAAGACAAAGCCCTGGAGGAGGG...TACAGGCCGTTGCTTCGCTGGACTTTTCTCTAGATGCTGTCTGCCATTACTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
||
| CDS-3UTR CAA 90 bp | GGCAGACAGCATCTAGAGAAAAGTCCAGCGAAGCAACGGCCTGTAGGGCGCTTCGAAGGAGATGTTGTCTaGGATGAAAGGGAAGGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GRQHLEKSPAKQRPVGRFEGDVV*DEREGA Trigger: GGCCCCTTCCCTTTCATCCAAGACAACATCTCCTTC...GAAGCGCCCTACAGGCCGTTGCTTCGCTGGACTTTTCTCTAGATGCTGTCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
||
| CDS-3UTR CAA 90 bp | CCCCAGGGTAGGCGGGCTCACCAACAAGTCTCATTATTGGCTCTCCCACCTGTGAGGTGGGTCATCATTTaGAGCTCCGACATGAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: PQGRRAHQQVSLLALPPVRWVII*SSDMRA Trigger: AGCTCTCATGTCGGAGCTCAAAATGATGACCCACCT...CACAGGTGGGAGAGCCAATAATGAGACTTGTTGGTGAGCCCGCCTACCCTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
||
| CDS TCA 90 bp | GATCACAGGCAGGTCTTGGTTTGTAACGGTCTCAAGAATCATTACTaGCAAAACAACAAGCAGCAGCAGCCGCCGGTCGCTGCGCTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: DHRQVLVCNGLKNHY*QNNKQQQPPVAALR Trigger: GCGCAGCGCAGCGACCGGCGGCTGCTGCTGCTTGTTGTTTTGTCAGTAATGATTCTTGAGACCGTTACAAACCAAGACCTGCCTGTGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
||
| CDS CCA 90 bp | CTCTCTGCTGAGGGGCCGCCTGTTTTGGTAGATGGATGGATGTTCTaGGACGTTGCCACCCATGTTCTGATACATCGCTTCTTCTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LSAEGPPVLVDGWMF*DVATHVLIHRFFCL Trigger: GAGGCAGAAGAAGCGATGTATCAGAACATGGGTGGCAACGTCCCAGAACATCCATCCATCTACCAAAACAGGCGGCCCCTCAGCAGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
||
| CDS-3UTR CAA 90 bp | GGCAGACAGCATCTAGAGAAAAGTCCAGCGAAGCAACGGCCTGTAGGGCGCTTCGATCACAGGCAGGTCTaGGTTTGTAACGGTCTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: GRQHLEKSPAKQRPVGRFDHRQV*VCNGLK Trigger: CTTGAGACCGTTACAAACCAAGACCTGCCTGTGATC...GAAGCGCCCTACAGGCCGTTGCTTCGCTGGACTTTTCTCTAGATGCTGTCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
||
| CDS TCA 90 bp | AGATATGCTGTACCCATCCTCCAGGCCTCTCTGTTCACAAGGAAATaGGGCTTGAGAGAAGATCCACGTGCATCGGATTCGTGGGTACGC | + |
|
Preference number: 5 (lower is better) Translates to: RYAVPILQASLFTRK*GLREDPRASDSWVR Trigger: GCGTACCCACGAATCCGATGCACGTGGATCTTCTCTCAAGCCTCATTTCCTTGTGAACAGAGAGGCCTGGAGGATGGGTACAGCATATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
||
| CDS-3UTR CAA 90 bp | GGTAGGCGGGCTCACCAACAAGTCTCATTATTGGCTCTCCCACCTGTGCGAGGACTGATTAAAACACACTaGATCACAGGCAGGTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: GRRAHQQVSLLALPPVRGLIKTH*ITGRSW Trigger: CCAAGACCTGCCTGTGATCAAGTGTGTTTTAATCAG...TCCTCGCACAGGTGGGAGAGCCAATAATGAGACTTGTTGGTGAGCCCGCCTACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
||
| CDS-3UTR CAA 90 bp | TCACCAACAAGTCTCATTATTGGCTCTCCCACCTGTGCGAGGAGAGGTTTGATTAGGATGGCCGCTTCCTaGAGTCAAAAGCCCAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SPTSLIIGSPTCARRGLIRMAAS*SQKPSR Trigger: CCTGCTGGGCTTTTGACTCAAGGAAGCGGCCATCCT...AATCAAACCTCTCCTCGCACAGGTGGGAGAGCCAATAATGAGACTTGTTGGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
||
| CDS CCA 90 bp | CGGAAGACACAAAGGCCAAGAGAATCCGAATCATGGTCCTGTTTGTaGAGTAGGTACTCATCTCAAAGTAGCTGCCCTCCTCCAGGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: RKTQRPRESESWSCL*SRYSSQSSCPPPGL Trigger: AAGCCCTGGAGGAGGGCAGCTACTTTGAGATGAGTACCTACTCCACAAACAGGACCATGATTCGGATTCTCTTGGCCTTTGTGTCTTCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
||
| CDS CCA 90 bp | TCCAAGAGGGTAGCGGGTAGCCATCAGAGGAACAGGACGCCTGGCTaGCTGAGGCATTTGCTAGCACTTGAGGTTTCTTTCTTATATTCA | + |
|
Preference number: 5 (lower is better) Translates to: SKRVAGSHQRNRTPG*LRHLLALEVSFLYS Trigger: TGAATATAAGAAAGAAACCTCAAGTGCTAGCAAATGCCTCAGCCAGCCAGGCGTCCTGTTCCTCTGATGGCTACCCGCTACCCTCTTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
||
| CDS CCA 90 bp | CTTCTTCTGCCTCTGCCAGCTGACATCCTAAAAATGAAGTCAGGTTaGGGAAGGATGGCCGCTTCCTTGAGTCAAAAGCCCAGCAGGATT | + |
|
Preference number: 5 (lower is better) Translates to: LLLPLPADILKMKSG*GRMAASLSQKPSRI Trigger: AATCCTGCTGGGCTTTTGACTCAAGGAAGCGGCCATCCTTCCCCAACCTGACTTCATTTTTAGGATGTCAGCTGGCAGAGGCAGAAGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
||
| CDS-3UTR CAA 90 bp | CCCCAGGGTAGGCGGGCTCACCAACAAGTCTCATTATTGGCTCTCCCACCTGTGAATTTCATACTCTTCTaGCGAGCTGGTAGCGTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: PQGRRAHQQVSLLALPPVNFILF*RAGSVY Trigger: ATAAACGCTACCAGCTCGCAAGAAGAGTATGAAATT...CACAGGTGGGAGAGCCAATAATGAGACTTGTTGGTGAGCCCGCCTACCCTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
||
| CDS CCA 90 bp | CGTTCCTTCCCACGGAAGACACAAAGGCCAAGAGAATCCGAATCATaGTCCTGTTTGTGGAGTAGGTACTCATCTCAAAGTAGCTGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: RSFPRKTQRPRESES*SCLWSRYSSQSSCP Trigger: AGGGCAGCTACTTTGAGATGAGTACCTACTCCACAAACAGGACCATGATTCGGATTCTCTTGGCCTTTGTGTCTTCCGTGGGAAGGAACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
||
| CDS-3UTR CAA 90 bp | TCACCAACAAGTCTCATTATTGGCTCTCCCACCTGTGCGAGGAGAGGTTTGATTGGCTGGCTGAGGCATTaGCTAGCACTTGAGGTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SPTSLIIGSPTCARRGLIGWLRH*LALEVS Trigger: AGAAACCTCAAGTGCTAGCAAATGCCTCAGCCAGCC...AATCAAACCTCTCCTCGCACAGGTGGGAGAGCCAATAATGAGACTTGTTGGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
||
| CDS-3UTR CAA 90 bp | TCACCAACAAGTCTCATTATTGGCTCTCCCACCTGTGCGAGGAGAGGTTTGATTAGCAGATTCACGATGTaGTCATGGTGTCCCAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SPTSLIIGSPTCARRGLISRFTM*SWCPRW Trigger: CCACCTGGGACACCATGACAACATCGTGAATCTGCT...AATCAAACCTCTCCTCGCACAGGTGGGAGAGCCAATAATGAGACTTGTTGGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
||
| CDS CCA 90 bp | TGGACACACGACTTGAACTCCAGGAATTCCATGCCTTTGGCCACTTaGTACGCAAAGCAAAGGAGGTCTTCAAACGTCAGCACGTTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: WTHDLNSRNSMPLAT*YAKQRRSSNVSTFK Trigger: TTTGAACGTGCTGACGTTTGAAGACCTCCTTTGCTTTGCGTACCAAGTGGCCAAAGGCATGGAATTCCTGGAGTTCAAGTCGTGTGTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
||
| CDS-3UTR CAA 90 bp | TGGAGTAATGGCAGACAGCATCTAGAGAAAAGTCCAGCGAAGCAACGGCCTGTATTCAGCGTGAACATTTaGGTGAACTGGGCGTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: WSNGRQHLEKSPAKQRPVFSVNI*VNWASS Trigger: TGATGACGCCCAGTTCACCAAAATGTTCACGCTGAA...TACAGGCCGTTGCTTCGCTGGACTTTTCTCTAGATGCTGTCTGCCATTACTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
||
| CDS-3UTR CAA 90 bp | TGGAGTAATGGCAGACAGCATCTAGAGAAAAGTCCAGCGAAGCAACGGCCTGTAGTGCAATTGGGAGATTaGTCCGAACACTTCTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: WSNGRQHLEKSPAKQRPVVQLGD*SEHFFQ Trigger: CTGGAAGAAGTGTTCGGACAAATCTCCCAATTGCAC...TACAGGCCGTTGCTTCGCTGGACTTTTCTCTAGATGCTGTCTGCCATTACTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
||
| CDS-3UTR CAA 90 bp | TCACCAACAAGTCTCATTATTGGCTCTCCCACCTGTGCGAGGAGAGGTTTGATTCTGTGGACACACGACTaGAACTCCAGGAATTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: SPTSLIIGSPTCARRGLILWTHD*NSRNSM Trigger: CATGGAATTCCTGGAGTTCAAGTCGTGTGTCCACAG...AATCAAACCTCTCCTCGCACAGGTGGGAGAGCCAATAATGAGACTTGTTGGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
||
| CDS TCA 90 bp | AAGTACTCGTTATCCAGGGGGCCAGTCACCTGGATCATCTGCAGCTaGCTCTCGTACCTAAATTGCTTTTTGTATTTGTGGCAGATCAAC | + |
|
Preference number: 5 (lower is better) Translates to: KYSLSRGPVTWIICS*LSYLNCFLYLWQIN Trigger: GTTGATCTGCCACAAATACAAAAAGCAATTTAGGTACGAGAGTCAGCTGCAGATGATCCAGGTGACTGGCCCCCTGGATAACGAGTACTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
||
| CDS CCA 90 bp | TATGGAGTAGGTATTCTCCTGCCTGGGTCTCTGTCACGTTCAAGATaGCCATGGAAACGATTCCTCTGTTTTGTAAATCAAAGTGCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: YGVGILLPGSLSRSR*PWKRFLCFVNQSAA Trigger: AGCCGCACTTTGATTTACAAAACAGAGGAATCGTTTCCATGGCCATCTTGAACGTGACAGAGACCCAGGCAGGAGAATACCTACTCCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
||
| CDS TCA 90 bp | AGTGCATTTCTAGCACAGCATCTGATGTCTGTTCCGAACAACTCATaGAGTACCTTTTCCTCCTTTCTGACAACAGCAGGGCCTTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SAFLAQHLMSVPNNS*STFSSFLTTAGPSS Trigger: AGAAGAAGGCCCTGCTGTTGTCAGAAAGGAGGAAAAGGTACTTCATGAGTTGTTCGGAACAGACATCAGATGCTGTGCTAGAAATGCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
||
| CDS TCA 90 bp | GAAGATCCACGTGCATCGGATTCGTGGGTACGCTTTAAACCTGACTaGGAAGCAGAACTTTTCGTACGGGTCAATTTCATACTCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: EDPRASDSWVRFKPD*EAELFVRVNFILFL Trigger: CAAGAAGAGTATGAAATTGACCCGTACGAAAAGTTCTGCTTCTCAGTCAGGTTTAAAGCGTACCCACGAATCCGATGCACGTGGATCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS CCA 90 bp | CCTTTCCCGGCCTCACTCATATTTAGAGTACTGCTCGACACCCACTaGCCAAACACTTTTCTGTTAGCCTTTTTATTCCAAACTCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: PFPASLIFRVLLDTH*PNTFLLAFLFQTPS Trigger: AGAAGGAGTTTGGAATAAAAAGGCTAACAGAAAAGTGTTTGGCCAGTGGGTGTCGAGCAGTACTCTAAATATGAGTGAGGCCGGGAAAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS-3UTR CAA 90 bp | TCACCAACAAGTCTCATTATTGGCTCTCCCACCTGTGCGAGGAGAGGTTTGATTAAAAGCCCAGCAGGATaGCATTACAAAGTATATCCC | + |
|
Preference number: 5 (lower is better) Translates to: SPTSLIIGSPTCARRGLIKSPAG*HYKVYP Trigger: GGGATATACTTTGTAATGCAATCCTGCTGGGCTTTT...AATCAAACCTCTCCTCGCACAGGTGGGAGAGCCAATAATGAGACTTGTTGGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS TCA 90 bp | AAGGTCTTCTTAGCACGTACAGCTGTGTATCTCTTACATTCACTGTaGACAGTACTGTGTAGTTGGCGGCTTCGCTCTGAATATGGAGTA | + |
|
Preference number: 5 (lower is better) Translates to: KVFLARTAVYLLHSL*TVLCSWRLRSEYGV Trigger: TACTCCATATTCAGAGCGAAGCCGCCAACTACACAGTACTGTTCACAGTGAATGTAAGAGATACACAGCTGTACGTGCTAAGAAGACCTT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS-3UTR CAA 90 bp | TGGAGTAATGGCAGACAGCATCTAGAGAAAAGTCCAGCGAAGCAACGGCCTGTAACTCTCGTACCTAAATaGCTTTTTGTATTTGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: WSNGRQHLEKSPAKQRPVTLVPK*LFVFVA Trigger: TGCCACAAATACAAAAAGCAATTTAGGTACGAGAGT...TACAGGCCGTTGCTTCGCTGGACTTTTCTCTAGATGCTGTCTGCCATTACTCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS GCA 90 bp | ACTGAGAAGCAGAACTTTTCGTACGGGTCAATTTCATACTCTTCTTaGGAGCTGGTAGCGTTTATAAACCCTTTTTCTAGGATGGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: TEKQNFSYGSISYSS*ELVAFINPFSRMVT Trigger: GGTGACCATCCTAGAAAAAGGGTTTATAAACGCTACCAGCTCGCAAGAAGAGTATGAAATTGACCCGTACGAAAAGTTCTGCTTCTCAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS CCA 90 bp | CTGGCCAAACACTTTTCTGTTAGCCTTTTTATTCCAAACTCCTTCTaGGATTTCCTCCGTGCAATTGGGAGATTTGTCCGAACACTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LAKHFSVSLFIPNSF*DFLRAIGRFVRTLL Trigger: AAGAAGTGTTCGGACAAATCTCCCAATTGCACGGAGGAAATCCCAGAAGGAGTTTGGAATAAAAAGGCTAACAGAAAAGTGTTTGGCCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS-3UTR CAA 90 bp | TATTTACAAGAATATACTATATTTCAGATACATGGCTTTCCCCTCAAGCCTGGGTTGTACGCACAGCATTaGACCAGAAGCCCTTTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: YLQEYTIFQIHGFPLKPGLYAQH*TRSPFP Trigger: CGGGAAAGGGCTTCTGGTCAAATGCTGTGCGTACAA...CCCAGGCTTGAGGGGAAAGCCATGTATCTGAAATATAGTATATTCTTGTAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
||
| CDS-3UTR CAA 90 bp | GTATTTACAAGAATATACTATATTTCAGATACATGGCTTTCCCCTCAAGCCTGGCATGCCTTTGGCCACTaGGTACGCAAAGCAAAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: VFTRIYYISDTWLSPQAWHAFGH*VRKAKE Trigger: CTCCTTTGCTTTGCGTACCAAGTGGCCAAAGGCATG...CCAGGCTTGAGGGGAAAGCCATGTATCTGAAATATAGTATATTCTTGTAAATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS TCA 90 bp | GGTTTTCATATTCAATCTCATCTTCAGAATGAATTAAATTCCCATTaGACCCTGAGAGCTGATCCAAGGGCGGGTGTAACTGAACTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: GFHIQSHLQNELNSH*TLRADPRAGVTELL Trigger: GAGAAGTTCAGTTACACCCGCCCTTGGATCAGCTCTCAGGGTTCAATGGGAATTTAATTCATTCTGAAGATGAGATTGAATATGAAAACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
||
| CDS-3UTR CAA 90 bp | GTATTTACAAGAATATACTATATTTCAGATACATGGCTTTCCCCTCAAGCCTGGGAATCATGGTCCTGTTaGTGGAGTAGGTACTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: VFTRIYYISDTWLSPQAWESWSC*WSRYSS Trigger: AGATGAGTACCTACTCCACAAACAGGACCATGATTC...CCAGGCTTGAGGGGAAAGCCATGTATCTGAAATATAGTATATTCTTGTAAATAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS GCA 90 bp | TATATTCAGCGTGAACATTTTGGTGAACTGGGCGTCATCATTTTCTaGATAGAATATGTACTCTCCTGGCTTGTTCTTATGATCGCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: YIQREHFGELGVIIF*IEYVLSWLVLMIAK Trigger: TTTTGCGATCATAAGAACAAGCCAGGAGAGTACATATTCTATGCAGAAAATGATGACGCCCAGTTCACCAAAATGTTCACGCTGAATATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS CAA 90 bp | AAAGACCCAGAGGCAGGAAAGGTCCCCTGGGGTGGCGAGCTGCACTaGCAGGGTGATGGACCCAGACTCGGCCACCTCCACGGTGGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: KDPEAGKVPWGGELH*QGDGPRLGHLHGGR Trigger: GCGGCCACCGTGGAGGTGGCCGAGTCTGGGTCCATCACCCTGCAAGTGCAGCTCGCCACCCCAGGGGACCTTTCCTGCCTCTGGGTCTTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS GCA 72 bp | ACCCAGAGGCAGGAAAGGTCCCCTGGGGTGGCGAGCTaGACTTGCAGGGTGATGGACCCAGACTCGGCCACC | + |
|
Preference number: 6 (lower is better) Translates to: TQRQERSPGVAS*TCRVMDPDSAT Trigger: GGTGGCCGAGTCTGGGTCCATCACCCTGCAAGTGCAGCTCGCCACCCCAGGGGACCTTTCCTGCCTCTGGGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS TCA 72 bp | GTGCCATCCACTTCACCGGCAGCCGTGCGTTGCCCCTaGCGACGTAGCTGGAGTCGCTCAGGATGTCTCGGG | + |
|
Preference number: 6 (lower is better) Translates to: VPSTSPAAVRCP*RRSWSRSGCLG Trigger: CCCGAGACATCCTGAGCGACTCCAGCTACGTCGTCAGGGGCAACGCACGGCTGCCGGTGAAGTGGATGGCAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS CCA 72 bp | GTGGGAGCTGCAGAGCACCCACTCCACAGTGGGCTCTaGAACACCCTCGGAGATGCAGAGCAGTGCGTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: VGAAEHPLHSGL*NTLGDAEQCVL Trigger: CAGGACGCACTGCTCTGCATCTCCGAGGGTGTTCCAGAGCCCACTGTGGAGTGGGTGCTCTGCAGCTCCCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS TCA 72 bp | CCTGTGGCGATGGCGGCTCTGAGCCTGCCTCTCTGCTaGGGGGCCGCCTGTTTTGGTAGATGGATGGATGTT | + |
|
Preference number: 6 (lower is better) Translates to: PVAMAALSLPLC*GAACFGRWMDV Trigger: AACATCCATCCATCTACCAAAACAGGCGGCCCCTCAGCAGAGAGGCAGGCTCAGAGCCGCCATCGCCACAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
||
| CDS CCA 72 bp | TTTCCCTGTGGGAGCTGCAGAGCACCCACTCCACAGTaGGCTCTGGAACACCCTCGGAGATGCAGAGCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: FPCGSCRAPTPQ*ALEHPRRCRAV Trigger: CACTGCTCTGCATCTCCGAGGGTGTTCCAGAGCCCACTGTGGAGTGGGTGCTCTGCAGCTCCCACAGGGAAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS GCA 72 bp | CAGGGCCTTCTTCTTTACAGCTTTCCCTGTGGGAGCTaGAGAGCACCCACTCCACAGTGGGCTCTGGAACAC | + |
|
Preference number: 6 (lower is better) Translates to: QGLLLYSFPCGS*RAPTPQWALEH Trigger: GTGTTCCAGAGCCCACTGTGGAGTGGGTGCTCTGCAGCTCCCACAGGGAAAGCTGTAAAGAAGAAGGCCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS CCA 72 bp | TCCAGCTCCCAGGTGAGCCCGAATCCATGGTTCACATaGATGGCCTTACACCTGATCCACAAGGGTTCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: SSSQVSPNPWFT*MALHLIHKGSP Trigger: GGGGGAACCCTTGTGGATCAGGTGTAAGGCCATCCATGTGAACCATGGATTCGGGCTCACCTGGGAGCTGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS CCA 72 bp | GTAGCGGGTAGCCATCAGAGGAACAGGACGCCTGGCTaGCTGAGGCATTTGCTAGCACTTGAGGTTTCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: VAGSHQRNRTPG*LRHLLALEVSF Trigger: GAAAGAAACCTCAAGTGCTAGCAAATGCCTCAGCCAGCCAGGCGTCCTGTTCCTCTGATGGCTACCCGCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS TCA 72 bp | GCAGTGTGCTCTGAGGAGCCTGGTTTAGATCTATGGTaGACAGCTTGGTGCATTCGCGGCCCAGTGCATTTC | + |
|
Preference number: 6 (lower is better) Translates to: AVCSEEPGLDLW*TAWCIRGPVHF Trigger: GAAATGCACTGGGCCGCGAATGCACCAAGCTGTTCACCATAGATCTAAACCAGGCTCCTCAGAGCACACTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS CCA 72 bp | GCTTTGTCTTCCAGCTCCCAGGTGAGCCCGAATCCATaGTTCACATGGATGGCCTTACACCTGATCCACAAG | + |
|
Preference number: 6 (lower is better) Translates to: ALSSSSQVSPNP*FTWMALHLIHK Trigger: CTTGTGGATCAGGTGTAAGGCCATCCATGTGAACCATGGATTCGGGCTCACCTGGGAGCTGGAAGACAAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS CCA 72 bp | AGTGTGCATGCCCCCAGCAGATTCACGATGTTGTCATaGTGTCCCAGGTGGGTCATCATTTTGAGCTCCGAC | + |
|
Preference number: 6 (lower is better) Translates to: SVHAPSRFTMLS*CPRWVIILSSD Trigger: GTCGGAGCTCAAAATGATGACCCACCTGGGACACCATGACAACATCGTGAATCTGCTGGGGGCATGCACACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS CCA 72 bp | GAGGGGCCGCCTGTTTTGGTAGATGGATGGATGTTCTaGGACGTTGCCACCCATGTTCTGATACATCGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: EGPPVLVDGWMF*DVATHVLIHRF Trigger: GAAGCGATGTATCAGAACATGGGTGGCAACGTCCCAGAACATCCATCCATCTACCAAAACAGGCGGCCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS CCA 72 bp | CTCTCTGCTGAGGGGCCGCCTGTTTTGGTAGATGGATaGATGTTCTGGGACGTTGCCACCCATGTTCTGATA | + |
|
Preference number: 6 (lower is better) Translates to: LSAEGPPVLVDG*MFWDVATHVLI Trigger: TATCAGAACATGGGTGGCAACGTCCCAGAACATCCATCCATCTACCAAAACAGGCGGCCCCTCAGCAGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS CAA 72 bp | CCTGACAGTGTGCATGCCCCCAGCAGATTCACGATGTaGTCATGGTGTCCCAGGTGGGTCATCATTTTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: PDSVHAPSRFTM*SWCPRWVIILS Trigger: GCTCAAAATGATGACCCACCTGGGACACCATGACAACATCGTGAATCTGCTGGGGGCATGCACACTGTCAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS TCA 72 bp | TCCTCCAGGCCTCTCTGTTCACAAGGAAATGAGGCTTaGGAGAAGATCCACGTGCATCGGATTCGTGGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: SSRPLCSQGNEA*EKIHVHRIRGY Trigger: GTACCCACGAATCCGATGCACGTGGATCTTCTCTCAAGCCTCATTTCCTTGTGAACAGAGAGGCCTGGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS GCA 72 bp | AGTGGGCTCTGGAACACCCTCGGAGATGCAGAGCAGTaGGTCCTGGTTTTCCATCTTCCTAAAGTAAGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: SGLWNTLGDAEQ*VLVFHLPKVRS Trigger: AGACCTTACTTTAGGAAGATGGAAAACCAGGACGCACTGCTCTGCATCTCCGAGGGTGTTCCAGAGCCCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS CCA 72 bp | CCTCTGCCAGCTGACATCCTAAAAATGAAGTCAGGTTaGGGAAGGATGGCCGCTTCCTTGAGTCAAAAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: PLPADILKMKSG*GRMAASLSQKP Trigger: GGGCTTTTGACTCAAGGAAGCGGCCATCCTTCCCCAACCTGACTTCATTTTTAGGATGTCAGCTGGCAGAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS CAA 90 bp | CCACGGAAGACACAAAGGCCAAGAGAATCCGAATCATGGTCCTGTTaGTGGAGTAGGTACTCATCTCAAAGTAGCTGCCCTCCTCCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: PRKTQRPRESESWSC*WSRYSSQSSCPPPG Trigger: CCCTGGAGGAGGGCAGCTACTTTGAGATGAGTACCTACTCCACAAACAGGACCATGATTCGGATTCTCTTGGCCTTTGTGTCTTCCGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS CAA 90 bp | AGGTCTCTGTGGACACACGACTTGAACTCCAGGAATTCCATGCCTTaGGCCACTTGGTACGCAAAGCAAAGGAGGTCTTCAAACGTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RSLWTHDLNSRNSMP*ATWYAKQRRSSNVS Trigger: GCTGACGTTTGAAGACCTCCTTTGCTTTGCGTACCAAGTGGCCAAAGGCATGGAATTCCTGGAGTTCAAGTCGTGTGTCCACAGAGACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS TCA 72 bp | TCCCCCACTTTCAGGAATAACTGGGGCAGTGTGCTCTaGGGAGCCTGGTTTAGATCTATGGTGAACAGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SPTFRNNWGSVL*GAWFRSMVNSL Trigger: CAAGCTGTTCACCATAGATCTAAACCAGGCTCCTCAGAGCACACTGCCCCAGTTATTCCTGAAAGTGGGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS GCA 72 bp | GCCATGGAAACGATTCCTCTGTTTTGTAAATCAAAGTaGGGCTGGCAGCCCAGGGAGCTGTGCTTAAAGACC | + |
|
Preference number: 6 (lower is better) Translates to: AMETIPLFCKSK*GWQPRELCLKT Trigger: GGTCTTTAAGCACAGCTCCCTGGGCTGCCAGCCGCACTTTGATTTACAAAACAGAGGAATCGTTTCCATGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS CCA 72 bp | GAAACGATTCCTCTGTTTTGTAAATCAAAGTGCGGCTaGCAGCCCAGGGAGCTGTGCTTAAAGACCCAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: ETIPLFCKSKCG*QPRELCLKTQR Trigger: CCTCTGGGTCTTTAAGCACAGCTCCCTGGGCTGCCAGCCGCACTTTGATTTACAAAACAGAGGAATCGTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS CAA 72 bp | ACTCCTTCTGGGATTTCCTCCGTGCAATTGGGAGATTaGTCCGAACACTTCTTCCAGGTCCAAGAGGGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: TPSGISSVQLGD*SEHFFQVQEGS Trigger: GCTACCCTCTTGGACCTGGAAGAAGTGTTCGGACAAATCTCCCAATTGCACGGAGGAAATCCCAGAAGGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS CAA 90 bp | GTGGACACACGACTTGAACTCCAGGAATTCCATGCCTTTGGCCACTaGGTACGCAAAGCAAAGGAGGTCTTCAAACGTCAGCACGTTCAA | + |
|
Preference number: 6 (lower is better) Translates to: VDTRLELQEFHAFGH*VRKAKEVFKRQHVQ Trigger: TTGAACGTGCTGACGTTTGAAGACCTCCTTTGCTTTGCGTACCAAGTGGCCAAAGGCATGGAATTCCTGGAGTTCAAGTCGTGTGTCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS TCA 72 bp | CAGGTCTTGGTTTGTAACGGTCTCAAGAATCATTACTaGCAAAACAACAAGCAGCAGCAGCCGCCGGTCGCT | + |
|
Preference number: 6 (lower is better) Translates to: QVLVCNGLKNHY*QNNKQQQPPVA Trigger: AGCGACCGGCGGCTGCTGCTGCTTGTTGTTTTGTCAGTAATGATTCTTGAGACCGTTACAAACCAAGACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS GCA 72 bp | ATCTATGGTGAACAGCTTGGTGCATTCGCGGCCCAGTaGATTTCTAGCACAGCATCTGATGTCTGTTCCGAA | + |
|
Preference number: 6 (lower is better) Translates to: IYGEQLGAFAAQ*ISSTASDVCSE Trigger: TTCGGAACAGACATCAGATGCTGTGCTAGAAATGCACTGGGCCGCGAATGCACCAAGCTGTTCACCATAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS GCA 72 bp | GCCTGTTTTGGTAGATGGATGGATGTTCTGGGACGTTaGCACCCATGTTCTGATACATCGCTTCTTCTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: ACFGRWMDVLGR*HPCSDTSLLLP Trigger: AGGCAGAAGAAGCGATGTATCAGAACATGGGTGGCAACGTCCCAGAACATCCATCCATCTACCAAAACAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS CAA 72 bp | TCGCAAGACGTGCCCATAGAATTGTACGCACAGCATTaGACCAGAAGCCCTTTCCCGGCCTCACTCATATTT | + |
|
Preference number: 6 (lower is better) Translates to: SQDVPIELYAQH*TRSPFPASLIF Trigger: AAATATGAGTGAGGCCGGGAAAGGGCTTCTGGTCAAATGCTGTGCGTACAATTCTATGGGCACGTCTTGCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS CAA 72 bp | CGACTTGAACTCCAGGAATTCCATGCCTTTGGCCACTaGGTACGCAAAGCAAAGGAGGTCTTCAAACGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: RLELQEFHAFGH*VRKAKEVFKRQ Trigger: CTGACGTTTGAAGACCTCCTTTGCTTTGCGTACCAAGTGGCCAAAGGCATGGAATTCCTGGAGTTCAAGTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS CCA 72 bp | CAAAGGCCAAGAGAATCCGAATCATGGTCCTGTTTGTaGAGTAGGTACTCATCTCAAAGTAGCTGCCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: QRPRESESWSCL*SRYSSQSSCPP Trigger: AGGAGGGCAGCTACTTTGAGATGAGTACCTACTCCACAAACAGGACCATGATTCGGATTCTCTTGGCCTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS CAA 90 bp | AAGATGGTTTCGCAAGACGTGCCCATAGAATTGTACGCACAGCATTaGACCAGAAGCCCTTTCCCGGCCTCACTCATATTTAGAGTACTG | + |
|
Preference number: 6 (lower is better) Translates to: KMVSQDVPIELYAQH*TRSPFPASLIFRVL Trigger: CAGTACTCTAAATATGAGTGAGGCCGGGAAAGGGCTTCTGGTCAAATGCTGTGCGTACAATTCTATGGGCACGTCTTGCGAAACCATCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS CAA 90 bp | TTAGCCTTTTTATTCCAAACTCCTTCTGGGATTTCCTCCGTGCAATaGGGAGATTTGTCCGAACACTTCTTCCAGGTCCAAGAGGGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: LAFLFQTPSGISSVQ*GDLSEHFFQVQEGS Trigger: GCTACCCTCTTGGACCTGGAAGAAGTGTTCGGACAAATCTCCCAATTGCACGGAGGAAATCCCAGAAGGAGTTTGGAATAAAAAGGCTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS TCA 72 bp | CTAGCACAGCATCTGATGTCTGTTCCGAACAACTCATaGAGTACCTTTTCCTCCTTTCTGACAACAGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: LAQHLMSVPNNS*STFSSFLTTAG Trigger: CCCTGCTGTTGTCAGAAAGGAGGAAAAGGTACTTCATGAGTTGTTCGGAACAGACATCAGATGCTGTGCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS TCA 72 bp | TTATCCAGGGGGCCAGTCACCTGGATCATCTGCAGCTaGCTCTCGTACCTAAATTGCTTTTTGTATTTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: LSRGPVTWIICS*LSYLNCFLYLW Trigger: CCACAAATACAAAAAGCAATTTAGGTACGAGAGTCAGCTGCAGATGATCCAGGTGACTGGCCCCCTGGATAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS CCA 72 bp | CCACGGAAGACACAAAGGCCAAGAGAATCCGAATCATaGTCCTGTTTGTGGAGTAGGTACTCATCTCAAAGT | + |
|
Preference number: 6 (lower is better) Translates to: PRKTQRPRESES*SCLWSRYSSQS Trigger: ACTTTGAGATGAGTACCTACTCCACAAACAGGACCATGATTCGGATTCTCTTGGCCTTTGTGTCTTCCGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS CCA 72 bp | TATTCCAAACTCCTTCTGGGATTTCCTCCGTGCAATTaGGAGATTTGTCCGAACACTTCTTCCAGGTCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: YSKLLLGFPPCN*EICPNTSSRSK Trigger: CTTGGACCTGGAAGAAGTGTTCGGACAAATCTCCCAATTGCACGGAGGAAATCCCAGAAGGAGTTTGGAATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS CAA 72 bp | ACACAAAGGCCAAGAGAATCCGAATCATGGTCCTGTTaGTGGAGTAGGTACTCATCTCAAAGTAGCTGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: TQRPRESESWSC*WSRYSSQSSCP Trigger: AGGGCAGCTACTTTGAGATGAGTACCTACTCCACAAACAGGACCATGATTCGGATTCTCTTGGCCTTTGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS TCA 72 bp | TTAGCACGTACAGCTGTGTATCTCTTACATTCACTGTaGACAGTACTGTGTAGTTGGCGGCTTCGCTCTGAA | + |
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Preference number: 6 (lower is better) Translates to: LARTAVYLLHSL*TVLCSWRLRSE Trigger: TTCAGAGCGAAGCCGCCAACTACACAGTACTGTTCACAGTGAATGTAAGAGATACACAGCTGTACGTGCTAA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS TCA 72 bp | CGTGCATCGGATTCGTGGGTACGCTTTAAACCTGACTaGGAAGCAGAACTTTTCGTACGGGTCAATTTCATA | + |
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Preference number: 6 (lower is better) Translates to: RASDSWVRFKPD*EAELFVRVNFI Trigger: TATGAAATTGACCCGTACGAAAAGTTCTGCTTCTCAGTCAGGTTTAAAGCGTACCCACGAATCCGATGCACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS GCA 72 bp | CCTTTTTATTCCAAACTCCTTCTGGGATTTCCTCCGTaGAATTGGGAGATTTGTCCGAACACTTCTTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: PFYSKLLLGFPP*NWEICPNTSSR Trigger: CCTGGAAGAAGTGTTCGGACAAATCTCCCAATTGCACGGAGGAAATCCCAGAAGGAGTTTGGAATAAAAAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS CAA 72 bp | TTATTCCAAACTCCTTCTGGGATTTCCTCCGTGCAATaGGGAGATTTGTCCGAACACTTCTTCCAGGTCCAA | + |
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Preference number: 6 (lower is better) Translates to: LFQTPSGISSVQ*GDLSEHFFQVQ Trigger: TTGGACCTGGAAGAAGTGTTCGGACAAATCTCCCAATTGCACGGAGGAAATCCCAGAAGGAGTTTGGAATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS CAA 90 bp | GGGGCCAGTCACCTGGATCATCTGCAGCTGACTCTCGTACCTAAATaGCTTTTTGTATTTGTGGCAGATCAACACAATGAGAACAACAAT | + |
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Preference number: 6 (lower is better) Translates to: GASHLDHLQLTLVPK*LFVFVADQHNENNN Trigger: ATTGTTGTTCTCATTGTGTTGATCTGCCACAAATACAAAAAGCAATTTAGGTACGAGAGTCAGCTGCAGATGATCCAGGTGACTGGCCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS CCA 72 bp | GCCTCACTCATATTTAGAGTACTGCTCGACACCCACTaGCCAAACACTTTTCTGTTAGCCTTTTTATTCCAA | + |
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Preference number: 6 (lower is better) Translates to: ASLIFRVLLDTH*PNTFLLAFLFQ Trigger: TTGGAATAAAAAGGCTAACAGAAAAGTGTTTGGCCAGTGGGTGTCGAGCAGTACTCTAAATATGAGTGAGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS TCA 72 bp | ATTCAATCTCATCTTCAGAATGAATTAAATTCCCATTaGACCCTGAGAGCTGATCCAAGGGCGGGTGTAACT | + |
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Preference number: 6 (lower is better) Translates to: IQSHLQNELNSH*TLRADPRAGVT Trigger: AGTTACACCCGCCCTTGGATCAGCTCTCAGGGTTCAATGGGAATTTAATTCATTCTGAAGATGAGATTGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS GCA 72 bp | CAGAACTTTTCGTACGGGTCAATTTCATACTCTTCTTaGGAGCTGGTAGCGTTTATAAACCCTTTTTCTAGG | + |
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Preference number: 6 (lower is better) Translates to: QNFSYGSISYSS*ELVAFINPFSR Trigger: CCTAGAAAAAGGGTTTATAAACGCTACCAGCTCGCAAGAAGAGTATGAAATTGACCCGTACGAAAAGTTCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS GCA 72 bp | CGTGAACATTTTGGTGAACTGGGCGTCATCATTTTCTaGATAGAATATGTACTCTCCTGGCTTGTTCTTATG | + |
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Preference number: 6 (lower is better) Translates to: REHFGELGVIIF*IEYVLSWLVLM Trigger: CATAAGAACAAGCCAGGAGAGTACATATTCTATGCAGAAAATGATGACGCCCAGTTCACCAAAATGTTCACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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| CDS CCA 72 bp | TTGCATTACAAAGTATATCCCTTCTGTGGCATAGAATaGCTGCTCCATTTTAAATCCACTCTGAATCAGTTT | + |
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Preference number: 6 (lower is better) Translates to: LHYKVYPFCGIE*LLHFKSTLNQF Trigger: AAACTGATTCAGAGTGGATTTAAAATGGAGCAGCCATTCTATGCCACAGAAGGGATATACTTTGTAATGCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049324.13 |
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